Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002412.1

Orthogroup ID

OG0001610

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 4944

Gene Structure 4944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002412.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2083 bp

ggcaaagtcgtttgatatctgcatttcgatttcccggattcaaactcggagcccaaaatcccaagcggagctcggaattgtcagcctgaatatgcccggcgaagacatggaccaccgcaaagagagaatgaagagcgactgcaagaagatcatggacagcataaacgcaatgtgcttcgaaaacctgaacgacgagcaggtgcactcgctcgtgatgatgagggaaatcgcgcgcggagttgtggagaatcgagtcgggaaggtctccaacagcgacgtcaagaaggctctgtcttccagcattgagaagatggtggagtcgtgtagggatgtggtgaacatattgggcaggatttcgtgtgagggattaggcgaggaggagtttcagaagctcgtgaggatgaaggagattgcaatggggattgtgttgaaacgatccacggccgtggccgccttgggtggtgaacaacaggctgatggaggcgatgaatttggaagtgagaaggatatgtacagtgggggagtggaacttgagtcgaggagtgaagatgatcagaatgagatgcggcagggcgttgtggatggggagacacacacgtggaatgggtatgtaccgattattgaaggggcgggagaagagaggaagatggtggaggattatcatgaagtggtttcaagagatgaagatgcttggaatgtggggcggggaagtgtggttgaggggatgagggatgctggccatcaggagcagagtaggagggtagaagggttgatgtttgaagatgactgccttgtggtggtatcggagtttgaaactcaagatgtcaaaagtgaggtgcaaaaatcttggtcacgggaaacccctcagatccctattccatggccttcagatgacgtgataaacttagagtgggtgcagcacatgatgtttaatattgagcagtcttcgtatggtggtgagtcaccaatgagattttgtgatttaattccagtttctttggtggataaattaatcgacacagctacaagtatcctttgcaaggagccaaattgtgtgcaagttgattgccaaggagaggattcaagagttgttgtagttggcgacatttatggacagttccatgatttactgcatctctttgaacatgccgggttgccctctgacaaccagttgtatgtttttaatggaaattatgttgacagaggagcacggggcttggatgtctttctcgtcttgctggcttggaaggtcttgatgcccagtagagtatatctactccgtggaaaccatgaatctagatattgtacattactgtatggttttgaggaggaggtcaagactaaatttggtgatcatggtgaatatgtctataataaatgcctcgactgctttaaagagcttcctctggcttcagtcatagccaattctgtatataccacacatggaggtcttttccggagtagtacctcttcgagaaagtcaaaaagaaagagggaggaaagccttgaactgggttctctagaagatttatctaaagttaaaagatctcttatagatgcgcctgatgtaggtccgaatgtattactcactgacttactatggtcagatccatcaaaggaagatggtctagttgaaaagacatttcgagaacgaggtctttggtggggtcctgactgcactgaggcttttctaaaacaatccaacttgaaggctgatgctgatggcgataacgatctggtcattgttgataaaccaggctcagtaacagcgtctgcaactggtgccgcttctttgtctctagcttctgttagttctgaggttgacttcaagacgttaggcatttctaaccccccttcttcaagtgttatgatgggggatggtgcaggcggcactgaacttgtccaagttccgaaggctcctgtggtagaaggattgcctctgccttcggagttgcaggagcctcacaaggctgcgtacaagtacttcttggagcttattgctggcctgaagcatatggtttcaacaagggaggttcagacccggcccatgaatgagccatgcaaaagtgagctcgacatctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 map04010

Pfam Domains

Protein Families

Metallophos

Protein Analysis

693

Amino Acids

76.96

Weight (kDa)

4.84

Isoelectric Point (pI)

42.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001610)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720
malus_domestica	MD09G1191500.v1.1
prunus_persica	Prupe.3G047600_v2.0.a1
pyrus_communis	pycom09g10800
rosa_chinensis	RchiOBHm_Chr2g0143611
rosa_laevigata	RLG00000020051 RLG00000033709
rosa_multiflora	Rmu_co8237331.1_g000001 Rmu_sc0002412.1_g000001 Rmu_sc0004340.1_g000029 Rmu_sc0031780.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101600 Rroxscaffold_4G00304410
rosa_rugosa	Rorug02G0384400 Rorug02G0384400 Rorug02G0384400 Rorug02G0384400
rosa_samantha	Rh1BG199600 Rh1DG227400 Rh2AG436200 Rh2BG443800 Rh2CG422400 Rh2DG454200
rosa_wichuraiana	Rw2G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	188
AatII	GACGTC	1 cut(s)	280
Acc36I	ACCTGC	1 cut(s)	188
AccB1I	GGYRCC	1 cut(s)	1782
AccII	CGCG	3 cut(s)	231, 233, 235
AccIII	TCCGGA	1 cut(s)	1456
AciI	CCGC	9 cut(s)	66, 116, 235, 451, 566, 630, 704, 1786, 1888
AclWI	GGATC	3 cut(s)	430, 863, 1602
AcoI	YGGCCR	3 cut(s)	442, 448, 737
AcsI	RAATTY	2 cut(s)	489, 1344
AcuI	CTGAAG	3 cut(s)	871, 1396, 2028
AcvI	CACGTG	1 cut(s)	598
AcyI	GRCGYC	1 cut(s)	277
AfaI	GTAC	6 cut(s)	513, 613, 1307, 1466, 1977, 1983
AfiI	CCNNNNNNNGG	5 cut(s)	797, 1040, 1076, 1511, 1569
AflIII	ACRYGT	1 cut(s)	595
AjiI	CACGTC	1 cut(s)	896
AjnI	CCWGG	1 cut(s)	1754
AleI	CACNNNNGTG	2 cut(s)	444, 596
AluBI	AGCT	7 cut(s)	71, 392, 1023, 1400, 1803, 1994, 2072
AluI	AGCT	7 cut(s)	71, 392, 1023, 1400, 1803, 1994, 2072
Alw21I	GWGCWC	4 cut(s)	73, 205, 1211, 2074
Alw26I	GTCTC	3 cut(s)	269, 582, 1801
Alw44I	GTGCAC	1 cut(s)	201
AlwI	GGATC	3 cut(s)	430, 863, 1602
AlwNI	CAGNNNCTG	1 cut(s)	1773
Aor13HI	TCCGGA	1 cut(s)	1456
AoxI	GGCC	6 cut(s)	442, 448, 737, 882, 2003, 2043
ApaLI	GTGCAC	1 cut(s)	201
ApeKI	GCWGC	2 cut(s)	917, 1971
ApoI	RAATTY	2 cut(s)	489, 1344
AseI	ATTAAT	1 cut(s)	1011
AspLEI	GCGC	3 cut(s)	233, 235, 1562
AspS9I	GGNCC	4 cut(s)	110, 1572, 1668, 2044
AsuC2I	CCSGG	4 cut(s)	35, 97, 1151, 2042
AsuHPI	GGTGA	6 cut(s)	347, 474, 955, 969, 1362, 1371
AsuII	TTCGAA	1 cut(s)	178
AvaII	GGWCC	3 cut(s)	110, 1572, 1668
BaeGI	GKGCMC	1 cut(s)	205
BalI	TGGCCA	1 cut(s)	739
BanI	GGYRCC	1 cut(s)	1782
BanII	GRGCYC	3 cut(s)	54, 73, 2074
BarI	GAAGNNNNNNTAC	6 cut(s)	495, 527, 1454, 1486, 1968, 2000
BauI	CACGAG	2 cut(s)	210, 393
BbrPI	CACGTG	1 cut(s)	598
BbsI	GAAGAC	3 cut(s)	109, 286, 937
Bbv12I	GWGCWC	4 cut(s)	73, 205, 1211, 2074
BbvI	GCAGC	2 cut(s)	929, 1958
BceAI	ACGGC	2 cut(s)	429, 457
BciT130I	CCWGG	1 cut(s)	1756
BciVI	GTATCC	1 cut(s)	1041
BclI	TGATCA	2 cut(s)	551, 1352
BcnI	CCSGG	4 cut(s)	35, 97, 1151, 2042
BcoDI	GTCTC	3 cut(s)	269, 582, 1801
BfaI	CTAG	5 cut(s)	1297, 1521, 1629, 1800, 2081
BfuAI	ACCTGC	1 cut(s)	188
BfuI	GTATCC	1 cut(s)	1041
BglII	AGATCT	1 cut(s)	1545
BisI	GCNGC	6 cut(s)	451, 567, 918, 1786, 1889, 1972
BlsI	GCNGC	6 cut(s)	452, 568, 919, 1787, 1890, 1973
BmcAI	AGTACT	1 cut(s)	1983
Bme1390I	CCNGG	5 cut(s)	35, 97, 1151, 1756, 2042
Bme18I	GGWCC	3 cut(s)	110, 1572, 1668
BmgBI	CACGTC	1 cut(s)	896
BmgT120I	GGNCC	4 cut(s)	110, 1572, 1668, 2044
BmiI	GGNNCC	6 cut(s)	51, 1045, 1669, 1784, 1918, 1960
BmrFI	CCNGG	5 cut(s)	35, 97, 1151, 1756, 2042
BmrI	ACTGGG	2 cut(s)	1255, 1521
BmsI	GCATC	7 cut(s)	553, 677, 722, 1142, 1246, 1547, 1706
BmuI	ACTGGG	2 cut(s)	1255, 1521
BpiI	GAAGAC	3 cut(s)	109, 286, 937
Bpu14I	TTCGAA	1 cut(s)	178
BpuEI	CTTGAG	2 cut(s)	552, 802
BpuMI	CCSGG	4 cut(s)	35, 97, 1151, 2042
BsaAI	YACGTR	1 cut(s)	598
BsaBI	GATNNNNATC	1 cut(s)	1732
BsaHI	GRCGYC	1 cut(s)	277
BsaI	GGTCTC	1 cut(s)	269
BsaJI	CCNNGG	6 cut(s)	439, 445, 454, 879, 1070, 1280
BsaWI	WCCGGW	1 cut(s)	1456
Bsc4I	CCNNNNNNNGG	5 cut(s)	797, 1040, 1076, 1511, 1569
Bse1I	ACTGG	5 cut(s)	990, 1169, 1261, 1516, 1784
Bse3DI	GCAATG	2 cut(s)	175, 421
Bse8I	GATNNNNATC	1 cut(s)	1732
BseAI	TCCGGA	1 cut(s)	1456
BseBI	CCWGG	1 cut(s)	1756
BseDI	CCNNGG	6 cut(s)	439, 445, 454, 879, 1070, 1280
BseGI	GGATG	7 cut(s)	335, 406, 587, 730, 737, 1226, 1883
BseJI	GATNNNNATC	1 cut(s)	1732
BseLI	CCNNNNNNNGG	5 cut(s)	797, 1040, 1076, 1511, 1569
BseMI	GCAATG	2 cut(s)	175, 421
BseMII	CTCAG	4 cut(s)	879, 1672, 1774, 1807
BseNI	ACTGG	5 cut(s)	990, 1169, 1261, 1516, 1784
BsePI	GCGCGC	1 cut(s)	231
BseRI	GAGGAG	6 cut(s)	390, 393, 554, 1219, 1341, 1344
BseSI	GKGCMC	1 cut(s)	205
BseX3I	CGGCCG	1 cut(s)	442
BseXI	GCAGC	2 cut(s)	929, 1958
BsgI	GTGCAG	3 cut(s)	936, 1661, 1903
Bsh1236I	CGCG	3 cut(s)	231, 233, 235
Bsh1285I	CGRYCG	1 cut(s)	445
BshFI	GGCC	6 cut(s)	444, 450, 739, 884, 2005, 2045
BshNI	GGYRCC	1 cut(s)	1782
BsiEI	CGRYCG	1 cut(s)	445
BsiHKAI	GWGCWC	4 cut(s)	73, 205, 1211, 2074
BsiSI	CCGG	5 cut(s)	35, 97, 1150, 1457, 2042
BslI	CCNNNNNNNGG	5 cut(s)	797, 1040, 1076, 1511, 1569
BsmAI	GTCTC	3 cut(s)	269, 582, 1801
BsnI	GGCC	6 cut(s)	444, 450, 739, 884, 2005, 2045
Bso31I	GGTCTC	1 cut(s)	269
Bsp119I	TTCGAA	1 cut(s)	178
Bsp1286I	GDGCHC	5 cut(s)	54, 73, 205, 1211, 2074
Bsp13I	TCCGGA	1 cut(s)	1456
Bsp1407I	TGTACA	2 cut(s)	511, 1305
Bsp143I	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
Bsp19I	CCATGG	1 cut(s)	879
BspACI	CCGC	9 cut(s)	66, 116, 235, 451, 566, 630, 704, 1786, 1888
BspANI	GGCC	6 cut(s)	444, 450, 739, 884, 2005, 2045
BspCNI	CTCAG	4 cut(s)	878, 1673, 1773, 1808
BspEI	TCCGGA	1 cut(s)	1456
BspFNI	CGCG	3 cut(s)	231, 233, 235
BspHI	TCATGA	1 cut(s)	662
BspLI	GGNNCC	6 cut(s)	51, 1045, 1669, 1784, 1918, 1960
BspMI	ACCTGC	1 cut(s)	188
BspPI	GGATC	3 cut(s)	430, 863, 1602
BspQI	GCTCTTC	1 cut(s)	126
BspT104I	TTCGAA	1 cut(s)	178
BspT107I	GGYRCC	1 cut(s)	1782
BspTNI	GGTCTC	1 cut(s)	269
BsrDI	GCAATG	2 cut(s)	175, 421
BsrGI	TGTACA	2 cut(s)	511, 1305
BsrI	ACTGG	5 cut(s)	990, 1169, 1261, 1516, 1784
BssECI	CCNNGG	6 cut(s)	439, 445, 454, 879, 1070, 1280
BssHII	GCGCGC	1 cut(s)	231
BssMI	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
BssNI	GRCGYC	1 cut(s)	277
BssSI	CACGAG	2 cut(s)	210, 393
BssT1I	CCWWGG	3 cut(s)	454, 879, 1070
Bst2BI	CACGAG	2 cut(s)	210, 393
Bst2UI	CCWGG	1 cut(s)	1756
Bst4CI	ACNGT	3 cut(s)	516, 1117, 1315
Bst6I	CTCTTC	3 cut(s)	126, 631, 1475
BstACI	GRCGYC	1 cut(s)	277
BstAPI	GCANNNNNTGC	1 cut(s)	1782
BstAUI	TGTACA	2 cut(s)	511, 1305
BstBAI	YACGTR	1 cut(s)	598
BstBI	TTCGAA	1 cut(s)	178
BstC8I	GCNNGC	5 cut(s)	233, 737, 1240, 1886, 2003
BstDEI	CTNAG	5 cut(s)	865, 905, 1681, 1760, 1816
BstDSI	CCRYGG	4 cut(s)	439, 445, 879, 1280
BstENI	CCTNNNNNAGG	2 cut(s)	1038, 1567
BstF5I	GGATG	7 cut(s)	335, 406, 587, 730, 737, 1226, 1883
BstFNI	CGCG	3 cut(s)	231, 233, 235
BstHHI	GCGC	3 cut(s)	233, 235, 1562
BstKTI	GATC	8 cut(s)	151, 438, 554, 871, 1355, 1548, 1610, 1736
BstMAI	GTCTC	3 cut(s)	269, 582, 1801
BstMBI	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
BstMCI	CGRYCG	1 cut(s)	445
BstMWI	GCNNNNNNNGC	3 cut(s)	450, 1387, 1782
BstNI	CCWGG	1 cut(s)	1756
BstNSI	RCATGY	1 cut(s)	1149
BstSCI	CCNGG	5 cut(s)	33, 95, 1149, 1754, 2040
BstSLI	GKGCMC	1 cut(s)	205
BstUI	CGCG	3 cut(s)	231, 233, 235
BstV1I	GCAGC	2 cut(s)	929, 1958
BstV2I	GAAGAC	3 cut(s)	109, 286, 937
BstX2I	RGATCY	3 cut(s)	868, 1545, 1607
BstXI	CCANNNNNNTGG	1 cut(s)	446
BstYI	RGATCY	3 cut(s)	868, 1545, 1607
BstZI	CGGCCG	1 cut(s)	442
BsuI	GTATCC	1 cut(s)	1041
BsuRI	GGCC	6 cut(s)	444, 450, 739, 884, 2005, 2045
BtgI	CCRYGG	4 cut(s)	439, 445, 879, 1280
BtgZI	GCGATG	1 cut(s)	499
BtrI	CACGTC	1 cut(s)	896
BtsCI	GGATG	7 cut(s)	335, 406, 587, 730, 737, 1226, 1883
BtsIMutI	CAGTG	4 cut(s)	521, 1588, 1678, 1891
BveI	ACCTGC	1 cut(s)	188
Cac8I	GCNNGC	5 cut(s)	233, 737, 1240, 1886, 2003
CaiI	CAGNNNCTG	1 cut(s)	1773
CciI	TCATGA	1 cut(s)	662
CfoI	GCGC	3 cut(s)	233, 235, 1562
Cfr13I	GGNCC	4 cut(s)	110, 1572, 1668, 2044
CseI	GACGC	1 cut(s)	1759
Csp6I	GTAC	6 cut(s)	512, 612, 1306, 1465, 1976, 1982
CviQI	GTAC	6 cut(s)	512, 612, 1306, 1465, 1976, 1982
DdeI	CTNAG	5 cut(s)	865, 905, 1681, 1760, 1816
DpnI	GATC	8 cut(s)	150, 437, 553, 870, 1354, 1547, 1609, 1735
DpnII	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
DraI	TTTAAA	1 cut(s)	1394
EaeI	YGGCCR	3 cut(s)	442, 448, 737
EagI	CGGCCG	1 cut(s)	442
Eam1104I	CTCTTC	3 cut(s)	126, 631, 1475
EarI	CTCTTC	3 cut(s)	126, 631, 1475
Ecl136II	GAGCTC	2 cut(s)	71, 2072
EclXI	CGGCCG	1 cut(s)	442
Eco130I	CCWWGG	3 cut(s)	454, 879, 1070
Eco24I	GRGCYC	3 cut(s)	54, 73, 2074
Eco31I	GGTCTC	1 cut(s)	269
Eco32I	GATATC	1 cut(s)	17
Eco47I	GGWCC	3 cut(s)	110, 1572, 1668
Eco52I	CGGCCG	1 cut(s)	442
Eco53kI	GAGCTC	2 cut(s)	71, 2072
Eco57I	CTGAAG	3 cut(s)	871, 1396, 2028
Eco72I	CACGTG	1 cut(s)	598
EcoICRI	GAGCTC	2 cut(s)	71, 2072
EcoNI	CCTNNNNNAGG	2 cut(s)	1038, 1567
EcoO109I	RGGNCCY	1 cut(s)	1668
EcoRII	CCWGG	1 cut(s)	1754
EcoRV	GATATC	1 cut(s)	17
EcoT14I	CCWWGG	3 cut(s)	454, 879, 1070
EcoT38I	GRGCYC	3 cut(s)	54, 73, 2074
ErhI	CCWWGG	3 cut(s)	454, 879, 1070
FalI	AAGNNNNNCTT	2 cut(s)	1971, 2003
FauI	CCCGC	2 cut(s)	623, 697
FauNDI	CATATG	1 cut(s)	2014
FbaI	TGATCA	2 cut(s)	551, 1352
Fnu4HI	GCNGC	6 cut(s)	451, 567, 918, 1786, 1889, 1972
FokI	GGATG	7 cut(s)	342, 413, 594, 737, 744, 1233, 1890
FriOI	GRGCYC	3 cut(s)	54, 73, 2074
Fsp4HI	GCNGC	6 cut(s)	451, 567, 918, 1786, 1889, 1972
FspBI	CTAG	5 cut(s)	1297, 1521, 1629, 1800, 2081
GlaI	GCGC	3 cut(s)	232, 234, 1561
GluI	GCNGC	6 cut(s)	451, 567, 918, 1786, 1889, 1972
HaeIII	GGCC	6 cut(s)	444, 450, 739, 884, 2005, 2045
HapII	CCGG	5 cut(s)	35, 97, 1150, 1457, 2042
HgaI	GACGC	1 cut(s)	1759
HhaI	GCGC	3 cut(s)	233, 235, 1562
Hin1I	GRCGYC	1 cut(s)	277
Hin6I	GCGC	3 cut(s)	231, 233, 1560
HinP1I	GCGC	3 cut(s)	231, 233, 1560
HincII	GTYRAC	2 cut(s)	1199, 1823
HindII	GTYRAC	2 cut(s)	1199, 1823
HinfI	GANTC	8 cut(s)	38, 248, 253, 318, 534, 960, 1080, 1293
HpaII	CCGG	5 cut(s)	35, 97, 1150, 1457, 2042
HphI	GGTGA	6 cut(s)	347, 474, 955, 969, 1362, 1371
Hpy166II	GTNNAC	5 cut(s)	203, 338, 465, 1199, 1823
Hpy8I	GTNNAC	5 cut(s)	203, 338, 465, 1199, 1823
Hpy99I	CGWCG	2 cut(s)	195, 279
HpyCH4III	ACNGT	3 cut(s)	516, 1117, 1315
HpyCH4IV	ACGT	4 cut(s)	277, 597, 895, 1833
HpyF10VI	GCNNNNNNNGC	3 cut(s)	450, 1387, 1782
HpyF3I	CTNAG	5 cut(s)	865, 905, 1681, 1760, 1816
HpySE526I	ACGT	4 cut(s)	277, 597, 895, 1833
Hsp92I	GRCGYC	1 cut(s)	277
HspAI	GCGC	3 cut(s)	231, 233, 1560
Kpn2I	TCCGGA	1 cut(s)	1456
Ksp22I	TGATCA	2 cut(s)	551, 1352
Kzo9I	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
LguI	GCTCTTC	1 cut(s)	126
LmnI	GCTCC	8 cut(s)	49, 68, 746, 1043, 1206, 1922, 1958, 1991
Lsp1109I	GCAGC	2 cut(s)	929, 1958
LweI	GCATC	7 cut(s)	553, 677, 722, 1142, 1246, 1547, 1706
MaeI	CTAG	5 cut(s)	1297, 1521, 1629, 1800, 2081
MaeII	ACGT	4 cut(s)	277, 597, 895, 1833
MaeIII	GTNAC	3 cut(s)	850, 961, 1763
MalI	GATC	8 cut(s)	150, 437, 553, 870, 1354, 1547, 1609, 1735
MauBI	CGCGCGCG	1 cut(s)	231
MboI	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
MflI	RGATCY	3 cut(s)	868, 1545, 1607
MhlI	GDGCHC	5 cut(s)	54, 73, 205, 1211, 2074
MlsI	TGGCCA	1 cut(s)	739
MluCI	AATT	8 cut(s)	76, 489, 985, 1008, 1049, 1190, 1344, 1424
MluNI	TGGCCA	1 cut(s)	739
MlyI	GAGTC	4 cut(s)	262, 327, 543, 969
MmeI	TCCRAC	2 cut(s)	292, 1726
Mox20I	TGGCCA	1 cut(s)	739
MroI	TCCGGA	1 cut(s)	1456
MscI	TGGCCA	1 cut(s)	739
MseI	TTAA	6 cut(s)	931, 984, 1011, 1183, 1393, 1540
MslI	CAYNNNNRTG	2 cut(s)	444, 596
Msp20I	TGGCCA	1 cut(s)	739
MspI	CCGG	5 cut(s)	35, 97, 1150, 1457, 2042
MspR9I	CCNGG	5 cut(s)	35, 97, 1151, 1756, 2042
MvaI	CCWGG	1 cut(s)	1756
MvnI	CGCG	3 cut(s)	231, 233, 235
MwoI	GCNNNNNNNGC	3 cut(s)	450, 1387, 1782
NciI	CCSGG	4 cut(s)	35, 97, 1151, 2042
NcoI	CCATGG	1 cut(s)	879
NdeI	CATATG	1 cut(s)	2014
NdeII	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
NlaIV	GGNNCC	6 cut(s)	51, 1045, 1669, 1784, 1918, 1960
NmuCI	GTSAC	2 cut(s)	850, 961
NspI	RCATGY	1 cut(s)	1149
NspV	TTCGAA	1 cut(s)	178
OliI	CACNNNNGTG	2 cut(s)	444, 596
PagI	TCATGA	1 cut(s)	662
PaqCI	CACCTGC	1 cut(s)	188
PauI	GCGCGC	1 cut(s)	231
PciSI	GCTCTTC	1 cut(s)	126
PfeI	GAWTC	4 cut(s)	38, 248, 1080, 1293
PfoI	TCCNGGA	1 cut(s)	33
PkrI	GCNGC	6 cut(s)	452, 568, 919, 1787, 1890, 1973
PleI	GAGTC	4 cut(s)	261, 326, 542, 968
PmaCI	CACGTG	1 cut(s)	598
PmlI	CACGTG	1 cut(s)	598
PpsI	GAGTC	4 cut(s)	261, 326, 542, 968
Ppu21I	YACGTR	1 cut(s)	598
PpuMI	RGGWCCY	1 cut(s)	1668
PshBI	ATTAAT	1 cut(s)	1011
Psp124BI	GAGCTC	2 cut(s)	73, 2074
Psp5II	RGGWCCY	1 cut(s)	1668
Psp6I	CCWGG	1 cut(s)	1754
PspCI	CACGTG	1 cut(s)	598
PspGI	CCWGG	1 cut(s)	1754
PspN4I	GGNNCC	6 cut(s)	51, 1045, 1669, 1784, 1918, 1960
PspPI	GGNCC	4 cut(s)	110, 1572, 1668, 2044
PspPPI	RGGWCCY	1 cut(s)	1668
PstNI	CAGNNNCTG	1 cut(s)	1773
PsuI	RGATCY	3 cut(s)	868, 1545, 1607
PteI	GCGCGC	1 cut(s)	231
RsaI	GTAC	6 cut(s)	513, 613, 1307, 1466, 1977, 1983
RsaNI	GTAC	6 cut(s)	512, 612, 1306, 1465, 1976, 1982
RseI	CAYNNNNRTG	2 cut(s)	444, 596
SacI	GAGCTC	2 cut(s)	73, 2074
SapI	GCTCTTC	1 cut(s)	126
SaqAI	TTAA	6 cut(s)	931, 984, 1011, 1183, 1393, 1540
SatI	GCNGC	6 cut(s)	451, 567, 918, 1786, 1889, 1972
Sau3AI	GATC	8 cut(s)	148, 435, 551, 868, 1352, 1545, 1607, 1733
Sau96I	GGNCC	4 cut(s)	110, 1572, 1668, 2044
ScaI	AGTACT	1 cut(s)	1983
SchI	GAGTC	4 cut(s)	262, 327, 543, 969
ScrFI	CCNGG	5 cut(s)	35, 97, 1151, 1756, 2042
SduI	GDGCHC	5 cut(s)	54, 73, 205, 1211, 2074
SfaNI	GCATC	7 cut(s)	553, 677, 722, 1142, 1246, 1547, 1706
SfuI	TTCGAA	1 cut(s)	178
SinI	GGWCC	3 cut(s)	110, 1572, 1668
SmiMI	CAYNNNNRTG	2 cut(s)	444, 596
SmlI	CTYRAG	2 cut(s)	531, 817
SmoI	CTYRAG	2 cut(s)	531, 817
Sse9I	AATT	8 cut(s)	76, 489, 985, 1008, 1049, 1190, 1344, 1424
SsiI	CCGC	9 cut(s)	66, 116, 235, 451, 566, 630, 704, 1786, 1888
SspI	AATATT	1 cut(s)	935
SspMI	CTAG	5 cut(s)	1297, 1521, 1629, 1800, 2081
SstI	GAGCTC	2 cut(s)	73, 2074
StyD4I	CCNGG	5 cut(s)	33, 95, 1149, 1754, 2040
StyI	CCWWGG	3 cut(s)	454, 879, 1070
TaaI	ACNGT	3 cut(s)	516, 1117, 1315
TaiI	ACGT	4 cut(s)	280, 600, 898, 1836
TaqI	TCGA	9 cut(s)	27, 178, 251, 537, 1015, 1384, 1473, 1646, 2074
TasI	AATT	8 cut(s)	76, 489, 985, 1008, 1049, 1190, 1344, 1424
TatI	WGTACW	3 cut(s)	511, 1305, 1981
TauI	GCSGC	4 cut(s)	453, 569, 1788, 1891
TfiI	GAWTC	4 cut(s)	38, 248, 1080, 1293
Tru1I	TTAA	6 cut(s)	931, 984, 1011, 1183, 1393, 1540
Tru9I	TTAA	6 cut(s)	931, 984, 1011, 1183, 1393, 1540
TscAI	CASTG	4 cut(s)	521, 1595, 1685, 1898
TseFI	GTSAC	2 cut(s)	850, 961
TseI	GCWGC	2 cut(s)	917, 1971
Tsp45I	GTSAC	2 cut(s)	850, 961
TspDTI	ATGAA	7 cut(s)	144, 417, 502, 679, 697, 1306, 2064
TspGWI	ACGGA	1 cut(s)	1269
TspRI	CASTG	4 cut(s)	521, 1595, 1685, 1898
VneI	GTGCAC	1 cut(s)	201
VpaK11BI	GGWCC	3 cut(s)	110, 1572, 1668
VspI	ATTAAT	1 cut(s)	1011
XagI	CCTNNNNNAGG	2 cut(s)	1038, 1567
XapI	RAATTY	2 cut(s)	489, 1344
XbaI	TCTAGA	2 cut(s)	1296, 1520
XceI	RCATGY	1 cut(s)	1149
XspI	CTAG	5 cut(s)	1297, 1521, 1629, 1800, 2081
ZraI	GACGTC	1 cut(s)	278
ZrmI	AGTACT	1 cut(s)	1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.