Rroxscaffold_2G00101600

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
23523183 .. 23528487
5305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00101600.1

Sequence Viewer

Length: 1611 bp
ATGGTGGAGGATTATCATGAAGTGGTTTTGAGAGATGAAGATGCTTGGAATGTGGGGCGGGGAAGTGTGGTTGAGGGGATGAGGGATGCTGGCCATCAGGAGCAGAGTAGGAGGGTAGAAGGGTTGATGTTTGAAGATGACTGCCTTGTGGTGGTATCGGAGTTTGAAACTCAAGATGTGAAAAGTGAGGTGCAAAAATCTTGGTCACGGGAAACCCCTCAGATCCCTATTCCATGGCCTTCAGATGACGTGATAAACTTAGAGTGGGTGCAGGACATGATGTTTAATATTGAGCAGTCTTCATATGGTGGTGAGTCACCAATGAGATTTTGTGATTTAATTCCAGTTCCTTTGGTGGATAAATTAATCGACACAGCCACAAGTATCCTTTGCAAGGAGCCAAATTGTGTGCAAGTTGATTGCCAAGGAAAGGATTCAAGAGTTGTTGTAGTTGGCGACATTTATGGACAGTTCCATGATTTACTGCATCTCTTTGAACATGCTGGGTTGCCCTCTGACAACCAGTTGTATGTTTTTAATGGAAATTATGTTGACAGAGGAGCACGGGGCTTGGATGTCTTTCTCATCTTGCTGGCTTGGAAGGTCTTGATGCCCAGTAGAGTATATCTACTCCGTGGAAACCATGAATCTAGATATTGTACATTTCTGTATGGTTTTGAGGAGGAGGTCAAGACTAAATTCGGTGATCATGGTGAATATGTCTATAATAAATGCCTCGACTGCTTTAAAGAGCTTCCTCTGGCTTCAGTCATAGCCAATTCTGTATATACCACACATGGTGGTCTTTTCCGGAGTATTACCTCTTCGAGAAAGTTGAAAAGAAAGAGGGAGGAAAGCCTTGAACTGGGTTCTCTAGAAGATTTATCTAAGGTTAAAAGATCTCTTATAGATGCACCTGATGTAGGTCCGAATGTATTACTCACTGATGTACTATGGTCAGATCCATCAAAGGAAGATGGTCTAGTTGAAAAGACATTTCGAGAACGAGGTCTTTGGTGGGGTCCTGACTGCACTGAGGCTTTTCTAAAACAATCCAACTTGAAGTTGATCATACGATCACATGAAGGTCCAGATGTAAGGGAAGGTCAAGATGACTTTGGTGACATGCTAAGTGGTTATAGTGTGGATCATGTAGGAGATTCAGGAAAGCTATACACTTTGTTTAGTGCTCCAGATTACCCACAGTGTGGTGAAAAGAGATATAACAACAAAGGAGTCTATGCTGTATTGAAACCTCCTAATTTTGAAAGTCCTTCATTCCACTCATTCAAGGATGTAGGAAGGCCACAGGCCGATGCTGATGGCGATAACGATCTGGTCATTGTGGATAAACCAGGCTCAGTAACAGCGTCTGCAACTGGTGCCGCTTCTTTGTCTCTAGCTTCTGTTAGTTCTGAGGTTGACTTCAAGACGTTAGGCATTTCTAACCCCCCTTCTTCAAGTGTTATGATGGGGGATGGTGCAGGCGGCACTGAACTTGTCCAAGTTCCGAAGGCTCCTGTGGTAGAAGGATTGCCTCTGCCTTCGGAGTTACAGGTGGTGGATGTTTCAGGTTGCGATTCTTCCTTTATTAGCAGAGGTCTAAATTAA

Protein Analysis

536

Amino Acids

59.41

Weight (kDa)

4.72

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 147 - 362 9.5e-29 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1382
AccB7I CCANNNNNTGG 1 cut(s) 1208
AccIII TCCGGA 1 cut(s) 810
AciI CCGC 3 cut(s) 58, 1386, 1488
AclWI GGATC 3 cut(s) 217, 956, 1155
AcoI YGGCCR 1 cut(s) 91
AcsI RAATTY 1 cut(s) 698
AcuI CTGAAG 2 cut(s) 225, 750
AdeI CACNNNGTG 2 cut(s) 800, 1208
AfaI GTAC 2 cut(s) 661, 951
AfiI CCNNNNNNNGG 6 cut(s) 151, 394, 430, 865, 923, 1208
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 1 cut(s) 1354
AluBI AGCT 3 cut(s) 754, 1171, 1403
AluI AGCT 3 cut(s) 754, 1171, 1403
Alw21I GWGCWC 2 cut(s) 565, 1192
Alw26I GTCTC 1 cut(s) 1401
AlwI GGATC 3 cut(s) 217, 956, 1155
AlwNI CAGNNNCTG 1 cut(s) 1373
Aor13HI TCCGGA 1 cut(s) 810
AoxI GGCC 4 cut(s) 91, 236, 1304, 1311
ApoI RAATTY 1 cut(s) 698
AseI ATTAAT 1 cut(s) 365
Asp700I GAANNNNTTC 1 cut(s) 433
AspS9I GGNCC 3 cut(s) 926, 1022, 1088
AsuHPI GGTGA 6 cut(s) 309, 323, 716, 725, 1133, 1223
AvaII GGWCC 3 cut(s) 926, 1022, 1088
BalI TGGCCA 1 cut(s) 93
BanI GGYRCC 1 cut(s) 1382
BarI GAAGNNNNNNTAC 2 cut(s) 808, 840
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 2 cut(s) 565, 1192
BccI CCATC 6 cut(s) 102, 971, 973, 1316, 1465, 1472
BciT130I CCWGG 1 cut(s) 1356
BciVI GTATCC 1 cut(s) 395
BclI TGATCA 2 cut(s) 706, 1068
BcoDI GTCTC 1 cut(s) 1401
BfaI CTAG 4 cut(s) 651, 875, 983, 1400
BfuI GTATCC 1 cut(s) 395
BglII AGATCT 1 cut(s) 899
BisI GCNGC 2 cut(s) 1386, 1489
BlsI GCNGC 2 cut(s) 1387, 1490
Bme1390I CCNGG 1 cut(s) 1356
Bme18I GGWCC 3 cut(s) 926, 1022, 1088
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 3 cut(s) 926, 1022, 1088
BmiI GGNNCC 4 cut(s) 399, 1023, 1384, 1518
BmrFI CCNGG 1 cut(s) 1356
BmrI ACTGGG 2 cut(s) 609, 875
BmsI GCATC 6 cut(s) 31, 76, 496, 600, 901, 1306
BmuI ACTGGG 2 cut(s) 609, 875
BpiI GAAGAC 1 cut(s) 291
BpmI CTGGAG 1 cut(s) 1176
BpuEI CTTGAG 1 cut(s) 156
BsaBI GATNNNNATC 1 cut(s) 1332
BsaJI CCNNGG 3 cut(s) 233, 424, 634
BsaWI WCCGGW 1 cut(s) 810
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 394, 430, 865, 923, 1208
Bse1I ACTGG 5 cut(s) 344, 523, 615, 870, 1384
Bse8I GATNNNNATC 1 cut(s) 1332
BseAI TCCGGA 1 cut(s) 810
BseBI CCWGG 1 cut(s) 1356
BseDI CCNNGG 3 cut(s) 233, 424, 634
BseGI GGATG 6 cut(s) 84, 91, 580, 1300, 1483, 1570
BseJI GATNNNNATC 1 cut(s) 1332
BseLI CCNNNNNNNGG 6 cut(s) 151, 394, 430, 865, 923, 1208
BseMII CTCAG 4 cut(s) 233, 1026, 1374, 1407
BseNI ACTGG 5 cut(s) 344, 523, 615, 870, 1384
BseRI GAGGAG 3 cut(s) 573, 695, 698
BseYI CCCAGC 1 cut(s) 503
BsgI GTGCAG 3 cut(s) 290, 1015, 1503
BshFI GGCC 4 cut(s) 93, 238, 1306, 1313
BshNI GGYRCC 1 cut(s) 1382
BsiHKAI GWGCWC 2 cut(s) 565, 1192
BsiSI CCGG 1 cut(s) 811
BslI CCNNNNNNNGG 6 cut(s) 151, 394, 430, 865, 923, 1208
BsmAI GTCTC 1 cut(s) 1401
BsnI GGCC 4 cut(s) 93, 238, 1306, 1313
Bsp1286I GDGCHC 2 cut(s) 565, 1192
Bsp13I TCCGGA 1 cut(s) 810
Bsp1407I TGTACA 1 cut(s) 659
Bsp143I GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
Bsp19I CCATGG 1 cut(s) 233
BspACI CCGC 3 cut(s) 58, 1386, 1488
BspANI GGCC 4 cut(s) 93, 238, 1306, 1313
BspCNI CTCAG 4 cut(s) 232, 1027, 1373, 1408
BspEI TCCGGA 1 cut(s) 810
BspHI TCATGA 1 cut(s) 16
BspLI GGNNCC 4 cut(s) 399, 1023, 1384, 1518
BspPI GGATC 3 cut(s) 217, 956, 1155
BspT107I GGYRCC 1 cut(s) 1382
BsrGI TGTACA 1 cut(s) 659
BsrI ACTGG 5 cut(s) 344, 523, 615, 870, 1384
BssECI CCNNGG 3 cut(s) 233, 424, 634
BssMI GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
BssT1I CCWWGG 2 cut(s) 233, 424
Bst2UI CCWGG 1 cut(s) 1356
Bst4CI ACNGT 2 cut(s) 471, 1206
Bst6I CTCTTC 1 cut(s) 829
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstAUI TGTACA 1 cut(s) 659
BstC8I GCNNGC 3 cut(s) 91, 594, 1486
BstDEI CTNAG 7 cut(s) 219, 259, 888, 1035, 1130, 1360, 1416
BstDSI CCRYGG 2 cut(s) 233, 634
BstENI CCTNNNNNAGG 2 cut(s) 392, 921
BstF5I GGATG 6 cut(s) 84, 91, 580, 1300, 1483, 1570
BstKTI GATC 8 cut(s) 225, 709, 902, 964, 1071, 1079, 1150, 1336
BstMAI GTCTC 1 cut(s) 1401
BstMBI GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
BstMWI GCNNNNNNNGC 2 cut(s) 741, 1382
BstNI CCWGG 1 cut(s) 1356
BstNSI RCATGY 2 cut(s) 503, 1129
BstSCI CCNGG 1 cut(s) 1354
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 3 cut(s) 222, 899, 961
BstYI RGATCY 3 cut(s) 222, 899, 961
BsuI GTATCC 1 cut(s) 395
BsuRI GGCC 4 cut(s) 93, 238, 1306, 1313
BtgI CCRYGG 2 cut(s) 233, 634
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 6 cut(s) 84, 91, 580, 1300, 1483, 1570
BtsIMutI CAGTG 4 cut(s) 942, 1032, 1211, 1491
Cac8I GCNNGC 3 cut(s) 91, 594, 1486
CaiI CAGNNNCTG 1 cut(s) 1373
CciI TCATGA 1 cut(s) 16
Cfr13I GGNCC 3 cut(s) 926, 1022, 1088
CseI GACGC 1 cut(s) 1359
Csp6I GTAC 2 cut(s) 660, 950
CviQI GTAC 2 cut(s) 660, 950
DdeI CTNAG 7 cut(s) 219, 259, 888, 1035, 1130, 1360, 1416
DpnI GATC 8 cut(s) 224, 708, 901, 963, 1070, 1078, 1149, 1335
DpnII GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
DraI TTTAAA 1 cut(s) 748
DraIII CACNNNGTG 2 cut(s) 800, 1208
EaeI YGGCCR 1 cut(s) 91
Eam1104I CTCTTC 1 cut(s) 829
EarI CTCTTC 1 cut(s) 829
Eco130I CCWWGG 2 cut(s) 233, 424
Eco47I GGWCC 3 cut(s) 926, 1022, 1088
Eco57I CTGAAG 2 cut(s) 225, 750
EcoNI CCTNNNNNAGG 2 cut(s) 392, 921
EcoO109I RGGNCCY 1 cut(s) 1022
EcoRII CCWGG 1 cut(s) 1354
EcoT14I CCWWGG 2 cut(s) 233, 424
ErhI CCWWGG 2 cut(s) 233, 424
FauI CCCGC 1 cut(s) 51
FauNDI CATATG 1 cut(s) 304
FbaI TGATCA 2 cut(s) 706, 1068
Fnu4HI GCNGC 2 cut(s) 1386, 1489
FokI GGATG 6 cut(s) 91, 98, 587, 1307, 1490, 1577
Fsp4HI GCNGC 2 cut(s) 1386, 1489
FspBI CTAG 4 cut(s) 651, 875, 983, 1400
GluI GCNGC 2 cut(s) 1386, 1489
GsaI CCCAGC 1 cut(s) 507
GsuI CTGGAG 1 cut(s) 1176
HaeIII GGCC 4 cut(s) 93, 238, 1306, 1313
HapII CCGG 1 cut(s) 811
HgaI GACGC 1 cut(s) 1359
HincII GTYRAC 2 cut(s) 553, 1423
HindII GTYRAC 2 cut(s) 553, 1423
HinfI GANTC 6 cut(s) 314, 434, 647, 1160, 1236, 1580
HpaII CCGG 1 cut(s) 811
HphI GGTGA 6 cut(s) 309, 323, 716, 725, 1133, 1223
Hpy166II GTNNAC 2 cut(s) 553, 1423
Hpy188I TCNGA 9 cut(s) 160, 222, 244, 517, 930, 961, 1417, 1512, 1549
Hpy8I GTNNAC 2 cut(s) 553, 1423
HpyCH4III ACNGT 2 cut(s) 471, 1206
HpyCH4IV ACGT 2 cut(s) 249, 1433
HpyCH4V TGCA 9 cut(s) 193, 271, 393, 412, 487, 914, 1032, 1376, 1484
HpyF10VI GCNNNNNNNGC 2 cut(s) 741, 1382
HpyF3I CTNAG 7 cut(s) 219, 259, 888, 1035, 1130, 1360, 1416
HpySE526I ACGT 2 cut(s) 249, 1433
Kpn2I TCCGGA 1 cut(s) 810
Ksp22I TGATCA 2 cut(s) 706, 1068
Kzo9I GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
LmnI GCTCC 5 cut(s) 100, 397, 560, 1195, 1522
LweI GCATC 6 cut(s) 31, 76, 496, 600, 901, 1306
MaeI CTAG 4 cut(s) 651, 875, 983, 1400
MaeII ACGT 2 cut(s) 249, 1433
MaeIII GTNAC 5 cut(s) 204, 315, 1121, 1363, 1551
MalI GATC 8 cut(s) 224, 708, 901, 963, 1070, 1078, 1149, 1335
MboI GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
MboII GAAGA 8 cut(s) 50, 146, 291, 816, 890, 986, 1449, 1575
MflI RGATCY 3 cut(s) 222, 899, 961
MhlI GDGCHC 2 cut(s) 565, 1192
MlsI TGGCCA 1 cut(s) 93
MluCI AATT 8 cut(s) 339, 362, 403, 544, 698, 778, 1261, 1606
MluNI TGGCCA 1 cut(s) 93
MlyI GAGTC 2 cut(s) 323, 1245
MmeI TCCRAC 1 cut(s) 1080
Mox20I TGGCCA 1 cut(s) 93
MroI TCCGGA 1 cut(s) 810
MroXI GAANNNNTTC 1 cut(s) 433
MscI TGGCCA 1 cut(s) 93
MseI TTAA 7 cut(s) 285, 338, 365, 537, 747, 894, 1609
Msp20I TGGCCA 1 cut(s) 93
MspI CCGG 1 cut(s) 811
MspR9I CCNGG 1 cut(s) 1356
MvaI CCWGG 1 cut(s) 1356
MwoI GCNNNNNNNGC 2 cut(s) 741, 1382
NcoI CCATGG 1 cut(s) 233
NdeI CATATG 1 cut(s) 304
NdeII GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
NlaIV GGNNCC 4 cut(s) 399, 1023, 1384, 1518
NmuCI GTSAC 3 cut(s) 204, 315, 1121
NspI RCATGY 2 cut(s) 503, 1129
PagI TCATGA 1 cut(s) 16
PdmI GAANNNNTTC 1 cut(s) 433
PfeI GAWTC 4 cut(s) 434, 647, 1160, 1580
PflMI CCANNNNNTGG 1 cut(s) 1208
PkrI GCNGC 2 cut(s) 1387, 1490
PleI GAGTC 2 cut(s) 322, 1244
PpsI GAGTC 2 cut(s) 322, 1244
PpuMI RGGWCCY 1 cut(s) 1022
PshBI ATTAAT 1 cut(s) 365
Psp5II RGGWCCY 1 cut(s) 1022
Psp6I CCWGG 1 cut(s) 1354
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 1 cut(s) 1354
PspN4I GGNNCC 4 cut(s) 399, 1023, 1384, 1518
PspPI GGNCC 3 cut(s) 926, 1022, 1088
PspPPI RGGWCCY 1 cut(s) 1022
PstNI CAGNNNCTG 1 cut(s) 1373
PsuI RGATCY 3 cut(s) 222, 899, 961
RsaI GTAC 2 cut(s) 661, 951
RsaNI GTAC 2 cut(s) 660, 950
SaqAI TTAA 7 cut(s) 285, 338, 365, 537, 747, 894, 1609
SatI GCNGC 2 cut(s) 1386, 1489
Sau3AI GATC 8 cut(s) 222, 706, 899, 961, 1068, 1076, 1147, 1333
Sau96I GGNCC 3 cut(s) 926, 1022, 1088
SchI GAGTC 2 cut(s) 323, 1245
ScrFI CCNGG 1 cut(s) 1356
SduI GDGCHC 2 cut(s) 565, 1192
SfaNI GCATC 6 cut(s) 31, 76, 496, 600, 901, 1306
SinI GGWCC 3 cut(s) 926, 1022, 1088
SmlI CTYRAG 1 cut(s) 171
SmoI CTYRAG 1 cut(s) 171
Sse9I AATT 8 cut(s) 339, 362, 403, 544, 698, 778, 1261, 1606
SsiI CCGC 3 cut(s) 58, 1386, 1488
SspI AATATT 1 cut(s) 289
SspMI CTAG 4 cut(s) 651, 875, 983, 1400
StyD4I CCNGG 1 cut(s) 1354
StyI CCWWGG 2 cut(s) 233, 424
TaaI ACNGT 2 cut(s) 471, 1206
TaiI ACGT 2 cut(s) 252, 1436
TaqI TCGA 4 cut(s) 369, 738, 827, 1000
TasI AATT 8 cut(s) 339, 362, 403, 544, 698, 778, 1261, 1606
TatI WGTACW 2 cut(s) 659, 949
TauI GCSGC 2 cut(s) 1388, 1491
TfiI GAWTC 4 cut(s) 434, 647, 1160, 1580
Tru1I TTAA 7 cut(s) 285, 338, 365, 537, 747, 894, 1609
Tru9I TTAA 7 cut(s) 285, 338, 365, 537, 747, 894, 1609
TscAI CASTG 4 cut(s) 949, 1039, 1211, 1498
TseFI GTSAC 3 cut(s) 204, 315, 1121
Tsp45I GTSAC 3 cut(s) 204, 315, 1121
TspDTI ATGAA 6 cut(s) 33, 51, 291, 660, 1098, 1266
TspGWI ACGGA 1 cut(s) 623
TspRI CASTG 4 cut(s) 949, 1039, 1211, 1498
Van91I CCANNNNNTGG 1 cut(s) 1208
VpaK11BI GGWCC 3 cut(s) 926, 1022, 1088
VspI ATTAAT 1 cut(s) 365
XagI CCTNNNNNAGG 2 cut(s) 392, 921
XapI RAATTY 1 cut(s) 698
XbaI TCTAGA 2 cut(s) 650, 874
XceI RCATGY 2 cut(s) 503, 1129
XmnI GAANNNNTTC 1 cut(s) 433
XspI CTAG 4 cut(s) 651, 875, 983, 1400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.