pycom10g03160

Protein ROOT PRIMORDIUM DEFECTIVE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0014511
Physical Location & Seq
Reverse (-)
3520776 .. 3522740
1965 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1893 bp
ATGTCTCCAATATACGTCGCCGTCCGCCGCTCTCTCCCAAAATCACATCCTCAGTCCTCCCACCACCGCCACACCCTCCACAGAACCTTCTTCATCGACACCACCACCACAAAATGGGTCCGAGACCGAGGCCTCGACCACGCCGTCGAGAGGGAGAAGAACCTCAGGCCATTGATCAACATCAAGAACTTCATTAAATCAGAGCCGTCCAAGTCCCTCCCCATTTCCATCATCGCTCAAAACAGAGAATCTCTCATGATACCCACCCGCTCCATCGAATTCATCCGCAAATACCCTTCGATTTTCGAGGAATTTCTCCCCGGCGGCGTTGCAGTCCACCCCCATGTCCGGCTCACTGCCCAAGTGCTCGATCTCGACACTGAAGAAGAGCTCATGTACCAGAGTGAGAGCTACAAGCAGGACGTCGCTGACCGGCTTTTGAAGCTCCTAATGCTGGTAAGAACCAATAAACTGCCCCTAAATGTGATTGATCGCTTGAAATGGGATCTGGGGCTTCCTCATGATTTTGAGAGAACCTTAGTCCCTGAGTATCCGGACTATTTTAATGTCGTAGCTCGCAAAAGTTCGGCTTCTGGGTCCGAAAGTTTGCGGGATTTGGAGTTGGTGTATTGGAAAAATGAATTCGCAAGTTCGGTTATACAGAAGAAAGCTTTAGCTATGGAGAAGAAGGCTTCTGCTAGGAAGAAGAAGGCAATGAGTGGGGATTCTGCTTCGAAGGAGGAAAATCAAATTGTTTTTCCTATGGAGTTTTCGAGAGGTTTTGAGGTGGATAAGAAGTTCAAGAAGTGGATTGATGAGTGGCAGAAGTTGGCTTATGTGTCTCCATATGAAAATGCAGCTCATCTTTCTTCAAAGAGTGACGAATCAGATAAGTGGGCGGTCGCGGTTCTGCACGAGCTTCTGCATATTTTGGTTCCGAAGAAGACGGACAGGGAGAATATCCTGTGTCTTGGAGAACATTTGGGTCTTCGGTCAAGGTTTAAGCAAGCATTACACAATCACCCGGGTATATTTTATTTGTCAAACAAGATAGGAACTTATACTGTTGTTTTGAGAGAGGGGTATAAGAGGGGTGTGATTGTTGAAGATCATCCATTAACGAATATGAGAAGCCAGTATATTCACCTTATGAATACGGTAAAGGAAGATAGTAAAACGATCAACTTGCCAGGTAAACGAACTCAAGAAAACAAGAAGGTAATTCATGCTAAAGGAAACGATGAAGAGGAAACTGAGGACCAGCAGGAAGGGGAGTTGTGTGATTCATCTGATGATGAAGTTGAGCCTGATGATGTTGACGATGATAGTGATGAAGAAGATGAAGATCAGAGTGAGACAAATGTTGAACAAAATGCTATCAATAACAGAGGACGAAGAGGTAGGAAGTCTAATTTTGATGGGAAAGCACCTTTCAAAAATGCTGAAAGAGGAAGGTTGGACAGCAGAAGAGCTAGGAAATCTGATTATGATATGAAAGAGCCTTCCAGAAATGCTGAAAGAGGAAGGTCAGATGGAAGAAGAGCTAGGAACTCTGATTTTGATGGGACAGCACCTTTCAGAAATTCTGAAAGAGGAAGGTCGGATGGAAGAAAAGCTAGGAAGTCGGATTTTGATGGCACAGCACCTTCCAGAAATGCTGAAAGAGGAAGGTCGGATGGAAGAAGAAGATCTGATTTTGATGTGAAAGAACCTTCCAGAAACTCCGAAAGGGGTAGGGATGGTACACAGCACCCTGGTAAGAGTGGAGATGGGGTCTATTCGGAAACTTCTAGAGGAACACAAACTCATTTGAGGCATGATAATGTAAGAGGAAGATTGAATTTATCTCGAAGCAAGGGGAGGTCATTACCAGAAAAGAACACTAGTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PORR

Protein Analysis

631

Amino Acids

72.29

Weight (kDa)

9.13

Isoelectric Point (pI)

53.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PORR PF11955 40 - 388 2.1e-113 Plant organelle RNA recognition domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014511)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71850
fragaria_vesca FvH4_4g08630 FvH4_4g08630
malus_domestica MD10G1045200.v1.1
prunus_persica Prupe.8G052100_v2.0.a1
pyrus_communis pycom10g03160
rosa_chinensis RchiOBHm_Chr4g0405141
rosa_laevigata RLG00000008869
rosa_multiflora Rmu_co8338777.1_g000001 Rmu_ssc0000255.1_g000039
rosa_roxburghii Rroxscaffold_5G00349370
rosa_rugosa Rorug04G0054000 Rorug04G0054100
rosa_samantha Rh4BG122500 Rh4CG136300 Rh4DG122700
rosa_wichuraiana Rw4G010430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AatII GACGTC 1 cut(s) 426
AccB7I CCANNNNNTGG 1 cut(s) 114
AccBSI CCGCTC 2 cut(s) 30, 270
AccII CGCG 1 cut(s) 905
AccIII TCCGGA 1 cut(s) 553
AciI CCGC 9 cut(s) 25, 28, 67, 268, 286, 324, 610, 899, 905
AclWI GGATC 1 cut(s) 513
AcsI RAATTY 5 cut(s) 278, 311, 641, 1582, 1840
AcuI CTGAAG 1 cut(s) 402
AcyI GRCGYC 1 cut(s) 423
AfaI GTAC 2 cut(s) 398, 1744
AfiI CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
AgsI TTSAA 8 cut(s) 442, 499, 802, 873, 1106, 1367, 1435, 1840
AhlI ACTAGT 1 cut(s) 1883
AjnI CCWGG 2 cut(s) 1189, 1753
AloI GAACNNNNNNTCC 2 cut(s) 782, 814
Alw21I GWGCWC 2 cut(s) 369, 393
Alw26I GTCTC 4 cut(s) 9, 117, 846, 1349
AlwI GGATC 1 cut(s) 513
Ama87I CYCGRG 1 cut(s) 1024
Aor13HI TCCGGA 1 cut(s) 553
AoxI GGCC 2 cut(s) 130, 167
ApeKI GCWGC 1 cut(s) 857
ApoI RAATTY 5 cut(s) 278, 311, 641, 1582, 1840
AspS9I GGNCC 3 cut(s) 118, 597, 1258
AsuC2I CCSGG 3 cut(s) 321, 1025, 1026
AsuHPI GGTGA 2 cut(s) 1013, 1136
AsuII TTCGAA 1 cut(s) 734
AvaI CYCGRG 1 cut(s) 1024
AvaII GGWCC 3 cut(s) 118, 597, 1258
AxyI CCTNAGG 1 cut(s) 164
BanII GRGCYC 1 cut(s) 393
BauI CACGAG 1 cut(s) 914
BbsI GAAGAC 2 cut(s) 950, 980
Bbv12I GWGCWC 2 cut(s) 369, 393
BbvI GCAGC 1 cut(s) 869
BceAI ACGGC 3 cut(s) 5, 128, 190
BcgI CGANNNNNNTGC 2 cut(s) 1168, 1202
BciT130I CCWGG 2 cut(s) 1191, 1755
BciVI GTATCC 1 cut(s) 561
BclI TGATCA 1 cut(s) 174
BcnI CCSGG 3 cut(s) 321, 1025, 1026
BcoDI GTCTC 4 cut(s) 9, 117, 846, 1349
BcuI ACTAGT 1 cut(s) 1883
BfaI CTAG 6 cut(s) 699, 1473, 1545, 1617, 1791, 1884
BfuI GTATCC 1 cut(s) 561
BglII AGATCT 1 cut(s) 1688
BisI GCNGC 3 cut(s) 28, 325, 858
BlsI GCNGC 3 cut(s) 29, 326, 859
Bme1390I CCNGG 5 cut(s) 321, 1025, 1026, 1191, 1755
Bme18I GGWCC 3 cut(s) 118, 597, 1258
BmeT110I CYCGRG 1 cut(s) 1024
BmgT120I GGNCC 3 cut(s) 118, 597, 1258
BmiI GGNNCC 3 cut(s) 119, 598, 936
BmrFI CCNGG 5 cut(s) 321, 1025, 1026, 1191, 1755
BpiI GAAGAC 2 cut(s) 950, 980
BplI GAGNNNNNCTC 2 cut(s) 237, 269
Bpu14I TTCGAA 1 cut(s) 734
BpuEI CTTGAG 1 cut(s) 1188
BpuMI CCSGG 3 cut(s) 321, 1025, 1026
BsaBI GATNNNNATC 2 cut(s) 179, 1344
BsaHI GRCGYC 1 cut(s) 423
BsaI GGTCTC 1 cut(s) 117
BsaJI CCNNGG 4 cut(s) 127, 319, 1024, 1753
BsaWI WCCGGW 1 cut(s) 553
BsaXI ACNNNNNCTCC 4 cut(s) 611, 641, 1758, 1788
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
Bse118I RCCGGY 1 cut(s) 432
Bse1I ACTGG 1 cut(s) 1135
Bse21I CCTNAGG 1 cut(s) 164
Bse3DI GCAATG 1 cut(s) 720
Bse8I GATNNNNATC 2 cut(s) 179, 1344
BseAI TCCGGA 1 cut(s) 553
BseBI CCWGG 2 cut(s) 1191, 1755
BseDI CCNNGG 4 cut(s) 127, 319, 1024, 1753
BseGI GGATG 6 cut(s) 46, 282, 1111, 1609, 1681, 1744
BseJI GATNNNNATC 2 cut(s) 179, 1344
BseLI CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
BseMI GCAATG 1 cut(s) 720
BseMII CTCAG 4 cut(s) 65, 178, 537, 1245
BseNI ACTGG 1 cut(s) 1135
BseXI GCAGC 1 cut(s) 869
BsgI GTGCAG 1 cut(s) 896
Bsh1236I CGCG 1 cut(s) 905
Bsh1285I CGRYCG 1 cut(s) 903
BshFI GGCC 2 cut(s) 132, 169
BsiEI CGRYCG 1 cut(s) 903
BsiHKAI GWGCWC 2 cut(s) 369, 393
BsiHKCI CYCGRG 1 cut(s) 1024
BsiSI CCGG 5 cut(s) 321, 349, 433, 554, 1025
BslFI GGGAC 3 cut(s) 199, 527, 1579
BslI CCNNNNNNNGG 4 cut(s) 114, 150, 348, 454
BsmAI GTCTC 4 cut(s) 9, 117, 846, 1349
BsmFI GGGAC 3 cut(s) 199, 527, 1579
BsnI GGCC 2 cut(s) 132, 169
Bso31I GGTCTC 1 cut(s) 117
BsoBI CYCGRG 1 cut(s) 1024
Bsp119I TTCGAA 1 cut(s) 734
Bsp1286I GDGCHC 2 cut(s) 369, 393
Bsp13I TCCGGA 1 cut(s) 553
Bsp143I GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
BspACI CCGC 9 cut(s) 25, 28, 67, 268, 286, 324, 610, 899, 905
BspANI GGCC 2 cut(s) 132, 169
BspCNI CTCAG 4 cut(s) 64, 177, 538, 1246
BspEI TCCGGA 1 cut(s) 553
BspFNI CGCG 1 cut(s) 905
BspHI TCATGA 2 cut(s) 255, 520
BspLI GGNNCC 3 cut(s) 119, 598, 936
BspPI GGATC 1 cut(s) 513
BspQI GCTCTTC 3 cut(s) 381, 1462, 1534
BspT104I TTCGAA 1 cut(s) 734
BspTNI GGTCTC 1 cut(s) 117
BsrBI CCGCTC 2 cut(s) 30, 270
BsrDI GCAATG 1 cut(s) 720
BsrFI RCCGGY 1 cut(s) 432
BsrI ACTGG 1 cut(s) 1135
BssAI RCCGGY 1 cut(s) 432
BssECI CCNNGG 4 cut(s) 127, 319, 1024, 1753
BssMI GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
BssNI GRCGYC 1 cut(s) 423
BssSI CACGAG 1 cut(s) 914
Bst2BI CACGAG 1 cut(s) 914
Bst2UI CCWGG 2 cut(s) 1191, 1755
Bst4CI ACNGT 2 cut(s) 1066, 1159
Bst6I CTCTTC 5 cut(s) 381, 1239, 1390, 1462, 1534
BstACI GRCGYC 1 cut(s) 423
BstBI TTCGAA 1 cut(s) 734
BstC8I GCNNGC 2 cut(s) 577, 1008
BstDEI CTNAG 6 cut(s) 51, 164, 538, 546, 1254, 1890
BstF5I GGATG 6 cut(s) 46, 282, 1111, 1609, 1681, 1744
BstFNI CGCG 1 cut(s) 905
BstKTI GATC 8 cut(s) 177, 373, 493, 508, 1111, 1182, 1348, 1691
BstMAI GTCTC 4 cut(s) 9, 117, 846, 1349
BstMBI GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
BstMCI CGRYCG 1 cut(s) 903
BstMWI GCNNNNNNNGC 2 cut(s) 442, 451
BstNI CCWGG 2 cut(s) 1191, 1755
BstSCI CCNGG 5 cut(s) 319, 1023, 1024, 1189, 1753
BstUI CGCG 1 cut(s) 905
BstV1I GCAGC 1 cut(s) 869
BstV2I GAAGAC 2 cut(s) 950, 980
BstX2I RGATCY 2 cut(s) 505, 1688
BstYI RGATCY 2 cut(s) 505, 1688
Bsu36I CCTNAGG 1 cut(s) 164
BsuI GTATCC 1 cut(s) 561
BsuRI GGCC 2 cut(s) 132, 169
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 6 cut(s) 46, 282, 1111, 1609, 1681, 1744
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 2 cut(s) 354, 378
Cac8I GCNNGC 2 cut(s) 577, 1008
CciI TCATGA 2 cut(s) 255, 520
Cfr10I RCCGGY 1 cut(s) 432
Cfr13I GGNCC 3 cut(s) 118, 597, 1258
Cfr9I CCCGGG 1 cut(s) 1024
Csp6I GTAC 2 cut(s) 397, 1743
CviAII CATG 6 cut(s) 256, 344, 394, 521, 1226, 1817
CviQI GTAC 2 cut(s) 397, 1743
DdeI CTNAG 6 cut(s) 51, 164, 538, 546, 1254, 1890
DpnI GATC 8 cut(s) 176, 372, 492, 507, 1110, 1181, 1347, 1690
DpnII GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
Eam1104I CTCTTC 5 cut(s) 381, 1239, 1390, 1462, 1534
EarI CTCTTC 5 cut(s) 381, 1239, 1390, 1462, 1534
EciI GGCGGA 1 cut(s) 14
Ecl136II GAGCTC 1 cut(s) 391
Eco147I AGGCCT 1 cut(s) 132
Eco24I GRGCYC 1 cut(s) 393
Eco31I GGTCTC 1 cut(s) 117
Eco47I GGWCC 3 cut(s) 118, 597, 1258
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 1 cut(s) 402
Eco81I CCTNAGG 1 cut(s) 164
Eco88I CYCGRG 1 cut(s) 1024
EcoICRI GAGCTC 1 cut(s) 391
EcoRI GAATTC 2 cut(s) 278, 641
EcoRII CCWGG 2 cut(s) 1189, 1753
EcoT38I GRGCYC 1 cut(s) 393
FaeI CATG 6 cut(s) 259, 347, 397, 524, 1229, 1820
FalI AAGNNNNNCTT 2 cut(s) 574, 606
FaqI GGGAC 3 cut(s) 199, 527, 1579
FatI CATG 6 cut(s) 255, 343, 393, 520, 1225, 1816
FauI CCCGC 2 cut(s) 275, 603
FauNDI CATATG 1 cut(s) 847
FbaI TGATCA 1 cut(s) 174
Fnu4HI GCNGC 3 cut(s) 28, 325, 858
FokI GGATG 6 cut(s) 33, 269, 1098, 1616, 1688, 1751
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 3 cut(s) 28, 325, 858
FspBI CTAG 6 cut(s) 699, 1473, 1545, 1617, 1791, 1884
GluI GCNGC 3 cut(s) 28, 325, 858
HaeIII GGCC 2 cut(s) 132, 169
HapII CCGG 5 cut(s) 321, 349, 433, 554, 1025
Hin1I GRCGYC 1 cut(s) 423
Hin1II CATG 6 cut(s) 259, 347, 397, 524, 1229, 1820
HincII GTYRAC 1 cut(s) 1318
HindII GTYRAC 1 cut(s) 1318
HindIII AAGCTT 1 cut(s) 669
HinfI GANTC 4 cut(s) 248, 725, 884, 1283
HpaII CCGG 5 cut(s) 321, 349, 433, 554, 1025
HphI GGTGA 2 cut(s) 1013, 1136
Hpy166II GTNNAC 4 cut(s) 337, 1196, 1318, 1745
Hpy8I GTNNAC 4 cut(s) 337, 1196, 1318, 1745
Hpy99I CGWCG 3 cut(s) 20, 149, 428
HpyCH4III ACNGT 2 cut(s) 1066, 1159
HpyCH4IV ACGT 2 cut(s) 15, 423
HpyCH4V TGCA 4 cut(s) 332, 857, 913, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 442, 451
HpyF3I CTNAG 6 cut(s) 51, 164, 538, 546, 1254, 1890
HpySE526I ACGT 2 cut(s) 15, 423
Hsp92I GRCGYC 1 cut(s) 423
Hsp92II CATG 6 cut(s) 259, 347, 397, 524, 1229, 1820
Kpn2I TCCGGA 1 cut(s) 553
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
LguI GCTCTTC 3 cut(s) 381, 1462, 1534
LmnI GCTCC 2 cut(s) 275, 450
Lsp1109I GCAGC 1 cut(s) 869
MaeI CTAG 6 cut(s) 699, 1473, 1545, 1617, 1791, 1884
MaeII ACGT 2 cut(s) 15, 423
MaeIII GTNAC 1 cut(s) 878
MalI GATC 8 cut(s) 176, 372, 492, 507, 1110, 1181, 1347, 1690
MbiI CCGCTC 2 cut(s) 30, 270
MboI GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
MflI RGATCY 2 cut(s) 505, 1688
MhlI GDGCHC 2 cut(s) 369, 393
MluCI AATT 8 cut(s) 278, 311, 641, 750, 1221, 1411, 1582, 1840
MmeI TCCRAC 4 cut(s) 1437, 1581, 1605, 1653
MroI TCCGGA 1 cut(s) 553
MseI TTAA 4 cut(s) 195, 564, 1002, 1118
MslI CAYNNNNRTG 2 cut(s) 342, 1821
MspI CCGG 5 cut(s) 321, 349, 433, 554, 1025
MspR9I CCNGG 5 cut(s) 321, 1025, 1026, 1191, 1755
MvaI CCWGG 2 cut(s) 1191, 1755
MvnI CGCG 1 cut(s) 905
MwoI GCNNNNNNNGC 2 cut(s) 442, 451
NciI CCSGG 3 cut(s) 321, 1025, 1026
NdeI CATATG 1 cut(s) 847
NdeII GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
NlaIII CATG 6 cut(s) 259, 347, 397, 524, 1229, 1820
NlaIV GGNNCC 3 cut(s) 119, 598, 936
NmuCI GTSAC 1 cut(s) 878
NspV TTCGAA 1 cut(s) 734
PagI TCATGA 2 cut(s) 255, 520
PceI AGGCCT 1 cut(s) 132
PciSI GCTCTTC 3 cut(s) 381, 1462, 1534
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PfeI GAWTC 4 cut(s) 248, 725, 884, 1283
PflMI CCANNNNNTGG 1 cut(s) 114
PkrI GCNGC 3 cut(s) 29, 326, 859
Psp124BI GAGCTC 1 cut(s) 393
Psp6I CCWGG 2 cut(s) 1189, 1753
PspGI CCWGG 2 cut(s) 1189, 1753
PspN4I GGNNCC 3 cut(s) 119, 598, 936
PspPI GGNCC 3 cut(s) 118, 597, 1258
PsuI RGATCY 2 cut(s) 505, 1688
RsaI GTAC 2 cut(s) 398, 1744
RsaNI GTAC 2 cut(s) 397, 1743
RseI CAYNNNNRTG 2 cut(s) 342, 1821
SacI GAGCTC 1 cut(s) 393
SapI GCTCTTC 3 cut(s) 381, 1462, 1534
SaqAI TTAA 4 cut(s) 195, 564, 1002, 1118
SatI GCNGC 3 cut(s) 28, 325, 858
Sau3AI GATC 8 cut(s) 174, 370, 490, 505, 1108, 1179, 1345, 1688
Sau96I GGNCC 3 cut(s) 118, 597, 1258
ScrFI CCNGG 5 cut(s) 321, 1025, 1026, 1191, 1755
SduI GDGCHC 2 cut(s) 369, 393
SfuI TTCGAA 1 cut(s) 734
SinI GGWCC 3 cut(s) 118, 597, 1258
SmaI CCCGGG 1 cut(s) 1026
SmiMI CAYNNNNRTG 2 cut(s) 342, 1821
SmlI CTYRAG 1 cut(s) 1203
SmoI CTYRAG 1 cut(s) 1203
SpeI ACTAGT 1 cut(s) 1883
Sse9I AATT 8 cut(s) 278, 311, 641, 750, 1221, 1411, 1582, 1840
SseBI AGGCCT 1 cut(s) 132
SsiI CCGC 9 cut(s) 25, 28, 67, 268, 286, 324, 610, 899, 905
SspMI CTAG 6 cut(s) 699, 1473, 1545, 1617, 1791, 1884
SstI GAGCTC 1 cut(s) 393
StuI AGGCCT 1 cut(s) 132
StyD4I CCNGG 5 cut(s) 319, 1023, 1024, 1189, 1753
TaaI ACNGT 2 cut(s) 1066, 1159
TaiI ACGT 2 cut(s) 18, 426
TaqII GACCGA 2 cut(s) 141, 981
TasI AATT 8 cut(s) 278, 311, 641, 750, 1221, 1411, 1582, 1840
TauI GCSGC 2 cut(s) 30, 327
TfiI GAWTC 4 cut(s) 248, 725, 884, 1283
Tru1I TTAA 4 cut(s) 195, 564, 1002, 1118
Tru9I TTAA 4 cut(s) 195, 564, 1002, 1118
TscAI CASTG 2 cut(s) 361, 385
TseFI GTSAC 1 cut(s) 878
TseI GCWGC 1 cut(s) 857
Tsp45I GTSAC 1 cut(s) 878
TspGWI ACGGA 1 cut(s) 962
TspMI CCCGGG 1 cut(s) 1024
TspRI CASTG 2 cut(s) 361, 385
Van91I CCANNNNNTGG 1 cut(s) 114
VpaK11BI GGWCC 3 cut(s) 118, 597, 1258
XapI RAATTY 5 cut(s) 278, 311, 641, 1582, 1840
XbaI TCTAGA 1 cut(s) 1790
XmaI CCCGGG 1 cut(s) 1024
XspI CTAG 6 cut(s) 699, 1473, 1545, 1617, 1791, 1884
ZraI GACGTC 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.