pycom10g06610

Proton-conducting membrane transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
7705007 .. 7705247
241 bp
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UTR
Exon/CDS
Intron
pycom10g06610.2

Sequence Viewer

Length: 201 bp
ATGTTAAGTCATGGACTGGTTCCTTCAGCCCTTTTTCTATGTGTTGGTGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTCAGTGAGCACCATGCCGAATCTCTCTACCATTTCCTTCTCTTCCACTTTGGCCAATATGAAATTGAACACCACTTCTATGACCGCATCATGGTCCAAATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.28

Weight (kDa)

10.02

Isoelectric Point (pI)

28.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 180
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 1 cut(s) 194
AcuI CTGAAG 1 cut(s) 9
AfiI CCNNNNNNNGG 1 cut(s) 186
AgsI TTSAA 1 cut(s) 163
Alw21I GWGCWC 1 cut(s) 107
AoxI GGCC 1 cut(s) 147
ApoI RAATTY 1 cut(s) 194
AspS9I GGNCC 1 cut(s) 189
AvaII GGWCC 1 cut(s) 189
BalI TGGCCA 1 cut(s) 149
Bbv12I GWGCWC 1 cut(s) 107
Bme18I GGWCC 1 cut(s) 189
BmgT120I GGNCC 1 cut(s) 189
BmiI GGNNCC 1 cut(s) 21
BmsI GCATC 1 cut(s) 191
BsaXI ACNNNNNCTCC 2 cut(s) 84, 114
Bsc4I CCNNNNNNNGG 1 cut(s) 186
Bse1I ACTGG 1 cut(s) 21
BseLI CCNNNNNNNGG 1 cut(s) 186
BseNI ACTGG 1 cut(s) 21
BshFI GGCC 1 cut(s) 149
BsiHKAI GWGCWC 1 cut(s) 107
BslI CCNNNNNNNGG 1 cut(s) 186
BsnI GGCC 1 cut(s) 149
Bsp1286I GDGCHC 1 cut(s) 107
BspACI CCGC 1 cut(s) 180
BspANI GGCC 1 cut(s) 149
BspLI GGNNCC 1 cut(s) 21
BsrI ACTGG 1 cut(s) 21
Bst6I CTCTTC 1 cut(s) 142
BsuRI GGCC 1 cut(s) 149
BtsIMutI CAGTG 1 cut(s) 105
Cfr13I GGNCC 1 cut(s) 189
CviAII CATG 3 cut(s) 11, 109, 186
CviJI RGCY 2 cut(s) 29, 149
CviKI_1 RGCY 2 cut(s) 29, 149
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 1 cut(s) 142
EarI CTCTTC 1 cut(s) 142
Eco47I GGWCC 1 cut(s) 189
Eco57I CTGAAG 1 cut(s) 9
FaeI CATG 3 cut(s) 14, 112, 189
FaiI YATR 9 cut(s) 12, 40, 55, 57, 66, 110, 155, 176, 187
FatI CATG 3 cut(s) 10, 108, 185
HaeIII GGCC 1 cut(s) 149
Hin1II CATG 3 cut(s) 14, 112, 189
HinfI GANTC 2 cut(s) 70, 115
HpyAV CCTTC 2 cut(s) 33, 142
Hsp92II CATG 3 cut(s) 14, 112, 189
LpnPI CCDG 1 cut(s) 2
LweI GCATC 1 cut(s) 191
MboII GAAGA 1 cut(s) 129
MhlI GDGCHC 1 cut(s) 107
MlsI TGGCCA 1 cut(s) 149
MluCI AATT 2 cut(s) 158, 194
MluNI TGGCCA 1 cut(s) 149
MlyI GAGTC 1 cut(s) 64
MnlI CCTC 1 cut(s) 86
Mox20I TGGCCA 1 cut(s) 149
MscI TGGCCA 1 cut(s) 149
MseI TTAA 1 cut(s) 5
MslI CAYNNNNRTG 1 cut(s) 173
Msp20I TGGCCA 1 cut(s) 149
NlaIII CATG 3 cut(s) 14, 112, 189
NlaIV GGNNCC 1 cut(s) 21
PfeI GAWTC 1 cut(s) 115
PleI GAGTC 1 cut(s) 64
PpsI GAGTC 1 cut(s) 64
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 1 cut(s) 189
RseI CAYNNNNRTG 1 cut(s) 173
SaqAI TTAA 1 cut(s) 5
Sau96I GGNCC 1 cut(s) 189
SchI GAGTC 1 cut(s) 64
SduI GDGCHC 1 cut(s) 107
SetI ASST 1 cut(s) 97
SfaNI GCATC 1 cut(s) 191
SgeI CNNG 5 cut(s) 23, 29, 84, 89, 121
SinI GGWCC 1 cut(s) 189
SmiMI CAYNNNNRTG 1 cut(s) 173
Sse9I AATT 2 cut(s) 158, 194
SsiI CCGC 1 cut(s) 180
TaqI TCGA 1 cut(s) 73
TaqII GACCGA 1 cut(s) 75
TasI AATT 2 cut(s) 158, 194
TfiI GAWTC 1 cut(s) 115
Tru1I TTAA 1 cut(s) 5
Tru9I TTAA 1 cut(s) 5
TscAI CASTG 1 cut(s) 105
TspDTI ATGAA 1 cut(s) 170
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 1 cut(s) 105
VpaK11BI GGWCC 1 cut(s) 189
XapI RAATTY 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.