Rh3AG226300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
23317026 .. 23319663
2638 bp
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UTR
Exon/CDS
Intron
Rh3AG226300.1

Sequence Viewer

Length: 180 bp
ATGGTTTTATCAGTAGCACACTGGTTGCTTTGTTCGCTACCACCCGAGAGGCGGCCGAGAAGCAGAAGATTAGAGAGTCAGGCTGAAAATTCATGTATACATAGTGGTCTAATGACAAATGCCGATGATGGCGGAAGCTCGGAAAGTAGCCGTATGATGAGGAAGGCGGGGCTGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

6.53

Weight (kDa)

8.94

Isoelectric Point (pI)

77.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 97
AciI CCGC 3 cut(s) 52, 132, 167
AcoI YGGCCR 1 cut(s) 53
AcsI RAATTY 1 cut(s) 88
AfiI CCNNNNNNNGG 1 cut(s) 51
AluBI AGCT 1 cut(s) 138
AluI AGCT 1 cut(s) 138
Ama87I CYCGRG 1 cut(s) 44
AoxI GGCC 1 cut(s) 53
ApoI RAATTY 1 cut(s) 88
AvaI CYCGRG 1 cut(s) 44
BccI CCATC 1 cut(s) 122
BceAI ACGGC 1 cut(s) 135
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
BmeT110I CYCGRG 1 cut(s) 44
Bsc4I CCNNNNNNNGG 1 cut(s) 51
Bse1I ACTGG 1 cut(s) 26
BseLI CCNNNNNNNGG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 26
BseX3I CGGCCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 56
BshFI GGCC 1 cut(s) 55
BsiEI CGRYCG 1 cut(s) 56
BsiHKCI CYCGRG 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 51
BsnI GGCC 1 cut(s) 55
BsoBI CYCGRG 1 cut(s) 44
BspACI CCGC 3 cut(s) 52, 132, 167
BspANI GGCC 1 cut(s) 55
BsrI ACTGG 1 cut(s) 26
BssNAI GTATAC 1 cut(s) 98
Bst1107I GTATAC 1 cut(s) 98
BstMCI CGRYCG 1 cut(s) 56
BstMWI GCNNNNNNNGC 1 cut(s) 34
BstZ17I GTATAC 1 cut(s) 98
BstZI CGGCCG 1 cut(s) 53
BsuRI GGCC 1 cut(s) 55
BtsIMutI CAGTG 1 cut(s) 19
CviAII CATG 1 cut(s) 93
CviJI RGCY 5 cut(s) 55, 83, 138, 150, 172
CviKI_1 RGCY 5 cut(s) 55, 83, 138, 150, 172
EaeI YGGCCR 1 cut(s) 53
EagI CGGCCG 1 cut(s) 53
EciI GGCGGA 1 cut(s) 147
EclXI CGGCCG 1 cut(s) 53
Eco52I CGGCCG 1 cut(s) 53
Eco88I CYCGRG 1 cut(s) 44
FaeI CATG 1 cut(s) 96
FaiI YATR 4 cut(s) 94, 98, 102, 155
FatI CATG 1 cut(s) 92
FauI CCCGC 1 cut(s) 160
FblI GTMKAC 1 cut(s) 97
Fnu4HI GCNGC 1 cut(s) 53
Fsp4HI GCNGC 1 cut(s) 53
GluI GCNGC 1 cut(s) 53
HaeIII GGCC 1 cut(s) 55
Hin1II CATG 1 cut(s) 96
HinfI GANTC 1 cut(s) 76
Hpy166II GTNNAC 1 cut(s) 98
Hpy188I TCNGA 1 cut(s) 142
Hpy8I GTNNAC 1 cut(s) 98
HpyAV CCTTC 1 cut(s) 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 34
Hsp92II CATG 1 cut(s) 96
LpnPI CCDG 2 cut(s) 7, 65
MboII GAAGA 1 cut(s) 78
MluCI AATT 1 cut(s) 88
MlyI GAGTC 1 cut(s) 85
MnlI CCTC 2 cut(s) 42, 153
MwoI GCNNNNNNNGC 1 cut(s) 34
NlaIII CATG 1 cut(s) 96
NmeAIII GCCGAG 1 cut(s) 81
PkrI GCNGC 1 cut(s) 54
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
SatI GCNGC 1 cut(s) 53
SchI GAGTC 1 cut(s) 85
SetI ASST 1 cut(s) 140
SgeI CNNG 7 cut(s) 34, 56, 58, 69, 92, 105, 151
Sse9I AATT 1 cut(s) 88
SsiI CCGC 3 cut(s) 52, 132, 167
TasI AATT 1 cut(s) 88
TauI GCSGC 1 cut(s) 55
TscAI CASTG 1 cut(s) 26
TspDTI ATGAA 1 cut(s) 81
TspRI CASTG 1 cut(s) 26
XapI RAATTY 1 cut(s) 88
XmiI GTMKAC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.