pycom10g10910

Protein CHAPERONE-LIKE PROTEIN OF POR1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0009273
Physical Location & Seq
Reverse (-)
14428813 .. 14431008
2196 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g10910.2

Sequence Viewer

Length: 873 bp
ATGGCAGTCACTCTCTCCGTCCGGCCCCACCGCCTCTCCGCCGGCTCCTCCTTCCCCCGCCCGCCCGTCCGCCTCCCCGGCCCGAACGGAATCCGAAAGCCCCCCATGCAATTTGTGCCTTGGAGGGGCTCCATCGTCCCCTCCCGCCGCACATTAACCTGGGCCGCCACGGCCGGCTCCAGGGCCGACGACAACGCGCCGTTCGAGATGTCGGTCGAGAACGCCCTCAAGCTTCTCGGCGTCTCAGACGGCGCGTCGTTCGATGAAATTCTTCGCGCCAAGAACTCGATTGTCGCGGCTTGTAAAGATGACCAGGAGGCGATTGCACAGGTTGAGGCGGCATACGACATGTTGCTTATGAGAAGCTTAACTCAGCGACGGGCGGGGAAAGTTGTGAATAGCAGTGTTCGTTATGCTGATGTAAAGCCAGTGAGTGCTTCTGGGATTGGATCAGTACCTCAGTGGCTGCAGGCTACTGTGAAGAATCCACCCATTGCAGTGGAAACGCCCTCGACGAGTGATCTGGGCGTACAAGTTGGTGTTTATGGAGCTTTGATGGCCTTAACTTATGTCAATGGAGCTTCCGGTTCTTCTTTGGGGCCGTATGGAGGGGCTGATGTTCCTGGACTGATCCTGGCTGGTAGCTTTGGAGCTTCCTTGTACTTCATGACCAAAAAGAATATTAAGTTAGGGAAGGCGACTATCATAACAGTAGGGGGGCTTGTTGCTGGTGCCGTGGTGGGTTCAGCAGTAGAGAATTTTCTGCAAGTAGACATTGTTCCGTTTCTTGGTATCCACTCTCCTGCTGCCGTACAGAGAAAGTCGTGGCTGAACCAAAAACATGGTGGAGTAGGATGGTGGGACAAGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CPP1-like

Protein Analysis

291

Amino Acids

30.54

Weight (kDa)

9.83

Isoelectric Point (pI)

33.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 731
AccI GTMKAC 1 cut(s) 771
AccII CGCG 4 cut(s) 197, 254, 276, 296
AclWI GGATC 2 cut(s) 457, 625
AcoI YGGCCR 1 cut(s) 171
AcsI RAATTY 2 cut(s) 267, 757
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 4 cut(s) 456, 531, 662, 813
AfiI CCNNNNNNNGG 4 cut(s) 125, 180, 608, 788
AflIII ACRYGT 1 cut(s) 348
AhdI GACNNNNNGTC 1 cut(s) 253
AjnI CCWGG 5 cut(s) 158, 179, 312, 622, 633
AluBI AGCT 6 cut(s) 232, 366, 551, 581, 645, 653
AluI AGCT 6 cut(s) 232, 366, 551, 581, 645, 653
Alw26I GTCTC 1 cut(s) 247
AlwI GGATC 2 cut(s) 457, 625
AlwNI CAGNNNCTG 1 cut(s) 466
AoxI GGCC 7 cut(s) 23, 79, 162, 171, 183, 558, 599
ApeKI GCWGC 2 cut(s) 466, 806
ApoI RAATTY 2 cut(s) 267, 757
Asp700I GAANNNNTTC 1 cut(s) 270
AspLEI GCGC 3 cut(s) 199, 254, 278
AspS9I GGNCC 5 cut(s) 24, 80, 162, 183, 599
AsuC2I CCSGG 1 cut(s) 78
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 1 cut(s) 131
BbvI GCAGC 2 cut(s) 453, 793
BccI CCATC 3 cut(s) 140, 550, 849
BceAI ACGGC 6 cut(s) 184, 186, 265, 586, 719, 794
BciT130I CCWGG 5 cut(s) 160, 181, 314, 624, 635
BciVI GTATCC 1 cut(s) 803
BcnI CCSGG 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 247
BfmI CTRYAG 1 cut(s) 467
BfuI GTATCC 1 cut(s) 803
BglI GCCNNNNNGGC 2 cut(s) 78, 170
BisI GCNGC 6 cut(s) 148, 165, 297, 339, 467, 807
BlsI GCNGC 6 cut(s) 149, 166, 298, 340, 468, 808
Bme1390I CCNGG 6 cut(s) 78, 160, 181, 314, 624, 635
BmeRI GACNNNNNGTC 1 cut(s) 253
BmgT120I GGNCC 5 cut(s) 24, 80, 162, 183, 599
BmiI GGNNCC 6 cut(s) 26, 46, 130, 178, 600, 733
BmrFI CCNGG 6 cut(s) 78, 160, 181, 314, 624, 635
BpmI CTGGAG 1 cut(s) 163
BpuEI CTTGAG 1 cut(s) 212
BpuMI CCSGG 1 cut(s) 78
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 6 cut(s) 76, 119, 159, 168, 180, 735
BsaWI WCCGGW 1 cut(s) 584
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 4 cut(s) 125, 180, 608, 788
Bse118I RCCGGY 2 cut(s) 41, 173
Bse1I ACTGG 1 cut(s) 428
Bse3DI GCAATG 1 cut(s) 492
BseBI CCWGG 5 cut(s) 160, 181, 314, 624, 635
BseDI CCNNGG 6 cut(s) 76, 119, 159, 168, 180, 735
BseGI GGATG 1 cut(s) 860
BseLI CCNNNNNNNGG 4 cut(s) 125, 180, 608, 788
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 3 cut(s) 258, 386, 473
BseNI ACTGG 1 cut(s) 428
BseRI GAGGAG 1 cut(s) 37
BseX3I CGGCCG 1 cut(s) 171
BseXI GCAGC 2 cut(s) 453, 793
Bsh1236I CGCG 4 cut(s) 197, 254, 276, 296
Bsh1285I CGRYCG 2 cut(s) 174, 216
BshFI GGCC 7 cut(s) 25, 81, 164, 173, 185, 560, 601
BshNI GGYRCC 1 cut(s) 731
BsiEI CGRYCG 2 cut(s) 174, 216
BsiSI CCGG 5 cut(s) 22, 42, 78, 174, 585
BslFI GGGAC 1 cut(s) 122
BslI CCNNNNNNNGG 4 cut(s) 125, 180, 608, 788
BsmAI GTCTC 1 cut(s) 247
BsmBI CGTCTC 1 cut(s) 247
BsmFI GGGAC 1 cut(s) 122
BsnI GGCC 7 cut(s) 25, 81, 164, 173, 185, 560, 601
Bsp1286I GDGCHC 1 cut(s) 131
Bsp143I GATC 3 cut(s) 449, 520, 630
BspANI GGCC 7 cut(s) 25, 81, 164, 173, 185, 560, 601
BspCNI CTCAG 3 cut(s) 257, 385, 472
BspFNI CGCG 4 cut(s) 197, 254, 276, 296
BspHI TCATGA 1 cut(s) 666
BspLI GGNNCC 6 cut(s) 26, 46, 130, 178, 600, 733
BspMAI CTGCAG 1 cut(s) 471
BspPI GGATC 2 cut(s) 457, 625
BspT107I GGYRCC 1 cut(s) 731
BsrDI GCAATG 1 cut(s) 492
BsrFI RCCGGY 2 cut(s) 41, 173
BsrI ACTGG 1 cut(s) 428
BssAI RCCGGY 2 cut(s) 41, 173
BssECI CCNNGG 6 cut(s) 76, 119, 159, 168, 180, 735
BssMI GATC 3 cut(s) 449, 520, 630
BssNI GRCGYC 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 119
Bst2UI CCWGG 5 cut(s) 160, 181, 314, 624, 635
Bst4CI ACNGT 2 cut(s) 478, 712
BstACI GRCGYC 1 cut(s) 240
BstAPI GCANNNNNTGC 1 cut(s) 115
BstC8I GCNNGC 4 cut(s) 43, 62, 175, 471
BstDEI CTNAG 3 cut(s) 244, 372, 459
BstDSI CCRYGG 2 cut(s) 168, 735
BstF5I GGATG 1 cut(s) 860
BstFNI CGCG 4 cut(s) 197, 254, 276, 296
BstHHI GCGC 3 cut(s) 199, 254, 278
BstKTI GATC 3 cut(s) 452, 523, 633
BstMAI GTCTC 1 cut(s) 247
BstMBI GATC 3 cut(s) 449, 520, 630
BstMCI CGRYCG 2 cut(s) 174, 216
BstMWI GCNNNNNNNGC 5 cut(s) 78, 106, 115, 170, 557
BstNI CCWGG 5 cut(s) 160, 181, 314, 624, 635
BstNSI RCATGY 1 cut(s) 352
BstSCI CCNGG 6 cut(s) 76, 158, 179, 312, 622, 633
BstSFI CTRYAG 1 cut(s) 467
BstUI CGCG 4 cut(s) 197, 254, 276, 296
BstV1I GCAGC 2 cut(s) 453, 793
BstXI CCANNNNNNTGG 2 cut(s) 499, 842
BstZI CGGCCG 1 cut(s) 171
BsuI GTATCC 1 cut(s) 803
BsuRI GGCC 7 cut(s) 25, 81, 164, 173, 185, 560, 601
BtgI CCRYGG 2 cut(s) 168, 735
BtsCI GGATG 1 cut(s) 860
BtsI GCAGTG 2 cut(s) 409, 504
BtsIMutI CAGTG 4 cut(s) 409, 435, 467, 504
Cac8I GCNNGC 4 cut(s) 43, 62, 175, 471
CaiI CAGNNNCTG 1 cut(s) 466
CciI TCATGA 1 cut(s) 666
CfoI GCGC 3 cut(s) 199, 254, 278
Cfr10I RCCGGY 2 cut(s) 41, 173
Cfr13I GGNCC 5 cut(s) 24, 80, 162, 183, 599
CseI GACGC 2 cut(s) 229, 243
Csp6I GTAC 4 cut(s) 455, 530, 661, 812
CviAII CATG 4 cut(s) 106, 349, 667, 842
CviQI GTAC 4 cut(s) 455, 530, 661, 812
DdeI CTNAG 3 cut(s) 244, 372, 459
DpnI GATC 3 cut(s) 451, 522, 632
DpnII GATC 3 cut(s) 449, 520, 630
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 1 cut(s) 171
EagI CGGCCG 1 cut(s) 171
Eam1105I GACNNNNNGTC 1 cut(s) 253
EciI GGCGGA 2 cut(s) 28, 59
EclXI CGGCCG 1 cut(s) 171
Eco130I CCWWGG 1 cut(s) 119
Eco24I GRGCYC 1 cut(s) 131
Eco52I CGGCCG 1 cut(s) 171
EcoRII CCWGG 5 cut(s) 158, 179, 312, 622, 633
EcoT14I CCWWGG 1 cut(s) 119
EcoT38I GRGCYC 1 cut(s) 131
ErhI CCWWGG 1 cut(s) 119
Esp3I CGTCTC 1 cut(s) 247
FaeI CATG 4 cut(s) 109, 352, 670, 845
FaqI GGGAC 1 cut(s) 122
FatI CATG 4 cut(s) 105, 348, 666, 841
FauI CCCGC 4 cut(s) 65, 69, 152, 376
FblI GTMKAC 1 cut(s) 771
Fnu4HI GCNGC 6 cut(s) 148, 165, 297, 339, 467, 807
FokI GGATG 1 cut(s) 867
FriOI GRGCYC 1 cut(s) 131
Fsp4HI GCNGC 6 cut(s) 148, 165, 297, 339, 467, 807
GlaI GCGC 3 cut(s) 198, 253, 277
GluI GCNGC 6 cut(s) 148, 165, 297, 339, 467, 807
GsuI CTGGAG 1 cut(s) 163
HaeIII GGCC 7 cut(s) 25, 81, 164, 173, 185, 560, 601
HapII CCGG 5 cut(s) 22, 42, 78, 174, 585
HgaI GACGC 2 cut(s) 229, 243
HhaI GCGC 3 cut(s) 199, 254, 278
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 4 cut(s) 109, 352, 670, 845
Hin6I GCGC 3 cut(s) 197, 252, 276
HinP1I GCGC 3 cut(s) 197, 252, 276
HindIII AAGCTT 2 cut(s) 230, 364
HinfI GANTC 2 cut(s) 90, 484
HpaII CCGG 5 cut(s) 22, 42, 78, 174, 585
Hpy166II GTNNAC 1 cut(s) 772
Hpy188I TCNGA 3 cut(s) 95, 247, 872
Hpy188III TCNNGA 3 cut(s) 205, 217, 667
Hpy8I GTNNAC 1 cut(s) 772
Hpy99I CGWCG 4 cut(s) 191, 259, 381, 517
HpyAV CCTTC 2 cut(s) 61, 688
HpyCH4III ACNGT 2 cut(s) 478, 712
HpyCH4V TGCA 5 cut(s) 109, 326, 469, 497, 766
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 106, 115, 170, 557
HpyF3I CTNAG 3 cut(s) 244, 372, 459
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 4 cut(s) 109, 352, 670, 845
HspAI GCGC 3 cut(s) 197, 252, 276
KroI GCCGGC 2 cut(s) 41, 173
KroNI GCCGGC 2 cut(s) 43, 175
Kzo9I GATC 3 cut(s) 449, 520, 630
LmnI GCTCC 6 cut(s) 50, 134, 182, 548, 578, 650
Lsp1109I GCAGC 2 cut(s) 453, 793
MaeIII GTNAC 1 cut(s) 7
MalI GATC 3 cut(s) 451, 522, 632
MboI GATC 3 cut(s) 449, 520, 630
MboII GAAGA 3 cut(s) 263, 493, 582
MhlI GDGCHC 1 cut(s) 131
MluCI AATT 3 cut(s) 110, 267, 757
MroNI GCCGGC 2 cut(s) 41, 173
MroXI GAANNNNTTC 1 cut(s) 270
MseI TTAA 4 cut(s) 155, 368, 563, 684
MslI CAYNNNNRTG 1 cut(s) 497
MspI CCGG 5 cut(s) 22, 42, 78, 174, 585
MspR9I CCNGG 6 cut(s) 78, 160, 181, 314, 624, 635
MvaI CCWGG 5 cut(s) 160, 181, 314, 624, 635
MvnI CGCG 4 cut(s) 197, 254, 276, 296
MwoI GCNNNNNNNGC 5 cut(s) 78, 106, 115, 170, 557
NaeI GCCGGC 2 cut(s) 43, 175
NciI CCSGG 1 cut(s) 78
NdeII GATC 3 cut(s) 449, 520, 630
NgoMIV GCCGGC 2 cut(s) 41, 173
NlaIII CATG 4 cut(s) 109, 352, 670, 845
NlaIV GGNNCC 6 cut(s) 26, 46, 130, 178, 600, 733
NmeAIII GCCGAG 1 cut(s) 216
NmuCI GTSAC 1 cut(s) 7
NspI RCATGY 1 cut(s) 352
PagI TCATGA 1 cut(s) 666
PciI ACATGT 1 cut(s) 348
PcsI WCGNNNNNNNCGW 2 cut(s) 201, 512
PdiI GCCGGC 2 cut(s) 43, 175
PdmI GAANNNNTTC 1 cut(s) 270
PfeI GAWTC 2 cut(s) 90, 484
PfoI TCCNGGA 1 cut(s) 622
PkrI GCNGC 6 cut(s) 149, 166, 298, 340, 468, 808
PscI ACATGT 1 cut(s) 348
Psp6I CCWGG 5 cut(s) 158, 179, 312, 622, 633
PspGI CCWGG 5 cut(s) 158, 179, 312, 622, 633
PspN4I GGNNCC 6 cut(s) 26, 46, 130, 178, 600, 733
PspPI GGNCC 5 cut(s) 24, 80, 162, 183, 599
PsrI GAACNNNNNNTAC 2 cut(s) 762, 794
PstI CTGCAG 1 cut(s) 471
PstNI CAGNNNCTG 1 cut(s) 466
RsaI GTAC 4 cut(s) 456, 531, 662, 813
RsaNI GTAC 4 cut(s) 455, 530, 661, 812
RseI CAYNNNNRTG 1 cut(s) 497
SaqAI TTAA 4 cut(s) 155, 368, 563, 684
SatI GCNGC 6 cut(s) 148, 165, 297, 339, 467, 807
Sau3AI GATC 3 cut(s) 449, 520, 630
Sau96I GGNCC 5 cut(s) 24, 80, 162, 183, 599
ScrFI CCNGG 6 cut(s) 78, 160, 181, 314, 624, 635
SduI GDGCHC 1 cut(s) 131
SetI ASST 9 cut(s) 161, 234, 333, 368, 460, 553, 583, 647, 655
SfcI CTRYAG 1 cut(s) 467
SfiI GGCCNNNNNGGCC 1 cut(s) 170
SmiMI CAYNNNNRTG 1 cut(s) 497
SmlI CTYRAG 1 cut(s) 227
SmoI CTYRAG 1 cut(s) 227
Sse9I AATT 3 cut(s) 110, 267, 757
SspI AATATT 1 cut(s) 682
StyD4I CCNGG 6 cut(s) 76, 158, 179, 312, 622, 633
StyI CCWWGG 1 cut(s) 119
TaaI ACNGT 2 cut(s) 478, 712
TaqI TCGA 5 cut(s) 204, 216, 261, 287, 512
TaqII GACCGA 1 cut(s) 202
TasI AATT 3 cut(s) 110, 267, 757
TatI WGTACW 1 cut(s) 660
TauI GCSGC 4 cut(s) 150, 167, 299, 341
TfiI GAWTC 2 cut(s) 90, 484
Tru1I TTAA 4 cut(s) 155, 368, 563, 684
Tru9I TTAA 4 cut(s) 155, 368, 563, 684
TscAI CASTG 4 cut(s) 409, 435, 467, 504
TseFI GTSAC 1 cut(s) 7
TseI GCWGC 2 cut(s) 466, 806
Tsp45I GTSAC 1 cut(s) 7
TspDTI ATGAA 2 cut(s) 279, 655
TspGWI ACGGA 3 cut(s) 7, 102, 771
TspRI CASTG 4 cut(s) 409, 435, 467, 504
XapI RAATTY 2 cut(s) 267, 757
XceI RCATGY 1 cut(s) 352
XcmI CCANNNNNNNNNTGG 1 cut(s) 842
XmiI GTMKAC 1 cut(s) 771
XmnI GAANNNNTTC 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.