pycom10g11260

RPAP1-like, N-terminal

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
14772562 .. 14777890
5329 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g11260.5

Sequence Viewer

Length: 3633 bp
ATGCTCATAGCCATGGCGGAGAAGCAAAGCACCAAAGCAAGCGGTCCAGGCCCGAGGAAGCCGAAGGTCATATTTGGCACCAAAGCACTTCAAACCGACGACGGCGGCGATGCTCCTTCGAGCTTACTCGGCGGCATAGTCGAGAAAGGTATTTCCGATATGCCCCTGTCGGGCCCCACTCCACCGCCTCGCCCAACCGTTCTTCCTTTCCCCGTCGCTCGCCACCGCTCCGATGGCCCGCATCGGGGTCCGGTAAATAGTAAATTGGGTGGTGGGGAAGGGGATGAGGAGGATGATGAAGATGTAATGGACTTTGAACACATTAGGGATTTCGCTAAGCGGGTCGAAAGGAAGAAGAAAAAAGATATGGACTTTAGTAAGTGGGCAGAGGAGGAGCTTGATGCAAATAGCTCAATAACTTTTAGGCAAACAATGGAAGCTAGTAATAGAAAAATTGGGTCAAGTAAAGTGCATTCCCGGCGAAAGAATGAACAAGAATCTGCGTTTGGTAGCTCGAAGATTGAACGAGGATCTGTGTTGGGTAACTTGAAGGTTGAACAAGAATCTGTTTTGGGTCACAATGACATGGAAATTGAAGCGGACATGTACGGAAAGTCCATGCCTGATAATATTCGAAATGAACAAGGGGGGTCTGTGTCGCTTGAGGCTCAGATTGATGAAGAGAACCGTGCACGGTTACAAGGGATGTCTGCAGATGAGATTGAAGAAGCACAGGCGGAGATCATGGGCAGACTGGACCCTGCATTGCTCCAAGTACTCAAAAGGAGGGGTGAAGAGAAATTGAGAAAGCAAAGAGACCCCAGCTCAGATAGCAATGAACCAAAAGCTTCTACTATCTCTCACAGTGGTCCGTCTCATGTGGCTACAGAAATTACTTCAAACAATACTCGAACTTCAGTAAAGGATAGATTGGAGCAGAATTCAGGCAAAGCCAGTGGCAGTTTGTGGAATGCTTGGAGTGATAGAGTCCAGGCTGCTCGGGACTTAAGGTTTTCCTTGGATGGGACTGTTATTATAGATGACTTCCAACAGATATCTCAGAGTAGTAATTTATCTGAGCGTGACTACCTGCGTACTGAGGGGGACCCTGGTGCTGCTGGTTATACAATCAAAGAAGCAGTGTCGCTCACTAGGAGTGTGATTCCTGGACAGCGGACACTTGCCTTGCATTTCCTTTCAACTGTGCTTGATAAGGCATTGCATAATATTCAAGCGCAAGATCAGTTTATCGGAAAAGATGCTAGTAAAGTCGATAAATCTGCTGACTGGGAAGTCAATAAATCTGCTGACTGGGAGGCCATTTGGGCTTATGCACTTGGCCCAGAACCTGAGCTTATTTTATCTCTCAGGATATGTCTCGATGATAACCACAATAATGTAGTCCTAGCTTGTGCCAAAGTTCTTCACCGCATATTAAGCTGTGATGTGAATGAGAACTTCTTTGATGTTTCGGAGAAAATAGCAACCCTGCATATGGACACATTTACCGCCCCTGTATTCAGAAGCAAACCAGAGATTGATGTTGGTTTCCTGCGTGGTGGATTTTGGAAGTACAATGCCAAGCCTTCTAATATTGTTGCTCTCGATGAGGAAATTATTGATGATGAAACTGAAGGGAAACGCACCATTCAAGATGATGTTGTAGTTGCTGGACAAGATTTTGCGGCAGGTTTGGTGCGGATGGGAATCCTTCCAAGGCTTCGCTATGTTCTGGAGTCTGACCCTACGGCAGCTTTGGAAGAATACACAATATCTATACTTACTGCAATTGCAAGGCATTCCCCAAAATGTGCGAATGCAATCATGAATTGTGAAAGGCTTATTGAAACAATTGTCAGCAGATTTATCGAAAAAGACAGTGTAGATATCCAGCCTTCAAAAATAAAGTCTGTTAGACTTCTAAAGGTGATGGCTCAATCTGATCGTATGAACTGTGTTGCTTTTATAAAGAATGGGACTTTCCAAACTATGACATGGCATTTGTATCAATCTATTTCCTTCCTTGACAACTGGGTAAAATCTGGAAAGGAAAACTGTAAACTTTCTTCGGCTTTGAAGGTTGAACAGCTACGTTTTTGGAAGGTTTTTGTTCAGCATGGCTATTGTGTGTCATACTTCTCAGATATTTTCCATAACTTGTGCTTGTGGCTGAACCCACCTACAATTGAAAAACTTATTGAGAATGATGTATTTGGTGAATTTATGTCCATCTCTACGGAAGGATACCTTGTTCTGGAGGCTTTGGCTAGAAGGCTCCCAAGTTTGTTCTCACAGAAGCATCTGAGCAATGAAATCTCTGAGCATTCTGGTGATGGAACTGAGTTCTGGTCTTGGAGCCAGGTTGGTCCAATGGTTGATATAGCTCTCAAGTGGATAGTTTTGAAGAGTGATCCCAGCATATGTAATTTCTTTGAGAGAGAAAATGGAAGTCGTGGTGGTCTTGCTTCCCAAGATTTATCAGTCACTTCCTTGTTATGGGTGTATTCAGCTGTAGTACAAATGCTTTCCAGAGTGCTTGAAAGAGTGGTCCCGGATGATTCTGTCCACTCACATGAAAGTGGTAGTCTTGTGCCATGGCTTCCAGAGTTTGTTCCTAAAGTTGGACTTGAAATGATTAAAAATGGGTTTATAGGCCGTTCAGATACTCTTGATGCGAAATATGGAAAAGATCCTAGCAGAGGTGACTCTTTCATTGAGAAACTGTCTCATTTGAGAAATCTGGGTAAATGCGAAACATCATTAGCTTCTGTAAGTTGCTTACAGGGGTTAGTGGGGCTTGTCATTAGCATTGATAAGTTGATAATGTTAGCCAGGACAGGAGTCCAAACACCTCCCCAAAATTACCCTTCATCAAGAGAAGAGAAAGTACTCAAGGACGGTATACTTAAGGGTTCTTTGGTTGAATTGAGAAGTGTGCAAAATACTTTTATGAAGTTAGTTGCTTCTGAGTGGCCCCTTGTGCAGTCCATTGAGATGTTTGGCAGGGGAGGACCTGCTCCCGGGGTGGGAGTTGGCTGGGGTGCCTCTGGTGGAGGATTTTGGTCTGGTAGTGTTTTGTTGTTGCAAGCAGATGCAAGATTTCTCGTTGACTTGCTTGAAACTTGGAAGCTTGTGTCCAATTTGGAAAGCCCCACAGAAGAAGAAATGACTTTTACTATGCTGGCAATTAATTCATCTTTAGGAGTATGTGTAACTGCTGGACCAACCGGCAGGATTTATGTGAGAAAGGTGTTAAATATTTTGCTTGATGTCTCAGTTCTTAAGTATCTTGATCTCTATATTCGACGTTTTCTTTCATCAAATGGGGGTGTGAAACTGTTTGATTGGGATTATAAAGAAGAGGATTATGTACTTTTCAGTAAAACATTAGCTTCTCATTTCGGCGACAGATGGTTATCCATAAAGAAAAAGCTCAAAGATAGCGTGAATTCCTCTGATAGTAAATCACTGAAAAAGGGTAAAGGTTCCCTCGAGACTATATACGAGGAATCGGACACATCACCTTTGATCACTCATAACGAGAGATTGCACTTCTTTAGTTGTAGAGTGGGCTCACCAGAGACTGCCACTACCCATTTCCTGGTTTCTCAGTCCAATCTCAACCCTTTGTGA

Protein Analysis

1211

Amino Acids

134.39

Weight (kDa)

5.69

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012052)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1967, 3354
AasI GACNNNNNNGTC 1 cut(s) 1292
Acc36I ACCTGC 3 cut(s) 1098, 1679, 3022
AccB1I GGYRCC 2 cut(s) 77, 3041
AccB7I CCANNNNNTGG 1 cut(s) 3601
AccBSI CCGCTC 1 cut(s) 228
AccI GTMKAC 1 cut(s) 2902
AclWI GGATC 3 cut(s) 538, 2405, 2684
AcsI RAATTY 3 cut(s) 940, 2219, 3448
AcuI CTGAAG 2 cut(s) 900, 1653
AfaI GTAC 7 cut(s) 608, 777, 1096, 1574, 2517, 2889, 3372
AflII CTTAAG 3 cut(s) 1006, 2906, 3281
AflIII ACRYGT 1 cut(s) 603
AjnI CCWGG 7 cut(s) 46, 990, 1108, 1165, 2358, 2831, 3600
AjuI GAANNNNNNNTTGG 2 cut(s) 489, 521
AloI GAACNNNNNNTCC 2 cut(s) 2235, 2267
Alw21I GWGCWC 1 cut(s) 694
Alw26I GTCTC 7 cut(s) 810, 879, 1382, 2730, 3277, 3488, 3575
Alw44I GTGCAC 1 cut(s) 690
AlwI GGATC 3 cut(s) 538, 2405, 2684
AlwNI CAGNNNCTG 2 cut(s) 1349, 3584
Ama87I CYCGRG 4 cut(s) 52, 999, 3020, 3491
AoxI GGCC 7 cut(s) 49, 172, 235, 1317, 1339, 2653, 2972
ApaI GGGCCC 1 cut(s) 176
ApaLI GTGCAC 1 cut(s) 690
ApeKI GCWGC 3 cut(s) 995, 1115, 1751
ApoI RAATTY 3 cut(s) 940, 2219, 3448
ArsI GACNNNNNNTTYG 4 cut(s) 1892, 1924, 1984, 2016
AseI ATTAAT 1 cut(s) 3189
AspLEI GCGC 1 cut(s) 1237
AsuC2I CCSGG 4 cut(s) 478, 2552, 3021, 3022
AsuHPI GGTGA 8 cut(s) 803, 1418, 1939, 2228, 2342, 2714, 3513, 3567
AsuII TTCGAA 1 cut(s) 634
AvaI CYCGRG 4 cut(s) 52, 999, 3020, 3491
AvaII GGWCC 9 cut(s) 44, 248, 757, 869, 1105, 2366, 2548, 3011, 3221
BaeGI GKGCMC 2 cut(s) 176, 694
BanI GGYRCC 2 cut(s) 77, 3041
BanII GRGCYC 2 cut(s) 176, 3575
BarI GAAGNNNNNNTAC 4 cut(s) 2050, 2082, 2871, 2903
Bbv12I GWGCWC 1 cut(s) 694
BbvI GCAGC 3 cut(s) 982, 1102, 1763
BccI CCATC 7 cut(s) 227, 1016, 1696, 1924, 2237, 2327, 3405
BceAI ACGGC 3 cut(s) 118, 1764, 2640
BcgI CGANNNNNNTGC 4 cut(s) 1262, 1296, 1849, 1883
BciT130I CCWGG 7 cut(s) 48, 992, 1110, 1167, 2360, 2833, 3602
BciVI GTATCC 1 cut(s) 2237
BclI TGATCA 1 cut(s) 3528
BcnI CCSGG 4 cut(s) 478, 2552, 3021, 3022
BcoDI GTCTC 7 cut(s) 810, 879, 1382, 2730, 3277, 3488, 3575
BfaI CTAG 6 cut(s) 441, 1152, 1263, 1406, 2268, 2694
BfmI CTRYAG 3 cut(s) 711, 885, 2511
BfrI CTTAAG 3 cut(s) 1006, 2906, 3281
BfuAI ACCTGC 3 cut(s) 1098, 1679, 3022
BfuI GTATCC 1 cut(s) 2237
BglI GCCNNNNNGGC 1 cut(s) 1325
BisI GCNGC 6 cut(s) 106, 133, 996, 1116, 1686, 1752
BlpI GCTNAGC 1 cut(s) 336
BlsI GCNGC 6 cut(s) 107, 134, 997, 1117, 1687, 1753
BmcAI AGTACT 2 cut(s) 777, 2889
Bme18I GGWCC 9 cut(s) 44, 248, 757, 869, 1105, 2366, 2548, 3011, 3221
BmeT110I CYCGRG 4 cut(s) 52, 999, 3020, 3491
BmrI ACTGGG 3 cut(s) 1297, 1321, 2041
BmsI GCATC 7 cut(s) 100, 250, 391, 1249, 2308, 2662, 3082
BmuI ACTGGG 3 cut(s) 1297, 1321, 2041
BoxI GACNNNNGTC 1 cut(s) 2840
BpmI CTGGAG 2 cut(s) 1754, 2276
Bpu10I CCTNAGC 1 cut(s) 1350
Bpu1102I GCTNAGC 1 cut(s) 336
Bpu14I TTCGAA 1 cut(s) 634
BpuEI CTTGAG 3 cut(s) 683, 2372, 2876
BpuMI CCSGG 4 cut(s) 478, 2552, 3021, 3022
BsaBI GATNNNNATC 2 cut(s) 1706, 3415
BsaI GGTCTC 1 cut(s) 810
BsaJI CCNNGG 8 cut(s) 12, 53, 1017, 1108, 1715, 2594, 3020, 3021
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 2 cut(s) 3195, 3225
Bse118I RCCGGY 1 cut(s) 3227
Bse1I ACTGG 5 cut(s) 759, 954, 1292, 1316, 2036
Bse3DI GCAATG 4 cut(s) 764, 841, 1217, 2314
Bse8I GATNNNNATC 2 cut(s) 1706, 3415
BseBI CCWGG 7 cut(s) 48, 992, 1110, 1167, 2360, 2833, 3602
BseDI CCNNGG 8 cut(s) 12, 53, 1017, 1108, 1715, 2594, 3020, 3021
BseGI GGATG 6 cut(s) 289, 298, 711, 1027, 1707, 2560
BseJI GATNNNNATC 2 cut(s) 1706, 3415
BseMI GCAATG 4 cut(s) 764, 841, 1217, 2314
BseNI ACTGG 5 cut(s) 759, 954, 1292, 1316, 2036
BseRI GAGGAG 3 cut(s) 302, 404, 407
BseSI GKGCMC 2 cut(s) 176, 694
BseXI GCAGC 3 cut(s) 982, 1102, 1763
BseYI CCCAGC 3 cut(s) 821, 2414, 3036
BsgI GTGCAG 1 cut(s) 3002
BshFI GGCC 7 cut(s) 51, 174, 237, 1319, 1341, 2655, 2974
BshNI GGYRCC 2 cut(s) 77, 3041
BsiHKAI GWGCWC 1 cut(s) 694
BsiHKCI CYCGRG 4 cut(s) 52, 999, 3020, 3491
BsiSI CCGG 5 cut(s) 251, 478, 2552, 3021, 3228
BslFI GGGAC 5 cut(s) 1016, 1039, 1118, 1990, 2534
BsmAI GTCTC 7 cut(s) 810, 879, 1382, 2730, 3277, 3488, 3575
BsmBI CGTCTC 1 cut(s) 879
BsmFI GGGAC 5 cut(s) 1016, 1039, 1118, 1990, 2534
BsmI GAATGC 5 cut(s) 472, 976, 1798, 1822, 2323
BsnI GGCC 7 cut(s) 51, 174, 237, 1319, 1341, 2655, 2974
Bso31I GGTCTC 1 cut(s) 810
BsoBI CYCGRG 4 cut(s) 52, 999, 3020, 3491
Bsp119I TTCGAA 1 cut(s) 634
Bsp120I GGGCCC 1 cut(s) 172
Bsp1286I GDGCHC 3 cut(s) 176, 694, 3575
Bsp143I GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
Bsp1720I GCTNAGC 1 cut(s) 336
Bsp19I CCATGG 2 cut(s) 12, 2594
BspANI GGCC 7 cut(s) 51, 174, 237, 1319, 1341, 2655, 2974
BspHI TCATGA 1 cut(s) 1824
BspMAI CTGCAG 1 cut(s) 715
BspMI ACCTGC 3 cut(s) 1098, 1679, 3022
BspPI GGATC 3 cut(s) 538, 2405, 2684
BspT104I TTCGAA 1 cut(s) 634
BspT107I GGYRCC 2 cut(s) 77, 3041
BspTI CTTAAG 3 cut(s) 1006, 2906, 3281
BspTNI GGTCTC 1 cut(s) 810
BsrBI CCGCTC 1 cut(s) 228
BsrDI GCAATG 4 cut(s) 764, 841, 1217, 2314
BsrFI RCCGGY 1 cut(s) 3227
BsrI ACTGG 5 cut(s) 759, 954, 1292, 1316, 2036
BssAI RCCGGY 1 cut(s) 3227
BssECI CCNNGG 8 cut(s) 12, 53, 1017, 1108, 1715, 2594, 3020, 3021
BssMI GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
BssNAI GTATAC 1 cut(s) 2903
BssT1I CCWWGG 4 cut(s) 12, 1017, 1715, 2594
Bst1107I GTATAC 1 cut(s) 2903
Bst2UI CCWGG 7 cut(s) 48, 992, 1110, 1167, 2360, 2833, 3602
Bst6I CTCTTC 5 cut(s) 675, 789, 2399, 2874, 3354
BstAFI CTTAAG 3 cut(s) 1006, 2906, 3281
BstBI TTCGAA 1 cut(s) 634
BstC8I GCNNGC 5 cut(s) 40, 220, 239, 3087, 3183
BstDSI CCRYGG 2 cut(s) 12, 2594
BstENI CCTNNNNNAGG 1 cut(s) 2697
BstF5I GGATG 6 cut(s) 289, 298, 711, 1027, 1707, 2560
BstHHI GCGC 1 cut(s) 1237
BstKTI GATC 8 cut(s) 533, 744, 1243, 1945, 2413, 2692, 3295, 3531
BstMAI GTCTC 7 cut(s) 810, 879, 1382, 2730, 3277, 3488, 3575
BstMBI GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
BstMWI GCNNNNNNNGC 8 cut(s) 48, 129, 234, 478, 831, 1325, 1437, 2980
BstNI CCWGG 7 cut(s) 48, 992, 1110, 1167, 2360, 2833, 3602
BstNSI RCATGY 1 cut(s) 607
BstPAI GACNNNNGTC 1 cut(s) 2840
BstSFI CTRYAG 3 cut(s) 711, 885, 2511
BstSLI GKGCMC 2 cut(s) 176, 694
BstV1I GCAGC 3 cut(s) 982, 1102, 1763
BstX2I RGATCY 2 cut(s) 530, 2689
BstYI RGATCY 2 cut(s) 530, 2689
BstZ17I GTATAC 1 cut(s) 2903
BsuI GTATCC 1 cut(s) 2237
BsuRI GGCC 7 cut(s) 51, 174, 237, 1319, 1341, 2655, 2974
BtgI CCRYGG 2 cut(s) 12, 2594
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 6 cut(s) 289, 298, 711, 1027, 1707, 2560
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 5 cut(s) 871, 961, 1146, 1885, 3467
BveI ACCTGC 3 cut(s) 1098, 1679, 3022
Cac8I GCNNGC 5 cut(s) 40, 220, 239, 3087, 3183
CaiI CAGNNNCTG 2 cut(s) 1349, 3584
CciI TCATGA 1 cut(s) 1824
CfoI GCGC 1 cut(s) 1237
Cfr10I RCCGGY 1 cut(s) 3227
Cfr9I CCCGGG 1 cut(s) 3020
Csp6I GTAC 7 cut(s) 607, 776, 1095, 1573, 2516, 2888, 3371
CspCI CAANNNNNGTGG 2 cut(s) 937, 972
CviQI GTAC 7 cut(s) 607, 776, 1095, 1573, 2516, 2888, 3371
DpnI GATC 8 cut(s) 532, 743, 1242, 1944, 2412, 2691, 3294, 3530
DpnII GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
DrdI GACNNNNNNGTC 1 cut(s) 1292
DseDI GACNNNNNNGTC 1 cut(s) 1292
Eam1104I CTCTTC 5 cut(s) 675, 789, 2399, 2874, 3354
EarI CTCTTC 5 cut(s) 675, 789, 2399, 2874, 3354
EciI GGCGGA 2 cut(s) 32, 752
Eco130I CCWWGG 4 cut(s) 12, 1017, 1715, 2594
Eco24I GRGCYC 2 cut(s) 176, 3575
Eco31I GGTCTC 1 cut(s) 810
Eco32I GATATC 2 cut(s) 1056, 1888
Eco47I GGWCC 9 cut(s) 44, 248, 757, 869, 1105, 2366, 2548, 3011, 3221
Eco57I CTGAAG 2 cut(s) 900, 1653
Eco88I CYCGRG 4 cut(s) 52, 999, 3020, 3491
EcoNI CCTNNNNNAGG 1 cut(s) 2697
EcoO109I RGGNCCY 3 cut(s) 173, 1105, 3011
EcoRI GAATTC 2 cut(s) 940, 3448
EcoRII CCWGG 7 cut(s) 46, 990, 1108, 1165, 2358, 2831, 3600
EcoRV GATATC 2 cut(s) 1056, 1888
EcoT14I CCWWGG 4 cut(s) 12, 1017, 1715, 2594
EcoT38I GRGCYC 2 cut(s) 176, 3575
ErhI CCWWGG 4 cut(s) 12, 1017, 1715, 2594
Esp3I CGTCTC 1 cut(s) 879
FalI AAGNNNNNCTT 4 cut(s) 2232, 2264, 2610, 2642
FaqI GGGAC 5 cut(s) 1016, 1039, 1118, 1990, 2534
FauI CCCGC 2 cut(s) 246, 333
FauNDI CATATG 2 cut(s) 1494, 2420
FbaI TGATCA 1 cut(s) 3528
FblI GTMKAC 1 cut(s) 2902
Fnu4HI GCNGC 6 cut(s) 106, 133, 996, 1116, 1686, 1752
FokI GGATG 6 cut(s) 296, 305, 718, 1034, 1714, 2567
FriOI GRGCYC 2 cut(s) 176, 3575
Fsp4HI GCNGC 6 cut(s) 106, 133, 996, 1116, 1686, 1752
FspBI CTAG 6 cut(s) 441, 1152, 1263, 1406, 2268, 2694
GlaI GCGC 1 cut(s) 1236
GluI GCNGC 6 cut(s) 106, 133, 996, 1116, 1686, 1752
GsaI CCCAGC 3 cut(s) 825, 2418, 3040
GsuI CTGGAG 2 cut(s) 1754, 2276
HaeIII GGCC 7 cut(s) 51, 174, 237, 1319, 1341, 2655, 2974
HapII CCGG 5 cut(s) 251, 478, 2552, 3021, 3228
HhaI GCGC 1 cut(s) 1237
Hin6I GCGC 1 cut(s) 1235
HinP1I GCGC 1 cut(s) 1235
HincII GTYRAC 1 cut(s) 3109
HindII GTYRAC 1 cut(s) 3109
HindIII AAGCTT 2 cut(s) 846, 3128
HpaII CCGG 5 cut(s) 251, 478, 2552, 3021, 3228
HphI GGTGA 8 cut(s) 803, 1418, 1939, 2228, 2342, 2714, 3513, 3567
Hpy166II GTNNAC 5 cut(s) 692, 2060, 2566, 2903, 3109
Hpy8I GTNNAC 5 cut(s) 692, 2060, 2566, 2903, 3109
Hpy99I CGWCG 4 cut(s) 101, 104, 218, 3309
HpyCH4IV ACGT 2 cut(s) 2092, 3307
HpyF10VI GCNNNNNNNGC 8 cut(s) 48, 129, 234, 478, 831, 1325, 1437, 2980
HpySE526I ACGT 2 cut(s) 2092, 3307
HspAI GCGC 1 cut(s) 1235
KflI GGGWCCC 1 cut(s) 1105
Ksp22I TGATCA 1 cut(s) 3528
Kzo9I GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
LmnI GCTCC 8 cut(s) 118, 233, 394, 774, 934, 2280, 2355, 3022
Lsp1109I GCAGC 3 cut(s) 982, 1102, 1763
LweI GCATC 7 cut(s) 100, 250, 391, 1249, 2308, 2662, 3082
MaeI CTAG 6 cut(s) 441, 1152, 1263, 1406, 2268, 2694
MaeII ACGT 2 cut(s) 2092, 3307
MaeIII GTNAC 7 cut(s) 542, 575, 696, 1082, 2482, 2702, 3211
MalI GATC 8 cut(s) 532, 743, 1242, 1944, 2412, 2691, 3294, 3530
MbiI CCGCTC 1 cut(s) 228
MboI GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
MfeI CAATTG 3 cut(s) 1788, 1851, 2184
MflI RGATCY 2 cut(s) 530, 2689
MhlI GDGCHC 3 cut(s) 176, 694, 3575
MlyI GAGTC 4 cut(s) 996, 1745, 2699, 2850
MmeI TCCRAC 2 cut(s) 1072, 2602
MseI TTAA 7 cut(s) 1007, 1436, 2637, 2907, 3189, 3254, 3282
MslI CAYNNNNRTG 6 cut(s) 11, 1395, 2328, 2571, 2577, 2993
MspA1I CMGCKG 2 cut(s) 1174, 2510
MspCI CTTAAG 3 cut(s) 1006, 2906, 3281
MspI CCGG 5 cut(s) 251, 478, 2552, 3021, 3228
MunI CAATTG 3 cut(s) 1788, 1851, 2184
Mva1269I GAATGC 5 cut(s) 472, 976, 1798, 1822, 2323
MvaI CCWGG 7 cut(s) 48, 992, 1110, 1167, 2360, 2833, 3602
MwoI GCNNNNNNNGC 8 cut(s) 48, 129, 234, 478, 831, 1325, 1437, 2980
NciI CCSGG 4 cut(s) 478, 2552, 3021, 3022
NcoI CCATGG 2 cut(s) 12, 2594
NdeI CATATG 2 cut(s) 1494, 2420
NdeII GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
NmeAIII GCCGAG 1 cut(s) 108
NmuCI GTSAC 4 cut(s) 575, 1082, 2482, 2702
NspI RCATGY 1 cut(s) 607
NspV TTCGAA 1 cut(s) 634
PaeR7I CTCGAG 1 cut(s) 3491
PagI TCATGA 1 cut(s) 1824
PciI ACATGT 1 cut(s) 603
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 5 cut(s) 472, 976, 1798, 1822, 2323
PfeI GAWTC 6 cut(s) 497, 563, 1162, 1707, 2558, 3509
PflMI CCANNNNNTGG 1 cut(s) 3601
PfoI TCCNGGA 2 cut(s) 1165, 2550
PkrI GCNGC 6 cut(s) 107, 134, 997, 1117, 1687, 1753
PleI GAGTC 4 cut(s) 995, 1744, 2699, 2849
PpsI GAGTC 4 cut(s) 995, 1744, 2699, 2849
PpuMI RGGWCCY 2 cut(s) 1105, 3011
PscI ACATGT 1 cut(s) 603
PshAI GACNNNNGTC 1 cut(s) 2840
PshBI ATTAAT 1 cut(s) 3189
PsiI TTATAA 2 cut(s) 1967, 3354
Psp5II RGGWCCY 2 cut(s) 1105, 3011
Psp6I CCWGG 7 cut(s) 46, 990, 1108, 1165, 2358, 2831, 3600
PspFI CCCAGC 3 cut(s) 821, 2414, 3036
PspGI CCWGG 7 cut(s) 46, 990, 1108, 1165, 2358, 2831, 3600
PspOMI GGGCCC 1 cut(s) 172
PspPPI RGGWCCY 2 cut(s) 1105, 3011
PstI CTGCAG 1 cut(s) 715
PstNI CAGNNNCTG 2 cut(s) 1349, 3584
PsuI RGATCY 2 cut(s) 530, 2689
PvuII CAGCTG 1 cut(s) 2510
RsaI GTAC 7 cut(s) 608, 777, 1096, 1574, 2517, 2889, 3372
RsaNI GTAC 7 cut(s) 607, 776, 1095, 1573, 2516, 2888, 3371
RseI CAYNNNNRTG 6 cut(s) 11, 1395, 2328, 2571, 2577, 2993
SaqAI TTAA 7 cut(s) 1007, 1436, 2637, 2907, 3189, 3254, 3282
SatI GCNGC 6 cut(s) 106, 133, 996, 1116, 1686, 1752
Sau3AI GATC 8 cut(s) 530, 741, 1240, 1942, 2410, 2689, 3292, 3528
ScaI AGTACT 2 cut(s) 777, 2889
SchI GAGTC 4 cut(s) 996, 1745, 2699, 2850
SduI GDGCHC 3 cut(s) 176, 694, 3575
SfaNI GCATC 7 cut(s) 100, 250, 391, 1249, 2308, 2662, 3082
SfcI CTRYAG 3 cut(s) 711, 885, 2511
Sfr274I CTCGAG 1 cut(s) 3491
SfuI TTCGAA 1 cut(s) 634
SinI GGWCC 9 cut(s) 44, 248, 757, 869, 1105, 2366, 2548, 3011, 3221
SlaI CTCGAG 1 cut(s) 3491
SmaI CCCGGG 1 cut(s) 3022
SmiMI CAYNNNNRTG 6 cut(s) 11, 1395, 2328, 2571, 2577, 2993
SmlI CTYRAG 7 cut(s) 662, 1006, 2387, 2891, 2906, 3281, 3491
SmoI CTYRAG 7 cut(s) 662, 1006, 2387, 2891, 2906, 3281, 3491
SspI AATATT 4 cut(s) 631, 1228, 1594, 3259
SspMI CTAG 6 cut(s) 441, 1152, 1263, 1406, 2268, 2694
StyI CCWWGG 4 cut(s) 12, 1017, 1715, 2594
TaiI ACGT 2 cut(s) 2095, 3310
TatI WGTACW 5 cut(s) 775, 1572, 2515, 2887, 3370
TauI GCSGC 3 cut(s) 108, 135, 1688
TfiI GAWTC 6 cut(s) 497, 563, 1162, 1707, 2558, 3509
Tru1I TTAA 7 cut(s) 1007, 1436, 2637, 2907, 3189, 3254, 3282
Tru9I TTAA 7 cut(s) 1007, 1436, 2637, 2907, 3189, 3254, 3282
TscAI CASTG 5 cut(s) 871, 961, 1146, 1885, 3474
TseFI GTSAC 4 cut(s) 575, 1082, 2482, 2702
TseI GCWGC 3 cut(s) 995, 1115, 1751
Tsp45I GTSAC 4 cut(s) 575, 1082, 2482, 2702
TspGWI ACGGA 3 cut(s) 624, 861, 2252
TspMI CCCGGG 1 cut(s) 3020
TspRI CASTG 5 cut(s) 871, 961, 1146, 1885, 3474
Van91I CCANNNNNTGG 1 cut(s) 3601
Vha464I CTTAAG 3 cut(s) 1006, 2906, 3281
VneI GTGCAC 1 cut(s) 690
VpaK11BI GGWCC 9 cut(s) 44, 248, 757, 869, 1105, 2366, 2548, 3011, 3221
VspI ATTAAT 1 cut(s) 3189
XagI CCTNNNNNAGG 1 cut(s) 2697
XapI RAATTY 3 cut(s) 940, 2219, 3448
XceI RCATGY 1 cut(s) 607
XcmI CCANNNNNNNNNTGG 1 cut(s) 230
XhoI CTCGAG 1 cut(s) 3491
XmaI CCCGGG 1 cut(s) 3020
XmiI GTMKAC 1 cut(s) 2902
XspI CTAG 6 cut(s) 441, 1152, 1263, 1406, 2268, 2694
ZrmI AGTACT 2 cut(s) 777, 2889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.