Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0005822

Physical Location & Seq

Genomic Coordinates Forward (+)

16301571 .. 16303998

Gene Structure 2428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g12790.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGATAATACCCATTCCGTTTCCACGCTGATAGATTGTACAACATCTAAGATACAACAACTTCAGAAAGCATTTTCTGAGCTTGAGAGCCACCGAGCCGTAACCCTGAACTTGAAGTGGAAAGAACTTGAAGCGCATTTCCACGGTCTTGAAAAGTCCTTAAAGAGGCGTTTTGATGAGCTGGAAAGCCAAGAGAAGGAGTTCGAAACCCGAACAGTTGAAGCCCAAAAACTGTTAGAAAAGCGGCAAGCTGCTGTTGTGGCCAAGGAACAAGCTTCACTGGAGATTCTTCAAAAGAAGAGAGATGCTGCTGCGTATGCTATTACTAATGCTCGAGAGAAGCAAAGGAAGGTATCAACTGAGGAGCCTTCTGTTGTCACTGATGATGGCCAAGGTGAGCCGCCAAGTGTGGAAGAGAAACCACCAGATATGATAGTTTCTGATAGTAACTGCCAAGAAATGAAAAGTCCTGAAATGGTGAGTATAGAGGTGATGTCCTATCCCCAGTTAGCGAAGTTGTGTGAACAGATGGACACAGAAGGTCTCCACACATTTATATCAGATAACCGAAAGAACCTCGCTTCCATAAGGGAGGAAATTCCACTTGCTCTAAGAGCTGCAGCCAACCCTGCCTTATTTGTCTTGGAATCTTTGGAAGACTTTTACCGCCTAGAAGGGCCCAATACAGACCGGAAGAAGGATGCAAACCTGTTGGGTGTCCGTCGAACTTGTATCATGTTGATGGAGTGTCTGAGCACACTACTAACAAACCCAGAATTAGTCTCTGCGTCTGATATAATTACAGAGGAGGTTAAGGATATGGCAGAGGCAATTGCTGAAGAATGGAAGCCGAAGTTGGATGCTCTTGACATGGATGCTAGCAATGGAAACTCACTAGAGGCTCATGCCTTTTTGCAACTTCTTGGAACTTTTGGCATTTCCTCTGGTTTTGATGAGGAAGAACTATTCAGGATAATACCAATGGTTTCGCGTCGTCGCCAAGCAGCTGACCTTTGCCGTTCTCTTGGATTGACTGAGAGAATGCCAGGTGTTATTGAAGTGTTAGTGAATAGTGGACGGCAAATTGATGCAGTTAACTTGGCTTTTGCCTTCGAGTTGACAGAGAAGTTCTCTCCTGTGCCTTTGCTGAAGTCCTACTTGAAAGAGGCAAGAAAAACTTCGCCGGTCAAATCTGGAAATGCATCTCCCACAGCACAGAATGAAGTGAACGACCGAGAGCTGGCTGCCCTTAAGGCTGTGCTCAAGTCCATTGAAGAGCATAAGCTTGAGGAGCAGTATCCAGTGGATCCTCTTCAGAAACGGGTTCTTCAGCTGGAAAAGGCCAAGGCAGACAAGAAGAGGGTGGCTGAAGCAGCAAAGCCTCAGCCCAAGAGACCTCGTGCTAACGGTGTTGGATATGCTCCCCGCGTCACTAATGTTGTTACTGACAAGACTTTCTATCCTAGAGTTGCTGATAACAGGTACCCGCAATACGTGTATGACAGACAGTTTGTTTACCCGGGACCTGCTGACAACCATTGCCCCTCCCTGCTGGGTTCTGCTACGTACAACATGTCTCCTGCTCATGGAAACTACTATGCAACCGGCTACCAGTACCAGCCTGCGGCGTACCTTCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Frigida

Protein Analysis

547

Amino Acids

61.32

Weight (kDa)

5.63

Isoelectric Point (pI)

50.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48385
fragaria_vesca	FvH4_2g17450 FvH4_2g17450 FvH4_2g17450 FvH4_2g17450 FvH4_2g17450 FvH4_2g17450 FvH4_2g17450
malus_domestica	MD05G1153400.v1.1 MD10G1147800.v1.1
prunus_persica	Prupe.8G186800_v2.0.a1 Prupe.8G186800_v2.0.a1
pyrus_communis	pycom05g14780 pycom10g12790
rosa_chinensis	RchiOBHm_Chr6g0282181
rosa_laevigata	RLG00000012904
rosa_multiflora	Rmu_sc0011940.1_g000005 Rmu_sc0011940.1_g000006 Rmu_sc0014549.1_g000009 Rmu_sc0021471.1_g000002
rosa_roxburghii	Rroxscaffold_7G00186420
rosa_rugosa	Rorug06G0145900 Rorug06G0146000
rosa_samantha	Rh6AG259100 Rh6BG262400 Rh6CG261300 Rh6DG253400
rosa_wichuraiana	Rw6G022410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1534
Acc65I	GGTACC	1 cut(s)	1482
AccB1I	GGYRCC	1 cut(s)	1482
AccII	CGCG	2 cut(s)	991, 1428
AciI	CCGC	6 cut(s)	244, 401, 667, 1426, 1487, 1625
AclWI	GGATC	2 cut(s)	1301, 1314
AcoI	YGGCCR	2 cut(s)	261, 388
AcsI	RAATTY	1 cut(s)	597
AcuI	CTGAAG	6 cut(s)	47, 858, 1169, 1298, 1313, 1389
AfaI	GTAC	5 cut(s)	40, 1484, 1568, 1616, 1631
AfiI	CCNNNNNNNGG	6 cut(s)	165, 196, 697, 1240, 1586, 1624
AflII	CTTAAG	1 cut(s)	1250
AflIII	ACRYGT	2 cut(s)	1494, 1572
AgsI	TTSAA	8 cut(s)	115, 131, 152, 221, 293, 1058, 1162, 1274
AjnI	CCWGG	1 cut(s)	1045
AjuI	GAANNNNNNNTTGG	2 cut(s)	839, 871
AloI	GAACNNNNNNTCC	2 cut(s)	566, 598
AluBI	AGCT	9 cut(s)	82, 181, 251, 275, 617, 1007, 1240, 1285, 1333
AluI	AGCT	9 cut(s)	82, 181, 251, 275, 617, 1007, 1240, 1285, 1333
Alw21I	GWGCWC	2 cut(s)	758, 1263
Alw26I	GTCTC	4 cut(s)	548, 787, 1387, 1581
AlwI	GGATC	2 cut(s)	1301, 1314
Ama87I	CYCGRG	2 cut(s)	333, 1519
AoxI	GGCC	4 cut(s)	261, 388, 677, 1341
ApaI	GGGCCC	1 cut(s)	681
ApeKI	GCWGC	8 cut(s)	251, 308, 311, 617, 620, 1004, 1244, 1373
ApoI	RAATTY	1 cut(s)	597
ArsI	GACNNNNNNTTYG	2 cut(s)	1493, 1525
Asp700I	GAANNNNTTC	2 cut(s)	200, 1177
Asp718I	GGTACC	1 cut(s)	1482
AspLEI	GCGC	1 cut(s)	136
AspS9I	GGNCC	3 cut(s)	677, 678, 1523
AsuC2I	CCSGG	2 cut(s)	1520, 1521
AsuHPI	GGTGA	3 cut(s)	407, 490, 502
AsuII	TTCGAA	1 cut(s)	204
AsuNHI	GCTAGC	1 cut(s)	878
AvaI	CYCGRG	2 cut(s)	333, 1519
AvaII	GGWCC	1 cut(s)	1523
BaeGI	GKGCMC	1 cut(s)	681
BalI	TGGCCA	2 cut(s)	263, 390
BamHI	GGATCC	1 cut(s)	1306
BanI	GGYRCC	1 cut(s)	1482
BanII	GRGCYC	1 cut(s)	681
BauI	CACGAG	1 cut(s)	1398
BbsI	GAAGAC	1 cut(s)	663
Bbv12I	GWGCWC	2 cut(s)	758, 1263
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	8 cut(s)	238, 295, 298, 604, 632, 1016, 1231, 1385
BccI	CCATC	3 cut(s)	380, 523, 736
BceAI	ACGGC	3 cut(s)	83, 1002, 1094
BciT130I	CCWGG	1 cut(s)	1047
BciVI	GTATCC	1 cut(s)	1308
BcnI	CCSGG	2 cut(s)	1520, 1521
BcoDI	GTCTC	4 cut(s)	548, 787, 1387, 1581
BfaI	CTAG	4 cut(s)	671, 879, 896, 1464
BfmI	CTRYAG	1 cut(s)	618
BfrI	CTTAAG	1 cut(s)	1250
BfuAI	ACCTGC	1 cut(s)	1534
BfuI	GTATCC	1 cut(s)	1308
BglI	GCCNNNNNGGC	1 cut(s)	1253
Bme1390I	CCNGG	3 cut(s)	1047, 1520, 1521
Bme18I	GGWCC	1 cut(s)	1523
BmeT110I	CYCGRG	2 cut(s)	333, 1519
BmgT120I	GGNCC	3 cut(s)	677, 678, 1523
BmiI	GGNNCC	5 cut(s)	366, 679, 1308, 1484, 1524
BmrFI	CCNGG	3 cut(s)	1047, 1520, 1521
BmrI	ACTGGG	1 cut(s)	499
BmsI	GCATC	6 cut(s)	295, 691, 850, 865, 1078, 1211
BmtI	GCTAGC	1 cut(s)	882
BmuI	ACTGGG	1 cut(s)	499
BpiI	GAAGAC	1 cut(s)	663
BplI	GAGNNNNNCTC	2 cut(s)	1115, 1147
BpmI	CTGGAG	1 cut(s)	302
Bpu10I	CCTNAGC	1 cut(s)	1383
Bpu14I	TTCGAA	1 cut(s)	204
BpuEI	CTTGAG	3 cut(s)	104, 1247, 1307
BpuMI	CCSGG	2 cut(s)	1520, 1521
BsaAI	YACGTR	2 cut(s)	1495, 1566
BsaI	GGTCTC	2 cut(s)	548, 1387
BsaJI	CCNNGG	5 cut(s)	142, 264, 391, 1344, 1519
BsaWI	WCCGGW	1 cut(s)	690
Bsc4I	CCNNNNNNNGG	6 cut(s)	165, 196, 697, 1240, 1586, 1624
Bse118I	RCCGGY	2 cut(s)	1183, 1604
Bse1I	ACTGG	4 cut(s)	285, 505, 1301, 1612
Bse3DI	GCAATG	2 cut(s)	889, 1537
BseBI	CCWGG	1 cut(s)	1047
BseDI	CCNNGG	5 cut(s)	142, 264, 391, 1344, 1519
BseGI	GGATG	3 cut(s)	706, 865, 880
BseLI	CCNNNNNNNGG	6 cut(s)	165, 196, 697, 1240, 1586, 1624
BseMI	GCAATG	2 cut(s)	889, 1537
BseMII	CTCAG	5 cut(s)	69, 351, 743, 1026, 1397
BseNI	ACTGG	4 cut(s)	285, 505, 1301, 1612
BseRI	GAGGAG	3 cut(s)	377, 821, 1304
BseSI	GKGCMC	1 cut(s)	681
BseXI	GCAGC	8 cut(s)	238, 295, 298, 604, 632, 1016, 1231, 1385
BseYI	CCCAGC	1 cut(s)	1552
Bsh1236I	CGCG	2 cut(s)	991, 1428
Bsh1285I	CGRYCG	1 cut(s)	1234
BshFI	GGCC	4 cut(s)	263, 390, 679, 1343
BshNI	GGYRCC	1 cut(s)	1482
BsiEI	CGRYCG	1 cut(s)	1234
BsiHKAI	GWGCWC	2 cut(s)	758, 1263
BsiHKCI	CYCGRG	2 cut(s)	333, 1519
BsiSI	CCGG	4 cut(s)	691, 1184, 1520, 1605
BslFI	GGGAC	1 cut(s)	1536
BslI	CCNNNNNNNGG	6 cut(s)	165, 196, 697, 1240, 1586, 1624
BsmAI	GTCTC	4 cut(s)	548, 787, 1387, 1581
BsmFI	GGGAC	1 cut(s)	1536
BsmI	GAATGC	1 cut(s)	1047
BsnI	GGCC	4 cut(s)	263, 390, 679, 1343
Bso31I	GGTCTC	2 cut(s)	548, 1387
BsoBI	CYCGRG	2 cut(s)	333, 1519
Bsp119I	TTCGAA	1 cut(s)	204
Bsp120I	GGGCCC	1 cut(s)	677
Bsp1286I	GDGCHC	3 cut(s)	681, 758, 1263
Bsp1407I	TGTACA	1 cut(s)	38
Bsp143I	GATC	1 cut(s)	1306
BspACI	CCGC	6 cut(s)	244, 401, 667, 1426, 1487, 1625
BspANI	GGCC	4 cut(s)	263, 390, 679, 1343
BspCNI	CTCAG	5 cut(s)	70, 352, 744, 1027, 1396
BspFNI	CGCG	2 cut(s)	991, 1428
BspLI	GGNNCC	5 cut(s)	366, 679, 1308, 1484, 1524
BspMAI	CTGCAG	1 cut(s)	622
BspMI	ACCTGC	1 cut(s)	1534
BspOI	GCTAGC	1 cut(s)	882
BspPI	GGATC	2 cut(s)	1301, 1314
BspQI	GCTCTTC	1 cut(s)	1269
BspT104I	TTCGAA	1 cut(s)	204
BspT107I	GGYRCC	1 cut(s)	1482
BspTI	CTTAAG	1 cut(s)	1250
BspTNI	GGTCTC	2 cut(s)	548, 1387
BsrDI	GCAATG	2 cut(s)	889, 1537
BsrFI	RCCGGY	2 cut(s)	1183, 1604
BsrGI	TGTACA	1 cut(s)	38
BsrI	ACTGG	4 cut(s)	285, 505, 1301, 1612
BssAI	RCCGGY	2 cut(s)	1183, 1604
BssECI	CCNNGG	5 cut(s)	142, 264, 391, 1344, 1519
BssMI	GATC	1 cut(s)	1306
BssSI	CACGAG	1 cut(s)	1398
BssT1I	CCWWGG	3 cut(s)	264, 391, 1344
Bst2BI	CACGAG	1 cut(s)	1398
Bst2UI	CCWGG	1 cut(s)	1047
Bst4CI	ACNGT	5 cut(s)	146, 217, 234, 1409, 1509
Bst6I	CTCTTC	5 cut(s)	293, 408, 1269, 1317, 1352
BstAFI	CTTAAG	1 cut(s)	1250
BstAUI	TGTACA	1 cut(s)	38
BstBAI	YACGTR	2 cut(s)	1495, 1566
BstBI	TTCGAA	1 cut(s)	204
BstC8I	GCNNGC	4 cut(s)	249, 880, 1242, 1623
BstDEI	CTNAG	7 cut(s)	48, 78, 360, 611, 752, 1035, 1383
BstDSI	CCRYGG	1 cut(s)	142
BstENI	CCTNNNNNAGG	1 cut(s)	163
BstF5I	GGATG	3 cut(s)	706, 865, 880
BstFNI	CGCG	2 cut(s)	991, 1428
BstHHI	GCGC	1 cut(s)	136
BstKTI	GATC	1 cut(s)	1309
BstMAI	GTCTC	4 cut(s)	548, 787, 1387, 1581
BstMBI	GATC	1 cut(s)	1306
BstMCI	CGRYCG	1 cut(s)	1234
BstMWI	GCNNNNNNNGC	7 cut(s)	260, 317, 614, 629, 1253, 1291, 1373
BstNI	CCWGG	1 cut(s)	1047
BstNSI	RCATGY	1 cut(s)	1576
BstSCI	CCNGG	3 cut(s)	1045, 1518, 1519
BstSFI	CTRYAG	1 cut(s)	618
BstSLI	GKGCMC	1 cut(s)	681
BstSNI	TACGTA	1 cut(s)	1566
BstUI	CGCG	2 cut(s)	991, 1428
BstV1I	GCAGC	8 cut(s)	238, 295, 298, 604, 632, 1016, 1231, 1385
BstV2I	GAAGAC	1 cut(s)	663
BstX2I	RGATCY	1 cut(s)	1306
BstYI	RGATCY	1 cut(s)	1306
BsuI	GTATCC	1 cut(s)	1308
BsuRI	GGCC	4 cut(s)	263, 390, 679, 1343
BtgI	CCRYGG	1 cut(s)	142
BtsCI	GGATG	3 cut(s)	706, 865, 880
BtsIMutI	CAGTG	3 cut(s)	278, 378, 1308
BveI	ACCTGC	1 cut(s)	1534
Cac8I	GCNNGC	4 cut(s)	249, 880, 1242, 1623
CfoI	GCGC	1 cut(s)	136
Cfr10I	RCCGGY	2 cut(s)	1183, 1604
Cfr13I	GGNCC	3 cut(s)	677, 678, 1523
Cfr9I	CCCGGG	1 cut(s)	1519
CseI	GACGC	3 cut(s)	777, 980, 1417
Csp6I	GTAC	5 cut(s)	39, 1483, 1567, 1615, 1630
CviAII	CATG	5 cut(s)	736, 871, 905, 1573, 1586
CviQI	GTAC	5 cut(s)	39, 1483, 1567, 1615, 1630
DdeI	CTNAG	7 cut(s)	48, 78, 360, 611, 752, 1035, 1383
DpnI	GATC	1 cut(s)	1308
DpnII	GATC	1 cut(s)	1306
EaeI	YGGCCR	2 cut(s)	261, 388
Eam1104I	CTCTTC	5 cut(s)	293, 408, 1269, 1317, 1352
EarI	CTCTTC	5 cut(s)	293, 408, 1269, 1317, 1352
Eco105I	TACGTA	1 cut(s)	1566
Eco130I	CCWWGG	3 cut(s)	264, 391, 1344
Eco24I	GRGCYC	1 cut(s)	681
Eco31I	GGTCTC	2 cut(s)	548, 1387
Eco47I	GGWCC	1 cut(s)	1523
Eco57I	CTGAAG	6 cut(s)	47, 858, 1169, 1298, 1313, 1389
Eco88I	CYCGRG	2 cut(s)	333, 1519
EcoNI	CCTNNNNNAGG	1 cut(s)	163
EcoO109I	RGGNCCY	2 cut(s)	677, 1523
EcoRII	CCWGG	1 cut(s)	1045
EcoT14I	CCWWGG	3 cut(s)	264, 391, 1344
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	681
ErhI	CCWWGG	3 cut(s)	264, 391, 1344
FaeI	CATG	5 cut(s)	739, 874, 908, 1576, 1589
FalI	AAGNNNNNCTT	4 cut(s)	1142, 1174, 1162, 1194
FaqI	GGGAC	1 cut(s)	1536
FatI	CATG	5 cut(s)	735, 870, 904, 1572, 1585
FauI	CCCGC	2 cut(s)	1433, 1494
FokI	GGATG	3 cut(s)	713, 872, 887
FriOI	GRGCYC	1 cut(s)	681
FspBI	CTAG	4 cut(s)	671, 879, 896, 1464
GlaI	GCGC	1 cut(s)	135
GsaI	CCCAGC	1 cut(s)	1556
GsuI	CTGGAG	1 cut(s)	302
HaeIII	GGCC	4 cut(s)	263, 390, 679, 1343
HapII	CCGG	4 cut(s)	691, 1184, 1520, 1605
HgaI	GACGC	3 cut(s)	777, 980, 1417
HhaI	GCGC	1 cut(s)	136
Hin1II	CATG	5 cut(s)	739, 874, 908, 1576, 1589
Hin6I	GCGC	1 cut(s)	134
HinP1I	GCGC	1 cut(s)	134
HincII	GTYRAC	2 cut(s)	1096, 1119
HindII	GTYRAC	2 cut(s)	1096, 1119
HindIII	AAGCTT	2 cut(s)	273, 1283
HinfI	GANTC	2 cut(s)	286, 647
HpaI	GTTAAC	1 cut(s)	1096
HpaII	CCGG	4 cut(s)	691, 1184, 1520, 1605
HphI	GGTGA	3 cut(s)	407, 490, 502
Hpy166II	GTNNAC	6 cut(s)	524, 1076, 1096, 1119, 1228, 1516
Hpy188I	TCNGA	7 cut(s)	66, 79, 442, 562, 753, 793, 1317
Hpy188III	TCNNGA	6 cut(s)	149, 335, 470, 866, 970, 1194
Hpy8I	GTNNAC	6 cut(s)	524, 1076, 1096, 1119, 1228, 1516
Hpy99I	CGWCG	3 cut(s)	726, 996, 999
HpyAV	CCTTC	7 cut(s)	190, 343, 378, 533, 668, 691, 1120
HpyCH4III	ACNGT	5 cut(s)	146, 217, 234, 1409, 1509
HpyCH4IV	ACGT	2 cut(s)	1494, 1565
HpyCH4V	TGCA	6 cut(s)	620, 704, 916, 1091, 1202, 1601
HpyF10VI	GCNNNNNNNGC	7 cut(s)	260, 317, 614, 629, 1253, 1291, 1373
HpyF3I	CTNAG	7 cut(s)	48, 78, 360, 611, 752, 1035, 1383
HpySE526I	ACGT	2 cut(s)	1494, 1565
Hsp92II	CATG	5 cut(s)	739, 874, 908, 1576, 1589
HspAI	GCGC	1 cut(s)	134
KpnI	GGTACC	1 cut(s)	1486
KspAI	GTTAAC	1 cut(s)	1096
Kzo9I	GATC	1 cut(s)	1306
LguI	GCTCTTC	1 cut(s)	1269
LmnI	GCTCC	3 cut(s)	364, 1291, 1426
Lsp1109I	GCAGC	8 cut(s)	238, 295, 298, 604, 632, 1016, 1231, 1385
LweI	GCATC	6 cut(s)	295, 691, 850, 865, 1078, 1211
MaeI	CTAG	4 cut(s)	671, 879, 896, 1464
MaeII	ACGT	2 cut(s)	1494, 1565
MaeIII	GTNAC	5 cut(s)	100, 376, 446, 1429, 1441
MalI	GATC	1 cut(s)	1308
MboI	GATC	1 cut(s)	1306
MfeI	CAATTG	1 cut(s)	831
MflI	RGATCY	1 cut(s)	1306
MhlI	GDGCHC	3 cut(s)	681, 758, 1263
MlsI	TGGCCA	2 cut(s)	263, 390
MluCI	AATT	5 cut(s)	597, 776, 798, 831, 1083
MluNI	TGGCCA	2 cut(s)	263, 390
MmeI	TCCRAC	2 cut(s)	837, 1393
Mox20I	TGGCCA	2 cut(s)	263, 390
Mph1103I	ATGCAT	1 cut(s)	1204
MroXI	GAANNNNTTC	2 cut(s)	200, 1177
MscI	TGGCCA	2 cut(s)	263, 390
MseI	TTAA	4 cut(s)	161, 813, 1095, 1251
MslI	CAYNNNNRTG	1 cut(s)	740
Msp20I	TGGCCA	2 cut(s)	263, 390
MspA1I	CMGCKG	2 cut(s)	1007, 1333
MspCI	CTTAAG	1 cut(s)	1250
MspI	CCGG	4 cut(s)	691, 1184, 1520, 1605
MspR9I	CCNGG	3 cut(s)	1047, 1520, 1521
MunI	CAATTG	1 cut(s)	831
Mva1269I	GAATGC	1 cut(s)	1047
MvaI	CCWGG	1 cut(s)	1047
MvnI	CGCG	2 cut(s)	991, 1428
MwoI	GCNNNNNNNGC	7 cut(s)	260, 317, 614, 629, 1253, 1291, 1373
NciI	CCSGG	2 cut(s)	1520, 1521
NdeII	GATC	1 cut(s)	1306
NheI	GCTAGC	1 cut(s)	878
NlaIII	CATG	5 cut(s)	739, 874, 908, 1576, 1589
NlaIV	GGNNCC	5 cut(s)	366, 679, 1308, 1484, 1524
NmuCI	GTSAC	2 cut(s)	376, 1429
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	1 cut(s)	1576
NspV	TTCGAA	1 cut(s)	204
PaeR7I	CTCGAG	1 cut(s)	333
PciI	ACATGT	1 cut(s)	1572
PciSI	GCTCTTC	1 cut(s)	1269
PctI	GAATGC	1 cut(s)	1047
PdmI	GAANNNNTTC	2 cut(s)	200, 1177
PfeI	GAWTC	2 cut(s)	286, 647
Ppu21I	YACGTR	2 cut(s)	1495, 1566
PpuMI	RGGWCCY	1 cut(s)	1523
PscI	ACATGT	1 cut(s)	1572
Psp5II	RGGWCCY	1 cut(s)	1523
Psp6I	CCWGG	1 cut(s)	1045
PspFI	CCCAGC	1 cut(s)	1552
PspGI	CCWGG	1 cut(s)	1045
PspN4I	GGNNCC	5 cut(s)	366, 679, 1308, 1484, 1524
PspOMI	GGGCCC	1 cut(s)	677
PspPI	GGNCC	3 cut(s)	677, 678, 1523
PspPPI	RGGWCCY	1 cut(s)	1523
PstI	CTGCAG	1 cut(s)	622
PsuI	RGATCY	1 cut(s)	1306
PvuII	CAGCTG	2 cut(s)	1007, 1333
RsaI	GTAC	5 cut(s)	40, 1484, 1568, 1616, 1631
RsaNI	GTAC	5 cut(s)	39, 1483, 1567, 1615, 1630
RseI	CAYNNNNRTG	1 cut(s)	740
SapI	GCTCTTC	1 cut(s)	1269
SaqAI	TTAA	4 cut(s)	161, 813, 1095, 1251
Sau3AI	GATC	1 cut(s)	1306
Sau96I	GGNCC	3 cut(s)	677, 678, 1523
ScrFI	CCNGG	3 cut(s)	1047, 1520, 1521
SduI	GDGCHC	3 cut(s)	681, 758, 1263
SfaNI	GCATC	6 cut(s)	295, 691, 850, 865, 1078, 1211
SfcI	CTRYAG	1 cut(s)	618
Sfr274I	CTCGAG	1 cut(s)	333
SfuI	TTCGAA	1 cut(s)	204
SinI	GGWCC	1 cut(s)	1523
SlaI	CTCGAG	1 cut(s)	333
SmaI	CCCGGG	1 cut(s)	1521
SmiMI	CAYNNNNRTG	1 cut(s)	740
SmlI	CTYRAG	5 cut(s)	83, 333, 1250, 1262, 1286
SmoI	CTYRAG	5 cut(s)	83, 333, 1250, 1262, 1286
SnaBI	TACGTA	1 cut(s)	1566
Sse9I	AATT	5 cut(s)	597, 776, 798, 831, 1083
SsiI	CCGC	6 cut(s)	244, 401, 667, 1426, 1487, 1625
SspMI	CTAG	4 cut(s)	671, 879, 896, 1464
StyD4I	CCNGG	3 cut(s)	1045, 1518, 1519
StyI	CCWWGG	3 cut(s)	264, 391, 1344
TaaI	ACNGT	5 cut(s)	146, 217, 234, 1409, 1509
TaiI	ACGT	2 cut(s)	1497, 1568
TaqI	TCGA	4 cut(s)	204, 334, 724, 1113
TaqII	GACCGA	1 cut(s)	1248
TasI	AATT	5 cut(s)	597, 776, 798, 831, 1083
TatI	WGTACW	1 cut(s)	38
TauI	GCSGC	3 cut(s)	247, 403, 1628
TfiI	GAWTC	2 cut(s)	286, 647
Tru1I	TTAA	4 cut(s)	161, 813, 1095, 1251
Tru9I	TTAA	4 cut(s)	161, 813, 1095, 1251
TscAI	CASTG	3 cut(s)	285, 385, 1308
TseFI	GTSAC	2 cut(s)	376, 1429
TseI	GCWGC	8 cut(s)	251, 308, 311, 617, 620, 1004, 1244, 1373
Tsp45I	GTSAC	2 cut(s)	376, 1429
TspDTI	ATGAA	2 cut(s)	476, 1236
TspGWI	ACGGA	2 cut(s)	7, 710
TspMI	CCCGGG	1 cut(s)	1519
TspRI	CASTG	3 cut(s)	285, 385, 1308
Vha464I	CTTAAG	1 cut(s)	1250
VpaK11BI	GGWCC	1 cut(s)	1523
XagI	CCTNNNNNAGG	1 cut(s)	163
XapI	RAATTY	1 cut(s)	597
XceI	RCATGY	1 cut(s)	1576
XhoI	CTCGAG	1 cut(s)	333
XmaI	CCCGGG	1 cut(s)	1519
XmnI	GAANNNNTTC	2 cut(s)	200, 1177
XspI	CTAG	4 cut(s)	671, 879, 896, 1464
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.