RLG00000012904

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005822
Physical Location & Seq
Reverse (-)
23682416 .. 23687589
5174 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012904

Sequence Viewer

Length: 1944 bp
ATGAGTCACCCAAGACGACTCTATCTCATACAACCTTCTACCCAAGACACCAACCACAGCAGGCTTCGAGTCGAATCCCCAGCCACCAATGTTCACCATCCGGATACCGTTAGCCACCCAAACATCTATGCCCCCACCAACATGGAGCCTGGCGGGGGGAAAAGGGATTGCTCAGCGGCAGCCACACATCCACCACCACCACCACTCGTAAAGACATGGATTGATCGGGCTCTCGCCGGACTTTCCACACAATTCCATCGGAGCTTTTGGGTTAGGCTTGCTGCAACTACCGATCCTTTGACCATGGAAGATACACACTCAGTTTCTACGCTCATAGATTCTACAACCTCCAAGATACACCAGCTTCAGAAGGCATTTGCTGAACTTGAGGGTCACCGAGCGGTAACCCTGAACTTGAAGTGGAAAGAACTTGAAGAGCACTTCCATGGGCTTGAGAAGTCCTTAAAGAGGCGTTTTCATGAGCTGGAAGGACAAGAAAAGGAGTTTGAAACTAGGACAGTGGAAGCGCAAAGAATGCTAGAAAAGCGGCAAGCAGCTGTTGTCGCCAAGGAAGAAGCTCAACTGGAAACTCTTCAAGAGAAGAGAGATGCTGCCATATATGCCATCACTAATGCTCGAGAGAAGCAAAGGAAGGTATCGACTGAGGAGTCTTCGGTTGTCACTGATGACGGCCGAGGCGGGTCACCAACTGTTGAAGAGAAACCACCAGATGTGATGGTTTCTGATAGTAACTTGGAAGAAGTGACAAGTCCTGAAAATGGGAGCATAGAGGGGATGTCCTATCCCCAGTTAGTGAACTTTTGTGAACAGATGGACTCAGAAGGCCTCCACAAATTTATATCAGATAACCGAAAGAACCTTGCTGCAATAAGGGATGAGATTCCACTTGCATTTAGAGCTGCGGCCAACCCTGCCCTCTTTGTTTTGGAATCTCTGGAAGACTTTTACCGCCTGGAAGGACCCACTATGGATGTGAAGAAGGATTCCAACCTGTTGGGTATCCGTCGAACCTGCATAATGTTGATGGAGTGTCTGAGCATATTGTTAACAAACCCAGAGTTAGCCTCTGCTTCTGATATTATTACAGAGGAGGTTAAGGATATGGCAGAGATGATTGCTGAAGAATGGAAGCCAAAGTTGGATGCTCTTGACATGGATGCTAGCAATGGGAACTCACTGGAGGCTCATGCCTTTTTGCAGCTTCTAGCTACTTTTGGTATTGCTTCCGGTTTTGATGAAGAAGAATTGTTCAGGCTAATTCCAATGGTTTCACGTCGTCGCCAAACAGCTGACCTTTGCCGTTCACTTGGATTGACCGAGAGAATGCCAGGTGTTATTGAAGTATTAGTGAACAGTGGAAGACAAATTGATGCAGTTAACCTGGCTTTTGCATTCGAACTGACAGAGCAGTTCTCTCCTGTGCCTTTGCTAAAGTCCTACTTGAAGGAGGCAAGAAAAGCTTCTTCACCAGTCAAACCTGGGAATGCATCTCCTACTGCACAGAATGAGGTGAGCGAGAGGGAGCTGACTGCTCTTAAGGCGGTGATCAAGTCCATTGAGGAGCATAAGCTTGAGGAGCAGTATCCAGTGGATCCACTCCAAAGACGGGTTGTTCAGCTGGAAAAGGCCAAGGCAGACAAGAAGAGGGTGACTGAAGCTGCAAAGCCTCAACCCAAGAGACCTCGTGCTAATGGTGTCGGATATGGCCCCCGGGTCACTAATGTTGTTGCAGAGAAGACTTTCTATCCTAGAGTTGCTGATAATAGGTACCCACAGTACGTTTATGACAGACAGTTTGTTTACCCCGGACCTGCTGACAACCACTGCCCATCTGTCCTGGGTTCTGCTACTTACAACATGCCCCCTGCTCATGGCAACTACTTTGCAACTGGCTACCAGTATCAGCCTGCGTATCTTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

648

Amino Acids

72.55

Weight (kDa)

5.83

Isoelectric Point (pI)

49.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 267 - 558 3.3e-110 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 667
Acc36I ACCTGC 2 cut(s) 1040, 1840
Acc65I GGTACC 1 cut(s) 1788
AccB1I GGYRCC 1 cut(s) 1788
AccBSI CCGCTC 1 cut(s) 401
AccIII TCCGGA 1 cut(s) 100
AciI CCGC 8 cut(s) 153, 176, 401, 547, 699, 923, 970, 1562
AclWI GGATC 3 cut(s) 287, 1607, 1620
AcoI YGGCCR 2 cut(s) 691, 924
AcsI RAATTY 1 cut(s) 854
AcuI CTGAAG 3 cut(s) 350, 1161, 1695
AfaI GTAC 2 cut(s) 1790, 1799
AfiI CCNNNNNNNGG 5 cut(s) 155, 468, 779, 1627, 1892
AflII CTTAAG 1 cut(s) 1556
AgsI TTSAA 7 cut(s) 418, 434, 509, 596, 716, 1361, 1465
AjiI CACGTC 1 cut(s) 1295
AjnI CCWGG 6 cut(s) 148, 972, 1348, 1401, 1498, 1857
AjuI GAANNNNNNNTTGG 2 cut(s) 1142, 1174
Alw21I GWGCWC 1 cut(s) 441
Alw26I GTCTC 1 cut(s) 1693
AlwI GGATC 3 cut(s) 287, 1607, 1620
Ama87I CYCGRG 2 cut(s) 636, 1731
Aor13HI TCCGGA 1 cut(s) 100
AoxI GGCC 5 cut(s) 691, 844, 924, 1647, 1726
ApeKI GCWGC 8 cut(s) 179, 281, 554, 611, 884, 920, 1219, 1679
ApoI RAATTY 1 cut(s) 854
ArsI GACNNNNNNTTYG 2 cut(s) 1799, 1831
Asp700I GAANNNNTTC 3 cut(s) 591, 1480, 1760
Asp718I GGTACC 1 cut(s) 1788
AspLEI GCGC 1 cut(s) 529
AspS9I GGNCC 3 cut(s) 980, 1727, 1829
AsuC2I CCSGG 3 cut(s) 1732, 1733, 1827
AsuHPI GGTGA 7 cut(s) 86, 386, 696, 1479, 1543, 1576, 1681
AsuII TTCGAA 1 cut(s) 1416
AsuNHI GCTAGC 1 cut(s) 1181
AvaI CYCGRG 2 cut(s) 636, 1731
AvaII GGWCC 2 cut(s) 980, 1829
BamHI GGATCC 1 cut(s) 1612
BanI GGYRCC 1 cut(s) 1788
BanII GRGCYC 1 cut(s) 232
BauI CACGAG 1 cut(s) 1704
BbsI GAAGAC 4 cut(s) 663, 966, 1387, 1763
Bbv12I GWGCWC 1 cut(s) 441
BbvI GCAGC 8 cut(s) 191, 268, 566, 598, 871, 907, 1231, 1666
BccI CCATC 7 cut(s) 105, 264, 632, 730, 826, 1039, 1858
BceAI ACGGC 2 cut(s) 706, 1305
BciT130I CCWGG 6 cut(s) 150, 974, 1350, 1403, 1500, 1859
BciVI GTATCC 3 cut(s) 97, 1031, 1614
BclI TGATCA 1 cut(s) 1566
BcnI CCSGG 3 cut(s) 1732, 1733, 1827
BcoDI GTCTC 1 cut(s) 1693
BfaI CTAG 5 cut(s) 513, 539, 1182, 1226, 1770
BfrI CTTAAG 1 cut(s) 1556
BfuAI ACCTGC 2 cut(s) 1040, 1840
BfuI GTATCC 3 cut(s) 97, 1031, 1614
BlpI GCTNAGC 1 cut(s) 172
Bme1390I CCNGG 9 cut(s) 150, 974, 1350, 1403, 1500, 1732, 1733, 1827, 1859
Bme18I GGWCC 2 cut(s) 980, 1829
BmeT110I CYCGRG 2 cut(s) 636, 1731
BmgBI CACGTC 1 cut(s) 1295
BmgT120I GGNCC 3 cut(s) 980, 1727, 1829
BmiI GGNNCC 5 cut(s) 147, 982, 1614, 1729, 1790
BmrFI CCNGG 9 cut(s) 150, 974, 1350, 1403, 1500, 1732, 1733, 1827, 1859
BmrI ACTGGG 1 cut(s) 802
BmsI GCATC 5 cut(s) 598, 1153, 1168, 1381, 1517
BmtI GCTAGC 1 cut(s) 1185
BmuI ACTGGG 1 cut(s) 802
BpiI GAAGAC 4 cut(s) 663, 966, 1387, 1763
BplI GAGNNNNNCTC 4 cut(s) 1070, 1102, 1418, 1450
BpmI CTGGAG 1 cut(s) 1220
Bpu1102I GCTNAGC 1 cut(s) 172
Bpu14I TTCGAA 1 cut(s) 1416
BpuEI CTTGAG 3 cut(s) 407, 473, 1613
BpuMI CCSGG 3 cut(s) 1732, 1733, 1827
BsaI GGTCTC 1 cut(s) 1693
BsaWI WCCGGW 2 cut(s) 100, 1247
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 468, 779, 1627, 1892
Bse1I ACTGG 7 cut(s) 588, 808, 1203, 1490, 1607, 1915, 1918
Bse3DI GCAATG 1 cut(s) 1192
BseAI TCCGGA 1 cut(s) 100
BseBI CCWGG 6 cut(s) 150, 974, 1350, 1403, 1500, 1859
BseGI GGATG 7 cut(s) 97, 187, 801, 901, 997, 1168, 1183
BseLI CCNNNNNNNGG 5 cut(s) 155, 468, 779, 1627, 1892
BseMI GCAATG 1 cut(s) 1192
BseMII CTCAG 5 cut(s) 186, 333, 654, 852, 1046
BseNI ACTGG 7 cut(s) 588, 808, 1203, 1490, 1607, 1915, 1918
BseRI GAGGAG 4 cut(s) 680, 1124, 1595, 1610
BseX3I CGGCCG 1 cut(s) 691
BseXI GCAGC 8 cut(s) 191, 268, 566, 598, 871, 907, 1231, 1666
BseYI CCCAGC 1 cut(s) 79
BsgI GTGCAG 1 cut(s) 1503
Bsh1285I CGRYCG 1 cut(s) 694
BshFI GGCC 5 cut(s) 693, 846, 926, 1649, 1728
BshNI GGYRCC 1 cut(s) 1788
BsiEI CGRYCG 1 cut(s) 694
BsiHKAI GWGCWC 1 cut(s) 441
BsiHKCI CYCGRG 2 cut(s) 636, 1731
BsiSI CCGG 5 cut(s) 101, 237, 1248, 1732, 1827
BslI CCNNNNNNNGG 5 cut(s) 155, 468, 779, 1627, 1892
BsmAI GTCTC 1 cut(s) 1693
BsmI GAATGC 4 cut(s) 540, 1350, 1412, 1510
BsnI GGCC 5 cut(s) 693, 846, 926, 1649, 1728
Bso31I GGTCTC 1 cut(s) 1693
BsoBI CYCGRG 2 cut(s) 636, 1731
Bsp119I TTCGAA 1 cut(s) 1416
Bsp1286I GDGCHC 2 cut(s) 232, 441
Bsp13I TCCGGA 1 cut(s) 100
Bsp143I GATC 4 cut(s) 223, 292, 1566, 1612
Bsp1720I GCTNAGC 1 cut(s) 172
Bsp19I CCATGG 2 cut(s) 303, 445
BspACI CCGC 8 cut(s) 153, 176, 401, 547, 699, 923, 970, 1562
BspANI GGCC 5 cut(s) 693, 846, 926, 1649, 1728
BspCNI CTCAG 5 cut(s) 185, 332, 655, 851, 1047
BspEI TCCGGA 1 cut(s) 100
BspHI TCATGA 1 cut(s) 478
BspLI GGNNCC 5 cut(s) 147, 982, 1614, 1729, 1790
BspMI ACCTGC 2 cut(s) 1040, 1840
BspOI GCTAGC 1 cut(s) 1185
BspPI GGATC 3 cut(s) 287, 1607, 1620
BspQI GCTCTTC 1 cut(s) 429
BspT104I TTCGAA 1 cut(s) 1416
BspT107I GGYRCC 1 cut(s) 1788
BspTI CTTAAG 1 cut(s) 1556
BspTNI GGTCTC 1 cut(s) 1693
BsrBI CCGCTC 1 cut(s) 401
BsrDI GCAATG 1 cut(s) 1192
BsrI ACTGG 7 cut(s) 588, 808, 1203, 1490, 1607, 1915, 1918
BssMI GATC 4 cut(s) 223, 292, 1566, 1612
BssSI CACGAG 1 cut(s) 1704
BssT1I CCWWGG 4 cut(s) 303, 445, 567, 1650
Bst2BI CACGAG 1 cut(s) 1704
Bst2UI CCWGG 6 cut(s) 150, 974, 1350, 1403, 1500, 1859
Bst4CI ACNGT 6 cut(s) 109, 520, 712, 1376, 1797, 1815
Bst6I CTCTTC 5 cut(s) 429, 596, 597, 711, 1658
BstAFI CTTAAG 1 cut(s) 1556
BstAPI GCANNNNNTGC 1 cut(s) 535
BstBI TTCGAA 1 cut(s) 1416
BstC8I GCNNGC 5 cut(s) 62, 279, 552, 1183, 1929
BstDEI CTNAG 5 cut(s) 172, 319, 663, 838, 1055
BstDSI CCRYGG 2 cut(s) 303, 445
BstEII GGTNACC 3 cut(s) 392, 403, 702
BstENI CCTNNNNNAGG 1 cut(s) 466
BstF5I GGATG 7 cut(s) 97, 187, 801, 901, 997, 1168, 1183
BstHHI GCGC 1 cut(s) 529
BstKTI GATC 4 cut(s) 226, 295, 1569, 1615
BstMAI GTCTC 1 cut(s) 1693
BstMBI GATC 4 cut(s) 223, 292, 1566, 1612
BstMCI CGRYCG 1 cut(s) 694
BstMWI GCNNNNNNNGC 9 cut(s) 535, 544, 563, 620, 917, 932, 1478, 1559, 1597
BstNI CCWGG 6 cut(s) 150, 974, 1350, 1403, 1500, 1859
BstNSI RCATGY 1 cut(s) 1882
BstPI GGTNACC 3 cut(s) 392, 403, 702
BstSCI CCNGG 9 cut(s) 148, 972, 1348, 1401, 1498, 1730, 1731, 1825, 1857
BstV1I GCAGC 8 cut(s) 191, 268, 566, 598, 871, 907, 1231, 1666
BstV2I GAAGAC 4 cut(s) 663, 966, 1387, 1763
BstX2I RGATCY 1 cut(s) 1612
BstXI CCANNNNNNTGG 2 cut(s) 142, 1015
BstYI RGATCY 1 cut(s) 1612
BstZI CGGCCG 1 cut(s) 691
BsuI GTATCC 3 cut(s) 97, 1031, 1614
BsuRI GGCC 5 cut(s) 693, 846, 926, 1649, 1728
BtgI CCRYGG 2 cut(s) 303, 445
BtrI CACGTC 1 cut(s) 1295
BtsCI GGATG 7 cut(s) 97, 187, 801, 901, 997, 1168, 1183
BtsI GCAGTG 1 cut(s) 1843
BtsIMutI CAGTG 6 cut(s) 525, 681, 1196, 1381, 1614, 1843
BveI ACCTGC 2 cut(s) 1040, 1840
Cac8I GCNNGC 5 cut(s) 62, 279, 552, 1183, 1929
CciI TCATGA 1 cut(s) 478
CfoI GCGC 1 cut(s) 529
Cfr13I GGNCC 3 cut(s) 980, 1727, 1829
Cfr9I CCCGGG 1 cut(s) 1731
Csp6I GTAC 2 cut(s) 1789, 1798
CviAII CATG 9 cut(s) 142, 216, 304, 446, 479, 1174, 1208, 1879, 1892
CviQI GTAC 2 cut(s) 1789, 1798
DdeI CTNAG 5 cut(s) 172, 319, 663, 838, 1055
DpnI GATC 4 cut(s) 225, 294, 1568, 1614
DpnII GATC 4 cut(s) 223, 292, 1566, 1612
DrdI GACNNNNNNGTC 1 cut(s) 667
DseDI GACNNNNNNGTC 1 cut(s) 667
EaeI YGGCCR 2 cut(s) 691, 924
EagI CGGCCG 1 cut(s) 691
Eam1104I CTCTTC 5 cut(s) 429, 596, 597, 711, 1658
EarI CTCTTC 5 cut(s) 429, 596, 597, 711, 1658
EclXI CGGCCG 1 cut(s) 691
Eco130I CCWWGG 4 cut(s) 303, 445, 567, 1650
Eco147I AGGCCT 1 cut(s) 846
Eco24I GRGCYC 1 cut(s) 232
Eco31I GGTCTC 1 cut(s) 1693
Eco47I GGWCC 2 cut(s) 980, 1829
Eco52I CGGCCG 1 cut(s) 691
Eco57I CTGAAG 3 cut(s) 350, 1161, 1695
Eco88I CYCGRG 2 cut(s) 636, 1731
Eco91I GGTNACC 3 cut(s) 392, 403, 702
EcoNI CCTNNNNNAGG 1 cut(s) 466
EcoO109I RGGNCCY 1 cut(s) 980
EcoO65I GGTNACC 3 cut(s) 392, 403, 702
EcoRII CCWGG 6 cut(s) 148, 972, 1348, 1401, 1498, 1857
EcoT14I CCWWGG 4 cut(s) 303, 445, 567, 1650
EcoT22I ATGCAT 1 cut(s) 1510
EcoT38I GRGCYC 1 cut(s) 232
ErhI CCWWGG 4 cut(s) 303, 445, 567, 1650
FaeI CATG 9 cut(s) 145, 219, 307, 449, 482, 1177, 1211, 1882, 1895
FalI AAGNNNNNCTT 4 cut(s) 1445, 1477, 1465, 1497
FatI CATG 9 cut(s) 141, 215, 303, 445, 478, 1173, 1207, 1878, 1891
FauI CCCGC 2 cut(s) 146, 692
FbaI TGATCA 1 cut(s) 1566
FokI GGATG 7 cut(s) 84, 174, 808, 908, 1004, 1175, 1190
FriOI GRGCYC 1 cut(s) 232
FspBI CTAG 5 cut(s) 513, 539, 1182, 1226, 1770
GlaI GCGC 1 cut(s) 528
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 1 cut(s) 1220
HaeIII GGCC 5 cut(s) 693, 846, 926, 1649, 1728
HapII CCGG 5 cut(s) 101, 237, 1248, 1732, 1827
HhaI GCGC 1 cut(s) 529
Hin1II CATG 9 cut(s) 145, 219, 307, 449, 482, 1177, 1211, 1882, 1895
Hin6I GCGC 1 cut(s) 527
HinP1I GCGC 1 cut(s) 527
HincII GTYRAC 2 cut(s) 1068, 1399
HindII GTYRAC 2 cut(s) 1068, 1399
HindIII AAGCTT 2 cut(s) 1479, 1589
HpaI GTTAAC 2 cut(s) 1068, 1399
HpaII CCGG 5 cut(s) 101, 237, 1248, 1732, 1827
HphI GGTGA 7 cut(s) 86, 386, 696, 1479, 1543, 1576, 1681
Hpy166II GTNNAC 8 cut(s) 94, 817, 827, 1068, 1325, 1372, 1399, 1822
Hpy188I TCNGA 8 cut(s) 261, 369, 745, 841, 865, 1056, 1096, 1721
Hpy188III TCNNGA 7 cut(s) 101, 479, 596, 638, 773, 956, 1169
Hpy8I GTNNAC 8 cut(s) 94, 817, 827, 1068, 1325, 1372, 1399, 1822
Hpy99I CGWCG 3 cut(s) 1029, 1299, 1302
HpyAV CCTTC 8 cut(s) 45, 364, 482, 646, 836, 971, 994, 1459
HpyCH4III ACNGT 6 cut(s) 109, 520, 712, 1376, 1797, 1815
HpyCH4IV ACGT 2 cut(s) 1294, 1800
HpyF10VI GCNNNNNNNGC 9 cut(s) 535, 544, 563, 620, 917, 932, 1478, 1559, 1597
HpyF3I CTNAG 5 cut(s) 172, 319, 663, 838, 1055
HpySE526I ACGT 2 cut(s) 1294, 1800
Hsp92II CATG 9 cut(s) 145, 219, 307, 449, 482, 1177, 1211, 1882, 1895
HspAI GCGC 1 cut(s) 527
Kpn2I TCCGGA 1 cut(s) 100
KpnI GGTACC 1 cut(s) 1792
Ksp22I TGATCA 1 cut(s) 1566
KspAI GTTAAC 2 cut(s) 1068, 1399
Kzo9I GATC 4 cut(s) 223, 292, 1566, 1612
LguI GCTCTTC 1 cut(s) 429
LmnI GCTCC 6 cut(s) 145, 261, 783, 1543, 1582, 1597
Lsp1109I GCAGC 8 cut(s) 191, 268, 566, 598, 871, 907, 1231, 1666
LweI GCATC 5 cut(s) 598, 1153, 1168, 1381, 1517
MaeI CTAG 5 cut(s) 513, 539, 1182, 1226, 1770
MaeII ACGT 2 cut(s) 1294, 1800
MaeIII GTNAC 9 cut(s) 5, 392, 403, 679, 702, 749, 763, 1669, 1735
MalI GATC 4 cut(s) 225, 294, 1568, 1614
MbiI CCGCTC 1 cut(s) 401
MboI GATC 4 cut(s) 223, 292, 1566, 1612
MflI RGATCY 1 cut(s) 1612
MhlI GDGCHC 2 cut(s) 232, 441
MluCI AATT 5 cut(s) 251, 854, 1265, 1278, 1386
MlyI GAGTC 5 cut(s) 12, 13, 78, 677, 830
MmeI TCCRAC 3 cut(s) 1032, 1140, 1699
Mph1103I ATGCAT 1 cut(s) 1510
MroI TCCGGA 1 cut(s) 100
MroXI GAANNNNTTC 3 cut(s) 591, 1480, 1760
MseI TTAA 5 cut(s) 464, 1067, 1116, 1398, 1557
MslI CAYNNNNRTG 2 cut(s) 140, 444
MspA1I CMGCKG 4 cut(s) 176, 557, 1310, 1639
MspCI CTTAAG 1 cut(s) 1556
MspI CCGG 5 cut(s) 101, 237, 1248, 1732, 1827
MspR9I CCNGG 9 cut(s) 150, 974, 1350, 1403, 1500, 1732, 1733, 1827, 1859
Mva1269I GAATGC 4 cut(s) 540, 1350, 1412, 1510
MvaI CCWGG 6 cut(s) 150, 974, 1350, 1403, 1500, 1859
MwoI GCNNNNNNNGC 9 cut(s) 535, 544, 563, 620, 917, 932, 1478, 1559, 1597
NciI CCSGG 3 cut(s) 1732, 1733, 1827
NcoI CCATGG 2 cut(s) 303, 445
NdeII GATC 4 cut(s) 223, 292, 1566, 1612
NheI GCTAGC 1 cut(s) 1181
NlaIII CATG 9 cut(s) 145, 219, 307, 449, 482, 1177, 1211, 1882, 1895
NlaIV GGNNCC 5 cut(s) 147, 982, 1614, 1729, 1790
NmeAIII GCCGAG 1 cut(s) 719
NmuCI GTSAC 7 cut(s) 5, 392, 679, 702, 763, 1669, 1735
NsiI ATGCAT 1 cut(s) 1510
NspI RCATGY 1 cut(s) 1882
NspV TTCGAA 1 cut(s) 1416
PaeR7I CTCGAG 1 cut(s) 636
PagI TCATGA 1 cut(s) 478
PceI AGGCCT 1 cut(s) 846
PciSI GCTCTTC 1 cut(s) 429
PctI GAATGC 4 cut(s) 540, 1350, 1412, 1510
PdmI GAANNNNTTC 3 cut(s) 591, 1480, 1760
PfeI GAWTC 5 cut(s) 74, 338, 901, 950, 1004
PleI GAGTC 5 cut(s) 12, 12, 77, 676, 830
PpsI GAGTC 5 cut(s) 12, 12, 77, 676, 830
PpuMI RGGWCCY 1 cut(s) 980
Psp5II RGGWCCY 1 cut(s) 980
Psp6I CCWGG 6 cut(s) 148, 972, 1348, 1401, 1498, 1857
PspEI GGTNACC 3 cut(s) 392, 403, 702
PspFI CCCAGC 1 cut(s) 79
PspGI CCWGG 6 cut(s) 148, 972, 1348, 1401, 1498, 1857
PspN4I GGNNCC 5 cut(s) 147, 982, 1614, 1729, 1790
PspPI GGNCC 3 cut(s) 980, 1727, 1829
PspPPI RGGWCCY 1 cut(s) 980
PsuI RGATCY 1 cut(s) 1612
PvuII CAGCTG 3 cut(s) 557, 1310, 1639
RsaI GTAC 2 cut(s) 1790, 1799
RsaNI GTAC 2 cut(s) 1789, 1798
RseI CAYNNNNRTG 2 cut(s) 140, 444
SapI GCTCTTC 1 cut(s) 429
SaqAI TTAA 5 cut(s) 464, 1067, 1116, 1398, 1557
Sau3AI GATC 4 cut(s) 223, 292, 1566, 1612
Sau96I GGNCC 3 cut(s) 980, 1727, 1829
SchI GAGTC 5 cut(s) 12, 13, 78, 677, 830
ScrFI CCNGG 9 cut(s) 150, 974, 1350, 1403, 1500, 1732, 1733, 1827, 1859
SduI GDGCHC 2 cut(s) 232, 441
SfaNI GCATC 5 cut(s) 598, 1153, 1168, 1381, 1517
Sfr274I CTCGAG 1 cut(s) 636
SfuI TTCGAA 1 cut(s) 1416
SinI GGWCC 2 cut(s) 980, 1829
SlaI CTCGAG 1 cut(s) 636
SmaI CCCGGG 1 cut(s) 1733
SmiMI CAYNNNNRTG 2 cut(s) 140, 444
SmlI CTYRAG 5 cut(s) 386, 452, 636, 1556, 1592
SmoI CTYRAG 5 cut(s) 386, 452, 636, 1556, 1592
Sse9I AATT 5 cut(s) 251, 854, 1265, 1278, 1386
SseBI AGGCCT 1 cut(s) 846
SsiI CCGC 8 cut(s) 153, 176, 401, 547, 699, 923, 970, 1562
SspMI CTAG 5 cut(s) 513, 539, 1182, 1226, 1770
StuI AGGCCT 1 cut(s) 846
StyD4I CCNGG 9 cut(s) 148, 972, 1348, 1401, 1498, 1730, 1731, 1825, 1857
StyI CCWWGG 4 cut(s) 303, 445, 567, 1650
TaaI ACNGT 6 cut(s) 109, 520, 712, 1376, 1797, 1815
TaiI ACGT 2 cut(s) 1297, 1803
TaqI TCGA 6 cut(s) 67, 72, 637, 659, 1027, 1416
TaqII GACCGA 1 cut(s) 1352
TasI AATT 5 cut(s) 251, 854, 1265, 1278, 1386
TauI GCSGC 3 cut(s) 179, 550, 926
TfiI GAWTC 5 cut(s) 74, 338, 901, 950, 1004
Tru1I TTAA 5 cut(s) 464, 1067, 1116, 1398, 1557
Tru9I TTAA 5 cut(s) 464, 1067, 1116, 1398, 1557
TscAI CASTG 6 cut(s) 525, 688, 1203, 1381, 1614, 1850
TseFI GTSAC 7 cut(s) 5, 392, 679, 702, 763, 1669, 1735
TseI GCWGC 8 cut(s) 179, 281, 554, 611, 884, 920, 1219, 1679
Tsp45I GTSAC 7 cut(s) 5, 392, 679, 702, 763, 1669, 1735
TspDTI ATGAA 2 cut(s) 467, 1272
TspGWI ACGGA 1 cut(s) 1013
TspMI CCCGGG 1 cut(s) 1731
TspRI CASTG 6 cut(s) 525, 688, 1203, 1381, 1614, 1850
Vha464I CTTAAG 1 cut(s) 1556
VpaK11BI GGWCC 2 cut(s) 980, 1829
XagI CCTNNNNNAGG 1 cut(s) 466
XapI RAATTY 1 cut(s) 854
XceI RCATGY 1 cut(s) 1882
XhoI CTCGAG 1 cut(s) 636
XmaI CCCGGG 1 cut(s) 1731
XmnI GAANNNNTTC 3 cut(s) 591, 1480, 1760
XspI CTAG 5 cut(s) 513, 539, 1182, 1226, 1770
Zsp2I ATGCAT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.