RchiOBHm_Chr6g0282181

Belongs to the Frigida family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0005822
Physical Location & Seq
Forward (+)
45517647 .. 45521820
4174 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25311

Sequence Viewer

Length: 1641 bp
ATGGAAGATACACACTCAGTTTCTACGCTCATAGATTCTACAACCTCCAAGATACACCAGCTTCAGAAGGCATTTGCTGAACTTGAGGGTCACCGAGCGGTAACCCTAAACTTGAAGTGGAAAGAACTTGAAGAGCACTTCCATGGGCTTGAGAAGTCCTTAAAGAGGCGTTTTCATGAGCTGGAAGGACAAGAAAAGGAGTTTGAAACTAGGACAGTGGAAGCGCAAAGAATGCTAGAAAAGCGGCAAGCAGCTGTTGTCGCCAAGGAAGAAGCTCAACTGGAAACTCTTCAAGAGAAGAGAGATGCTGCCATATATGCCATCACTAATGCTCGAGAGAAGCAAAGGAAGGTATCGACTGAGGAGTCTTCTGTTGTCACTGATGACGGCCAAGGCGGATCACCAACTGTTGAAGAGAAACCACCAGATGTGATGGTTTCTGATAGTAACTTGGAAGAAGTGACAAGTGCTGAAAATGGGAGCATAGAGGGGATGTCCTATCCCCAGTTAGTGAACTTTTGTGAACAGATGGACTCAGAAGGCCTCCACAAGTTTATATCAGATAACCGAAAGAACCTTGCTGCAATAAGGGAGGAGATTCCACTTGCATTTAGAGCTGCGGCCAACCCTGCCCTCTTTGTTTTGGAATCTCTGGAAGACTTTTACCGCATGGAAGGACCCACTATGGATGTGAAGAAGGATTCCAACCTGTTGGGTATCCGTCGAACCTGCATAATGTTGATGGAGTGTCTGAGCATATTGTTAACAAGCCCAGAGTTAGCCTCTGCTTCTGATATTATTACAGAGGAGGTTAAGGATATGGCAGAGATGATTGCTGAAGAATGGAAGCCAAAGTTGGATGCTCTTGACATGGATGCTAGCAATGGGAACTCACTGGAGGCTCATGCCTTTTTGCAGCTTCTAGCTACTTTTGGTATTGCTTCCGGTTTTGATGAAGAAGAATTGTTCAGGCTAATTCCAATGGTTTCACGTCGTCGCCAAACAGCTGACCTTTGCCGTTCACTTGGATTGACCGAGAGAATGCCAGGTGTTATTGAAGTATTAGTGAACAGTGGAAGACAAATTGATGCAGTTAACCTGGCTTTTGCATTCGAACTGACAGAGCAGTTCTCTCCTGTGCCTTTGCTAAAGTCCTACTTGAAGGAGGCAAGAAAAGCTTCTTCACCAGTCAAACCTGGGAATGCATCTCCTACTGCACAGAATGAGGTGAGCGAGAGAGAGCTGACTGCTCTTAAGGCGGTGATCAAGTCCATTGAGGAGCATAAGCTTGAGGAGCAGTATCCAGTGGATCCACTCCAAAGACGGGTTGTTCAGCTGGAAAAGGCCAAGGCAGACAAGAAGAGGGTAACTGAAGCTGCAAAGCCTCAACCCAAGAGACCTCGTGCTAATGGTGTCGGATATGGCCCCCGGGTCACTAATGTTGTTGCAGAGAAGACTTTCTATCCTAGAGTCGCTGATAATAGGTACCCACAGTACGTTTATGACAGACAGTTTGTTTACCCCGGACCTGCTGACAACCACTGCCCATCTGTCCTGGGTTCTGCTACTTACAACATGCCCCCTGCTCATGGCAACTACTTTGCAACTGGCTACCAGTATCAGCCTGCGTATCTTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

546

Amino Acids

61.32

Weight (kDa)

5.33

Isoelectric Point (pI)

49.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 166 - 457 7.8e-111 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 364
Acc36I ACCTGC 2 cut(s) 737, 1537
Acc65I GGTACC 1 cut(s) 1485
AccB1I GGYRCC 1 cut(s) 1485
AccBSI CCGCTC 1 cut(s) 98
AciI CCGC 6 cut(s) 98, 244, 396, 620, 667, 1259
AclWI GGATC 3 cut(s) 406, 1304, 1317
AcoI YGGCCR 2 cut(s) 388, 621
AcuI CTGAAG 3 cut(s) 47, 858, 1392
AfaI GTAC 2 cut(s) 1487, 1496
AfiI CCNNNNNNNGG 3 cut(s) 165, 1324, 1589
AflII CTTAAG 1 cut(s) 1253
AgsI TTSAA 7 cut(s) 115, 131, 206, 293, 413, 1058, 1162
AjiI CACGTC 1 cut(s) 992
AjnI CCWGG 4 cut(s) 1045, 1098, 1195, 1554
AjuI GAANNNNNNNTTGG 2 cut(s) 839, 871
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 1 cut(s) 1390
AlwI GGATC 3 cut(s) 406, 1304, 1317
Ama87I CYCGRG 2 cut(s) 333, 1428
AoxI GGCC 5 cut(s) 388, 541, 621, 1344, 1423
ApeKI GCWGC 6 cut(s) 251, 308, 581, 617, 916, 1376
ArsI GACNNNNNNTTYG 2 cut(s) 1496, 1528
Asp700I GAANNNNTTC 3 cut(s) 288, 1177, 1457
Asp718I GGTACC 1 cut(s) 1485
AspLEI GCGC 1 cut(s) 226
AspS9I GGNCC 3 cut(s) 677, 1424, 1526
AsuC2I CCSGG 3 cut(s) 1429, 1430, 1524
AsuHPI GGTGA 5 cut(s) 83, 393, 1176, 1240, 1273
AsuII TTCGAA 1 cut(s) 1113
AsuNHI GCTAGC 1 cut(s) 878
AvaI CYCGRG 2 cut(s) 333, 1428
AvaII GGWCC 2 cut(s) 677, 1526
BamHI GGATCC 1 cut(s) 1309
BanI GGYRCC 1 cut(s) 1485
BauI CACGAG 1 cut(s) 1401
BbsI GAAGAC 4 cut(s) 360, 663, 1084, 1460
Bbv12I GWGCWC 1 cut(s) 138
BbvI GCAGC 6 cut(s) 263, 295, 568, 604, 928, 1363
BccI CCATC 5 cut(s) 329, 427, 523, 736, 1555
BceAI ACGGC 2 cut(s) 403, 1002
BciT130I CCWGG 4 cut(s) 1047, 1100, 1197, 1556
BciVI GTATCC 2 cut(s) 728, 1311
BclI TGATCA 1 cut(s) 1263
BcnI CCSGG 3 cut(s) 1429, 1430, 1524
BcoDI GTCTC 1 cut(s) 1390
BfaI CTAG 5 cut(s) 210, 236, 879, 923, 1467
BfrI CTTAAG 1 cut(s) 1253
BfuAI ACCTGC 2 cut(s) 737, 1537
BfuI GTATCC 2 cut(s) 728, 1311
BisI GCNGC 8 cut(s) 245, 252, 309, 582, 618, 621, 917, 1377
BlsI GCNGC 8 cut(s) 246, 253, 310, 583, 619, 622, 918, 1378
Bme1390I CCNGG 7 cut(s) 1047, 1100, 1197, 1429, 1430, 1524, 1556
Bme18I GGWCC 2 cut(s) 677, 1526
BmeT110I CYCGRG 2 cut(s) 333, 1428
BmgBI CACGTC 1 cut(s) 992
BmgT120I GGNCC 3 cut(s) 677, 1424, 1526
BmiI GGNNCC 4 cut(s) 679, 1311, 1426, 1487
BmrFI CCNGG 7 cut(s) 1047, 1100, 1197, 1429, 1430, 1524, 1556
BmrI ACTGGG 1 cut(s) 499
BmsI GCATC 5 cut(s) 295, 850, 865, 1078, 1214
BmtI GCTAGC 1 cut(s) 882
BmuI ACTGGG 1 cut(s) 499
BpiI GAAGAC 4 cut(s) 360, 663, 1084, 1460
BplI GAGNNNNNCTC 4 cut(s) 767, 799, 1115, 1147
BpmI CTGGAG 1 cut(s) 917
Bpu14I TTCGAA 1 cut(s) 1113
BpuEI CTTGAG 3 cut(s) 104, 170, 1310
BpuMI CCSGG 3 cut(s) 1429, 1430, 1524
BsaI GGTCTC 1 cut(s) 1390
BsaJI CCNNGG 9 cut(s) 142, 264, 391, 1196, 1347, 1427, 1428, 1522, 1555
BsaWI WCCGGW 1 cut(s) 944
Bsc4I CCNNNNNNNGG 3 cut(s) 165, 1324, 1589
Bse1I ACTGG 7 cut(s) 285, 505, 900, 1187, 1304, 1612, 1615
Bse3DI GCAATG 1 cut(s) 889
BseBI CCWGG 4 cut(s) 1047, 1100, 1197, 1556
BseDI CCNNGG 9 cut(s) 142, 264, 391, 1196, 1347, 1427, 1428, 1522, 1555
BseGI GGATG 4 cut(s) 498, 694, 865, 880
BseLI CCNNNNNNNGG 3 cut(s) 165, 1324, 1589
BseMI GCAATG 1 cut(s) 889
BseMII CTCAG 4 cut(s) 30, 351, 549, 743
BseNI ACTGG 7 cut(s) 285, 505, 900, 1187, 1304, 1612, 1615
BseRI GAGGAG 5 cut(s) 377, 608, 821, 1292, 1307
BseXI GCAGC 6 cut(s) 263, 295, 568, 604, 928, 1363
BsgI GTGCAG 1 cut(s) 1200
BshFI GGCC 5 cut(s) 390, 543, 623, 1346, 1425
BshNI GGYRCC 1 cut(s) 1485
BsiHKAI GWGCWC 1 cut(s) 138
BsiHKCI CYCGRG 2 cut(s) 333, 1428
BsiSI CCGG 3 cut(s) 945, 1429, 1524
BslI CCNNNNNNNGG 3 cut(s) 165, 1324, 1589
BsmAI GTCTC 1 cut(s) 1390
BsmI GAATGC 4 cut(s) 237, 1047, 1109, 1207
BsnI GGCC 5 cut(s) 390, 543, 623, 1346, 1425
Bso31I GGTCTC 1 cut(s) 1390
BsoBI CYCGRG 2 cut(s) 333, 1428
Bsp119I TTCGAA 1 cut(s) 1113
Bsp1286I GDGCHC 1 cut(s) 138
Bsp143I GATC 3 cut(s) 398, 1263, 1309
Bsp19I CCATGG 1 cut(s) 142
BspACI CCGC 6 cut(s) 98, 244, 396, 620, 667, 1259
BspANI GGCC 5 cut(s) 390, 543, 623, 1346, 1425
BspCNI CTCAG 4 cut(s) 29, 352, 548, 744
BspHI TCATGA 1 cut(s) 175
BspLI GGNNCC 4 cut(s) 679, 1311, 1426, 1487
BspMI ACCTGC 2 cut(s) 737, 1537
BspOI GCTAGC 1 cut(s) 882
BspPI GGATC 3 cut(s) 406, 1304, 1317
BspQI GCTCTTC 1 cut(s) 126
BspT104I TTCGAA 1 cut(s) 1113
BspT107I GGYRCC 1 cut(s) 1485
BspTI CTTAAG 1 cut(s) 1253
BspTNI GGTCTC 1 cut(s) 1390
BsrBI CCGCTC 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 889
BsrI ACTGG 7 cut(s) 285, 505, 900, 1187, 1304, 1612, 1615
BssECI CCNNGG 9 cut(s) 142, 264, 391, 1196, 1347, 1427, 1428, 1522, 1555
BssMI GATC 3 cut(s) 398, 1263, 1309
BssSI CACGAG 1 cut(s) 1401
BssT1I CCWWGG 4 cut(s) 142, 264, 391, 1347
Bst2BI CACGAG 1 cut(s) 1401
Bst2UI CCWGG 4 cut(s) 1047, 1100, 1197, 1556
Bst4CI ACNGT 5 cut(s) 217, 409, 1073, 1494, 1512
Bst6I CTCTTC 5 cut(s) 126, 293, 294, 408, 1355
BstAFI CTTAAG 1 cut(s) 1253
BstAPI GCANNNNNTGC 1 cut(s) 232
BstBI TTCGAA 1 cut(s) 1113
BstC8I GCNNGC 3 cut(s) 249, 880, 1626
BstDEI CTNAG 4 cut(s) 16, 360, 535, 752
BstDSI CCRYGG 1 cut(s) 142
BstEII GGTNACC 2 cut(s) 89, 100
BstENI CCTNNNNNAGG 1 cut(s) 163
BstF5I GGATG 4 cut(s) 498, 694, 865, 880
BstHHI GCGC 1 cut(s) 226
BstKTI GATC 3 cut(s) 401, 1266, 1312
BstMAI GTCTC 1 cut(s) 1390
BstMBI GATC 3 cut(s) 398, 1263, 1309
BstMWI GCNNNNNNNGC 9 cut(s) 232, 241, 260, 317, 614, 629, 1175, 1256, 1294
BstNI CCWGG 4 cut(s) 1047, 1100, 1197, 1556
BstNSI RCATGY 1 cut(s) 1579
BstPI GGTNACC 2 cut(s) 89, 100
BstSCI CCNGG 7 cut(s) 1045, 1098, 1195, 1427, 1428, 1522, 1554
BstV1I GCAGC 6 cut(s) 263, 295, 568, 604, 928, 1363
BstV2I GAAGAC 4 cut(s) 360, 663, 1084, 1460
BstX2I RGATCY 1 cut(s) 1309
BstXI CCANNNNNNTGG 1 cut(s) 712
BstYI RGATCY 1 cut(s) 1309
BsuI GTATCC 2 cut(s) 728, 1311
BsuRI GGCC 5 cut(s) 390, 543, 623, 1346, 1425
BtgI CCRYGG 1 cut(s) 142
BtrI CACGTC 1 cut(s) 992
BtsCI GGATG 4 cut(s) 498, 694, 865, 880
BtsI GCAGTG 1 cut(s) 1540
BtsIMutI CAGTG 6 cut(s) 222, 378, 893, 1078, 1311, 1540
BveI ACCTGC 2 cut(s) 737, 1537
Cac8I GCNNGC 3 cut(s) 249, 880, 1626
CciI TCATGA 1 cut(s) 175
CfoI GCGC 1 cut(s) 226
Cfr13I GGNCC 3 cut(s) 677, 1424, 1526
Cfr9I CCCGGG 1 cut(s) 1428
Csp6I GTAC 2 cut(s) 1486, 1495
CviAII CATG 7 cut(s) 143, 176, 670, 871, 905, 1576, 1589
CviQI GTAC 2 cut(s) 1486, 1495
DdeI CTNAG 4 cut(s) 16, 360, 535, 752
DpnI GATC 3 cut(s) 400, 1265, 1311
DpnII GATC 3 cut(s) 398, 1263, 1309
DrdI GACNNNNNNGTC 1 cut(s) 364
DseDI GACNNNNNNGTC 1 cut(s) 364
EaeI YGGCCR 2 cut(s) 388, 621
Eam1104I CTCTTC 5 cut(s) 126, 293, 294, 408, 1355
EarI CTCTTC 5 cut(s) 126, 293, 294, 408, 1355
EciI GGCGGA 1 cut(s) 411
Eco130I CCWWGG 4 cut(s) 142, 264, 391, 1347
Eco147I AGGCCT 1 cut(s) 543
Eco31I GGTCTC 1 cut(s) 1390
Eco47I GGWCC 2 cut(s) 677, 1526
Eco57I CTGAAG 3 cut(s) 47, 858, 1392
Eco88I CYCGRG 2 cut(s) 333, 1428
Eco91I GGTNACC 2 cut(s) 89, 100
EcoNI CCTNNNNNAGG 1 cut(s) 163
EcoO109I RGGNCCY 1 cut(s) 677
EcoO65I GGTNACC 2 cut(s) 89, 100
EcoRII CCWGG 4 cut(s) 1045, 1098, 1195, 1554
EcoT14I CCWWGG 4 cut(s) 142, 264, 391, 1347
EcoT22I ATGCAT 1 cut(s) 1207
ErhI CCWWGG 4 cut(s) 142, 264, 391, 1347
FaeI CATG 7 cut(s) 146, 179, 673, 874, 908, 1579, 1592
FalI AAGNNNNNCTT 4 cut(s) 1142, 1174, 1162, 1194
FatI CATG 7 cut(s) 142, 175, 669, 870, 904, 1575, 1588
FbaI TGATCA 1 cut(s) 1263
Fnu4HI GCNGC 8 cut(s) 245, 252, 309, 582, 618, 621, 917, 1377
FokI GGATG 4 cut(s) 505, 701, 872, 887
Fsp4HI GCNGC 8 cut(s) 245, 252, 309, 582, 618, 621, 917, 1377
FspBI CTAG 5 cut(s) 210, 236, 879, 923, 1467
GlaI GCGC 1 cut(s) 225
GluI GCNGC 8 cut(s) 245, 252, 309, 582, 618, 621, 917, 1377
GsuI CTGGAG 1 cut(s) 917
HaeIII GGCC 5 cut(s) 390, 543, 623, 1346, 1425
HapII CCGG 3 cut(s) 945, 1429, 1524
HhaI GCGC 1 cut(s) 226
Hin1II CATG 7 cut(s) 146, 179, 673, 874, 908, 1579, 1592
Hin6I GCGC 1 cut(s) 224
HinP1I GCGC 1 cut(s) 224
HincII GTYRAC 2 cut(s) 765, 1096
HindII GTYRAC 2 cut(s) 765, 1096
HindIII AAGCTT 2 cut(s) 1176, 1286
HinfI GANTC 7 cut(s) 35, 365, 533, 598, 647, 701, 1470
HpaI GTTAAC 2 cut(s) 765, 1096
HpaII CCGG 3 cut(s) 945, 1429, 1524
HphI GGTGA 5 cut(s) 83, 393, 1176, 1240, 1273
Hpy166II GTNNAC 7 cut(s) 514, 524, 765, 1022, 1069, 1096, 1519
Hpy188I TCNGA 7 cut(s) 66, 442, 538, 562, 753, 793, 1418
Hpy188III TCNNGA 5 cut(s) 176, 293, 335, 653, 866
Hpy8I GTNNAC 7 cut(s) 514, 524, 765, 1022, 1069, 1096, 1519
Hpy99I CGWCG 3 cut(s) 726, 996, 999
HpyAV CCTTC 7 cut(s) 61, 179, 343, 533, 668, 691, 1156
HpyCH4III ACNGT 5 cut(s) 217, 409, 1073, 1494, 1512
HpyCH4IV ACGT 2 cut(s) 991, 1497
HpyF10VI GCNNNNNNNGC 9 cut(s) 232, 241, 260, 317, 614, 629, 1175, 1256, 1294
HpyF3I CTNAG 4 cut(s) 16, 360, 535, 752
HpySE526I ACGT 2 cut(s) 991, 1497
Hsp92II CATG 7 cut(s) 146, 179, 673, 874, 908, 1579, 1592
HspAI GCGC 1 cut(s) 224
KpnI GGTACC 1 cut(s) 1489
Ksp22I TGATCA 1 cut(s) 1263
KspAI GTTAAC 2 cut(s) 765, 1096
Kzo9I GATC 3 cut(s) 398, 1263, 1309
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 3 cut(s) 480, 1279, 1294
Lsp1109I GCAGC 6 cut(s) 263, 295, 568, 604, 928, 1363
LweI GCATC 5 cut(s) 295, 850, 865, 1078, 1214
MaeI CTAG 5 cut(s) 210, 236, 879, 923, 1467
MaeII ACGT 2 cut(s) 991, 1497
MaeIII GTNAC 7 cut(s) 89, 100, 376, 446, 460, 1366, 1432
MalI GATC 3 cut(s) 400, 1265, 1311
MbiI CCGCTC 1 cut(s) 98
MboI GATC 3 cut(s) 398, 1263, 1309
MflI RGATCY 1 cut(s) 1309
MhlI GDGCHC 1 cut(s) 138
MluCI AATT 3 cut(s) 962, 975, 1083
MlyI GAGTC 3 cut(s) 374, 527, 1479
MmeI TCCRAC 3 cut(s) 729, 837, 1396
Mph1103I ATGCAT 1 cut(s) 1207
MroXI GAANNNNTTC 3 cut(s) 288, 1177, 1457
MseI TTAA 5 cut(s) 161, 764, 813, 1095, 1254
MslI CAYNNNNRTG 1 cut(s) 141
MspA1I CMGCKG 3 cut(s) 254, 1007, 1336
MspCI CTTAAG 1 cut(s) 1253
MspI CCGG 3 cut(s) 945, 1429, 1524
MspR9I CCNGG 7 cut(s) 1047, 1100, 1197, 1429, 1430, 1524, 1556
Mva1269I GAATGC 4 cut(s) 237, 1047, 1109, 1207
MvaI CCWGG 4 cut(s) 1047, 1100, 1197, 1556
MwoI GCNNNNNNNGC 9 cut(s) 232, 241, 260, 317, 614, 629, 1175, 1256, 1294
NciI CCSGG 3 cut(s) 1429, 1430, 1524
NcoI CCATGG 1 cut(s) 142
NdeII GATC 3 cut(s) 398, 1263, 1309
NheI GCTAGC 1 cut(s) 878
NlaIII CATG 7 cut(s) 146, 179, 673, 874, 908, 1579, 1592
NlaIV GGNNCC 4 cut(s) 679, 1311, 1426, 1487
NmuCI GTSAC 4 cut(s) 89, 376, 460, 1432
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 1 cut(s) 1579
NspV TTCGAA 1 cut(s) 1113
PaeR7I CTCGAG 1 cut(s) 333
PagI TCATGA 1 cut(s) 175
PceI AGGCCT 1 cut(s) 543
PciSI GCTCTTC 1 cut(s) 126
PctI GAATGC 4 cut(s) 237, 1047, 1109, 1207
PdmI GAANNNNTTC 3 cut(s) 288, 1177, 1457
PfeI GAWTC 4 cut(s) 35, 598, 647, 701
PkrI GCNGC 8 cut(s) 246, 253, 310, 583, 619, 622, 918, 1378
PleI GAGTC 3 cut(s) 373, 527, 1478
PpsI GAGTC 3 cut(s) 373, 527, 1478
PpuMI RGGWCCY 1 cut(s) 677
Psp5II RGGWCCY 1 cut(s) 677
Psp6I CCWGG 4 cut(s) 1045, 1098, 1195, 1554
PspEI GGTNACC 2 cut(s) 89, 100
PspGI CCWGG 4 cut(s) 1045, 1098, 1195, 1554
PspN4I GGNNCC 4 cut(s) 679, 1311, 1426, 1487
PspPI GGNCC 3 cut(s) 677, 1424, 1526
PspPPI RGGWCCY 1 cut(s) 677
PsuI RGATCY 1 cut(s) 1309
PvuII CAGCTG 3 cut(s) 254, 1007, 1336
RsaI GTAC 2 cut(s) 1487, 1496
RsaNI GTAC 2 cut(s) 1486, 1495
RseI CAYNNNNRTG 1 cut(s) 141
SapI GCTCTTC 1 cut(s) 126
SaqAI TTAA 5 cut(s) 161, 764, 813, 1095, 1254
SatI GCNGC 8 cut(s) 245, 252, 309, 582, 618, 621, 917, 1377
Sau3AI GATC 3 cut(s) 398, 1263, 1309
Sau96I GGNCC 3 cut(s) 677, 1424, 1526
SchI GAGTC 3 cut(s) 374, 527, 1479
ScrFI CCNGG 7 cut(s) 1047, 1100, 1197, 1429, 1430, 1524, 1556
SduI GDGCHC 1 cut(s) 138
SfaNI GCATC 5 cut(s) 295, 850, 865, 1078, 1214
Sfr274I CTCGAG 1 cut(s) 333
SfuI TTCGAA 1 cut(s) 1113
SinI GGWCC 2 cut(s) 677, 1526
SlaI CTCGAG 1 cut(s) 333
SmaI CCCGGG 1 cut(s) 1430
SmiMI CAYNNNNRTG 1 cut(s) 141
SmlI CTYRAG 5 cut(s) 83, 149, 333, 1253, 1289
SmoI CTYRAG 5 cut(s) 83, 149, 333, 1253, 1289
Sse9I AATT 3 cut(s) 962, 975, 1083
SseBI AGGCCT 1 cut(s) 543
SsiI CCGC 6 cut(s) 98, 244, 396, 620, 667, 1259
SspMI CTAG 5 cut(s) 210, 236, 879, 923, 1467
StuI AGGCCT 1 cut(s) 543
StyD4I CCNGG 7 cut(s) 1045, 1098, 1195, 1427, 1428, 1522, 1554
StyI CCWWGG 4 cut(s) 142, 264, 391, 1347
TaaI ACNGT 5 cut(s) 217, 409, 1073, 1494, 1512
TaiI ACGT 2 cut(s) 994, 1500
TaqI TCGA 4 cut(s) 334, 356, 724, 1113
TaqII GACCGA 1 cut(s) 1049
TasI AATT 3 cut(s) 962, 975, 1083
TauI GCSGC 2 cut(s) 247, 623
TfiI GAWTC 4 cut(s) 35, 598, 647, 701
Tru1I TTAA 5 cut(s) 161, 764, 813, 1095, 1254
Tru9I TTAA 5 cut(s) 161, 764, 813, 1095, 1254
TscAI CASTG 6 cut(s) 222, 385, 900, 1078, 1311, 1547
TseFI GTSAC 4 cut(s) 89, 376, 460, 1432
TseI GCWGC 6 cut(s) 251, 308, 581, 617, 916, 1376
Tsp45I GTSAC 4 cut(s) 89, 376, 460, 1432
TspDTI ATGAA 2 cut(s) 164, 969
TspGWI ACGGA 1 cut(s) 710
TspMI CCCGGG 1 cut(s) 1428
TspRI CASTG 6 cut(s) 222, 385, 900, 1078, 1311, 1547
Vha464I CTTAAG 1 cut(s) 1253
VpaK11BI GGWCC 2 cut(s) 677, 1526
XagI CCTNNNNNAGG 1 cut(s) 163
XceI RCATGY 1 cut(s) 1579
XhoI CTCGAG 1 cut(s) 333
XmaI CCCGGG 1 cut(s) 1428
XmnI GAANNNNTTC 3 cut(s) 288, 1177, 1457
XspI CTAG 5 cut(s) 210, 236, 879, 923, 1467
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.