Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0005444

Physical Location & Seq

Genomic Coordinates Reverse (-)

19899168 .. 19905503

Gene Structure 6336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

ATGCTTGAGCCAAGGGAAGCTGATATACCTGCTCTGTTTCTGGTTTTCATTGTACTCCCTTTAGTTGCTTACGTTTTACTTGGAAAATGGAGTGAGACATCTAAGAAGAGAGAGACGGTAAGTTTGCTTGCTCAACTGGCTGCAGAAGAAGCTCTTAGAGCAGAAACAATGGCCATTGCTGCTGTTATTCCTCCTGTGTCTTCTTCAAATCCTTCGAAGAATGGACTTCAAATATGTGCCAGATGCTATAGTACAGCTACAACCCGCTGCTCTAGATGCAAATCCATCAGATATTGTTCTGGTAAGTGTCAAATAATTCACTGGAGGGAAGTTCACAGGCAAGAATGCCTGCAGTTGGAACCTACTAGTTCAAGCTCATCTCCTATGGCTGTCTCATTTGGAGAATCTTTTCATGAGAAGTTCTTACCTAATGACAGCATCAATTCACAGTACTTTGGGTCTAAGATGGAGCAGAATTTGGCTGAGCAAGCACCACCAGATAATATAATTTATCCTTCAACAAGCACTGGTGCCCCTGTTATGCTTGATTGTGCTTCTTCAGTTGATACCTCTCAAGTTTCCATGCCAGAGAGAAGAAGTGTGGACAAGCGGGTTTCCAGAAAATCCCACAGACAATTAAGAAAAAAAGTTGAAGTTGCATTAGATTCTTCTGAAGAAACATCTTTTGGTTGGACTACCCATTTGGGCTCTTCTAATGTTAATTCATCAAAAGAGGTTTTTATGGAGCATAAGTTAAGAAATTGTGACTCTCACTTAGGAGAGGAAGAAAATGCTATGATGCAAAATGTCAATGTTTCTGACAGTTATATGAAAGGACAAGCTACTTCAAGAAATACAGTGCATGAGATTGATAAGTCTCAAAGTCAAAGTGGCTACATATATGAATCAGGAAGCAACTCTGGATTAACATCCTCGTCATATTCTTCAAAAAGTGGAATAGATGTGCATGAAAATGGGTTGGACTTCATTCCGAATGGAGGAAATTACCTTAAAGGGGAAAGATTATCCAATTATGAAACAGCAGAGTTCAAATGTGCTGAAATGACGAAAATGAAGACTGACGTAAAGGCTAAAAGAGCTCCGTATTCTCTTGGGACCAAGGTGTCTAAATTACCAAAATCAACAATGGAAGTCTCCGGAGAGCAGTGTTACTCAGAGATAGAGGGGCAGGGACAAATTGCTGAAGTTTCAAAATTCACTAGAATGAGAGATACCACTGCACAAGGGAGCAATGGAATTGCAAATGTAAGGATCATGAAGATGATGGGTCTAAAGAAGCCAAAGAACTTTACCAGACAGGAAGTCCCCGAATTGAATGGTTACCAACAGAAAACTAAGGTCCTGTTCCCTTATGATGAGTTTGTGAAGTACCTTCAGTGTGAAGTCTTTGACTTATCACCTCGAGGCCTTTTGAATTGTGGGAACAGCTGCTATGCAAATGCCGTCTTGCAGTGCTTAACCTGCACAAAGCCTCTCATTATCTATTTGATAAGATCACATTCAAGAGCCTGTTGTGGTAAAGATTGGTGTCTCATGTGTGAGCTGGAGCAACATGTAATGATGCTACGAGAAAGTGGGGGCCCACTTTCTCCTAGTCGAATTCTTTTTCATATGAGGAGTATTAATTGCCAAATTGGTGATGGAAGTCAAGAAGATGCACATGAATTCTTAAGGCTTCTAGTTACGTCAATGCAATCTATATGCTTGGAGGGGCTGGGTTGTGAAAACAAGGTTGATCCTAGATTGCAAGAAACAACTTTTATACAACATACATTTGGCGGGCATCTCAGATCAAAGGTCGAGTGTTTGAGATGTCATCATGAGTCAGAACGATATGAAAACATCATGGATCTTACCTTAGAGATATTTGGTTGGGTTGAGTCACTTGAAGATGCTCTGACTCAGTTTACAACCTCTGAAGATTTGGATGGAGAAAACATGTACAGATGTGGAAGGAAGCAATTGAGCATACATGAGGCGCCAAATATCCTCACAATTGTCTTGAAGAGATTTCAGGAGGGAAATTATGGAAAAATAAACAAGTGCATCACTTTTCCAGACATGTTGGATATGATTCCATTTATGACTGGAACGGGTGACATTCCTCCGCTTTACTTGCTATATGGTGTTGTGGTGCATTTGGATACGCAGAATGCATCTTTCTCTGGACATTATGTGGCATATGTGAAAGACATGCGAGGCGATTGGTTCAGGATAGATGACACTGAGGTTCACCCCGTCTCAATGAGCCAGGTTATGATGGAAGGAGCATATATCTTATTTTACATGAGGTCTTGTCCCCGCCCTCAAAGAGTATTTTCTGGAAAAGCTGTCAGGGAGCAAGTTCCAGGCTTAGAAAATCAATGCATGTTGAAAGCTCAGAAGTCAAGGCTAGATCAAAGCAAACACAGCAGCCAATTTGCTAGGCGAGAGCATTTACCAGGTGATATCTGGCCAGATATTGCAGATGCCTTTGGCAACAGCACCACTAATGATATCCATCGGAGTTCTAATGGGAATGTTTTCCCTATGGTGGAAACATATGGTGAGCCCATCGGTGTGGAGTTCTCTGATGCTACGTCAAGTGATTGGTCCCTTTTTACAAGTTCTGACGAGGCCTCGTTCACGACTGAGAGTACTAGAGACTCTTTCAGTACTGTGGATTGTGCCGATGCTTGGAATATCGATCCAATCTCTTCAATTTTCAACACGTTATATGCTCCAGAGTATTCTCACAGTTCTGCATCCTGTAGAAAATTTTCTAACAGTAGGCCACACACTAGATTTGTTTCCAAGGAAAGGGGCGTTATTTTGGATTCGTGCTTGTCAACCCATCCCGTTGACAGAGTACAGAAACGAAACTATTCAAGACAGGTCAGTGATTCACAAACCGAACACCCTCTGGATAGTAAATGCAGCTCGTTTGTAAGATATGGGACTAACCCAATACATAGTCTTGACCGAACTTCAGATCATTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

1001

Amino Acids

112.35

Weight (kDa)

6.18

Isoelectric Point (pI)

48.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	79 - 116	8.9e-09	MYND finger
UCH	PF00443	475 - 769	1.9e-50	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	476 - 751	4.3e-16	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005444)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17110 AT1G17110 AT1G17110
fragaria_vesca	FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820 FvH4_3g16820
malus_domestica	MD05G1206800.v1.1 MD10G1193900.v1.1
prunus_persica	Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1 Prupe.4G150400_v2.0.a1
pyrus_communis	pycom05g19290 pycom10g16770
rosa_chinensis	RchiOBHm_Chr5g0028031
rosa_laevigata	RLG00000033059
rosa_multiflora	Rmu_sc0009432.1_g000009
rosa_roxburghii	Rroxscaffold_1G00051630
rosa_rugosa	Rorug05G0103600
rosa_samantha	Rh5AG197200 Rh5BG195400 Rh5CG215600 Rh5DG197000
rosa_wichuraiana	Rw5G017980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3001
AasI	GACNNNNNNGTC	1 cut(s)	1123
AbsI	CCTCGAGG	1 cut(s)	1422
Acc36I	ACCTGC	2 cut(s)	37, 1490
AccB1I	GGYRCC	2 cut(s)	530, 1999
AccIII	TCCGGA	1 cut(s)	1157
AciI	CCGC	5 cut(s)	265, 610, 1800, 2129, 2323
AclWI	GGATC	4 cut(s)	1280, 1751, 1878, 2702
AcoI	YGGCCR	2 cut(s)	171, 2474
AcsI	RAATTY	5 cut(s)	475, 1214, 1620, 1685, 2777
AcuI	CTGAAG	6 cut(s)	543, 693, 1224, 1379, 1959, 2973
AcyI	GRCGYC	1 cut(s)	2000
AfaI	GTAC	8 cut(s)	54, 253, 452, 1391, 1964, 2659, 2677, 2871
AfiI	CCNNNNNNNGG	6 cut(s)	355, 998, 1015, 2554, 2697, 2820
AflII	CTTAAG	1 cut(s)	1690
AflIII	ACRYGT	4 cut(s)	1573, 1959, 2082, 2730
AhdI	GACNNNNNGTC	1 cut(s)	1322
AhlI	ACTAGT	1 cut(s)	365
AjnI	CCWGG	3 cut(s)	2271, 2368, 2461
AjuI	GAANNNNNNNTTGG	2 cut(s)	669, 701
Alw21I	GWGCWC	1 cut(s)	1102
Alw26I	GTCTC	8 cut(s)	89, 107, 397, 882, 1159, 1556, 2266, 2658
AlwI	GGATC	4 cut(s)	1280, 1751, 1878, 2702
Ama87I	CYCGRG	1 cut(s)	1422
Aor13HI	TCCGGA	1 cut(s)	1157
AoxI	GGCC	6 cut(s)	171, 1426, 1600, 2474, 2637, 2792
ApaI	GGGCCC	1 cut(s)	1604
ApeKI	GCWGC	6 cut(s)	140, 179, 267, 1449, 2433, 2937
ApoI	RAATTY	5 cut(s)	475, 1214, 1620, 1685, 2777
ArsI	GACNNNNNNTTYG	4 cut(s)	106, 138, 685, 717
AseI	ATTAAT	1 cut(s)	1644
Asp700I	GAANNNNTTC	4 cut(s)	408, 2543, 2779, 2884
AspLEI	GCGC	1 cut(s)	2002
AspS9I	GGNCC	5 cut(s)	1116, 1360, 1600, 1601, 2613
AsuHPI	GGTGA	6 cut(s)	1410, 1670, 2129, 2246, 2477, 2579
AsuII	TTCGAA	1 cut(s)	215
AvaI	CYCGRG	1 cut(s)	1422
AvaII	GGWCC	3 cut(s)	1116, 1360, 2613
BaeGI	GKGCMC	2 cut(s)	535, 1604
BalI	TGGCCA	2 cut(s)	173, 2476
BanI	GGYRCC	2 cut(s)	530, 1999
BanII	GRGCYC	4 cut(s)	710, 1102, 1604, 2574
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BbsI	GAAGAC	2 cut(s)	192, 1082
Bbv12I	GWGCWC	1 cut(s)	1102
BbvI	GCAGC	6 cut(s)	127, 166, 254, 1436, 2445, 2949
BccI	CCATC	9 cut(s)	293, 460, 1279, 1655, 1943, 2275, 2529, 2582, 2862
BceAI	ACGGC	1 cut(s)	1448
BciT130I	CCWGG	3 cut(s)	2273, 2370, 2463
BciVI	GTATCC	1 cut(s)	2158
BcoDI	GTCTC	8 cut(s)	89, 107, 397, 882, 1159, 1556, 2266, 2658
BcuI	ACTAGT	1 cut(s)	365
BfmI	CTRYAG	4 cut(s)	141, 247, 350, 2770
BfoI	RGCGCY	1 cut(s)	2003
BfrI	CTTAAG	1 cut(s)	1690
BfuAI	ACCTGC	2 cut(s)	37, 1490
BfuI	GTATCC	1 cut(s)	2158
BisI	GCNGC	6 cut(s)	141, 180, 268, 1450, 2434, 2938
BlpI	GCTNAGC	1 cut(s)	483
BlsI	GCNGC	6 cut(s)	142, 181, 269, 1451, 2435, 2939
BmcAI	AGTACT	3 cut(s)	452, 2659, 2677
Bme1390I	CCNGG	3 cut(s)	2273, 2370, 2463
Bme18I	GGWCC	3 cut(s)	1116, 1360, 2613
BmeRI	GACNNNNNGTC	1 cut(s)	1322
BmeT110I	CYCGRG	1 cut(s)	1422
BmgT120I	GGNCC	5 cut(s)	1116, 1360, 1600, 1601, 2613
BmiI	GGNNCC	7 cut(s)	360, 532, 1117, 1601, 1602, 2001, 2615
BmrFI	CCNGG	3 cut(s)	2273, 2370, 2463
BpiI	GAAGAC	2 cut(s)	192, 1082
BpmI	CTGGAG	3 cut(s)	343, 1586, 2727
Bpu1102I	GCTNAGC	1 cut(s)	483
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	2 cut(s)	26, 558
Bsa29I	ATCGAT	1 cut(s)	2706
BsaBI	GATNNNNATC	3 cut(s)	280, 928, 2520
BsaHI	GRCGYC	1 cut(s)	2000
BsaJI	CCNNGG	3 cut(s)	11, 1119, 2814
BsaWI	WCCGGW	1 cut(s)	1157
BsaXI	ACNNNNNCTCC	2 cut(s)	737, 767
Bsc4I	CCNNNNNNNGG	6 cut(s)	355, 998, 1015, 2554, 2697, 2820
Bse1I	ACTGG	4 cut(s)	141, 326, 532, 2113
Bse3DI	GCAATG	2 cut(s)	174, 1258
Bse8I	GATNNNNATC	3 cut(s)	280, 928, 2520
BseAI	TCCGGA	1 cut(s)	1157
BseBI	CCWGG	3 cut(s)	2273, 2370, 2463
BseCI	ATCGAT	1 cut(s)	2706
BseDI	CCNNGG	3 cut(s)	11, 1119, 2814
BseGI	GGATG	4 cut(s)	929, 1954, 2765, 2854
BseJI	GATNNNNATC	3 cut(s)	280, 928, 2520
BseLI	CCNNNNNNNGG	6 cut(s)	355, 998, 1015, 2554, 2697, 2820
BseMI	GCAATG	2 cut(s)	174, 1258
BseMII	CTCAG	7 cut(s)	474, 1188, 1822, 1937, 2238, 2414, 2643
BseNI	ACTGG	4 cut(s)	141, 326, 532, 2113
BseRI	GAGGAG	1 cut(s)	1651
BseSI	GKGCMC	2 cut(s)	535, 1604
BseXI	GCAGC	6 cut(s)	127, 166, 254, 1436, 2445, 2949
BseYI	CCCAGC	1 cut(s)	1735
BsgI	GTGCAG	2 cut(s)	1224, 1468
BshFI	GGCC	6 cut(s)	173, 1428, 1602, 2476, 2639, 2794
BshNI	GGYRCC	2 cut(s)	530, 1999
BshVI	ATCGAT	1 cut(s)	2706
BsiHKAI	GWGCWC	1 cut(s)	1102
BsiHKCI	CYCGRG	1 cut(s)	1422
BsiSI	CCGG	1 cut(s)	1158
BslFI	GGGAC	6 cut(s)	1129, 1206, 1310, 2304, 2599, 2971
BslI	CCNNNNNNNGG	6 cut(s)	355, 998, 1015, 2554, 2697, 2820
BsmAI	GTCTC	8 cut(s)	89, 107, 397, 882, 1159, 1556, 2266, 2658
BsmBI	CGTCTC	2 cut(s)	107, 2266
BsmFI	GGGAC	6 cut(s)	1129, 1206, 1310, 2304, 2599, 2971
BsmI	GAATGC	2 cut(s)	350, 2179
BsnI	GGCC	6 cut(s)	173, 1428, 1602, 2476, 2639, 2794
BsoBI	CYCGRG	1 cut(s)	1422
Bsp119I	TTCGAA	1 cut(s)	215
Bsp120I	GGGCCC	1 cut(s)	1600
Bsp1286I	GDGCHC	5 cut(s)	535, 710, 1102, 1604, 2574
Bsp13I	TCCGGA	1 cut(s)	1157
Bsp1407I	TGTACA	1 cut(s)	1962
Bsp143I	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
Bsp1720I	GCTNAGC	1 cut(s)	483
BspACI	CCGC	5 cut(s)	265, 610, 1800, 2129, 2323
BspANI	GGCC	6 cut(s)	173, 1428, 1602, 2476, 2639, 2794
BspCNI	CTCAG	7 cut(s)	475, 1187, 1821, 1936, 2239, 2413, 2644
BspDI	ATCGAT	1 cut(s)	2706
BspEI	TCCGGA	1 cut(s)	1157
BspHI	TCATGA	3 cut(s)	412, 1275, 1840
BspLI	GGNNCC	7 cut(s)	360, 532, 1117, 1601, 1602, 2001, 2615
BspMAI	CTGCAG	2 cut(s)	145, 354
BspMI	ACCTGC	2 cut(s)	37, 1490
BspPI	GGATC	4 cut(s)	1280, 1751, 1878, 2702
BspQI	GCTCTTC	1 cut(s)	715
BspT104I	TTCGAA	1 cut(s)	215
BspT107I	GGYRCC	2 cut(s)	530, 1999
BspTI	CTTAAG	1 cut(s)	1690
BsrDI	GCAATG	2 cut(s)	174, 1258
BsrGI	TGTACA	1 cut(s)	1962
BsrI	ACTGG	4 cut(s)	141, 326, 532, 2113
BssECI	CCNNGG	3 cut(s)	11, 1119, 2814
BssMI	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
BssNI	GRCGYC	1 cut(s)	2000
BssT1I	CCWWGG	3 cut(s)	11, 1119, 2814
Bst2UI	CCWGG	3 cut(s)	2273, 2370, 2463
Bst4CI	ACNGT	7 cut(s)	118, 450, 824, 859, 2680, 2759, 2789
Bst6I	CTCTTC	4 cut(s)	101, 715, 2021, 2722
BstACI	GRCGYC	1 cut(s)	2000
BstAFI	CTTAAG	1 cut(s)	1690
BstAUI	TGTACA	1 cut(s)	1962
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	4 cut(s)	129, 350, 489, 1802
BstEII	GGTNACC	1 cut(s)	1340
BstF5I	GGATG	4 cut(s)	929, 1954, 2765, 2854
BstH2I	RGCGCY	1 cut(s)	2003
BstHHI	GCGC	1 cut(s)	2002
BstKTI	GATC	8 cut(s)	1275, 1517, 1759, 1814, 1873, 2419, 2710, 2995
BstMAI	GTCTC	8 cut(s)	89, 107, 397, 882, 1159, 1556, 2266, 2658
BstMBI	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
BstNI	CCWGG	3 cut(s)	2273, 2370, 2463
BstNSI	RCATGY	5 cut(s)	1577, 1963, 2086, 2218, 2392
BstPI	GGTNACC	1 cut(s)	1340
BstSCI	CCNGG	3 cut(s)	2271, 2368, 2461
BstSFI	CTRYAG	4 cut(s)	141, 247, 350, 2770
BstSLI	GKGCMC	2 cut(s)	535, 1604
BstV1I	GCAGC	6 cut(s)	127, 166, 254, 1436, 2445, 2949
BstV2I	GAAGAC	2 cut(s)	192, 1082
BstX2I	RGATCY	1 cut(s)	1870
BstXI	CCANNNNNNTGG	1 cut(s)	2581
BstYI	RGATCY	1 cut(s)	1870
Bsu15I	ATCGAT	1 cut(s)	2706
BsuI	GTATCC	1 cut(s)	2158
BsuRI	GGCC	6 cut(s)	173, 1428, 1602, 2476, 2639, 2794
BsuTUI	ATCGAT	1 cut(s)	2706
BtsCI	GGATG	4 cut(s)	929, 1954, 2765, 2854
BtsI	GCAGTG	3 cut(s)	1172, 1236, 1478
BtsIMutI	CAGTG	9 cut(s)	319, 525, 864, 1172, 1236, 1403, 1478, 2244, 2905
BveI	ACCTGC	2 cut(s)	37, 1490
Cac8I	GCNNGC	4 cut(s)	129, 350, 489, 1802
CciI	TCATGA	3 cut(s)	412, 1275, 1840
CfoI	GCGC	1 cut(s)	2002
Cfr13I	GGNCC	5 cut(s)	1116, 1360, 1600, 1601, 2613
ClaI	ATCGAT	1 cut(s)	2706
CsiI	ACCWGGT	1 cut(s)	2461
Csp6I	GTAC	8 cut(s)	53, 252, 451, 1390, 1963, 2658, 2676, 2870
CviQI	GTAC	8 cut(s)	53, 252, 451, 1390, 1963, 2658, 2676, 2870
DinI	GGCGCC	1 cut(s)	2001
DpnI	GATC	8 cut(s)	1274, 1516, 1758, 1813, 1872, 2418, 2709, 2994
DpnII	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
DrdI	GACNNNNNNGTC	1 cut(s)	1123
DriI	GACNNNNNGTC	1 cut(s)	1322
DseDI	GACNNNNNNGTC	1 cut(s)	1123
EaeI	YGGCCR	2 cut(s)	171, 2474
Eam1104I	CTCTTC	4 cut(s)	101, 715, 2021, 2722
Eam1105I	GACNNNNNGTC	1 cut(s)	1322
EarI	CTCTTC	4 cut(s)	101, 715, 2021, 2722
Ecl136II	GAGCTC	1 cut(s)	1100
Eco130I	CCWWGG	3 cut(s)	11, 1119, 2814
Eco147I	AGGCCT	2 cut(s)	1428, 2639
Eco24I	GRGCYC	4 cut(s)	710, 1102, 1604, 2574
Eco32I	GATATC	2 cut(s)	2470, 2518
Eco47I	GGWCC	3 cut(s)	1116, 1360, 2613
Eco53kI	GAGCTC	1 cut(s)	1100
Eco57I	CTGAAG	6 cut(s)	543, 693, 1224, 1379, 1959, 2973
Eco88I	CYCGRG	1 cut(s)	1422
Eco91I	GGTNACC	1 cut(s)	1340
EcoICRI	GAGCTC	1 cut(s)	1100
EcoO109I	RGGNCCY	2 cut(s)	1360, 1600
EcoO65I	GGTNACC	1 cut(s)	1340
EcoRI	GAATTC	2 cut(s)	1620, 1685
EcoRII	CCWGG	3 cut(s)	2271, 2368, 2461
EcoRV	GATATC	2 cut(s)	2470, 2518
EcoT14I	CCWWGG	3 cut(s)	11, 1119, 2814
EcoT22I	ATGCAT	2 cut(s)	2179, 2390
EcoT38I	GRGCYC	4 cut(s)	710, 1102, 1604, 2574
EgeI	GGCGCC	1 cut(s)	2001
EheI	GGCGCC	1 cut(s)	2001
ErhI	CCWWGG	3 cut(s)	11, 1119, 2814
Esp3I	CGTCTC	2 cut(s)	107, 2266
FalI	AAGNNNNNCTT	2 cut(s)	138, 170
FaqI	GGGAC	6 cut(s)	1129, 1206, 1310, 2304, 2599, 2971
FauI	CCCGC	4 cut(s)	272, 603, 1793, 2330
FauNDI	CATATG	3 cut(s)	1632, 2203, 2563
Fnu4HI	GCNGC	6 cut(s)	141, 180, 268, 1450, 2434, 2938
FokI	GGATG	4 cut(s)	916, 1961, 2752, 2841
FriOI	GRGCYC	4 cut(s)	710, 1102, 1604, 2574
Fsp4HI	GCNGC	6 cut(s)	141, 180, 268, 1450, 2434, 2938
GlaI	GCGC	1 cut(s)	2001
GluI	GCNGC	6 cut(s)	141, 180, 268, 1450, 2434, 2938
GsaI	CCCAGC	1 cut(s)	1739
GsuI	CTGGAG	3 cut(s)	343, 1586, 2727
HaeII	RGCGCY	1 cut(s)	2003
HaeIII	GGCC	6 cut(s)	173, 1428, 1602, 2476, 2639, 2794
HapII	CCGG	1 cut(s)	1158
HhaI	GCGC	1 cut(s)	2002
Hin1I	GRCGYC	1 cut(s)	2000
Hin6I	GCGC	1 cut(s)	2000
HinP1I	GCGC	1 cut(s)	2000
HincII	GTYRAC	2 cut(s)	2850, 2863
HindII	GTYRAC	2 cut(s)	2850, 2863
HpaII	CCGG	1 cut(s)	1158
HphI	GGTGA	6 cut(s)	1410, 1670, 2129, 2246, 2477, 2579
Hpy166II	GTNNAC	7 cut(s)	334, 604, 1929, 2254, 2646, 2850, 2863
Hpy8I	GTNNAC	7 cut(s)	334, 604, 1929, 2254, 2646, 2850, 2863
HpyAV	CCTTC	5 cut(s)	222, 525, 1403, 1968, 2279
HpyCH4III	ACNGT	7 cut(s)	118, 450, 824, 859, 2680, 2759, 2789
HpyCH4IV	ACGT	5 cut(s)	72, 1083, 1706, 2600, 2732
HpySE526I	ACGT	5 cut(s)	72, 1083, 1706, 2600, 2732
Hsp92I	GRCGYC	1 cut(s)	2000
HspAI	GCGC	1 cut(s)	2000
KasI	GGCGCC	1 cut(s)	1999
Kpn2I	TCCGGA	1 cut(s)	1157
Kzo9I	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
LguI	GCTCTTC	1 cut(s)	715
LmnI	GCTCC	8 cut(s)	469, 745, 1105, 1248, 1567, 2288, 2359, 2746
Lsp1109I	GCAGC	6 cut(s)	127, 166, 254, 1436, 2445, 2949
MabI	ACCWGGT	1 cut(s)	2461
MaeII	ACGT	5 cut(s)	72, 1083, 1706, 2600, 2732
MaeIII	GTNAC	6 cut(s)	764, 1169, 1340, 1702, 1902, 2117
MalI	GATC	8 cut(s)	1274, 1516, 1758, 1813, 1872, 2418, 2709, 2994
MboI	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
MfeI	CAATTG	2 cut(s)	1982, 2016
MflI	RGATCY	1 cut(s)	1870
MhlI	GDGCHC	5 cut(s)	535, 710, 1102, 1604, 2574
MlsI	TGGCCA	2 cut(s)	173, 2476
MluNI	TGGCCA	2 cut(s)	173, 2476
Mly113I	GGCGCC	1 cut(s)	2000
MlyI	GAGTC	5 cut(s)	761, 1853, 1910, 1915, 2660
MmeI	TCCRAC	4 cut(s)	336, 671, 960, 2067
Mox20I	TGGCCA	2 cut(s)	173, 2476
Mph1103I	ATGCAT	2 cut(s)	2179, 2390
MroI	TCCGGA	1 cut(s)	1157
MroXI	GAANNNNTTC	4 cut(s)	408, 2543, 2779, 2884
MscI	TGGCCA	2 cut(s)	173, 2476
MseI	TTAA	8 cut(s)	638, 720, 755, 926, 1011, 1478, 1644, 1691
MslI	CAYNNNNRTG	4 cut(s)	972, 1223, 1280, 2579
Msp20I	TGGCCA	2 cut(s)	173, 2476
MspA1I	CMGCKG	2 cut(s)	267, 1449
MspCI	CTTAAG	1 cut(s)	1690
MspI	CCGG	1 cut(s)	1158
MspR9I	CCNGG	3 cut(s)	2273, 2370, 2463
MunI	CAATTG	2 cut(s)	1982, 2016
Mva1269I	GAATGC	2 cut(s)	350, 2179
MvaI	CCWGG	3 cut(s)	2273, 2370, 2463
NarI	GGCGCC	1 cut(s)	2000
NdeI	CATATG	3 cut(s)	1632, 2203, 2563
NdeII	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
NlaIV	GGNNCC	7 cut(s)	360, 532, 1117, 1601, 1602, 2001, 2615
NmuCI	GTSAC	3 cut(s)	764, 1902, 2117
NsiI	ATGCAT	2 cut(s)	2179, 2390
NspI	RCATGY	5 cut(s)	1577, 1963, 2086, 2218, 2392
NspV	TTCGAA	1 cut(s)	215
PaeR7I	CTCGAG	1 cut(s)	1422
PagI	TCATGA	3 cut(s)	412, 1275, 1840
PceI	AGGCCT	2 cut(s)	1428, 2639
PciI	ACATGT	3 cut(s)	1573, 1959, 2082
PciSI	GCTCTTC	1 cut(s)	715
PctI	GAATGC	2 cut(s)	350, 2179
PdmI	GAANNNNTTC	4 cut(s)	408, 2543, 2779, 2884
PfeI	GAWTC	6 cut(s)	404, 665, 905, 2095, 2837, 2903
PkrI	GCNGC	6 cut(s)	142, 181, 269, 1451, 2435, 2939
PleI	GAGTC	5 cut(s)	761, 1852, 1909, 1915, 2660
PluTI	GGCGCC	1 cut(s)	2003
PpsI	GAGTC	5 cut(s)	761, 1852, 1909, 1915, 2660
PpuMI	RGGWCCY	1 cut(s)	1360
PscI	ACATGT	3 cut(s)	1573, 1959, 2082
PshBI	ATTAAT	1 cut(s)	1644
PsiI	TTATAA	1 cut(s)	3001
Psp124BI	GAGCTC	1 cut(s)	1102
Psp5II	RGGWCCY	1 cut(s)	1360
Psp6I	CCWGG	3 cut(s)	2271, 2368, 2461
PspEI	GGTNACC	1 cut(s)	1340
PspFI	CCCAGC	1 cut(s)	1735
PspGI	CCWGG	3 cut(s)	2271, 2368, 2461
PspN4I	GGNNCC	7 cut(s)	360, 532, 1117, 1601, 1602, 2001, 2615
PspOMI	GGGCCC	1 cut(s)	1600
PspPI	GGNCC	5 cut(s)	1116, 1360, 1600, 1601, 2613
PspPPI	RGGWCCY	1 cut(s)	1360
PspXI	VCTCGAGB	1 cut(s)	1422
PstI	CTGCAG	2 cut(s)	145, 354
PsuI	RGATCY	1 cut(s)	1870
PvuII	CAGCTG	1 cut(s)	1449
RsaI	GTAC	8 cut(s)	54, 253, 452, 1391, 1964, 2659, 2677, 2871
RsaNI	GTAC	8 cut(s)	53, 252, 451, 1390, 1963, 2658, 2676, 2870
RseI	CAYNNNNRTG	4 cut(s)	972, 1223, 1280, 2579
SacI	GAGCTC	1 cut(s)	1102
SapI	GCTCTTC	1 cut(s)	715
SaqAI	TTAA	8 cut(s)	638, 720, 755, 926, 1011, 1478, 1644, 1691
SatI	GCNGC	6 cut(s)	141, 180, 268, 1450, 2434, 2938
Sau3AI	GATC	8 cut(s)	1272, 1514, 1756, 1811, 1870, 2416, 2707, 2992
Sau96I	GGNCC	5 cut(s)	1116, 1360, 1600, 1601, 2613
ScaI	AGTACT	3 cut(s)	452, 2659, 2677
SchI	GAGTC	5 cut(s)	761, 1853, 1910, 1915, 2660
ScrFI	CCNGG	3 cut(s)	2273, 2370, 2463
SduI	GDGCHC	5 cut(s)	535, 710, 1102, 1604, 2574
SexAI	ACCWGGT	1 cut(s)	2461
SfcI	CTRYAG	4 cut(s)	141, 247, 350, 2770
SfoI	GGCGCC	1 cut(s)	2001
Sfr274I	CTCGAG	1 cut(s)	1422
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	3 cut(s)	1116, 1360, 2613
SlaI	CTCGAG	1 cut(s)	1422
SmiMI	CAYNNNNRTG	4 cut(s)	972, 1223, 1280, 2579
SmlI	CTYRAG	4 cut(s)	5, 573, 1422, 1690
SmoI	CTYRAG	4 cut(s)	5, 573, 1422, 1690
SpeI	ACTAGT	1 cut(s)	365
SseBI	AGGCCT	2 cut(s)	1428, 2639
SsiI	CCGC	5 cut(s)	265, 610, 1800, 2129, 2323
SspDI	GGCGCC	1 cut(s)	1999
SstI	GAGCTC	1 cut(s)	1102
StuI	AGGCCT	2 cut(s)	1428, 2639
StyD4I	CCNGG	3 cut(s)	2271, 2368, 2461
StyI	CCWWGG	3 cut(s)	11, 1119, 2814
TaaI	ACNGT	7 cut(s)	118, 450, 824, 859, 2680, 2759, 2789
TaiI	ACGT	5 cut(s)	75, 1086, 1709, 2603, 2735
TaqI	TCGA	5 cut(s)	215, 1423, 1618, 1821, 2706
TaqII	GACCGA	1 cut(s)	2997
TatI	WGTACW	7 cut(s)	52, 251, 450, 1962, 2657, 2675, 2869
TfiI	GAWTC	6 cut(s)	404, 665, 905, 2095, 2837, 2903
Tru1I	TTAA	8 cut(s)	638, 720, 755, 926, 1011, 1478, 1644, 1691
Tru9I	TTAA	8 cut(s)	638, 720, 755, 926, 1011, 1478, 1644, 1691
TscAI	CASTG	9 cut(s)	326, 532, 864, 1172, 1243, 1403, 1478, 2251, 2905
TseFI	GTSAC	3 cut(s)	764, 1902, 2117
TseI	GCWGC	6 cut(s)	140, 179, 267, 1449, 2433, 2937
Tsp45I	GTSAC	3 cut(s)	764, 1902, 2117
TspGWI	ACGGA	1 cut(s)	1092
TspRI	CASTG	9 cut(s)	326, 532, 864, 1172, 1243, 1403, 1478, 2251, 2905
Vha464I	CTTAAG	1 cut(s)	1690
VpaK11BI	GGWCC	3 cut(s)	1116, 1360, 2613
VspI	ATTAAT	1 cut(s)	1644
XapI	RAATTY	5 cut(s)	475, 1214, 1620, 1685, 2777
XbaI	TCTAGA	1 cut(s)	272
XceI	RCATGY	5 cut(s)	1577, 1963, 2086, 2218, 2392
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1658, 2469
XhoI	CTCGAG	1 cut(s)	1422
XmnI	GAANNNNTTC	4 cut(s)	408, 2543, 2779, 2884
ZrmI	AGTACT	3 cut(s)	452, 2659, 2677
Zsp2I	ATGCAT	2 cut(s)	2179, 2390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.