Protein CHUP1, chloroplastic-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 FvH4_3g11100 |
| malus_domestica | MD05G1264200.v1.1 MD10G1242300.v1.1 |
| prunus_persica | Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 Prupe.4G101400_v2.0.a1 |
| pyrus_communis | pycom05g24830 pycom05g24840 pycom10g20290 |
| rosa_chinensis | RchiOBHm_Chr5g0017991 |
| rosa_laevigata | RLG00000032329 |
| rosa_multiflora | Rmu_sc0010280.1_g000003 Rmu_sc0011118.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00059610 |
| rosa_rugosa | Rorug05G0039500 |
| rosa_samantha | Rh5AG132400 Rh5BG130500 Rh5CG142900 Rh5DG132500 |
| rosa_wichuraiana | Rw5G011530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1076, 2058 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2121 |
| AccI | GTMKAC | 1 cut(s) | 2154 |
| AccII | CGCG | 3 cut(s) | 262, 264, 2408 |
| AciI | CCGC | 5 cut(s) | 203, 206, 981, 2068, 2306 |
| AclWI | GGATC | 4 cut(s) | 232, 1186, 1321, 2309 |
| AcoI | YGGCCR | 1 cut(s) | 1892 |
| AcsI | RAATTY | 8 cut(s) | 44, 913, 958, 1389, 1727, 1735, 2139, 2364 |
| AcuI | CTGAAG | 5 cut(s) | 383, 689, 1983, 2273, 2324 |
| AcyI | GRCGYC | 2 cut(s) | 682, 2187 |
| AfaI | GTAC | 4 cut(s) | 1040, 1539, 2050, 2264 |
| AfeI | AGCGCT | 1 cut(s) | 272 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 61, 212, 903, 907, 1407, 2121 |
| AflIII | ACRYGT | 1 cut(s) | 2406 |
| AgsI | TTSAA | 8 cut(s) | 105, 610, 854, 877, 1069, 1608, 1781, 2107 |
| AhlI | ACTAGT | 1 cut(s) | 554 |
| AjnI | CCWGG | 1 cut(s) | 60 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 48, 80, 1914, 1946 |
| AleI | CACNNNNGTG | 1 cut(s) | 1532 |
| AluBI | AGCT | 9 cut(s) | 254, 376, 475, 487, 508, 697, 703, 892, 1131 |
| AluI | AGCT | 9 cut(s) | 254, 376, 475, 487, 508, 697, 703, 892, 1131 |
| Alw21I | GWGCWC | 2 cut(s) | 299, 1018 |
| Alw26I | GTCTC | 2 cut(s) | 563, 1709 |
| AlwI | GGATC | 4 cut(s) | 232, 1186, 1321, 2309 |
| Ama87I | CYCGRG | 2 cut(s) | 357, 460 |
| Aor51HI | AGCGCT | 1 cut(s) | 272 |
| AoxI | GGCC | 6 cut(s) | 1094, 1380, 1409, 1627, 1791, 1892 |
| ApoI | RAATTY | 8 cut(s) | 44, 913, 958, 1389, 1727, 1735, 2139, 2364 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 618, 650 |
| AspLEI | GCGC | 2 cut(s) | 264, 273 |
| AspS9I | GGNCC | 3 cut(s) | 216, 1380, 1628 |
| AsuC2I | CCSGG | 3 cut(s) | 358, 359, 1631 |
| AsuHPI | GGTGA | 4 cut(s) | 181, 332, 505, 922 |
| AsuII | TTCGAA | 1 cut(s) | 77 |
| AsuNHI | GCTAGC | 1 cut(s) | 892 |
| AvaI | CYCGRG | 2 cut(s) | 357, 460 |
| AvaII | GGWCC | 1 cut(s) | 216 |
| AxyI | CCTNAGG | 1 cut(s) | 902 |
| BanII | GRGCYC | 1 cut(s) | 1549 |
| BbsI | GAAGAC | 4 cut(s) | 173, 1168, 1203, 1962 |
| Bbv12I | GWGCWC | 2 cut(s) | 299, 1018 |
| BbvCI | CCTCAGC | 1 cut(s) | 804 |
| BccI | CCATC | 6 cut(s) | 25, 1004, 1226, 1363, 1439, 1619 |
| BciT130I | CCWGG | 1 cut(s) | 62 |
| BciVI | GTATCC | 2 cut(s) | 342, 1256 |
| BclI | TGATCA | 1 cut(s) | 379 |
| BcnI | CCSGG | 3 cut(s) | 358, 359, 1631 |
| BcoDI | GTCTC | 2 cut(s) | 563, 1709 |
| BcuI | ACTAGT | 1 cut(s) | 554 |
| BfaI | CTAG | 8 cut(s) | 539, 555, 893, 1026, 1428, 1521, 1593, 2219 |
| BfmI | CTRYAG | 3 cut(s) | 183, 698, 1936 |
| BfoI | RGCGCY | 1 cut(s) | 274 |
| BfuI | GTATCC | 2 cut(s) | 342, 1256 |
| BglII | AGATCT | 1 cut(s) | 1942 |
| BmcAI | AGTACT | 1 cut(s) | 1040 |
| Bme1390I | CCNGG | 4 cut(s) | 62, 358, 359, 1631 |
| Bme18I | GGWCC | 1 cut(s) | 216 |
| BmeT110I | CYCGRG | 2 cut(s) | 357, 460 |
| BmgT120I | GGNCC | 3 cut(s) | 216, 1380, 1628 |
| BmiI | GGNNCC | 3 cut(s) | 66, 217, 1435 |
| BmrFI | CCNGG | 4 cut(s) | 62, 358, 359, 1631 |
| BmrI | ACTGGG | 1 cut(s) | 742 |
| BmsI | GCATC | 6 cut(s) | 653, 2076, 2115, 2205, 2206, 2380 |
| BmtI | GCTAGC | 1 cut(s) | 896 |
| BmuI | ACTGGG | 1 cut(s) | 742 |
| BpiI | GAAGAC | 4 cut(s) | 173, 1168, 1203, 1962 |
| BpmI | CTGGAG | 1 cut(s) | 1976 |
| Bpu10I | CCTNAGC | 2 cut(s) | 804, 818 |
| Bpu14I | TTCGAA | 1 cut(s) | 77 |
| BpuEI | CTTGAG | 6 cut(s) | 497, 509, 1269, 1405, 1704, 1931 |
| BpuMI | CCSGG | 3 cut(s) | 358, 359, 1631 |
| Bsa29I | ATCGAT | 2 cut(s) | 38, 578 |
| BsaHI | GRCGYC | 2 cut(s) | 682, 2187 |
| BsaJI | CCNNGG | 5 cut(s) | 171, 357, 461, 630, 1406 |
| BsaWI | WCCGGW | 1 cut(s) | 342 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 404, 410, 434, 440 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 61, 212, 903, 907, 1407, 2121 |
| Bse118I | RCCGGY | 1 cut(s) | 191 |
| Bse1I | ACTGG | 4 cut(s) | 748, 1097, 1274, 1959 |
| Bse21I | CCTNAGG | 1 cut(s) | 902 |
| Bse3DI | GCAATG | 1 cut(s) | 2328 |
| BseBI | CCWGG | 1 cut(s) | 62 |
| BseCI | ATCGAT | 2 cut(s) | 38, 578 |
| BseDI | CCNNGG | 5 cut(s) | 171, 357, 461, 630, 1406 |
| BseGI | GGATG | 7 cut(s) | 319, 743, 944, 1450, 1639, 1987, 2130 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 61, 212, 903, 907, 1407, 2121 |
| BseMI | GCAATG | 1 cut(s) | 2328 |
| BseNI | ACTGG | 4 cut(s) | 748, 1097, 1274, 1959 |
| BseRI | GAGGAG | 4 cut(s) | 604, 902, 1009, 1488 |
| BsgI | GTGCAG | 2 cut(s) | 1212, 1226 |
| Bsh1236I | CGCG | 3 cut(s) | 262, 264, 2408 |
| BshFI | GGCC | 6 cut(s) | 1096, 1382, 1411, 1629, 1793, 1894 |
| BshVI | ATCGAT | 2 cut(s) | 38, 578 |
| BsiHKAI | GWGCWC | 2 cut(s) | 299, 1018 |
| BsiHKCI | CYCGRG | 2 cut(s) | 357, 460 |
| BsiSI | CCGG | 5 cut(s) | 192, 343, 358, 1631, 1895 |
| BslFI | GGGAC | 3 cut(s) | 173, 340, 374 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 61, 212, 903, 907, 1407, 2121 |
| BsmAI | GTCTC | 2 cut(s) | 563, 1709 |
| BsmFI | GGGAC | 3 cut(s) | 173, 340, 374 |
| BsmI | GAATGC | 3 cut(s) | 85, 310, 2357 |
| BsnI | GGCC | 6 cut(s) | 1096, 1382, 1411, 1629, 1793, 1894 |
| BsoBI | CYCGRG | 2 cut(s) | 357, 460 |
| Bsp119I | TTCGAA | 1 cut(s) | 77 |
| Bsp1286I | GDGCHC | 3 cut(s) | 299, 1018, 1549 |
| Bsp1407I | TGTACA | 1 cut(s) | 2262 |
| BspACI | CCGC | 5 cut(s) | 203, 206, 981, 2068, 2306 |
| BspANI | GGCC | 6 cut(s) | 1096, 1382, 1411, 1629, 1793, 1894 |
| BspDI | ATCGAT | 2 cut(s) | 38, 578 |
| BspFNI | CGCG | 3 cut(s) | 262, 264, 2408 |
| BspLI | GGNNCC | 3 cut(s) | 66, 217, 1435 |
| BspMAI | CTGCAG | 2 cut(s) | 187, 702 |
| BspOI | GCTAGC | 1 cut(s) | 896 |
| BspPI | GGATC | 4 cut(s) | 232, 1186, 1321, 2309 |
| BspT104I | TTCGAA | 1 cut(s) | 77 |
| BsrDI | GCAATG | 1 cut(s) | 2328 |
| BsrFI | RCCGGY | 1 cut(s) | 191 |
| BsrGI | TGTACA | 1 cut(s) | 2262 |
| BsrI | ACTGG | 4 cut(s) | 748, 1097, 1274, 1959 |
| BssAI | RCCGGY | 1 cut(s) | 191 |
| BssECI | CCNNGG | 5 cut(s) | 171, 357, 461, 630, 1406 |
| BssNI | GRCGYC | 2 cut(s) | 682, 2187 |
| BssT1I | CCWWGG | 2 cut(s) | 171, 1406 |
| Bst2UI | CCWGG | 1 cut(s) | 62 |
| Bst4CI | ACNGT | 3 cut(s) | 1020, 1320, 2053 |
| Bst6I | CTCTTC | 4 cut(s) | 3, 540, 704, 1577 |
| BstACI | GRCGYC | 2 cut(s) | 682, 2187 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 182 |
| BstAUI | TGTACA | 1 cut(s) | 2262 |
| BstBI | TTCGAA | 1 cut(s) | 77 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 901 |
| BstF5I | GGATG | 7 cut(s) | 319, 743, 944, 1450, 1639, 1987, 2130 |
| BstFNI | CGCG | 3 cut(s) | 262, 264, 2408 |
| BstH2I | RGCGCY | 1 cut(s) | 274 |
| BstHHI | GCGC | 2 cut(s) | 264, 273 |
| BstMAI | GTCTC | 2 cut(s) | 563, 1709 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 182, 268, 270, 481, 761, 1460, 1703, 2224 |
| BstNI | CCWGG | 1 cut(s) | 62 |
| BstNSI | RCATGY | 1 cut(s) | 2335 |
| BstSCI | CCNGG | 4 cut(s) | 60, 356, 357, 1629 |
| BstSFI | CTRYAG | 3 cut(s) | 183, 698, 1936 |
| BstUI | CGCG | 3 cut(s) | 262, 264, 2408 |
| BstV2I | GAAGAC | 4 cut(s) | 173, 1168, 1203, 1962 |
| BstX2I | RGATCY | 3 cut(s) | 237, 1942, 2314 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1534 |
| BstYI | RGATCY | 3 cut(s) | 237, 1942, 2314 |
| Bsu15I | ATCGAT | 2 cut(s) | 38, 578 |
| Bsu36I | CCTNAGG | 1 cut(s) | 902 |
| BsuI | GTATCC | 2 cut(s) | 342, 1256 |
| BsuRI | GGCC | 6 cut(s) | 1096, 1382, 1411, 1629, 1793, 1894 |
| BsuTUI | ATCGAT | 2 cut(s) | 38, 578 |
| BtsCI | GGATG | 7 cut(s) | 319, 743, 944, 1450, 1639, 1987, 2130 |
| BtsI | GCAGTG | 1 cut(s) | 1913 |
| BtsIMutI | CAGTG | 3 cut(s) | 1016, 1574, 1913 |
| CfoI | GCGC | 2 cut(s) | 264, 273 |
| Cfr10I | RCCGGY | 1 cut(s) | 191 |
| Cfr13I | GGNCC | 3 cut(s) | 216, 1380, 1628 |
| Cfr9I | CCCGGG | 1 cut(s) | 357 |
| ClaI | ATCGAT | 2 cut(s) | 38, 578 |
| CseI | GACGC | 3 cut(s) | 253, 671, 2195 |
| CsiI | ACCWGGT | 1 cut(s) | 60 |
| Csp6I | GTAC | 4 cut(s) | 1039, 1538, 2049, 2263 |
| CviAII | CATG | 8 cut(s) | 126, 918, 1310, 1416, 1657, 1849, 2266, 2332 |
| CviQI | GTAC | 4 cut(s) | 1039, 1538, 2049, 2263 |
| EaeI | YGGCCR | 1 cut(s) | 1892 |
| Eam1104I | CTCTTC | 4 cut(s) | 3, 540, 704, 1577 |
| EarI | CTCTTC | 4 cut(s) | 3, 540, 704, 1577 |
| Eco130I | CCWWGG | 2 cut(s) | 171, 1406 |
| Eco147I | AGGCCT | 1 cut(s) | 1411 |
| Eco24I | GRGCYC | 1 cut(s) | 1549 |
| Eco32I | GATATC | 1 cut(s) | 1987 |
| Eco47I | GGWCC | 1 cut(s) | 216 |
| Eco47III | AGCGCT | 1 cut(s) | 272 |
| Eco57I | CTGAAG | 5 cut(s) | 383, 689, 1983, 2273, 2324 |
| Eco81I | CCTNAGG | 1 cut(s) | 902 |
| Eco88I | CYCGRG | 2 cut(s) | 357, 460 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 901 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1380 |
| EcoRI | GAATTC | 5 cut(s) | 913, 1389, 1727, 1735, 2364 |
| EcoRII | CCWGG | 1 cut(s) | 60 |
| EcoRV | GATATC | 1 cut(s) | 1987 |
| EcoT14I | CCWWGG | 2 cut(s) | 171, 1406 |
| EcoT38I | GRGCYC | 1 cut(s) | 1549 |
| ErhI | CCWWGG | 2 cut(s) | 171, 1406 |
| FaeI | CATG | 8 cut(s) | 129, 921, 1313, 1419, 1660, 1852, 2269, 2335 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 967, 999, 2141, 2173 |
| FaqI | GGGAC | 3 cut(s) | 173, 340, 374 |
| FatI | CATG | 8 cut(s) | 125, 917, 1309, 1415, 1656, 1848, 2265, 2331 |
| FauI | CCCGC | 1 cut(s) | 988 |
| FauNDI | CATATG | 1 cut(s) | 811 |
| FbaI | TGATCA | 1 cut(s) | 379 |
| FblI | GTMKAC | 1 cut(s) | 2154 |
| FokI | GGATG | 7 cut(s) | 306, 730, 931, 1457, 1646, 1994, 2137 |
| FriOI | GRGCYC | 1 cut(s) | 1549 |
| FspBI | CTAG | 8 cut(s) | 539, 555, 893, 1026, 1428, 1521, 1593, 2219 |
| GlaI | GCGC | 2 cut(s) | 263, 272 |
| GsuI | CTGGAG | 1 cut(s) | 1976 |
| HaeII | RGCGCY | 1 cut(s) | 274 |
| HaeIII | GGCC | 6 cut(s) | 1096, 1382, 1411, 1629, 1793, 1894 |
| HapII | CCGG | 5 cut(s) | 192, 343, 358, 1631, 1895 |
| HgaI | GACGC | 3 cut(s) | 253, 671, 2195 |
| HhaI | GCGC | 2 cut(s) | 264, 273 |
| Hin1I | GRCGYC | 2 cut(s) | 682, 2187 |
| Hin1II | CATG | 8 cut(s) | 129, 921, 1313, 1419, 1660, 1852, 2269, 2335 |
| Hin6I | GCGC | 2 cut(s) | 262, 271 |
| HinP1I | GCGC | 2 cut(s) | 262, 271 |
| HpaII | CCGG | 5 cut(s) | 192, 343, 358, 1631, 1895 |
| HphI | GGTGA | 4 cut(s) | 181, 332, 505, 922 |
| Hpy166II | GTNNAC | 4 cut(s) | 860, 923, 1756, 2155 |
| Hpy188III | TCNNGA | 8 cut(s) | 105, 401, 1026, 1182, 1286, 1337, 1732, 1948 |
| Hpy8I | GTNNAC | 4 cut(s) | 860, 923, 1756, 2155 |
| Hpy99I | CGWCG | 2 cut(s) | 1112, 1562 |
| HpyAV | CCTTC | 6 cut(s) | 79, 848, 1215, 1422, 1591, 2290 |
| HpyCH4III | ACNGT | 3 cut(s) | 1020, 1320, 2053 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 182, 268, 270, 481, 761, 1460, 1703, 2224 |
| Hsp92I | GRCGYC | 2 cut(s) | 682, 2187 |
| Hsp92II | CATG | 8 cut(s) | 129, 921, 1313, 1419, 1660, 1852, 2269, 2335 |
| HspAI | GCGC | 2 cut(s) | 262, 271 |
| Ksp22I | TGATCA | 1 cut(s) | 379 |
| LmnI | GCTCC | 6 cut(s) | 472, 501, 694, 889, 1013, 2044 |
| LweI | GCATC | 6 cut(s) | 653, 2076, 2115, 2205, 2206, 2380 |
| MabI | ACCWGGT | 1 cut(s) | 60 |
| MaeI | CTAG | 8 cut(s) | 539, 555, 893, 1026, 1428, 1521, 1593, 2219 |
| MaeIII | GTNAC | 5 cut(s) | 187, 634, 739, 779, 1334 |
| MflI | RGATCY | 3 cut(s) | 237, 1942, 2314 |
| MhlI | GDGCHC | 3 cut(s) | 299, 1018, 1549 |
| MluI | ACGCGT | 1 cut(s) | 2406 |
| MlyI | GAGTC | 3 cut(s) | 331, 1711, 1967 |
| MmeI | TCCRAC | 2 cut(s) | 75, 359 |
| MseI | TTAA | 4 cut(s) | 974, 1344, 2144, 2232 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1532 |
| MspA1I | CMGCKG | 1 cut(s) | 2306 |
| MspI | CCGG | 5 cut(s) | 192, 343, 358, 1631, 1895 |
| MspR9I | CCNGG | 4 cut(s) | 62, 358, 359, 1631 |
| Mva1269I | GAATGC | 3 cut(s) | 85, 310, 2357 |
| MvaI | CCWGG | 1 cut(s) | 62 |
| MvnI | CGCG | 3 cut(s) | 262, 264, 2408 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 182, 268, 270, 481, 761, 1460, 1703, 2224 |
| NciI | CCSGG | 3 cut(s) | 358, 359, 1631 |
| NdeI | CATATG | 1 cut(s) | 811 |
| NheI | GCTAGC | 1 cut(s) | 892 |
| NlaIII | CATG | 8 cut(s) | 129, 921, 1313, 1419, 1660, 1852, 2269, 2335 |
| NlaIV | GGNNCC | 3 cut(s) | 66, 217, 1435 |
| NmuCI | GTSAC | 5 cut(s) | 187, 634, 739, 779, 1334 |
| NspI | RCATGY | 1 cut(s) | 2335 |
| NspV | TTCGAA | 1 cut(s) | 77 |
| OliI | CACNNNNGTG | 1 cut(s) | 1532 |
| PceI | AGGCCT | 1 cut(s) | 1411 |
| PctI | GAATGC | 3 cut(s) | 85, 310, 2357 |
| PfeI | GAWTC | 7 cut(s) | 404, 1069, 1185, 1589, 1601, 2078, 2210 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2121 |
| PleI | GAGTC | 3 cut(s) | 331, 1711, 1966 |
| PpsI | GAGTC | 3 cut(s) | 331, 1711, 1966 |
| PsiI | TTATAA | 2 cut(s) | 1076, 2058 |
| Psp6I | CCWGG | 1 cut(s) | 60 |
| PspGI | CCWGG | 1 cut(s) | 60 |
| PspN4I | GGNNCC | 3 cut(s) | 66, 217, 1435 |
| PspPI | GGNCC | 3 cut(s) | 216, 1380, 1628 |
| PstI | CTGCAG | 2 cut(s) | 187, 702 |
| PsuI | RGATCY | 3 cut(s) | 237, 1942, 2314 |
| RsaI | GTAC | 4 cut(s) | 1040, 1539, 2050, 2264 |
| RsaNI | GTAC | 4 cut(s) | 1039, 1538, 2049, 2263 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1532 |
| SaqAI | TTAA | 4 cut(s) | 974, 1344, 2144, 2232 |
| Sau96I | GGNCC | 3 cut(s) | 216, 1380, 1628 |
| ScaI | AGTACT | 1 cut(s) | 1040 |
| SchI | GAGTC | 3 cut(s) | 331, 1711, 1967 |
| ScrFI | CCNGG | 4 cut(s) | 62, 358, 359, 1631 |
| SduI | GDGCHC | 3 cut(s) | 299, 1018, 1549 |
| SexAI | ACCWGGT | 1 cut(s) | 60 |
| SfaNI | GCATC | 6 cut(s) | 653, 2076, 2115, 2205, 2206, 2380 |
| SfcI | CTRYAG | 3 cut(s) | 183, 698, 1936 |
| SfuI | TTCGAA | 1 cut(s) | 77 |
| SinI | GGWCC | 1 cut(s) | 216 |
| SmaI | CCCGGG | 1 cut(s) | 359 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1532 |
| SmlI | CTYRAG | 6 cut(s) | 476, 488, 1284, 1384, 1719, 1946 |
| SmoI | CTYRAG | 6 cut(s) | 476, 488, 1284, 1384, 1719, 1946 |
| SpeI | ACTAGT | 1 cut(s) | 554 |
| SseBI | AGGCCT | 1 cut(s) | 1411 |
| SsiI | CCGC | 5 cut(s) | 203, 206, 981, 2068, 2306 |
| SspMI | CTAG | 8 cut(s) | 539, 555, 893, 1026, 1428, 1521, 1593, 2219 |
| StuI | AGGCCT | 1 cut(s) | 1411 |
| StyD4I | CCNGG | 4 cut(s) | 60, 356, 357, 1629 |
| StyI | CCWWGG | 2 cut(s) | 171, 1406 |
| TaaI | ACNGT | 3 cut(s) | 1020, 1320, 2053 |
| TaqII | GACCGA | 1 cut(s) | 622 |
| TatI | WGTACW | 2 cut(s) | 1038, 2262 |
| TauI | GCSGC | 1 cut(s) | 208 |
| TfiI | GAWTC | 7 cut(s) | 404, 1069, 1185, 1589, 1601, 2078, 2210 |
| Tru1I | TTAA | 4 cut(s) | 974, 1344, 2144, 2232 |
| Tru9I | TTAA | 4 cut(s) | 974, 1344, 2144, 2232 |
| TscAI | CASTG | 3 cut(s) | 1023, 1581, 1920 |
| TseFI | GTSAC | 5 cut(s) | 187, 634, 739, 779, 1334 |
| Tsp45I | GTSAC | 5 cut(s) | 187, 634, 739, 779, 1334 |
| TspDTI | ATGAA | 7 cut(s) | 308, 906, 1298, 1404, 1595, 2187, 2357 |
| TspMI | CCCGGG | 1 cut(s) | 357 |
| TspRI | CASTG | 3 cut(s) | 1023, 1581, 1920 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2121 |
| VpaK11BI | GGWCC | 1 cut(s) | 216 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 901 |
| XapI | RAATTY | 8 cut(s) | 44, 913, 958, 1389, 1727, 1735, 2139, 2364 |
| XbaI | TCTAGA | 1 cut(s) | 1025 |
| XceI | RCATGY | 1 cut(s) | 2335 |
| XmaI | CCCGGG | 1 cut(s) | 357 |
| XmiI | GTMKAC | 1 cut(s) | 2154 |
| XspI | CTAG | 8 cut(s) | 539, 555, 893, 1026, 1428, 1521, 1593, 2219 |
| ZrmI | AGTACT | 1 cut(s) | 1040 |