Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008284

Physical Location & Seq

Genomic Coordinates Reverse (-)

24148302 .. 24150659

Gene Structure 2358 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGATGGGGCGAAGGGAAAACCGAGACGATGGGTTTGGGTCGTCGGGGCGGTGATCGCCGTCTTCGTTGCCGTCGCCATGACATCCGTACGTGCTCCGAAGATATCGTTCTTTGGACGGTCTAACAAGGCTTGTAATTGTACTCAGGAAACGCATAAGTACAGTGGGATAGTGGAGGATTGTTGTTGTGATTACGAGACCGCAGACCATCTTAACAAGGAAGTTCTGCATCCATCACTCCAAGAACTTGTCAAAACTCCGTTCTTCCGGTATTTCAAGGTTAAGTTATGGTGCGACTGCCCTTTCTGGCCTGATGATGGTATGTGCCGTCTGCGGGATTGCAGTGTATGCGAATGCCCGGATAGTGAGTTCCCCGAGTCATTCAAGAAACCCTATCATGGCCTTCCAGTGGATGATCTTGTTTGTCAGGAGGGAAAGCCTGAAGCAGCTGTTGATCGTACACTAGATAGTAAAGCTTTCAGAGGATGGACAGAAATAGATAATCCCTGGACAAATGACGATGAGACAGACAATGCTGAGATGACATATGTGAATCTTCAACTGAATCCTGAACGATATACCGGCTACACTGGTCCGTCTGCTAGAAGGATATGGGATGCTGTCTACGCAGAGAACTGTCCTAAATATCCATCCGAAGAGTTATGCGCTGAGGAAAGAATTCTGTACAAGTTGATATCTGGTCTTCATTCCTCTATTTCAGTCCACATAGCTTCCGATTATCTCCTTGATGAAACTACACAGATGTGGGGTCCAAATGTCTCATTGTTGTATGATCGGGTCCTAAGATACCCAGACCGTGTCAGAAACTTGTACTTCACTTATCTCTTCGTTCTCCGAGCAGTGACAAAGGCTGCAGATTACTTGGAACATGCTGAATATGACACTGGTAATCCTACTGAGGATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015035 GO:0015036 GO:0016020 GO:0016491 GO:0016667 GO:0016853 GO:0016860 GO:0016864 GO:0019538 GO:0031984 GO:0034975 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04141 ko05110 map04141 map05110

Pfam Domains

Protein Families

ERO1

Protein Analysis

310

Amino Acids

35.49

Weight (kDa)

5.0

Isoelectric Point (pI)

38.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ERO1	PF04137	76 - 308	4.4e-74	Endoplasmic Reticulum Oxidoreductin 1 (ERO1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008284)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38960 AT2G38960 AT2G38960
fragaria_vesca	FvH4_3g05200 FvH4_3g05200
malus_domestica	MD05G1280900.v1.1 MD10G1259300.v1.1
prunus_persica	Prupe.4G084000_v2.0.a1 Prupe.4G084000_v2.0.a1 Prupe.4G084000_v2.0.a1
pyrus_communis	pycom05g26110 pycom10g21580
rosa_chinensis	RchiOBHm_Chr5g0014551
rosa_laevigata	RLG00000032127
rosa_multiflora	Rmu_sc0000120.1_g000002 Rmu_sc0001283.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061930
rosa_rugosa	Rorug05G0019300
rosa_samantha	Rh5AG114500 Rh5BG111400 Rh5CG122900 Rh5DG110800
rosa_wichuraiana	Rw5G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	624
AciI	CCGC	3 cut(s)	50, 201, 334
AcsI	RAATTY	1 cut(s)	678
AcuI	CTGAAG	1 cut(s)	462
AfaI	GTAC	6 cut(s)	90, 142, 161, 460, 686, 833
AfiI	CCNNNNNNNGG	4 cut(s)	317, 334, 398, 409
AgsI	TTSAA	3 cut(s)	277, 385, 560
AjnI	CCWGG	1 cut(s)	506
AleI	CACNNNNGTG	1 cut(s)	763
AloI	GAACNNNNNNTCC	2 cut(s)	353, 385
AluBI	AGCT	3 cut(s)	449, 476, 731
AluI	AGCT	3 cut(s)	449, 476, 731
Alw21I	GWGCWC	1 cut(s)	97
Alw26I	GTCTC	4 cut(s)	19, 191, 518, 784
Ama87I	CYCGRG	1 cut(s)	374
AoxI	GGCC	2 cut(s)	308, 400
ApeKI	GCWGC	2 cut(s)	446, 872
ApoI	RAATTY	1 cut(s)	678
ArsI	GACNNNNNNTTYG	2 cut(s)	18, 50
Asp700I	GAANNNNTTC	1 cut(s)	678
AspLEI	GCGC	1 cut(s)	668
AspS9I	GGNCC	3 cut(s)	593, 770, 799
AsuC2I	CCSGG	1 cut(s)	359
AsuHPI	GGTGA	1 cut(s)	64
AvaI	CYCGRG	1 cut(s)	374
AvaII	GGWCC	3 cut(s)	593, 770, 799
BbsI	GAAGAC	2 cut(s)	55, 695
Bbv12I	GWGCWC	1 cut(s)	97
BbvCI	CCTCAGC	1 cut(s)	669
BbvI	GCAGC	2 cut(s)	458, 859
BccI	CCATC	6 cut(s)	24, 216, 241, 311, 480, 658
BceAI	ACGGC	3 cut(s)	44, 56, 312
BciT130I	CCWGG	1 cut(s)	508
BcnI	CCSGG	1 cut(s)	359
BcoDI	GTCTC	4 cut(s)	19, 191, 518, 784
BfaI	CTAG	2 cut(s)	464, 603
BfmI	CTRYAG	1 cut(s)	873
BisI	GCNGC	2 cut(s)	447, 873
BlsI	GCNGC	2 cut(s)	448, 874
Bme1390I	CCNGG	2 cut(s)	359, 508
Bme18I	GGWCC	3 cut(s)	593, 770, 799
BmeT110I	CYCGRG	1 cut(s)	374
BmgT120I	GGNCC	3 cut(s)	593, 770, 799
BmiI	GGNNCC	2 cut(s)	771, 800
BmrFI	CCNGG	2 cut(s)	359, 508
BmsI	GCATC	2 cut(s)	238, 607
BpiI	GAAGAC	2 cut(s)	55, 695
Bpu10I	CCTNAGC	1 cut(s)	669
BpuMI	CCSGG	1 cut(s)	359
BsaAI	YACGTR	1 cut(s)	92
BsaI	GGTCTC	1 cut(s)	191
BsaJI	CCNNGG	1 cut(s)	506
BsaWI	WCCGGW	1 cut(s)	267
Bsc4I	CCNNNNNNNGG	4 cut(s)	317, 334, 398, 409
Bse118I	RCCGGY	1 cut(s)	581
Bse1I	ACTGG	3 cut(s)	407, 595, 910
BseBI	CCWGG	1 cut(s)	508
BseDI	CCNNGG	1 cut(s)	506
BseGI	GGATG	7 cut(s)	10, 83, 229, 418, 491, 622, 650
BseLI	CCNNNNNNNGG	4 cut(s)	317, 334, 398, 409
BseMII	CTCAG	4 cut(s)	158, 528, 660, 909
BseNI	ACTGG	3 cut(s)	407, 595, 910
BseXI	GCAGC	2 cut(s)	458, 859
BshFI	GGCC	2 cut(s)	310, 402
BsiHKAI	GWGCWC	1 cut(s)	97
BsiHKCI	CYCGRG	1 cut(s)	374
BsiSI	CCGG	3 cut(s)	268, 359, 582
BsiWI	CGTACG	1 cut(s)	88
BslI	CCNNNNNNNGG	4 cut(s)	317, 334, 398, 409
BsmAI	GTCTC	4 cut(s)	19, 191, 518, 784
BsmBI	CGTCTC	1 cut(s)	19
BsmI	GAATGC	1 cut(s)	359
BsnI	GGCC	2 cut(s)	310, 402
Bso31I	GGTCTC	1 cut(s)	191
BsoBI	CYCGRG	1 cut(s)	374
Bsp1286I	GDGCHC	1 cut(s)	97
Bsp1407I	TGTACA	1 cut(s)	684
Bsp143I	GATC	5 cut(s)	54, 415, 454, 793, 922
BspACI	CCGC	3 cut(s)	50, 201, 334
BspANI	GGCC	2 cut(s)	310, 402
BspCNI	CTCAG	4 cut(s)	157, 529, 661, 910
BspLI	GGNNCC	2 cut(s)	771, 800
BspMAI	CTGCAG	1 cut(s)	877
BspTNI	GGTCTC	1 cut(s)	191
BsrFI	RCCGGY	1 cut(s)	581
BsrGI	TGTACA	1 cut(s)	684
BsrI	ACTGG	3 cut(s)	407, 595, 910
BssAI	RCCGGY	1 cut(s)	581
BssECI	CCNNGG	1 cut(s)	506
BssMI	GATC	5 cut(s)	54, 415, 454, 793, 922
Bst2UI	CCWGG	1 cut(s)	508
Bst4CI	ACNGT	4 cut(s)	120, 164, 638, 818
Bst6I	CTCTTC	2 cut(s)	651, 851
BstAPI	GCANNNNNTGC	1 cut(s)	348
BstAUI	TGTACA	1 cut(s)	684
BstBAI	YACGTR	1 cut(s)	92
BstDEI	CTNAG	5 cut(s)	144, 537, 669, 803, 918
BstF5I	GGATG	7 cut(s)	10, 83, 229, 418, 491, 622, 650
BstHHI	GCGC	1 cut(s)	668
BstKTI	GATC	5 cut(s)	57, 418, 457, 796, 925
BstMAI	GTCTC	4 cut(s)	19, 191, 518, 784
BstMBI	GATC	5 cut(s)	54, 415, 454, 793, 922
BstMWI	GCNNNNNNNGC	3 cut(s)	56, 348, 626
BstNI	CCWGG	1 cut(s)	508
BstNSI	RCATGY	1 cut(s)	893
BstSCI	CCNGG	2 cut(s)	357, 506
BstSFI	CTRYAG	1 cut(s)	873
BstV1I	GCAGC	2 cut(s)	458, 859
BstV2I	GAAGAC	2 cut(s)	55, 695
BstX2I	RGATCY	1 cut(s)	922
BstYI	RGATCY	1 cut(s)	922
BsuRI	GGCC	2 cut(s)	310, 402
BtsCI	GGATG	7 cut(s)	10, 83, 229, 418, 491, 622, 650
BtsI	GCAGTG	2 cut(s)	349, 867
BtsIMutI	CAGTG	6 cut(s)	169, 349, 414, 588, 867, 903
CfoI	GCGC	1 cut(s)	668
Cfr10I	RCCGGY	1 cut(s)	581
Cfr13I	GGNCC	3 cut(s)	593, 770, 799
Csp6I	GTAC	6 cut(s)	89, 141, 160, 459, 685, 832
CviAII	CATG	3 cut(s)	79, 398, 890
CviJI	RGCY	9 cut(s)	131, 310, 402, 439, 449, 476, 585, 731, 872
CviKI_1	RGCY	9 cut(s)	131, 310, 402, 439, 449, 476, 585, 731, 872
CviQI	GTAC	6 cut(s)	89, 141, 160, 459, 685, 832
DdeI	CTNAG	5 cut(s)	144, 537, 669, 803, 918
DpnI	GATC	5 cut(s)	56, 417, 456, 795, 924
DpnII	GATC	5 cut(s)	54, 415, 454, 793, 922
Eam1104I	CTCTTC	2 cut(s)	651, 851
EarI	CTCTTC	2 cut(s)	651, 851
Eco31I	GGTCTC	1 cut(s)	191
Eco32I	GATATC	2 cut(s)	105, 696
Eco47I	GGWCC	3 cut(s)	593, 770, 799
Eco57I	CTGAAG	1 cut(s)	462
Eco88I	CYCGRG	1 cut(s)	374
EcoO109I	RGGNCCY	1 cut(s)	799
EcoRI	GAATTC	1 cut(s)	678
EcoRII	CCWGG	1 cut(s)	506
EcoRV	GATATC	2 cut(s)	105, 696
Esp3I	CGTCTC	1 cut(s)	19
FaeI	CATG	3 cut(s)	82, 401, 893
FatI	CATG	3 cut(s)	78, 397, 889
FauI	CCCGC	1 cut(s)	327
FauNDI	CATATG	1 cut(s)	547
FblI	GTMKAC	1 cut(s)	624
Fnu4HI	GCNGC	2 cut(s)	447, 873
FokI	GGATG	7 cut(s)	17, 70, 216, 425, 498, 629, 637
Fsp4HI	GCNGC	2 cut(s)	447, 873
FspBI	CTAG	2 cut(s)	464, 603
GlaI	GCGC	1 cut(s)	667
GluI	GCNGC	2 cut(s)	447, 873
HaeIII	GGCC	2 cut(s)	310, 402
HapII	CCGG	3 cut(s)	268, 359, 582
HhaI	GCGC	1 cut(s)	668
Hin1II	CATG	3 cut(s)	82, 401, 893
Hin6I	GCGC	1 cut(s)	666
HinP1I	GCGC	1 cut(s)	666
HindIII	AAGCTT	1 cut(s)	474
HinfI	GANTC	3 cut(s)	377, 553, 565
HpaII	CCGG	3 cut(s)	268, 359, 582
HphI	GGTGA	1 cut(s)	64
Hpy166II	GTNNAC	3 cut(s)	461, 625, 724
Hpy188I	TCNGA	7 cut(s)	99, 482, 655, 736, 824, 857, 929
Hpy188III	TCNNGA	4 cut(s)	146, 385, 428, 569
Hpy8I	GTNNAC	3 cut(s)	461, 625, 724
Hpy99I	CGWCG	2 cut(s)	47, 77
HpyAV	CCTTC	3 cut(s)	7, 413, 600
HpyCH4III	ACNGT	4 cut(s)	120, 164, 638, 818
HpyCH4IV	ACGT	1 cut(s)	91
HpyCH4V	TGCA	3 cut(s)	229, 342, 875
HpyF10VI	GCNNNNNNNGC	3 cut(s)	56, 348, 626
HpyF3I	CTNAG	5 cut(s)	144, 537, 669, 803, 918
HpySE526I	ACGT	1 cut(s)	91
Hsp92II	CATG	3 cut(s)	82, 401, 893
HspAI	GCGC	1 cut(s)	666
Kzo9I	GATC	5 cut(s)	54, 415, 454, 793, 922
LmnI	GCTCC	1 cut(s)	100
Lsp1109I	GCAGC	2 cut(s)	458, 859
LweI	GCATC	2 cut(s)	238, 607
MaeI	CTAG	2 cut(s)	464, 603
MaeII	ACGT	1 cut(s)	91
MaeIII	GTNAC	1 cut(s)	862
MalI	GATC	5 cut(s)	56, 417, 456, 795, 924
MboI	GATC	5 cut(s)	54, 415, 454, 793, 922
MboII	GAAGA	7 cut(s)	55, 112, 256, 548, 668, 695, 838
MflI	RGATCY	1 cut(s)	922
MhlI	GDGCHC	1 cut(s)	97
MluCI	AATT	2 cut(s)	136, 678
MlyI	GAGTC	1 cut(s)	386
MnlI	CCTC	6 cut(s)	169, 424, 476, 664, 721, 913
MroXI	GAANNNNTTC	1 cut(s)	678
MseI	TTAA	2 cut(s)	213, 282
MslI	CAYNNNNRTG	1 cut(s)	763
MspA1I	CMGCKG	1 cut(s)	449
MspI	CCGG	3 cut(s)	268, 359, 582
MspR9I	CCNGG	2 cut(s)	359, 508
Mva1269I	GAATGC	1 cut(s)	359
MvaI	CCWGG	1 cut(s)	508
MwoI	GCNNNNNNNGC	3 cut(s)	56, 348, 626
NciI	CCSGG	1 cut(s)	359
NdeI	CATATG	1 cut(s)	547
NdeII	GATC	5 cut(s)	54, 415, 454, 793, 922
NlaIII	CATG	3 cut(s)	82, 401, 893
NlaIV	GGNNCC	2 cut(s)	771, 800
NmuCI	GTSAC	1 cut(s)	862
NspI	RCATGY	1 cut(s)	893
OliI	CACNNNNGTG	1 cut(s)	763
PcsI	WCGNNNNNNNCGW	1 cut(s)	63
PctI	GAATGC	1 cut(s)	359
PdmI	GAANNNNTTC	1 cut(s)	678
PfeI	GAWTC	2 cut(s)	553, 565
Pfl23II	CGTACG	1 cut(s)	88
PflFI	GACNNNGTC	1 cut(s)	818
PkrI	GCNGC	2 cut(s)	448, 874
PleI	GAGTC	1 cut(s)	385
PpsI	GAGTC	1 cut(s)	385
Ppu21I	YACGTR	1 cut(s)	92
PpuMI	RGGWCCY	1 cut(s)	799
Psp5II	RGGWCCY	1 cut(s)	799
Psp6I	CCWGG	1 cut(s)	506
PspGI	CCWGG	1 cut(s)	506
PspLI	CGTACG	1 cut(s)	88
PspN4I	GGNNCC	2 cut(s)	771, 800
PspPI	GGNCC	3 cut(s)	593, 770, 799
PspPPI	RGGWCCY	1 cut(s)	799
PstI	CTGCAG	1 cut(s)	877
PsuI	RGATCY	1 cut(s)	922
PsyI	GACNNNGTC	1 cut(s)	818
PvuII	CAGCTG	1 cut(s)	449
RsaI	GTAC	6 cut(s)	90, 142, 161, 460, 686, 833
RsaNI	GTAC	6 cut(s)	89, 141, 160, 459, 685, 832
RseI	CAYNNNNRTG	1 cut(s)	763
SaqAI	TTAA	2 cut(s)	213, 282
SatI	GCNGC	2 cut(s)	447, 873
Sau3AI	GATC	5 cut(s)	54, 415, 454, 793, 922
Sau96I	GGNCC	3 cut(s)	593, 770, 799
SchI	GAGTC	1 cut(s)	386
ScrFI	CCNGG	2 cut(s)	359, 508
SduI	GDGCHC	1 cut(s)	97
SetI	ASST	5 cut(s)	94, 282, 451, 478, 733
SfaNI	GCATC	2 cut(s)	238, 607
SfcI	CTRYAG	1 cut(s)	873
SinI	GGWCC	3 cut(s)	593, 770, 799
SmiMI	CAYNNNNRTG	1 cut(s)	763
Sse9I	AATT	2 cut(s)	136, 678
SsiI	CCGC	3 cut(s)	50, 201, 334
SspMI	CTAG	2 cut(s)	464, 603
StyD4I	CCNGG	2 cut(s)	357, 506
TaaI	ACNGT	4 cut(s)	120, 164, 638, 818
TaiI	ACGT	1 cut(s)	94
TasI	AATT	2 cut(s)	136, 678
TatI	WGTACW	4 cut(s)	140, 159, 684, 831
TfiI	GAWTC	2 cut(s)	553, 565
Tru1I	TTAA	2 cut(s)	213, 282
Tru9I	TTAA	2 cut(s)	213, 282
TscAI	CASTG	6 cut(s)	169, 349, 414, 595, 867, 910
TseFI	GTSAC	1 cut(s)	862
TseI	GCWGC	2 cut(s)	446, 872
Tsp45I	GTSAC	1 cut(s)	862
TspDTI	ATGAA	2 cut(s)	695, 765
TspGWI	ACGGA	3 cut(s)	76, 249, 585
TspRI	CASTG	6 cut(s)	169, 349, 414, 595, 867, 910
Tth111I	GACNNNGTC	1 cut(s)	818
VpaK11BI	GGWCC	3 cut(s)	593, 770, 799
XapI	RAATTY	1 cut(s)	678
XceI	RCATGY	1 cut(s)	893
XmiI	GTMKAC	1 cut(s)	624
XmnI	GAANNNNTTC	1 cut(s)	678
XspI	CTAG	2 cut(s)	464, 603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.