pycom10g21690

Protein of unknown function (DUF1365)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
24263822 .. 24264240
419 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 237 bp
ATGACATTAATTTGCCGGATATGTTGGGGGAATTGGAGTATCAGAGCAAATGCTCCCGCAGATGATCTATTTGTTTCAATCTCAGTTCAACACCCAAACCTTGGCAATTATCTCACAGCTACCCTAAAAGCCAAAAGAGTATCCTCATCTTTGGCGTCTGATCACGCACTGTTTTTCTGGTGGATGCCGCATAAAGTTGCAGTGTGGATATATTGGCATGCTGTTGGATTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

79

Amino Acids

8.88

Weight (kDa)

9.24

Isoelectric Point (pI)

30.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013017)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30130 AT1G30130 AT1G30130
fragaria_vesca FvH4_3g05380 FvH4_3g05380
malus_domestica MD05G1282500.v1.1
prunus_persica Prupe.4G082300_v2.0.a1
pyrus_communis pycom10g21690
rosa_chinensis RchiOBHm_Chr5g0014371
rosa_laevigata RLG00000032102
rosa_multiflora Rmu_sc0000659.1_g000041
rosa_roxburghii Rroxscaffold_1G00062220
rosa_rugosa Rorug05G0017600
rosa_samantha Rh5AG112300 Rh5BG109000 Rh5CG120800 Rh5DG108000
rosa_wichuraiana Rw5G009740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 101
AciI CCGC 2 cut(s) 57, 188
AcyI GRCGYC 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 2 cut(s) 78, 89
AluBI AGCT 1 cut(s) 119
AluI AGCT 1 cut(s) 119
AseI ATTAAT 1 cut(s) 8
BciVI GTATCC 1 cut(s) 151
BclI TGATCA 1 cut(s) 160
BfuI GTATCC 1 cut(s) 151
BisI GCNGC 1 cut(s) 188
BlsI GCNGC 1 cut(s) 189
BmsI GCATC 1 cut(s) 174
BsaHI GRCGYC 1 cut(s) 155
BsaJI CCNNGG 1 cut(s) 100
Bsc4I CCNNNNNNNGG 1 cut(s) 101
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 1 cut(s) 189
BseLI CCNNNNNNNGG 1 cut(s) 101
BseMII CTCAG 1 cut(s) 96
BsiSI CCGG 1 cut(s) 16
BslI CCNNNNNNNGG 1 cut(s) 101
Bsp143I GATC 2 cut(s) 64, 160
BspACI CCGC 2 cut(s) 57, 188
BspCNI CTCAG 1 cut(s) 95
BssECI CCNNGG 1 cut(s) 100
BssMI GATC 2 cut(s) 64, 160
BssNI GRCGYC 1 cut(s) 155
BssT1I CCWWGG 1 cut(s) 100
Bst4CI ACNGT 1 cut(s) 171
BstACI GRCGYC 1 cut(s) 155
BstC8I GCNNGC 1 cut(s) 219
BstDEI CTNAG 1 cut(s) 82
BstF5I GGATG 1 cut(s) 189
BstKTI GATC 2 cut(s) 67, 163
BstMBI GATC 2 cut(s) 64, 160
BstNSI RCATGY 1 cut(s) 221
BsuI GTATCC 1 cut(s) 151
BtsCI GGATG 1 cut(s) 189
BtsI GCAGTG 1 cut(s) 207
BtsIMutI CAGTG 2 cut(s) 167, 207
Cac8I GCNNGC 1 cut(s) 219
CseI GACGC 1 cut(s) 144
CviAII CATG 1 cut(s) 218
CviJI RGCY 2 cut(s) 119, 131
CviKI_1 RGCY 2 cut(s) 119, 131
DdeI CTNAG 1 cut(s) 82
DpnI GATC 2 cut(s) 66, 162
DpnII GATC 2 cut(s) 64, 160
Eco130I CCWWGG 1 cut(s) 100
EcoT14I CCWWGG 1 cut(s) 100
ErhI CCWWGG 1 cut(s) 100
FaeI CATG 1 cut(s) 221
FaiI YATR 4 cut(s) 22, 192, 211, 219
FatI CATG 1 cut(s) 217
FauI CCCGC 1 cut(s) 64
FbaI TGATCA 1 cut(s) 160
Fnu4HI GCNGC 1 cut(s) 188
FokI GGATG 1 cut(s) 196
Fsp4HI GCNGC 1 cut(s) 188
GluI GCNGC 1 cut(s) 188
HapII CCGG 1 cut(s) 16
HgaI GACGC 1 cut(s) 144
Hin1I GRCGYC 1 cut(s) 155
Hin1II CATG 1 cut(s) 221
HpaII CCGG 1 cut(s) 16
Hpy188I TCNGA 2 cut(s) 44, 160
HpyCH4III ACNGT 1 cut(s) 171
HpyCH4V TGCA 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 82
Hsp92I GRCGYC 1 cut(s) 155
Hsp92II CATG 1 cut(s) 221
Ksp22I TGATCA 1 cut(s) 160
Kzo9I GATC 2 cut(s) 64, 160
LmnI GCTCC 1 cut(s) 58
LpnPI CCDG 2 cut(s) 29, 163
LweI GCATC 1 cut(s) 174
MalI GATC 2 cut(s) 66, 162
MboI GATC 2 cut(s) 64, 160
MluCI AATT 3 cut(s) 9, 31, 106
MmeI TCCRAC 1 cut(s) 205
MnlI CCTC 1 cut(s) 154
MseI TTAA 1 cut(s) 8
MspI CCGG 1 cut(s) 16
NdeII GATC 2 cut(s) 64, 160
NlaIII CATG 1 cut(s) 221
NspI RCATGY 1 cut(s) 221
PaeI GCATGC 1 cut(s) 221
PflMI CCANNNNNTGG 1 cut(s) 101
PkrI GCNGC 1 cut(s) 189
PshBI ATTAAT 1 cut(s) 8
SaqAI TTAA 1 cut(s) 8
SatI GCNGC 1 cut(s) 188
Sau3AI GATC 2 cut(s) 64, 160
SetI ASST 2 cut(s) 102, 121
SfaNI GCATC 1 cut(s) 174
SgeI CNNG 6 cut(s) 28, 68, 113, 176, 190, 230
SphI GCATGC 1 cut(s) 221
Sse9I AATT 3 cut(s) 9, 31, 106
SsiI CCGC 2 cut(s) 57, 188
StyI CCWWGG 1 cut(s) 100
TaaI ACNGT 1 cut(s) 171
TasI AATT 3 cut(s) 9, 31, 106
TauI GCSGC 1 cut(s) 190
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
TscAI CASTG 2 cut(s) 174, 207
TspRI CASTG 2 cut(s) 174, 207
Van91I CCANNNNNTGG 1 cut(s) 101
VspI ATTAAT 1 cut(s) 8
XceI RCATGY 1 cut(s) 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.