pycom10g23590

phospholipase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
25687167 .. 25688594
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1293 bp
ATGCTTTCTAGATTTTTTCGAGGAGTTTATATAAAGAAGGCAATAAGGCTCATCCTCCCCACAAGGATGCTTGGTGTGAAGAAAAAGATGGATAGCAATCATAGCATAGCCAAAAAATGGAAGCACCTAAGCGGCGAAAACAAATGGGATGGGCTATTGGATCCTCTAAACATTGATCTCCGTCGATACATAATCCACTACGGAGAAATGGCTCAAGCTACTTATGATGCCTTCAACTCAGAGAAGACATCAAAGTATGCTGGAAGCAGCAGATATGCCAGAAAAAACTTCTTCTCCAAAGTTGGTTTAGAGAAAGGCAACCCTTTTAAGTATAATGTGACTAAGTTTGTGTACGCGACGTCGCAGATTCCAATCCCTGAGGCCTTCCTCATTAAGTCTTTGTCAAGGGAGTCTTGGTGCAAGGAATCAAACTGGATGGCGTATATTGCTGTGGCTACAGATGAAGGGAAGGCTGTGTTGGGCAGGAGAGACATTGTGATTGCTTGGAGAGGCACTGTGCAGTCCTTGGAGTGGGTTAATGACTTGCAATTTAATTTGGTTTCTGCGTCAAACATACTTGGTGAGGAAGGTGATCCAAAGGTGCACCAAGGTTGGTACTCCGTATATACTTCAGATGATTCACGCTCGCCCTTCAACAAAACTAGTGCCAGACACCAGGTCATTGAAGAAGTTATGAGACTAATAGAGCAATACAAGGATGAGGAAATTAGTATCACCATAACAGGGCATAGTTTGGGTGCAGCAGTTGCCACACTAAGTGCAATTGACATTGTTGCCAATGGACTAAACAGGCCAAAGGACATGCCAAACAAAGCCTGCCCAGTTACAGCCATTGTGTTCGCCAGCCCTCGAGTTGGAAACTCGAACTTTGAGAAGGTCTTCTCTGGCTACAAAGATCTTCGAGCCTTGCGCATTCGTAACGCTTTAGATGTTGTCCCTAACTACCCAATTTTATTGGGGTACTCCGACGTGGGAGAAGAGTTGAAAATCGACACGCAAAAATCCAAGTACTTGAAGAGTCCTGGAGGAGTAGCGAGTTGGCATAACATGGAAGGGTACTTGCATGGAGTTGCGGGAACCCAAGGGAGTAAAGGAGGGTTCAAGTTGGAAGTCAAGCGTGACATAGCACTGATAAATAAAAGTGTTGATGCTTTGAAGGAGGAGTATCTTATACCGGCGTCGTGGCGTTGTGAGGAGAACAAGTGTATGACTCAACTGGAAGATGGTTCTTGGGTGCTCAAGGACCATGAGGATGATGATGATCAATTCTGA

Protein Analysis

431

Amino Acids

48.56

Weight (kDa)

8.82

Isoelectric Point (pI)

41.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 166 - 324 1.9e-36 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 362
Acc16I TGCGCA 1 cut(s) 932
AccB7I CCANNNNNTGG 1 cut(s) 117
AccII CGCG 1 cut(s) 356
AciI CCGC 2 cut(s) 132, 1094
AclWI GGATC 3 cut(s) 155, 168, 587
AcuI CTGAAG 1 cut(s) 615
AcyI GRCGYC 2 cut(s) 359, 1199
AdeI CACNNNGTG 1 cut(s) 779
AfaI GTAC 5 cut(s) 353, 617, 983, 1031, 1079
AfiI CCNNNNNNNGG 4 cut(s) 117, 531, 744, 875
AgsI TTSAA 7 cut(s) 235, 655, 686, 1006, 1036, 1123, 1177
AhdI GACNNNNNGTC 1 cut(s) 677
AhlI ACTAGT 1 cut(s) 662
AjiI CACGTC 1 cut(s) 991
AjnI CCWGG 2 cut(s) 675, 1042
AjuI GAANNNNNNNTTGG 2 cut(s) 461, 493
AluBI AGCT 1 cut(s) 218
AluI AGCT 1 cut(s) 218
Alw21I GWGCWC 2 cut(s) 606, 1260
Alw26I GTCTC 2 cut(s) 483, 691
Alw44I GTGCAC 1 cut(s) 602
AlwI GGATC 3 cut(s) 155, 168, 587
Ama87I CYCGRG 1 cut(s) 870
AoxI GGCC 2 cut(s) 381, 812
ApaLI GTGCAC 1 cut(s) 602
ApeKI GCWGC 2 cut(s) 267, 761
Asp700I GAANNNNTTC 1 cut(s) 899
AspLEI GCGC 1 cut(s) 933
AspS9I GGNCC 1 cut(s) 1264
AsuHPI GGTGA 3 cut(s) 593, 602, 727
AvaI CYCGRG 1 cut(s) 870
AvaII GGWCC 1 cut(s) 1264
AxyI CCTNAGG 1 cut(s) 378
BaeGI GKGCMC 1 cut(s) 606
BamHI GGATCC 1 cut(s) 160
BbsI GAAGAC 2 cut(s) 251, 892
Bbv12I GWGCWC 2 cut(s) 606, 1260
BbvI GCAGC 2 cut(s) 279, 773
BccI CCATC 4 cut(s) 82, 143, 430, 1238
BciT130I CCWGG 2 cut(s) 677, 1044
BclI TGATCA 1 cut(s) 1282
BcoDI GTCTC 2 cut(s) 483, 691
BcuI ACTAGT 1 cut(s) 662
BfaI CTAG 2 cut(s) 9, 663
BfmI CTRYAG 1 cut(s) 456
BglII AGATCT 1 cut(s) 916
BisI GCNGC 3 cut(s) 133, 268, 762
BlsI GCNGC 3 cut(s) 134, 269, 763
BmcAI AGTACT 1 cut(s) 1031
Bme1390I CCNGG 2 cut(s) 677, 1044
Bme18I GGWCC 1 cut(s) 1264
BmeRI GACNNNNNGTC 1 cut(s) 677
BmeT110I CYCGRG 1 cut(s) 870
BmgBI CACGTC 1 cut(s) 991
BmgT120I GGNCC 1 cut(s) 1264
BmiI GGNNCC 2 cut(s) 162, 1099
BmrFI CCNGG 2 cut(s) 677, 1044
BmrI ACTGGG 1 cut(s) 836
BmsI GCATC 3 cut(s) 57, 217, 1159
BmuI ACTGGG 1 cut(s) 836
BpiI GAAGAC 2 cut(s) 251, 892
BpmI CTGGAG 1 cut(s) 1065
Bpu10I CCTNAGC 1 cut(s) 128
BpuEI CTTGAG 2 cut(s) 198, 1244
BsaBI GATNNNNATC 3 cut(s) 96, 371, 1281
BsaHI GRCGYC 2 cut(s) 359, 1199
BsaJI CCNNGG 3 cut(s) 525, 607, 1102
BsaXI ACNNNNNCTCC 6 cut(s) 278, 308, 401, 431, 1208, 1238
Bsc4I CCNNNNNNNGG 4 cut(s) 117, 531, 744, 875
Bse118I RCCGGY 1 cut(s) 1195
Bse1I ACTGG 3 cut(s) 437, 842, 1242
Bse21I CCTNAGG 1 cut(s) 378
Bse8I GATNNNNATC 3 cut(s) 96, 371, 1281
BseBI CCWGG 2 cut(s) 677, 1044
BseDI CCNNGG 3 cut(s) 525, 607, 1102
BseGI GGATG 6 cut(s) 51, 72, 154, 441, 724, 1279
BseJI GATNNNNATC 3 cut(s) 96, 371, 1281
BseLI CCNNNNNNNGG 4 cut(s) 117, 531, 744, 875
BseMII CTCAG 2 cut(s) 252, 369
BseNI ACTGG 3 cut(s) 437, 842, 1242
BseRI GAGGAG 4 cut(s) 36, 1062, 1196, 1229
BseSI GKGCMC 1 cut(s) 606
BseXI GCAGC 2 cut(s) 279, 773
BsgI GTGCAG 2 cut(s) 539, 780
Bsh1236I CGCG 1 cut(s) 356
BshFI GGCC 2 cut(s) 383, 814
BsiHKAI GWGCWC 2 cut(s) 606, 1260
BsiHKCI CYCGRG 1 cut(s) 870
BsiSI CCGG 1 cut(s) 1196
BslFI GGGAC 1 cut(s) 941
BslI CCNNNNNNNGG 4 cut(s) 117, 531, 744, 875
BsmAI GTCTC 2 cut(s) 483, 691
BsmFI GGGAC 1 cut(s) 941
BsmI GAATGC 1 cut(s) 933
BsnI GGCC 2 cut(s) 383, 814
BsoBI CYCGRG 1 cut(s) 870
Bsp1286I GDGCHC 2 cut(s) 606, 1260
Bsp143I GATC 5 cut(s) 160, 175, 592, 916, 1282
BspACI CCGC 2 cut(s) 132, 1094
BspANI GGCC 2 cut(s) 383, 814
BspCNI CTCAG 2 cut(s) 251, 370
BspFNI CGCG 1 cut(s) 356
BspLI GGNNCC 2 cut(s) 162, 1099
BspPI GGATC 3 cut(s) 155, 168, 587
BsrFI RCCGGY 1 cut(s) 1195
BsrI ACTGG 3 cut(s) 437, 842, 1242
BssAI RCCGGY 1 cut(s) 1195
BssECI CCNNGG 3 cut(s) 525, 607, 1102
BssMI GATC 5 cut(s) 160, 175, 592, 916, 1282
BssNI GRCGYC 2 cut(s) 359, 1199
BssT1I CCWWGG 3 cut(s) 525, 607, 1102
Bst2UI CCWGG 2 cut(s) 677, 1044
Bst4CI ACNGT 1 cut(s) 517
Bst6I CTCTTC 2 cut(s) 993, 1031
BstACI GRCGYC 2 cut(s) 359, 1199
BstAPI GCANNNNNTGC 1 cut(s) 767
BstC8I GCNNGC 3 cut(s) 647, 838, 865
BstDEI CTNAG 5 cut(s) 128, 238, 342, 378, 776
BstF5I GGATG 6 cut(s) 51, 72, 154, 441, 724, 1279
BstFNI CGCG 1 cut(s) 356
BstHHI GCGC 1 cut(s) 933
BstKTI GATC 5 cut(s) 163, 178, 595, 919, 1285
BstMAI GTCTC 2 cut(s) 483, 691
BstMBI GATC 5 cut(s) 160, 175, 592, 916, 1282
BstMWI GCNNNNNNNGC 3 cut(s) 102, 446, 767
BstNI CCWGG 2 cut(s) 677, 1044
BstNSI RCATGY 1 cut(s) 826
BstSCI CCNGG 2 cut(s) 675, 1042
BstSFI CTRYAG 1 cut(s) 456
BstSLI GKGCMC 1 cut(s) 606
BstUI CGCG 1 cut(s) 356
BstV1I GCAGC 2 cut(s) 279, 773
BstV2I GAAGAC 2 cut(s) 251, 892
BstX2I RGATCY 2 cut(s) 160, 916
BstYI RGATCY 2 cut(s) 160, 916
Bsu36I CCTNAGG 1 cut(s) 378
BsuRI GGCC 2 cut(s) 383, 814
BtrI CACGTC 1 cut(s) 991
BtsCI GGATG 6 cut(s) 51, 72, 154, 441, 724, 1279
BtsIMutI CAGTG 2 cut(s) 513, 1148
Cac8I GCNNGC 3 cut(s) 647, 838, 865
CfoI GCGC 1 cut(s) 933
Cfr10I RCCGGY 1 cut(s) 1195
Cfr13I GGNCC 1 cut(s) 1264
CseI GACGC 2 cut(s) 555, 1188
CsiI ACCWGGT 1 cut(s) 675
Csp6I GTAC 5 cut(s) 352, 616, 982, 1030, 1078
CviAII CATG 4 cut(s) 823, 1069, 1085, 1268
CviQI GTAC 5 cut(s) 352, 616, 982, 1030, 1078
DdeI CTNAG 5 cut(s) 128, 238, 342, 378, 776
DpnI GATC 5 cut(s) 162, 177, 594, 918, 1284
DpnII GATC 5 cut(s) 160, 175, 592, 916, 1282
DraIII CACNNNGTG 1 cut(s) 779
DriI GACNNNNNGTC 1 cut(s) 677
Eam1104I CTCTTC 2 cut(s) 993, 1031
Eam1105I GACNNNNNGTC 1 cut(s) 677
EarI CTCTTC 2 cut(s) 993, 1031
Eco130I CCWWGG 3 cut(s) 525, 607, 1102
Eco147I AGGCCT 1 cut(s) 383
Eco47I GGWCC 1 cut(s) 1264
Eco57I CTGAAG 1 cut(s) 615
Eco81I CCTNAGG 1 cut(s) 378
Eco88I CYCGRG 1 cut(s) 870
EcoRII CCWGG 2 cut(s) 675, 1042
EcoT14I CCWWGG 3 cut(s) 525, 607, 1102
ErhI CCWWGG 3 cut(s) 525, 607, 1102
FaeI CATG 4 cut(s) 826, 1072, 1088, 1271
FalI AAGNNNNNCTT 2 cut(s) 397, 429
FaqI GGGAC 1 cut(s) 941
FatI CATG 4 cut(s) 822, 1068, 1084, 1267
FauI CCCGC 1 cut(s) 1087
FbaI TGATCA 1 cut(s) 1282
Fnu4HI GCNGC 3 cut(s) 133, 268, 762
FokI GGATG 6 cut(s) 38, 79, 161, 448, 731, 1286
Fsp4HI GCNGC 3 cut(s) 133, 268, 762
FspBI CTAG 2 cut(s) 9, 663
FspI TGCGCA 1 cut(s) 932
GlaI GCGC 1 cut(s) 932
GluI GCNGC 3 cut(s) 133, 268, 762
GsuI CTGGAG 1 cut(s) 1065
HaeIII GGCC 2 cut(s) 383, 814
HapII CCGG 1 cut(s) 1196
HgaI GACGC 2 cut(s) 555, 1188
HhaI GCGC 1 cut(s) 933
Hin1I GRCGYC 2 cut(s) 359, 1199
Hin1II CATG 4 cut(s) 826, 1072, 1088, 1271
Hin6I GCGC 1 cut(s) 931
HinP1I GCGC 1 cut(s) 931
HinfI GANTC 6 cut(s) 367, 410, 425, 638, 1039, 1231
HpaII CCGG 1 cut(s) 1196
HphI GGTGA 3 cut(s) 593, 602, 727
Hpy166II GTNNAC 2 cut(s) 352, 604
Hpy188I TCNGA 4 cut(s) 241, 634, 988, 1292
Hpy188III TCNNGA 1 cut(s) 9
Hpy8I GTNNAC 2 cut(s) 352, 604
Hpy99I CGWCG 5 cut(s) 186, 361, 364, 992, 1204
HpyCH4III ACNGT 1 cut(s) 517
HpyCH4IV ACGT 2 cut(s) 359, 990
HpyCH4V TGCA 7 cut(s) 420, 520, 547, 604, 761, 782, 1084
HpyF10VI GCNNNNNNNGC 3 cut(s) 102, 446, 767
HpyF3I CTNAG 5 cut(s) 128, 238, 342, 378, 776
HpySE526I ACGT 2 cut(s) 359, 990
Hsp92I GRCGYC 2 cut(s) 359, 1199
Hsp92II CATG 4 cut(s) 826, 1072, 1088, 1271
HspAI GCGC 1 cut(s) 931
Ksp22I TGATCA 1 cut(s) 1282
Kzo9I GATC 5 cut(s) 160, 175, 592, 916, 1282
Lsp1109I GCAGC 2 cut(s) 279, 773
LweI GCATC 3 cut(s) 57, 217, 1159
MabI ACCWGGT 1 cut(s) 675
MaeI CTAG 2 cut(s) 9, 663
MaeII ACGT 2 cut(s) 359, 990
MaeIII GTNAC 4 cut(s) 337, 844, 938, 1139
MalI GATC 5 cut(s) 162, 177, 594, 918, 1284
MboI GATC 5 cut(s) 160, 175, 592, 916, 1282
MboII GAAGA 9 cut(s) 91, 256, 283, 698, 892, 911, 1010, 1048, 1253
MfeI CAATTG 1 cut(s) 783
MflI RGATCY 2 cut(s) 160, 916
MhlI GDGCHC 2 cut(s) 606, 1260
MluCI AATT 6 cut(s) 548, 553, 726, 783, 969, 1286
MlyI GAGTC 3 cut(s) 419, 1048, 1225
MmeI TCCRAC 3 cut(s) 856, 1011, 1107
MroXI GAANNNNTTC 1 cut(s) 899
MseI TTAA 4 cut(s) 327, 393, 537, 552
MslI CAYNNNNRTG 2 cut(s) 65, 1272
MspI CCGG 1 cut(s) 1196
MspR9I CCNGG 2 cut(s) 677, 1044
MunI CAATTG 1 cut(s) 783
Mva1269I GAATGC 1 cut(s) 933
MvaI CCWGG 2 cut(s) 677, 1044
MvnI CGCG 1 cut(s) 356
MwoI GCNNNNNNNGC 3 cut(s) 102, 446, 767
NdeII GATC 5 cut(s) 160, 175, 592, 916, 1282
NlaIII CATG 4 cut(s) 826, 1072, 1088, 1271
NlaIV GGNNCC 2 cut(s) 162, 1099
NmuCI GTSAC 2 cut(s) 337, 1139
NsbI TGCGCA 1 cut(s) 932
NspI RCATGY 1 cut(s) 826
PaeR7I CTCGAG 1 cut(s) 870
PceI AGGCCT 1 cut(s) 383
PctI GAATGC 1 cut(s) 933
PdmI GAANNNNTTC 1 cut(s) 899
PfeI GAWTC 3 cut(s) 367, 425, 638
PflMI CCANNNNNTGG 1 cut(s) 117
PfoI TCCNGGA 1 cut(s) 1042
PkrI GCNGC 3 cut(s) 134, 269, 763
PleI GAGTC 3 cut(s) 418, 1047, 1225
PpsI GAGTC 3 cut(s) 418, 1047, 1225
Psp6I CCWGG 2 cut(s) 675, 1042
PspGI CCWGG 2 cut(s) 675, 1042
PspN4I GGNNCC 2 cut(s) 162, 1099
PspPI GGNCC 1 cut(s) 1264
PspXI VCTCGAGB 1 cut(s) 870
PsuI RGATCY 2 cut(s) 160, 916
RsaI GTAC 5 cut(s) 353, 617, 983, 1031, 1079
RsaNI GTAC 5 cut(s) 352, 616, 982, 1030, 1078
RseI CAYNNNNRTG 2 cut(s) 65, 1272
SaqAI TTAA 4 cut(s) 327, 393, 537, 552
SatI GCNGC 3 cut(s) 133, 268, 762
Sau3AI GATC 5 cut(s) 160, 175, 592, 916, 1282
Sau96I GGNCC 1 cut(s) 1264
ScaI AGTACT 1 cut(s) 1031
SchI GAGTC 3 cut(s) 419, 1048, 1225
ScrFI CCNGG 2 cut(s) 677, 1044
SduI GDGCHC 2 cut(s) 606, 1260
SetI ASST 9 cut(s) 129, 220, 362, 592, 603, 613, 681, 900, 993
SexAI ACCWGGT 1 cut(s) 675
SfaNI GCATC 3 cut(s) 57, 217, 1159
SfcI CTRYAG 1 cut(s) 456
Sfr274I CTCGAG 1 cut(s) 870
SinI GGWCC 1 cut(s) 1264
SlaI CTCGAG 1 cut(s) 870
SmiMI CAYNNNNRTG 2 cut(s) 65, 1272
SmlI CTYRAG 3 cut(s) 213, 870, 1259
SmoI CTYRAG 3 cut(s) 213, 870, 1259
SpeI ACTAGT 1 cut(s) 662
Sse9I AATT 6 cut(s) 548, 553, 726, 783, 969, 1286
SseBI AGGCCT 1 cut(s) 383
SsiI CCGC 2 cut(s) 132, 1094
SspMI CTAG 2 cut(s) 9, 663
StuI AGGCCT 1 cut(s) 383
StyD4I CCNGG 2 cut(s) 675, 1042
StyI CCWWGG 3 cut(s) 525, 607, 1102
TaaI ACNGT 1 cut(s) 517
TaiI ACGT 2 cut(s) 362, 993
TaqI TCGA 6 cut(s) 19, 184, 871, 884, 922, 1011
TasI AATT 6 cut(s) 548, 553, 726, 783, 969, 1286
TatI WGTACW 1 cut(s) 1029
TauI GCSGC 1 cut(s) 135
TfiI GAWTC 3 cut(s) 367, 425, 638
Tru1I TTAA 4 cut(s) 327, 393, 537, 552
Tru9I TTAA 4 cut(s) 327, 393, 537, 552
TscAI CASTG 2 cut(s) 520, 1155
TseFI GTSAC 2 cut(s) 337, 1139
TseI GCWGC 2 cut(s) 267, 761
Tsp45I GTSAC 2 cut(s) 337, 1139
TspDTI ATGAA 1 cut(s) 477
TspGWI ACGGA 3 cut(s) 170, 216, 610
TspRI CASTG 2 cut(s) 520, 1155
Van91I CCANNNNNTGG 1 cut(s) 117
VneI GTGCAC 1 cut(s) 602
VpaK11BI GGWCC 1 cut(s) 1264
XbaI TCTAGA 1 cut(s) 8
XceI RCATGY 1 cut(s) 826
XhoI CTCGAG 1 cut(s) 870
XmnI GAANNNNTTC 1 cut(s) 899
XspI CTAG 2 cut(s) 9, 663
ZraI GACGTC 1 cut(s) 360
ZrmI AGTACT 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.