pycom10g26650

pyruvate, phosphate dikinase regulatory protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
27915393 .. 27917377
1985 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1221 bp
ATGAATGCTTCTTCCACCTTCAACTTCCCGAACCTCGCTCCCGCGCGCGGTACCAGTCGTGCAAATCCCCAACCAATCCTCAAACCTCTGATCGCCGCCTCCTCCTCCGTACCCGAACCCGATTCCGACCCACATGCGCGGAAAATCAAGGGCAGCCCTCAGCTGACACGATGGTCCCGGGCACGGGCCATACGCTCGGGTCGGAAATTGGACCGCGCGGGACAGAGGACCCAATTTCTGGAGCCGAACCCTCCGCTGCATCCCAGCGACGGCGTATCGCTAGATCCTCATGATAGTAGTTCATCGGGAAGTGACGGCAGTGACGATGACGCGGAGACTACGGCGGGGAAGTCGATATACATGGTTTCTGACGGAACTGGATGGACGGTGGAGCACTCTGTCAACGCCGCGTTGGGGCAGTTCGAGCATTGCTTGGTCGATCGGGGCTGCGCCGTCAATACACATTTGTTTTCTGGGATTGATGATGTAGAGAGGTTGATGGAGATTGTAAAGCAAGCAGCAAAAGAAGGTGCTATGCTTGTGTACACTTTAGCTGACCCGTCAATGGCAGACTCTGCCCGGCAAGCATGCATGCACTGGGGCATACCAATGACAGATATGTTAGGTCCAATCACTGAGGCCATTGCTACCCATTTGGGCGTTTTGCCCTCCGGCCTCCCTCGTGGGGCACCAGGCCGGAGCTTTCCTCTCACCGATGAGTACTTTCGTAGGATTGAAGCCATTGAGTTTTCAATCAAACAAGATGATGGGGCATTGCCCCAGAACTTGCACAAGGCTGACATTGTTCTTGCCGGGGTCTCACGAACTGGGAAGACCCCATTATCAATATATCTTGCGCAAAAAGGTTACAAGGTTGCAAATGTGCCTATTGTGATCGAGGTTCAGCTGCCAAAGAGCCTTTTTGAGGTTGACCCGGAAAAGGTTTTTGGTCTGACTATCAATCCTCTAGTGTTGCAAACAATTAGAACGGCAAGAGCTAAGACTCTGGGGTTCAGTGAAGGAATGAAGAGTAACTATTCCGAGATGGTTCATGTCAGACAGGAGCTGGAGTTTGCTCGAAGGATTCTTGCACAGAATCCTGTCTGGCCAGTAATTGAAGTAACAGGAAAAGCAATAGAAGAAACTGCAGCTGTTGTATTGAGACTTTATCACGACCGGAAGCACAAGTGCTCTATGCCAAGAATATCTAAACGCTACTAG

Protein Analysis

407

Amino Acids

44.38

Weight (kDa)

8.26

Isoelectric Point (pI)

44.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinase-PPPase PF03618 119 - 387 1e-86 Kinase/pyrophosphorylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013019)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 172
Acc16I TGCGCA 1 cut(s) 858
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 2 cut(s) 50, 688
AccB7I CCANNNNNTGG 1 cut(s) 238
AccII CGCG 8 cut(s) 44, 46, 48, 139, 216, 218, 332, 410
AclWI GGATC 1 cut(s) 278
AcoI YGGCCR 1 cut(s) 1106
AfaI GTAC 4 cut(s) 52, 111, 545, 722
AgsI TTSAA 4 cut(s) 22, 737, 753, 1118
AjnI CCWGG 1 cut(s) 691
AjuI GAANNNNNNNTTGG 2 cut(s) 930, 962
AluBI AGCT 7 cut(s) 163, 554, 702, 907, 998, 1066, 1151
AluI AGCT 7 cut(s) 163, 554, 702, 907, 998, 1066, 1151
Alw21I GWGCWC 2 cut(s) 396, 1193
Alw26I GTCTC 3 cut(s) 329, 823, 1156
AlwI GGATC 1 cut(s) 278
AlwNI CAGNNNCTG 2 cut(s) 575, 1066
Ama87I CYCGRG 2 cut(s) 177, 196
AoxI GGCC 5 cut(s) 186, 639, 673, 694, 1106
ApeKI GCWGC 6 cut(s) 153, 256, 447, 518, 907, 1148
Asp718I GGTACC 1 cut(s) 50
AspLEI GCGC 6 cut(s) 46, 48, 139, 218, 452, 859
AspS9I GGNCC 5 cut(s) 174, 186, 211, 228, 626
AsuC2I CCSGG 5 cut(s) 178, 179, 580, 814, 935
AsuHPI GGTGA 1 cut(s) 703
AvaI CYCGRG 2 cut(s) 177, 196
AvaII GGWCC 4 cut(s) 174, 211, 228, 626
BaeGI GKGCMC 2 cut(s) 184, 691
BalI TGGCCA 1 cut(s) 1108
BanI GGYRCC 2 cut(s) 50, 688
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
BauI CACGAG 1 cut(s) 681
BbsI GAAGAC 1 cut(s) 839
Bbv12I GWGCWC 2 cut(s) 396, 1193
BbvCI CCTCAGC 1 cut(s) 159
BbvI GCAGC 6 cut(s) 165, 243, 434, 530, 894, 1160
BccI CCATC 5 cut(s) 165, 375, 493, 761, 1039
BceAI ACGGC 5 cut(s) 286, 331, 357, 437, 1005
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 1 cut(s) 693
BcnI CCSGG 5 cut(s) 178, 179, 580, 814, 935
BcoDI GTCTC 3 cut(s) 329, 823, 1156
BfaI CTAG 3 cut(s) 281, 968, 1219
BfmI CTRYAG 1 cut(s) 1146
BisI GCNGC 8 cut(s) 96, 154, 257, 408, 448, 519, 908, 1149
BlsI GCNGC 8 cut(s) 97, 155, 258, 409, 449, 520, 909, 1150
BmcAI AGTACT 1 cut(s) 722
Bme1390I CCNGG 6 cut(s) 178, 179, 580, 693, 814, 935
Bme18I GGWCC 4 cut(s) 174, 211, 228, 626
BmeT110I CYCGRG 2 cut(s) 177, 196
BmgT120I GGNCC 5 cut(s) 174, 186, 211, 228, 626
BmiI GGNNCC 5 cut(s) 52, 176, 230, 243, 690
BmrFI CCNGG 6 cut(s) 178, 179, 580, 693, 814, 935
BmrI ACTGGG 2 cut(s) 607, 837
BmsI GCATC 1 cut(s) 268
BmuI ACTGGG 2 cut(s) 607, 837
BpiI GAAGAC 1 cut(s) 839
BplI GAGNNNNNCTC 2 cut(s) 691, 723
BpmI CTGGAG 2 cut(s) 260, 1088
Bpu10I CCTNAGC 1 cut(s) 159
BpuMI CCSGG 5 cut(s) 178, 179, 580, 814, 935
BsaI GGTCTC 1 cut(s) 823
BsaJI CCNNGG 2 cut(s) 177, 813
BsaWI WCCGGW 1 cut(s) 1176
BsaXI ACNNNNNCTCC 2 cut(s) 1055, 1085
Bse1I ACTGG 5 cut(s) 54, 382, 602, 832, 1109
Bse3DI GCAATG 3 cut(s) 427, 642, 773
BseBI CCWGG 1 cut(s) 693
BseDI CCNNGG 2 cut(s) 177, 813
BseGI GGATG 2 cut(s) 259, 386
BseMI GCAATG 3 cut(s) 427, 642, 773
BseMII CTCAG 2 cut(s) 173, 627
BseNI ACTGG 5 cut(s) 54, 382, 602, 832, 1109
BsePI GCGCGC 1 cut(s) 44
BseRI GAGGAG 2 cut(s) 91, 94
BseSI GKGCMC 2 cut(s) 184, 691
BseXI GCAGC 6 cut(s) 165, 243, 434, 530, 894, 1160
BseYI CCCAGC 1 cut(s) 263
Bsh1236I CGCG 8 cut(s) 44, 46, 48, 139, 216, 218, 332, 410
Bsh1285I CGRYCG 2 cut(s) 442, 1177
BshFI GGCC 5 cut(s) 188, 641, 675, 696, 1108
BshNI GGYRCC 2 cut(s) 50, 688
BsiEI CGRYCG 2 cut(s) 442, 1177
BsiHKAI GWGCWC 2 cut(s) 396, 1193
BsiHKCI CYCGRG 2 cut(s) 177, 196
BsiSI CCGG 7 cut(s) 178, 580, 672, 697, 813, 935, 1177
BslFI GGGAC 2 cut(s) 160, 234
BsmAI GTCTC 3 cut(s) 329, 823, 1156
BsmFI GGGAC 2 cut(s) 160, 234
BsmI GAATGC 1 cut(s) 10
BsnI GGCC 5 cut(s) 188, 641, 675, 696, 1108
Bso31I GGTCTC 1 cut(s) 823
BsoBI CYCGRG 2 cut(s) 177, 196
Bsp1286I GDGCHC 4 cut(s) 184, 396, 691, 1193
Bsp1407I TGTACA 1 cut(s) 543
Bsp143I GATC 4 cut(s) 90, 283, 439, 894
BspANI GGCC 5 cut(s) 188, 641, 675, 696, 1108
BspCNI CTCAG 2 cut(s) 172, 628
BspFNI CGCG 8 cut(s) 44, 46, 48, 139, 216, 218, 332, 410
BspHI TCATGA 1 cut(s) 289
BspLI GGNNCC 5 cut(s) 52, 176, 230, 243, 690
BspMAI CTGCAG 1 cut(s) 1150
BspPI GGATC 1 cut(s) 278
BspT107I GGYRCC 2 cut(s) 50, 688
BspTNI GGTCTC 1 cut(s) 823
BsrDI GCAATG 3 cut(s) 427, 642, 773
BsrGI TGTACA 1 cut(s) 543
BsrI ACTGG 5 cut(s) 54, 382, 602, 832, 1109
BssECI CCNNGG 2 cut(s) 177, 813
BssHII GCGCGC 1 cut(s) 44
BssMI GATC 4 cut(s) 90, 283, 439, 894
BssSI CACGAG 1 cut(s) 681
Bst2BI CACGAG 1 cut(s) 681
Bst2UI CCWGG 1 cut(s) 693
Bst4CI ACNGT 1 cut(s) 388
Bst6I CTCTTC 1 cut(s) 1022
BstAPI GCANNNNNTGC 1 cut(s) 575
BstAUI TGTACA 1 cut(s) 543
BstC8I GCNNGC 5 cut(s) 46, 516, 585, 589, 593
BstDEI CTNAG 3 cut(s) 159, 636, 999
BstENI CCTNNNNNAGG 1 cut(s) 923
BstF5I GGATG 2 cut(s) 259, 386
BstFNI CGCG 8 cut(s) 44, 46, 48, 139, 216, 218, 332, 410
BstHHI GCGC 6 cut(s) 46, 48, 139, 218, 452, 859
BstKTI GATC 4 cut(s) 93, 286, 442, 897
BstMAI GTCTC 3 cut(s) 329, 823, 1156
BstMBI GATC 4 cut(s) 90, 283, 439, 894
BstMCI CGRYCG 2 cut(s) 442, 1177
BstMWI GCNNNNNNNGC 3 cut(s) 424, 575, 584
BstNI CCWGG 1 cut(s) 693
BstNSI RCATGY 3 cut(s) 137, 591, 595
BstSCI CCNGG 6 cut(s) 176, 177, 578, 691, 812, 933
BstSFI CTRYAG 1 cut(s) 1146
BstSLI GKGCMC 2 cut(s) 184, 691
BstUI CGCG 8 cut(s) 44, 46, 48, 139, 216, 218, 332, 410
BstV1I GCAGC 6 cut(s) 165, 243, 434, 530, 894, 1160
BstV2I GAAGAC 1 cut(s) 839
BstX2I RGATCY 1 cut(s) 283
BstYI RGATCY 1 cut(s) 283
BsuRI GGCC 5 cut(s) 188, 641, 675, 696, 1108
BtsCI GGATG 2 cut(s) 259, 386
BtsI GCAGTG 1 cut(s) 325
BtsIMutI CAGTG 4 cut(s) 325, 595, 633, 1021
Cac8I GCNNGC 5 cut(s) 46, 516, 585, 589, 593
CaiI CAGNNNCTG 2 cut(s) 575, 1066
CciI TCATGA 1 cut(s) 289
CfoI GCGC 6 cut(s) 46, 48, 139, 218, 452, 859
Cfr13I GGNCC 5 cut(s) 174, 186, 211, 228, 626
Cfr9I CCCGGG 1 cut(s) 177
CseI GACGC 1 cut(s) 338
Csp6I GTAC 4 cut(s) 51, 110, 544, 721
CviAII CATG 6 cut(s) 134, 290, 361, 588, 592, 1052
CviQI GTAC 4 cut(s) 51, 110, 544, 721
DdeI CTNAG 3 cut(s) 159, 636, 999
DpnI GATC 4 cut(s) 92, 285, 441, 896
DpnII GATC 4 cut(s) 90, 283, 439, 894
DrdI GACNNNNNNGTC 1 cut(s) 172
DseDI GACNNNNNNGTC 1 cut(s) 172
EaeI YGGCCR 1 cut(s) 1106
Eam1104I CTCTTC 1 cut(s) 1022
EarI CTCTTC 1 cut(s) 1022
Eco31I GGTCTC 1 cut(s) 823
Eco47I GGWCC 4 cut(s) 174, 211, 228, 626
Eco88I CYCGRG 2 cut(s) 177, 196
EcoNI CCTNNNNNAGG 1 cut(s) 923
EcoO109I RGGNCCY 1 cut(s) 228
EcoRII CCWGG 1 cut(s) 691
EcoT22I ATGCAT 1 cut(s) 593
FaeI CATG 6 cut(s) 137, 293, 364, 591, 595, 1055
FaqI GGGAC 2 cut(s) 160, 234
FatI CATG 6 cut(s) 133, 289, 360, 587, 591, 1051
FauI CCCGC 3 cut(s) 49, 211, 337
Fnu4HI GCNGC 8 cut(s) 96, 154, 257, 408, 448, 519, 908, 1149
FokI GGATG 2 cut(s) 246, 393
Fsp4HI GCNGC 8 cut(s) 96, 154, 257, 408, 448, 519, 908, 1149
FspBI CTAG 3 cut(s) 281, 968, 1219
FspI TGCGCA 1 cut(s) 858
GlaI GCGC 6 cut(s) 45, 47, 138, 217, 451, 858
GluI GCNGC 8 cut(s) 96, 154, 257, 408, 448, 519, 908, 1149
GsaI CCCAGC 1 cut(s) 267
GsuI CTGGAG 2 cut(s) 260, 1088
HaeIII GGCC 5 cut(s) 188, 641, 675, 696, 1108
HapII CCGG 7 cut(s) 178, 580, 672, 697, 813, 935, 1177
HgaI GACGC 1 cut(s) 338
HhaI GCGC 6 cut(s) 46, 48, 139, 218, 452, 859
Hin1II CATG 6 cut(s) 137, 293, 364, 591, 595, 1055
Hin6I GCGC 6 cut(s) 44, 46, 137, 216, 450, 857
HinP1I GCGC 6 cut(s) 44, 46, 137, 216, 450, 857
HincII GTYRAC 2 cut(s) 403, 931
HindII GTYRAC 2 cut(s) 403, 931
HinfI GANTC 5 cut(s) 122, 572, 1003, 1084, 1096
HpaII CCGG 7 cut(s) 178, 580, 672, 697, 813, 935, 1177
HphI GGTGA 1 cut(s) 703
Hpy166II GTNNAC 4 cut(s) 403, 544, 546, 931
Hpy188I TCNGA 7 cut(s) 90, 127, 204, 370, 954, 1042, 1058
Hpy188III TCNNGA 6 cut(s) 28, 239, 290, 306, 822, 1172
Hpy8I GTNNAC 4 cut(s) 403, 544, 546, 931
Hpy99I CGWCG 1 cut(s) 272
HpyAV CCTTC 4 cut(s) 28, 521, 1013, 1074
HpyCH4III ACNGT 1 cut(s) 388
HpyCH4V TGCA 9 cut(s) 62, 259, 591, 595, 790, 878, 976, 1091, 1148
HpyF10VI GCNNNNNNNGC 3 cut(s) 424, 575, 584
HpyF3I CTNAG 3 cut(s) 159, 636, 999
Hsp92II CATG 6 cut(s) 137, 293, 364, 591, 595, 1055
HspAI GCGC 6 cut(s) 44, 46, 137, 216, 450, 857
KpnI GGTACC 1 cut(s) 54
Kzo9I GATC 4 cut(s) 90, 283, 439, 894
LmnI GCTCC 5 cut(s) 43, 241, 391, 699, 1063
Lsp1109I GCAGC 6 cut(s) 165, 243, 434, 530, 894, 1160
LweI GCATC 1 cut(s) 268
MaeI CTAG 3 cut(s) 281, 968, 1219
MaeIII GTNAC 5 cut(s) 311, 320, 866, 1031, 1120
MalI GATC 4 cut(s) 92, 285, 441, 896
MauBI CGCGCGCG 1 cut(s) 44
MboI GATC 4 cut(s) 90, 283, 439, 894
MboII GAAGA 4 cut(s) 3, 844, 1039, 1151
MflI RGATCY 1 cut(s) 283
MhlI GDGCHC 4 cut(s) 184, 396, 691, 1193
MlsI TGGCCA 1 cut(s) 1108
MluCI AATT 4 cut(s) 206, 233, 981, 1113
MluNI TGGCCA 1 cut(s) 1108
MlyI GAGTC 2 cut(s) 566, 997
MmeI TCCRAC 2 cut(s) 150, 182
Mox20I TGGCCA 1 cut(s) 1108
Mph1103I ATGCAT 1 cut(s) 593
MscI TGGCCA 1 cut(s) 1108
MslI CAYNNNNRTG 1 cut(s) 608
Msp20I TGGCCA 1 cut(s) 1108
MspA1I CMGCKG 4 cut(s) 163, 256, 907, 1151
MspI CCGG 7 cut(s) 178, 580, 672, 697, 813, 935, 1177
MspR9I CCNGG 6 cut(s) 178, 179, 580, 693, 814, 935
Mva1269I GAATGC 1 cut(s) 10
MvaI CCWGG 1 cut(s) 693
MvnI CGCG 8 cut(s) 44, 46, 48, 139, 216, 218, 332, 410
MwoI GCNNNNNNNGC 3 cut(s) 424, 575, 584
NciI CCSGG 5 cut(s) 178, 179, 580, 814, 935
NdeII GATC 4 cut(s) 90, 283, 439, 894
NlaIII CATG 6 cut(s) 137, 293, 364, 591, 595, 1055
NlaIV GGNNCC 5 cut(s) 52, 176, 230, 243, 690
NmuCI GTSAC 2 cut(s) 311, 320
NsbI TGCGCA 1 cut(s) 858
NsiI ATGCAT 1 cut(s) 593
NspI RCATGY 3 cut(s) 137, 591, 595
PaeI GCATGC 2 cut(s) 591, 595
PagI TCATGA 1 cut(s) 289
PauI GCGCGC 1 cut(s) 44
PcsI WCGNNNNNNNCGW 1 cut(s) 321
PctI GAATGC 1 cut(s) 10
PfeI GAWTC 3 cut(s) 122, 1084, 1096
PflMI CCANNNNNTGG 1 cut(s) 238
PkrI GCNGC 8 cut(s) 97, 155, 258, 409, 449, 520, 909, 1150
Ple19I CGATCG 1 cut(s) 442
PleI GAGTC 2 cut(s) 566, 997
PpsI GAGTC 2 cut(s) 566, 997
PpuMI RGGWCCY 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 228
Psp6I CCWGG 1 cut(s) 691
PspFI CCCAGC 1 cut(s) 263
PspGI CCWGG 1 cut(s) 691
PspN4I GGNNCC 5 cut(s) 52, 176, 230, 243, 690
PspPI GGNCC 5 cut(s) 174, 186, 211, 228, 626
PspPPI RGGWCCY 1 cut(s) 228
PstI CTGCAG 1 cut(s) 1150
PstNI CAGNNNCTG 2 cut(s) 575, 1066
PsuI RGATCY 1 cut(s) 283
PteI GCGCGC 1 cut(s) 44
PvuI CGATCG 1 cut(s) 442
PvuII CAGCTG 3 cut(s) 163, 907, 1151
RsaI GTAC 4 cut(s) 52, 111, 545, 722
RsaNI GTAC 4 cut(s) 51, 110, 544, 721
RseI CAYNNNNRTG 1 cut(s) 608
SatI GCNGC 8 cut(s) 96, 154, 257, 408, 448, 519, 908, 1149
Sau3AI GATC 4 cut(s) 90, 283, 439, 894
Sau96I GGNCC 5 cut(s) 174, 186, 211, 228, 626
ScaI AGTACT 1 cut(s) 722
SchI GAGTC 2 cut(s) 566, 997
ScrFI CCNGG 6 cut(s) 178, 179, 580, 693, 814, 935
SduI GDGCHC 4 cut(s) 184, 396, 691, 1193
SfaNI GCATC 1 cut(s) 268
SfcI CTRYAG 1 cut(s) 1146
SinI GGWCC 4 cut(s) 174, 211, 228, 626
SmaI CCCGGG 1 cut(s) 179
SmiMI CAYNNNNRTG 1 cut(s) 608
SphI GCATGC 2 cut(s) 591, 595
Sse9I AATT 4 cut(s) 206, 233, 981, 1113
SspMI CTAG 3 cut(s) 281, 968, 1219
StyD4I CCNGG 6 cut(s) 176, 177, 578, 691, 812, 933
TaaI ACNGT 1 cut(s) 388
TaqI TCGA 5 cut(s) 353, 423, 438, 897, 1078
TasI AATT 4 cut(s) 206, 233, 981, 1113
TatI WGTACW 2 cut(s) 543, 720
TauI GCSGC 2 cut(s) 98, 410
TfiI GAWTC 3 cut(s) 122, 1084, 1096
TscAI CASTG 4 cut(s) 325, 602, 640, 1021
TseFI GTSAC 2 cut(s) 311, 320
TseI GCWGC 6 cut(s) 153, 256, 447, 518, 907, 1148
Tsp45I GTSAC 2 cut(s) 311, 320
TspDTI ATGAA 4 cut(s) 17, 291, 1040, 1040
TspGWI ACGGA 2 cut(s) 97, 387
TspMI CCCGGG 1 cut(s) 177
TspRI CASTG 4 cut(s) 325, 602, 640, 1021
Van91I CCANNNNNTGG 1 cut(s) 238
VpaK11BI GGWCC 4 cut(s) 174, 211, 228, 626
XagI CCTNNNNNAGG 1 cut(s) 923
XceI RCATGY 3 cut(s) 137, 591, 595
XmaI CCCGGG 1 cut(s) 177
XspI CTAG 3 cut(s) 281, 968, 1219
ZrmI AGTACT 1 cut(s) 722
Zsp2I ATGCAT 1 cut(s) 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.