pycom11g04790

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0010510
Physical Location & Seq
Reverse (-)
3656345 .. 3659568
3224 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04790.4

Sequence Viewer

Length: 1233 bp
ATGGCCCCTGAGTCACTGCTCTTCCCAAAAGAAATGGCTTCGCTCTGTCTCAACTCGCTGCCTCTTCCTCCGCCTTCCCAACCCCGCAAACTCTCAGAATCTCCTCTTCCTCCTCCTTCTTCTTCCTCTTCTTCTTCTTTGTCTTCCAACTCTCTGAATGTTAATAGTTATGGCAGCAGAGGAGAAGCCTTAAAGCCCATTGTCGTCAGTGGCAGCCCGCCCACCTTTGTTTCCGCCCCCGGCCGCCGAATTGTCGCCGTTGGGGATCTTCATGGAGACCTTGGCCAAACAAGATGTGCACTTGAGACAGCTGGTGTGTTGAGTTCTGATGGTGAAGATGTATGGACTGGTGGAGAAACGCTTGGAGATATACTTGATCGCGGTGAAGATGAAATAGCGATTTTGTCCTTGCTTAGATCTTTGGATATGCAGGCAAAAGCTGAAGGCGGAGCAGTTTTTCAGGTCAATGGGAATCATGAGACTATCAATGTGGAAGGGGATTTCCGATACGTGGATACTGGAGGATTTGATGAGTGTCTTGATTTCCTGGAATACTTGGATGACAATCGAGATGACTGGGAAGAAGCTTTTGTTGGCTGGGTTGGTGTCTCTAAAAGGATGAAGGAAGAGAGGAAAATGCCCCAAAATTATTGGGATCCATGGAATCTAGTGAGGAAGCAAAAAGGTGTGATTGCCAGATCAATCCTATTAAGGCCAGGGGGTCCATTGGCACGCGAGTTAGCACGTCATGCTGTTGTTCTTAAGGTTAATGACTGGGTCTTCTGTCACGGTGGTCTTGTTCCTCAACATGTTACGTATGGAGTGGAGAGGATGAACAGGGAAGTATCTGACTGGATGAGAGGTCTCGTTGAGATTGATGACAACCCTCACTTCCCTTTTGTAGCCACCAGGGGCTATGACAGTGTGGTTTGGAACCGATTGTACTCGAGAGACACTTCAGATTTAGATGACTATCAGATTAACCAGATAAATTACATTCTTCAACAGACGCTACAAGCAGTTGGTGCCAAGGGAATGGTGGTGGGGCATACTCCTCAACCTACTGGGGCAAACTGTGAATACGACTGCAGCATATGGCGGATTGACGTGGGGATGTCCAGTGGAGTTCTCAATTCAAGACCCGAGGTTCTAGAAATAAAAGACAATAAAGCAAGAGTTATAAGAAGCAAGAAGGATCCATCCAGTGAATTGACGGTTGTCGATTATATATAG

Protein Analysis

411

Amino Acids

45.3

Weight (kDa)

4.96

Isoelectric Point (pI)

47.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010510)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07010 AT1G07010 AT1G07010
fragaria_vesca FvH4_3g39710 FvH4_3g39710 FvH4_3g39710 FvH4_3g39710 FvH4_3g39710
malus_domestica MD11G1056900.v1.1
prunus_persica Prupe.6G048800_v2.0.a1
pyrus_communis pycom11g04790
rosa_chinensis RchiOBHm_Chr5g0071581
rosa_laevigata RLG00000036227
rosa_multiflora Rmu_sc0005745.1_g000010
rosa_roxburghii Rroxscaffold_1G00009590
rosa_rugosa Rorug05G0413400
rosa_samantha Rh5AG469300 Rh5BG488500 Rh5CG512500 Rh5DG499300
rosa_wichuraiana Rw5G043610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1181
AccB1I GGYRCC 1 cut(s) 1025
AccII CGCG 2 cut(s) 381, 735
AciI CCGC 8 cut(s) 71, 85, 218, 234, 244, 381, 447, 1099
AclWI GGATC 5 cut(s) 273, 650, 663, 1190, 1203
AcoI YGGCCR 2 cut(s) 241, 283
AcuI CTGAAG 2 cut(s) 462, 942
AfaI GTAC 1 cut(s) 944
AfiI CCNNNNNNNGG 1 cut(s) 511
AflII CTTAAG 1 cut(s) 761
AflIII ACRYGT 1 cut(s) 808
AgsI TTSAA 2 cut(s) 1004, 1137
AjiI CACGTC 2 cut(s) 746, 1108
AjnI CCWGG 3 cut(s) 546, 715, 908
AjuI GAANNNNNNNTTGG 2 cut(s) 576, 608
AluBI AGCT 3 cut(s) 311, 440, 587
AluI AGCT 3 cut(s) 311, 440, 587
Alw21I GWGCWC 1 cut(s) 301
Alw26I GTCTC 7 cut(s) 53, 270, 299, 473, 613, 869, 945
Alw44I GTGCAC 1 cut(s) 297
AlwI GGATC 5 cut(s) 273, 650, 663, 1190, 1203
Ama87I CYCGRG 2 cut(s) 946, 1142
AoxI GGCC 4 cut(s) 3, 241, 283, 713
ApaLI GTGCAC 1 cut(s) 297
ApeKI GCWGC 4 cut(s) 58, 174, 213, 1089
AspS9I GGNCC 2 cut(s) 4, 722
AsuC2I CCSGG 1 cut(s) 240
AsuHPI GGTGA 2 cut(s) 344, 395
AvaI CYCGRG 2 cut(s) 946, 1142
AvaII GGWCC 1 cut(s) 722
BaeGI GKGCMC 1 cut(s) 301
BalI TGGCCA 1 cut(s) 285
BamHI GGATCC 2 cut(s) 655, 1195
BanI GGYRCC 1 cut(s) 1025
BbsI GAAGAC 2 cut(s) 135, 772
Bbv12I GWGCWC 1 cut(s) 301
BbvI GCAGC 4 cut(s) 45, 186, 225, 1101
BccI CCATC 2 cut(s) 323, 1207
BceAI ACGGC 1 cut(s) 242
BciT130I CCWGG 3 cut(s) 548, 717, 910
BciVI GTATCC 1 cut(s) 508
BcnI CCSGG 1 cut(s) 240
BcoDI GTCTC 7 cut(s) 53, 270, 299, 473, 613, 869, 945
BfaI CTAG 2 cut(s) 668, 1151
BfmI CTRYAG 1 cut(s) 1087
BfrI CTTAAG 1 cut(s) 761
BfuI GTATCC 1 cut(s) 508
BglII AGATCT 1 cut(s) 416
BisI GCNGC 5 cut(s) 59, 175, 214, 244, 1090
BlsI GCNGC 5 cut(s) 60, 176, 215, 245, 1091
Bme1390I CCNGG 4 cut(s) 240, 548, 717, 910
Bme18I GGWCC 1 cut(s) 722
BmeT110I CYCGRG 2 cut(s) 946, 1142
BmgBI CACGTC 2 cut(s) 746, 1108
BmgT120I GGNCC 2 cut(s) 4, 722
BmiI GGNNCC 6 cut(s) 6, 657, 723, 935, 1027, 1197
BmrFI CCNGG 4 cut(s) 240, 548, 717, 910
BmrI ACTGGG 3 cut(s) 586, 784, 1074
BmuI ACTGGG 3 cut(s) 586, 784, 1074
BoxI GACNNNNGTC 1 cut(s) 1217
BpiI GAAGAC 2 cut(s) 135, 772
BpmI CTGGAG 1 cut(s) 540
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 1 cut(s) 240
BsaAI YACGTR 2 cut(s) 511, 816
BsaBI GATNNNNATC 2 cut(s) 564, 972
BsaI GGTCTC 2 cut(s) 270, 869
BsaJI CCNNGG 7 cut(s) 238, 280, 659, 716, 909, 1029, 1143
Bsc4I CCNNNNNNNGG 1 cut(s) 511
Bse1I ACTGG 8 cut(s) 352, 523, 581, 779, 857, 1069, 1119, 1203
Bse8I GATNNNNATC 2 cut(s) 564, 972
BseBI CCWGG 3 cut(s) 548, 717, 910
BseDI CCNNGG 7 cut(s) 238, 280, 659, 716, 909, 1029, 1143
BseGI GGATG 6 cut(s) 565, 624, 837, 861, 1119, 1199
BseJI GATNNNNATC 2 cut(s) 564, 972
BseLI CCNNNNNNNGG 1 cut(s) 511
BseMII CTCAG 1 cut(s) 108
BseNI ACTGG 8 cut(s) 352, 523, 581, 779, 857, 1069, 1119, 1203
BseRI GAGGAG 4 cut(s) 93, 102, 195, 1044
BseSI GKGCMC 1 cut(s) 301
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 4 cut(s) 45, 186, 225, 1101
BseYI CCCAGC 1 cut(s) 597
Bsh1236I CGCG 2 cut(s) 381, 735
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 4 cut(s) 5, 243, 285, 715
BshNI GGYRCC 1 cut(s) 1025
BsiEI CGRYCG 1 cut(s) 244
BsiHKAI GWGCWC 1 cut(s) 301
BsiHKCI CYCGRG 2 cut(s) 946, 1142
BsiSI CCGG 1 cut(s) 240
BslI CCNNNNNNNGG 1 cut(s) 511
BsmAI GTCTC 7 cut(s) 53, 270, 299, 473, 613, 869, 945
BsnI GGCC 4 cut(s) 5, 243, 285, 715
Bso31I GGTCTC 2 cut(s) 270, 869
BsoBI CYCGRG 2 cut(s) 946, 1142
Bsp1286I GDGCHC 1 cut(s) 301
Bsp143I GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
Bsp19I CCATGG 1 cut(s) 659
BspACI CCGC 8 cut(s) 71, 85, 218, 234, 244, 381, 447, 1099
BspANI GGCC 4 cut(s) 5, 243, 285, 715
BspCNI CTCAG 1 cut(s) 107
BspFNI CGCG 2 cut(s) 381, 735
BspHI TCATGA 1 cut(s) 475
BspLI GGNNCC 6 cut(s) 6, 657, 723, 935, 1027, 1197
BspMAI CTGCAG 1 cut(s) 1091
BspPI GGATC 5 cut(s) 273, 650, 663, 1190, 1203
BspQI GCTCTTC 1 cut(s) 26
BspT107I GGYRCC 1 cut(s) 1025
BspTI CTTAAG 1 cut(s) 761
BspTNI GGTCTC 2 cut(s) 270, 869
BsrI ACTGG 8 cut(s) 352, 523, 581, 779, 857, 1069, 1119, 1203
BssECI CCNNGG 7 cut(s) 238, 280, 659, 716, 909, 1029, 1143
BssMI GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
BssT1I CCWWGG 3 cut(s) 280, 659, 1029
Bst2UI CCWGG 3 cut(s) 548, 717, 910
Bst4CI ACNGT 4 cut(s) 791, 923, 1076, 1216
Bst6I CTCTTC 5 cut(s) 26, 69, 111, 133, 621
BstAFI CTTAAG 1 cut(s) 761
BstAPI GCANNNNNTGC 2 cut(s) 749, 1025
BstBAI YACGTR 2 cut(s) 511, 816
BstC8I GCNNGC 3 cut(s) 218, 432, 733
BstDEI CTNAG 3 cut(s) 9, 94, 413
BstDSI CCRYGG 1 cut(s) 659
BstF5I GGATG 6 cut(s) 565, 624, 837, 861, 1119, 1199
BstFNI CGCG 2 cut(s) 381, 735
BstKTI GATC 6 cut(s) 268, 379, 419, 658, 701, 1198
BstMAI GTCTC 7 cut(s) 53, 270, 299, 473, 613, 869, 945
BstMBI GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 2 cut(s) 749, 1025
BstNI CCWGG 3 cut(s) 548, 717, 910
BstNSI RCATGY 1 cut(s) 812
BstPAI GACNNNNGTC 1 cut(s) 1217
BstSCI CCNGG 4 cut(s) 238, 546, 715, 908
BstSFI CTRYAG 1 cut(s) 1087
BstSLI GKGCMC 1 cut(s) 301
BstSNI TACGTA 1 cut(s) 816
BstUI CGCG 2 cut(s) 381, 735
BstV1I GCAGC 4 cut(s) 45, 186, 225, 1101
BstV2I GAAGAC 2 cut(s) 135, 772
BstX2I RGATCY 4 cut(s) 265, 416, 655, 1195
BstXI CCANNNNNNTGG 1 cut(s) 1036
BstYI RGATCY 4 cut(s) 265, 416, 655, 1195
BstZI CGGCCG 1 cut(s) 241
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 4 cut(s) 5, 243, 285, 715
BtgI CCRYGG 1 cut(s) 659
BtrI CACGTC 2 cut(s) 746, 1108
BtsCI GGATG 6 cut(s) 565, 624, 837, 861, 1119, 1199
BtsI GCAGTG 1 cut(s) 14
BtsIMutI CAGTG 5 cut(s) 14, 214, 928, 1126, 1210
Cac8I GCNNGC 3 cut(s) 218, 432, 733
CciI TCATGA 1 cut(s) 475
Cfr13I GGNCC 2 cut(s) 4, 722
CseI GACGC 1 cut(s) 1018
Csp6I GTAC 1 cut(s) 943
CviAII CATG 5 cut(s) 272, 476, 660, 749, 809
CviQI GTAC 1 cut(s) 943
DdeI CTNAG 3 cut(s) 9, 94, 413
DpnI GATC 6 cut(s) 267, 378, 418, 657, 700, 1197
DpnII GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
EaeI YGGCCR 2 cut(s) 241, 283
EagI CGGCCG 1 cut(s) 241
Eam1104I CTCTTC 5 cut(s) 26, 69, 111, 133, 621
EarI CTCTTC 5 cut(s) 26, 69, 111, 133, 621
EciI GGCGGA 4 cut(s) 60, 223, 462, 1114
EclXI CGGCCG 1 cut(s) 241
Eco105I TACGTA 1 cut(s) 816
Eco130I CCWWGG 3 cut(s) 280, 659, 1029
Eco31I GGTCTC 2 cut(s) 270, 869
Eco47I GGWCC 1 cut(s) 722
Eco52I CGGCCG 1 cut(s) 241
Eco57I CTGAAG 2 cut(s) 462, 942
Eco88I CYCGRG 2 cut(s) 946, 1142
EcoRII CCWGG 3 cut(s) 546, 715, 908
EcoT14I CCWWGG 3 cut(s) 280, 659, 1029
ErhI CCWWGG 3 cut(s) 280, 659, 1029
FaeI CATG 5 cut(s) 275, 479, 663, 752, 812
FatI CATG 5 cut(s) 271, 475, 659, 748, 808
FauI CCCGC 2 cut(s) 92, 225
FauNDI CATATG 1 cut(s) 1094
Fnu4HI GCNGC 5 cut(s) 59, 175, 214, 244, 1090
FokI GGATG 6 cut(s) 572, 631, 844, 868, 1126, 1186
Fsp4HI GCNGC 5 cut(s) 59, 175, 214, 244, 1090
FspBI CTAG 2 cut(s) 668, 1151
GluI GCNGC 5 cut(s) 59, 175, 214, 244, 1090
GsaI CCCAGC 1 cut(s) 601
GsuI CTGGAG 1 cut(s) 540
HaeIII GGCC 4 cut(s) 5, 243, 285, 715
HapII CCGG 1 cut(s) 240
HgaI GACGC 1 cut(s) 1018
Hin1II CATG 5 cut(s) 275, 479, 663, 752, 812
HindIII AAGCTT 1 cut(s) 585
HinfI GANTC 4 cut(s) 11, 98, 472, 664
HpaII CCGG 1 cut(s) 240
HphI GGTGA 2 cut(s) 344, 395
Hpy166II GTNNAC 1 cut(s) 299
Hpy188I TCNGA 7 cut(s) 97, 156, 328, 506, 850, 961, 978
Hpy188III TCNNGA 6 cut(s) 476, 539, 569, 948, 1137, 1151
Hpy8I GTNNAC 1 cut(s) 299
HpyAV CCTTC 6 cut(s) 84, 126, 437, 488, 616, 1186
HpyCH4III ACNGT 4 cut(s) 791, 923, 1076, 1216
HpyCH4IV ACGT 4 cut(s) 510, 745, 815, 1107
HpyCH4V TGCA 3 cut(s) 299, 430, 1089
HpyF10VI GCNNNNNNNGC 2 cut(s) 749, 1025
HpyF3I CTNAG 3 cut(s) 9, 94, 413
HpySE526I ACGT 4 cut(s) 510, 745, 815, 1107
Hsp92II CATG 5 cut(s) 275, 479, 663, 752, 812
Kzo9I GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
LguI GCTCTTC 1 cut(s) 26
LmnI GCTCC 1 cut(s) 449
Lsp1109I GCAGC 4 cut(s) 45, 186, 225, 1101
MaeI CTAG 2 cut(s) 668, 1151
MaeII ACGT 4 cut(s) 510, 745, 815, 1107
MaeIII GTNAC 3 cut(s) 12, 785, 811
MalI GATC 6 cut(s) 267, 378, 418, 657, 700, 1197
MboI GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
MflI RGATCY 4 cut(s) 265, 416, 655, 1195
MhlI GDGCHC 1 cut(s) 301
MlsI TGGCCA 1 cut(s) 285
MluCI AATT 5 cut(s) 249, 646, 991, 1132, 1208
MluNI TGGCCA 1 cut(s) 285
MlyI GAGTC 1 cut(s) 20
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 1 cut(s) 285
MscI TGGCCA 1 cut(s) 285
MseI TTAA 6 cut(s) 162, 191, 710, 762, 768, 981
Msp20I TGGCCA 1 cut(s) 285
MspA1I CMGCKG 1 cut(s) 311
MspCI CTTAAG 1 cut(s) 761
MspI CCGG 1 cut(s) 240
MspR9I CCNGG 4 cut(s) 240, 548, 717, 910
MvaI CCWGG 3 cut(s) 548, 717, 910
MvnI CGCG 2 cut(s) 381, 735
MwoI GCNNNNNNNGC 2 cut(s) 749, 1025
NciI CCSGG 1 cut(s) 240
NcoI CCATGG 1 cut(s) 659
NdeI CATATG 1 cut(s) 1094
NdeII GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
NlaIII CATG 5 cut(s) 275, 479, 663, 752, 812
NlaIV GGNNCC 6 cut(s) 6, 657, 723, 935, 1027, 1197
NmuCI GTSAC 2 cut(s) 12, 785
NspI RCATGY 1 cut(s) 812
PaeR7I CTCGAG 1 cut(s) 946
PagI TCATGA 1 cut(s) 475
PciI ACATGT 1 cut(s) 808
PciSI GCTCTTC 1 cut(s) 26
PfeI GAWTC 3 cut(s) 98, 472, 664
PflFI GACNNNGTC 1 cut(s) 776
PfoI TCCNGGA 1 cut(s) 546
PkrI GCNGC 5 cut(s) 60, 176, 215, 245, 1091
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
Ppu21I YACGTR 2 cut(s) 511, 816
PscI ACATGT 1 cut(s) 808
PshAI GACNNNNGTC 1 cut(s) 1217
PsiI TTATAA 1 cut(s) 1181
Psp6I CCWGG 3 cut(s) 546, 715, 908
PspFI CCCAGC 1 cut(s) 597
PspGI CCWGG 3 cut(s) 546, 715, 908
PspN4I GGNNCC 6 cut(s) 6, 657, 723, 935, 1027, 1197
PspPI GGNCC 2 cut(s) 4, 722
PsrI GAACNNNNNNTAC 2 cut(s) 926, 958
PstI CTGCAG 1 cut(s) 1091
PsuI RGATCY 4 cut(s) 265, 416, 655, 1195
PsyI GACNNNGTC 1 cut(s) 776
PvuII CAGCTG 1 cut(s) 311
RsaI GTAC 1 cut(s) 944
RsaNI GTAC 1 cut(s) 943
SapI GCTCTTC 1 cut(s) 26
SaqAI TTAA 6 cut(s) 162, 191, 710, 762, 768, 981
SatI GCNGC 5 cut(s) 59, 175, 214, 244, 1090
Sau3AI GATC 6 cut(s) 265, 376, 416, 655, 698, 1195
Sau96I GGNCC 2 cut(s) 4, 722
SchI GAGTC 1 cut(s) 20
ScrFI CCNGG 4 cut(s) 240, 548, 717, 910
SduI GDGCHC 1 cut(s) 301
SfcI CTRYAG 1 cut(s) 1087
Sfr274I CTCGAG 1 cut(s) 946
SinI GGWCC 1 cut(s) 722
SlaI CTCGAG 1 cut(s) 946
SmlI CTYRAG 3 cut(s) 302, 761, 946
SmoI CTYRAG 3 cut(s) 302, 761, 946
SnaBI TACGTA 1 cut(s) 816
Sse9I AATT 5 cut(s) 249, 646, 991, 1132, 1208
SsiI CCGC 8 cut(s) 71, 85, 218, 234, 244, 381, 447, 1099
SspMI CTAG 2 cut(s) 668, 1151
StyD4I CCNGG 4 cut(s) 238, 546, 715, 908
StyI CCWWGG 3 cut(s) 280, 659, 1029
TaaI ACNGT 4 cut(s) 791, 923, 1076, 1216
TaiI ACGT 4 cut(s) 513, 748, 818, 1110
TaqI TCGA 3 cut(s) 568, 947, 1221
TasI AATT 5 cut(s) 249, 646, 991, 1132, 1208
TatI WGTACW 1 cut(s) 942
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 3 cut(s) 98, 472, 664
Tru1I TTAA 6 cut(s) 162, 191, 710, 762, 768, 981
Tru9I TTAA 6 cut(s) 162, 191, 710, 762, 768, 981
TscAI CASTG 5 cut(s) 21, 214, 928, 1126, 1210
TseFI GTSAC 2 cut(s) 12, 785
TseI GCWGC 4 cut(s) 58, 174, 213, 1089
Tsp45I GTSAC 2 cut(s) 12, 785
TspDTI ATGAA 4 cut(s) 260, 405, 635, 848
TspRI CASTG 5 cut(s) 21, 214, 928, 1126, 1210
Tth111I GACNNNGTC 1 cut(s) 776
Vha464I CTTAAG 1 cut(s) 761
VneI GTGCAC 1 cut(s) 297
VpaK11BI GGWCC 1 cut(s) 722
XbaI TCTAGA 1 cut(s) 1150
XceI RCATGY 1 cut(s) 812
XcmI CCANNNNNNNNNTGG 1 cut(s) 1036
XhoI CTCGAG 1 cut(s) 946
XspI CTAG 2 cut(s) 668, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.