pycom11g15780
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
16742945 .. 16745356
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g15780.2

Sequence Viewer

Length: 1842 bp
ATGCTGACTGCTCAAGGAGTAATGCAGACAATCTGTTTGAGTTCGATGCTATTGTTGTTGGTACTAGCAGTAACTTCATCGGGAGGAGGAGGACAGTCAGATTTGGGAGCACTCTTAGACCTCCGGAAAGGCATTCACAAGGACCCTTCGGGGAAACTTCTTGTTTCGTGGGATTCTAACTCCTTGGACTCTGATGGATGCCCCTTGAATTGGTTTGGGGTAACATGTAGTAATGGTCGCGTCATCTCAATTGCTATCAATGATGTTGGTTTGGTCGGTGACTTCAGTTTTTCAGCCATTACTGGCCTTACAATGCTTCAAAACTTGTCGCTTTCAAACAACCAGCTCACAGGGACCATCTCAAAGGTTGCTTTATTTCAGTCTCTTGAATACTTGGATCTCTCAAGCAATTTGTTTCATGGGCTATTACCCTCCGATTTGGTCAACTTAAAGGGTCTAGTGCTTTTGAATCTTTCTTCGAACCAATTTGAAGGCATTTTGCCCTCTGGTTTTGGCAAACTTGAACAGTTGAAGTTTATTGATTTTCGAGCTAATGGCTTTTCTGGAGACATTATGAATTTTCTATCCAAAATGGGTAGCGTGGTCCATCTTGATGTAAGCAGCAATCTGTTATCTGGTTCATTAGATTTGGGACTTGGTAACTCCTCTTTTGTTTCTTCTATTCAGTACTTGAACGTTAGCCACAATTACTTGGTTGGAGAGCTTTTTCCTCACGATGGAATGCCATATTTTGATAGTTTGGAGGTGTTTGATGCTAGTTATAATCAGTTAGTGGGTCCTATACCTTCCTTCAATTTTGTTGTCTCTCTACGAGTACTTCGGCTTGGAAACAACCAGCTATCAGGTTCTCTACCGGAAGCTCTATTGCAAGAGAGCTCAATGCTCTTGTCAGAACTGGATCTTAGTCATAACAAACTTGAAGGTCCGGTAGGAAGCATCACCTCTGCAACTCTGAAGAAGTTTAATATTTCTTCAAACAAACTGTCAGGCTCCTTACCTGCCATGGTTGGGCATTGTTCTGTCATAGATCTGAGTAATAATATGCTCACAGGTAACTTGTCCCGAATCCGAGGTTGGGGAAATTACATTGAAGTTATCGAGCTAAGTTCCAATTCATTGACAGGAAGTCTGCCTAATGAAACGTCTCAATTTTTTAGGCTAACTTCATTTAAGATATCCAAGAACTCATTAGAAGGCATTCTTCCGACAGTATTGGGAACATACCCAGAATTAAATGTGATTGATCTTAGCCTCAACCACCTACAAGGCTTACTTCTTCCAAGCCTCTTCTCTTCAACAAAATTGACTGATCTTAACTTATCGGGCAACAATCTGTCTGGGTCAATACCCATCCAGGACATATCAAGTGATTCTTCAAGTGGTTCGGCTCAAAATTTGAGCCTGGTGTCTATAGATCTGTCAAACAACTCATTGGCTGGTCATTTGCCCCCAGAGATCAGTAAGTTCCGTAACTTAATGTATCTCGATCTATCTATTAACAACTTTGAAGGTAGCATTCCTGAGGACCTTCCAGATGTCCTGAAAGAGTTCAATGTTTCTTTCAATCATCTTTCTGGCATCATACCTGAAAACTTGCGGCAGTTCCCTGATTCCGCATTTTATCCAGGGAACTCATTGCTGATTTTTCCTCGTTCCGCATCTTCACCGAAGGATGTCCCAAACATGACTTTTAGGGAACACAGGCCCCTTATGAAAGCAGCTATTAGGATCTCCCTCATTGCAGGTTTGGTTGGTGGAGCTGTTGTTTTAGTTCTTTTATGCCTTATCGATCCATTACAGGTCCCACTGGCAGAGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

614

Amino Acids

65.79

Weight (kDa)

4.98

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc36I ACCTGC 2 cut(s) 1027, 1754
AccII CGCG 1 cut(s) 240
AccIII TCCGGA 1 cut(s) 123
AciI CCGC 3 cut(s) 1618, 1635, 1677
AclI AACGTT 1 cut(s) 696
AclWI GGATC 4 cut(s) 405, 927, 1757, 1805
AcsI RAATTY 2 cut(s) 577, 1414
AcuI CTGAAG 2 cut(s) 268, 995
AfaI GTAC 3 cut(s) 63, 689, 837
AfiI CCNNNNNNNGG 4 cut(s) 210, 737, 1029, 1096
AflIII ACRYGT 1 cut(s) 224
AhdI GACNNNNNGTC 1 cut(s) 1146
AjnI CCWGG 3 cut(s) 1374, 1422, 1645
AjuI GAANNNNNNNTTGG 2 cut(s) 1078, 1110
AluBI AGCT 9 cut(s) 346, 551, 724, 859, 881, 897, 1123, 1742, 1781
AluI AGCT 9 cut(s) 346, 551, 724, 859, 881, 897, 1123, 1742, 1781
Alw21I GWGCWC 2 cut(s) 112, 899
Alw26I GTCTC 4 cut(s) 387, 561, 829, 1170
AlwI GGATC 4 cut(s) 405, 927, 1757, 1805
Aor13HI TCCGGA 1 cut(s) 123
AoxI GGCC 2 cut(s) 304, 1724
ApeKI GCWGC 2 cut(s) 621, 1739
ApoI RAATTY 2 cut(s) 577, 1414
ArsI GACNNNNNNTTYG 4 cut(s) 19, 51, 989, 1021
Asp700I GAANNNNTTC 2 cut(s) 1218, 1568
AspS9I GGNCC 8 cut(s) 142, 354, 604, 797, 944, 1546, 1725, 1822
AsuHPI GGTGA 3 cut(s) 290, 952, 1677
AsuII TTCGAA 1 cut(s) 479
AvaII GGWCC 7 cut(s) 142, 354, 604, 797, 944, 1546, 1822
AxyI CCTNAGG 1 cut(s) 1542
BanII GRGCYC 1 cut(s) 899
Bbv12I GWGCWC 2 cut(s) 112, 899
BbvI GCAGC 2 cut(s) 633, 1751
BccI CCATC 5 cut(s) 188, 365, 615, 731, 1379
BciT130I CCWGG 3 cut(s) 1376, 1424, 1647
BcoDI GTCTC 4 cut(s) 387, 561, 829, 1170
BfaI CTAG 3 cut(s) 65, 458, 777
BfmI CTRYAG 1 cut(s) 1431
BfuAI ACCTGC 2 cut(s) 1027, 1754
BglII AGATCT 2 cut(s) 1048, 1435
BisI GCNGC 3 cut(s) 622, 1619, 1740
BlsI GCNGC 3 cut(s) 623, 1620, 1741
BmcAI AGTACT 2 cut(s) 689, 837
Bme1390I CCNGG 3 cut(s) 1376, 1424, 1647
Bme18I GGWCC 7 cut(s) 142, 354, 604, 797, 944, 1546, 1822
BmeRI GACNNNNNGTC 1 cut(s) 1146
BmgT120I GGNCC 8 cut(s) 142, 354, 604, 797, 944, 1546, 1725, 1822
BmiI GGNNCC 6 cut(s) 144, 355, 798, 1012, 1727, 1824
BmrFI CCNGG 3 cut(s) 1376, 1424, 1647
BmsI GCATC 6 cut(s) 36, 188, 763, 966, 1608, 1688
BpmI CTGGAG 1 cut(s) 585
Bpu14I TTCGAA 1 cut(s) 479
BpuEI CTTGAG 1 cut(s) 388
Bsa29I ATCGAT 1 cut(s) 1809
BsaJI CCNNGG 4 cut(s) 183, 1023, 1090, 1646
BsaWI WCCGGW 3 cut(s) 123, 874, 946
BsaXI ACNNNNNCTCC 2 cut(s) 1770, 1800
Bsc4I CCNNNNNNNGG 4 cut(s) 210, 737, 1029, 1096
Bse1I ACTGG 3 cut(s) 307, 921, 1833
Bse21I CCTNAGG 1 cut(s) 1542
Bse3DI GCAATG 2 cut(s) 1655, 1758
BseAI TCCGGA 1 cut(s) 123
BseBI CCWGG 3 cut(s) 1376, 1424, 1647
BseCI ATCGAT 1 cut(s) 1809
BseDI CCNNGG 4 cut(s) 183, 1023, 1090, 1646
BseGI GGATG 3 cut(s) 203, 1371, 1699
BseLI CCNNNNNNNGG 4 cut(s) 210, 737, 1029, 1096
BseMI GCAATG 2 cut(s) 1655, 1758
BseMII CTCAG 2 cut(s) 1043, 1533
BseNI ACTGG 3 cut(s) 307, 921, 1833
BseRI GAGGAG 3 cut(s) 99, 102, 655
BseXI GCAGC 2 cut(s) 633, 1751
Bsh1236I CGCG 1 cut(s) 240
BshFI GGCC 2 cut(s) 306, 1726
BshVI ATCGAT 1 cut(s) 1809
BsiHKAI GWGCWC 2 cut(s) 112, 899
BsiSI CCGG 3 cut(s) 124, 875, 947
BslFI GGGAC 5 cut(s) 367, 666, 1066, 1682, 1808
BslI CCNNNNNNNGG 4 cut(s) 210, 737, 1029, 1096
BsmAI GTCTC 4 cut(s) 387, 561, 829, 1170
BsmBI CGTCTC 1 cut(s) 1170
BsmFI GGGAC 5 cut(s) 367, 666, 1066, 1682, 1808
BsmI GAATGC 4 cut(s) 132, 747, 1218, 1536
BsnI GGCC 2 cut(s) 306, 1726
Bsp119I TTCGAA 1 cut(s) 479
Bsp1286I GDGCHC 2 cut(s) 112, 899
Bsp13I TCCGGA 1 cut(s) 123
Bsp19I CCATGG 1 cut(s) 1023
BspACI CCGC 3 cut(s) 1618, 1635, 1677
BspANI GGCC 2 cut(s) 306, 1726
BspCNI CTCAG 2 cut(s) 1044, 1534
BspDI ATCGAT 1 cut(s) 1809
BspEI TCCGGA 1 cut(s) 123
BspFNI CGCG 1 cut(s) 240
BspLI GGNNCC 6 cut(s) 144, 355, 798, 1012, 1727, 1824
BspMI ACCTGC 2 cut(s) 1027, 1754
BspPI GGATC 4 cut(s) 405, 927, 1757, 1805
BspT104I TTCGAA 1 cut(s) 479
BsrDI GCAATG 2 cut(s) 1655, 1758
BsrI ACTGG 3 cut(s) 307, 921, 1833
BssECI CCNNGG 4 cut(s) 183, 1023, 1090, 1646
BssT1I CCWWGG 2 cut(s) 183, 1023
Bst2UI CCWGG 3 cut(s) 1376, 1424, 1647
Bst4CI ACNGT 4 cut(s) 96, 528, 1005, 1231
Bst6I CTCTTC 2 cut(s) 1313, 1318
BstBI TTCGAA 1 cut(s) 479
BstDEI CTNAG 6 cut(s) 115, 923, 1052, 1124, 1268, 1542
BstDSI CCRYGG 1 cut(s) 1023
BstF5I GGATG 3 cut(s) 203, 1371, 1699
BstFNI CGCG 1 cut(s) 240
BstMAI GTCTC 4 cut(s) 387, 561, 829, 1170
BstNI CCWGG 3 cut(s) 1376, 1424, 1647
BstNSI RCATGY 1 cut(s) 228
BstSCI CCNGG 3 cut(s) 1374, 1422, 1645
BstSFI CTRYAG 1 cut(s) 1431
BstUI CGCG 1 cut(s) 240
BstV1I GCAGC 2 cut(s) 633, 1751
BstX2I RGATCY 5 cut(s) 397, 919, 1048, 1435, 1749
BstYI RGATCY 5 cut(s) 397, 919, 1048, 1435, 1749
Bsu15I ATCGAT 1 cut(s) 1809
Bsu36I CCTNAGG 1 cut(s) 1542
BsuRI GGCC 2 cut(s) 306, 1726
BsuTUI ATCGAT 1 cut(s) 1809
BtgI CCRYGG 1 cut(s) 1023
BtsCI GGATG 3 cut(s) 203, 1371, 1699
BtsIMutI CAGTG 1 cut(s) 1826
BveI ACCTGC 2 cut(s) 1027, 1754
Cfr13I GGNCC 8 cut(s) 142, 354, 604, 797, 944, 1546, 1725, 1822
ClaI ATCGAT 1 cut(s) 1809
CseI GACGC 1 cut(s) 229
Csp6I GTAC 3 cut(s) 62, 688, 836
CviAII CATG 4 cut(s) 225, 419, 1024, 1705
CviQI GTAC 3 cut(s) 62, 688, 836
DdeI CTNAG 6 cut(s) 115, 923, 1052, 1124, 1268, 1542
DriI GACNNNNNGTC 1 cut(s) 1146
Eam1104I CTCTTC 2 cut(s) 1313, 1318
Eam1105I GACNNNNNGTC 1 cut(s) 1146
EarI CTCTTC 2 cut(s) 1313, 1318
Ecl136II GAGCTC 1 cut(s) 897
Eco130I CCWWGG 2 cut(s) 183, 1023
Eco24I GRGCYC 1 cut(s) 899
Eco32I GATATC 1 cut(s) 1197
Eco47I GGWCC 7 cut(s) 142, 354, 604, 797, 944, 1546, 1822
Eco53kI GAGCTC 1 cut(s) 897
Eco57I CTGAAG 2 cut(s) 268, 995
Eco81I CCTNAGG 1 cut(s) 1542
EcoICRI GAGCTC 1 cut(s) 897
EcoO109I RGGNCCY 5 cut(s) 142, 797, 1546, 1725, 1822
EcoRII CCWGG 3 cut(s) 1374, 1422, 1645
EcoRV GATATC 1 cut(s) 1197
EcoT14I CCWWGG 2 cut(s) 183, 1023
EcoT38I GRGCYC 1 cut(s) 899
ErhI CCWWGG 2 cut(s) 183, 1023
Esp3I CGTCTC 1 cut(s) 1170
FaeI CATG 4 cut(s) 228, 422, 1027, 1708
FalI AAGNNNNNCTT 6 cut(s) 1206, 1238, 1278, 1310, 1378, 1410
FaqI GGGAC 5 cut(s) 367, 666, 1066, 1682, 1808
FatI CATG 4 cut(s) 224, 418, 1023, 1704
Fnu4HI GCNGC 3 cut(s) 622, 1619, 1740
FokI GGATG 3 cut(s) 210, 1358, 1706
FriOI GRGCYC 1 cut(s) 899
Fsp4HI GCNGC 3 cut(s) 622, 1619, 1740
FspBI CTAG 3 cut(s) 65, 458, 777
GluI GCNGC 3 cut(s) 622, 1619, 1740
GsuI CTGGAG 1 cut(s) 585
HaeIII GGCC 2 cut(s) 306, 1726
HapII CCGG 3 cut(s) 124, 875, 947
HgaI GACGC 1 cut(s) 229
Hin1II CATG 4 cut(s) 228, 422, 1027, 1708
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HinfI GANTC 6 cut(s) 173, 188, 469, 1086, 1391, 1631
HpaII CCGG 3 cut(s) 124, 875, 947
HphI GGTGA 3 cut(s) 290, 952, 1677
Hpy166II GTNNAC 1 cut(s) 445
Hpy188I TCNGA 8 cut(s) 100, 193, 436, 913, 975, 1053, 1091, 1227
Hpy8I GTNNAC 1 cut(s) 445
HpyAV CCTTC 9 cut(s) 156, 485, 816, 820, 935, 1208, 1523, 1559, 1684
HpyCH4III ACNGT 4 cut(s) 96, 528, 1005, 1231
HpyCH4IV ACGT 2 cut(s) 696, 1163
HpyCH4V TGCA 4 cut(s) 25, 889, 968, 1763
HpyF3I CTNAG 6 cut(s) 115, 923, 1052, 1124, 1268, 1542
HpySE526I ACGT 2 cut(s) 696, 1163
Hsp92II CATG 4 cut(s) 228, 422, 1027, 1708
Kpn2I TCCGGA 1 cut(s) 123
LmnI GCTCC 3 cut(s) 107, 1016, 1778
Lsp1109I GCAGC 2 cut(s) 633, 1751
LweI GCATC 6 cut(s) 36, 188, 763, 966, 1608, 1688
MaeI CTAG 3 cut(s) 65, 458, 777
MaeII ACGT 2 cut(s) 696, 1163
MaeIII GTNAC 6 cut(s) 70, 220, 278, 659, 1073, 1490
MfeI CAATTG 1 cut(s) 249
MflI RGATCY 5 cut(s) 397, 919, 1048, 1435, 1749
MhlI GDGCHC 2 cut(s) 112, 899
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 2 cut(s) 697, 1250
MroI TCCGGA 1 cut(s) 123
MroXI GAANNNNTTC 2 cut(s) 1218, 1568
MseI TTAA 7 cut(s) 449, 984, 1191, 1253, 1335, 1496, 1518
MslI CAYNNNNRTG 1 cut(s) 612
MspI CCGG 3 cut(s) 124, 875, 947
MspR9I CCNGG 3 cut(s) 1376, 1424, 1647
MunI CAATTG 1 cut(s) 249
Mva1269I GAATGC 4 cut(s) 132, 747, 1218, 1536
MvaI CCWGG 3 cut(s) 1376, 1424, 1647
MvnI CGCG 1 cut(s) 240
NcoI CCATGG 1 cut(s) 1023
NlaIII CATG 4 cut(s) 228, 422, 1027, 1708
NlaIV GGNNCC 6 cut(s) 144, 355, 798, 1012, 1727, 1824
NmuCI GTSAC 1 cut(s) 278
NspI RCATGY 1 cut(s) 228
NspV TTCGAA 1 cut(s) 479
PciI ACATGT 1 cut(s) 224
PctI GAATGC 4 cut(s) 132, 747, 1218, 1536
PdmI GAANNNNTTC 2 cut(s) 1218, 1568
PfeI GAWTC 5 cut(s) 173, 469, 1086, 1391, 1631
PfoI TCCNGGA 1 cut(s) 1374
PkrI GCNGC 3 cut(s) 623, 1620, 1741
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
PpuMI RGGWCCY 4 cut(s) 142, 797, 1546, 1822
PscI ACATGT 1 cut(s) 224
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 899
Psp1406I AACGTT 1 cut(s) 696
Psp5II RGGWCCY 4 cut(s) 142, 797, 1546, 1822
Psp6I CCWGG 3 cut(s) 1374, 1422, 1645
PspGI CCWGG 3 cut(s) 1374, 1422, 1645
PspN4I GGNNCC 6 cut(s) 144, 355, 798, 1012, 1727, 1824
PspPI GGNCC 8 cut(s) 142, 354, 604, 797, 944, 1546, 1725, 1822
PspPPI RGGWCCY 4 cut(s) 142, 797, 1546, 1822
PsuI RGATCY 5 cut(s) 397, 919, 1048, 1435, 1749
RsaI GTAC 3 cut(s) 63, 689, 837
RsaNI GTAC 3 cut(s) 62, 688, 836
RseI CAYNNNNRTG 1 cut(s) 612
SacI GAGCTC 1 cut(s) 899
SaqAI TTAA 7 cut(s) 449, 984, 1191, 1253, 1335, 1496, 1518
SatI GCNGC 3 cut(s) 622, 1619, 1740
Sau96I GGNCC 8 cut(s) 142, 354, 604, 797, 944, 1546, 1725, 1822
ScaI AGTACT 2 cut(s) 689, 837
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 3 cut(s) 1376, 1424, 1647
SduI GDGCHC 2 cut(s) 112, 899
SfaNI GCATC 6 cut(s) 36, 188, 763, 966, 1608, 1688
SfcI CTRYAG 1 cut(s) 1431
SfuI TTCGAA 1 cut(s) 479
SinI GGWCC 7 cut(s) 142, 354, 604, 797, 944, 1546, 1822
SmiMI CAYNNNNRTG 1 cut(s) 612
SmlI CTYRAG 2 cut(s) 12, 403
SmoI CTYRAG 2 cut(s) 12, 403
SsiI CCGC 3 cut(s) 1618, 1635, 1677
SspI AATATT 1 cut(s) 988
SspMI CTAG 3 cut(s) 65, 458, 777
SstI GAGCTC 1 cut(s) 899
StyD4I CCNGG 3 cut(s) 1374, 1422, 1645
StyI CCWWGG 2 cut(s) 183, 1023
TaaI ACNGT 4 cut(s) 96, 528, 1005, 1231
TaiI ACGT 2 cut(s) 699, 1166
TaqI TCGA 6 cut(s) 44, 479, 547, 1119, 1506, 1809
TatI WGTACW 2 cut(s) 687, 835
TauI GCSGC 1 cut(s) 1621
TfiI GAWTC 5 cut(s) 173, 469, 1086, 1391, 1631
Tru1I TTAA 7 cut(s) 449, 984, 1191, 1253, 1335, 1496, 1518
Tru9I TTAA 7 cut(s) 449, 984, 1191, 1253, 1335, 1496, 1518
TscAI CASTG 1 cut(s) 1833
TseFI GTSAC 1 cut(s) 278
TseI GCWGC 2 cut(s) 621, 1739
Tsp45I GTSAC 1 cut(s) 278
TspDTI ATGAA 8 cut(s) 66, 407, 590, 630, 1125, 1173, 1176, 1748
TspGWI ACGGA 1 cut(s) 1478
TspRI CASTG 1 cut(s) 1833
VpaK11BI GGWCC 7 cut(s) 142, 354, 604, 797, 944, 1546, 1822
XapI RAATTY 2 cut(s) 577, 1414
XceI RCATGY 1 cut(s) 228
XmnI GAANNNNTTC 2 cut(s) 1218, 1568
XspI CTAG 3 cut(s) 65, 458, 777
ZrmI AGTACT 2 cut(s) 689, 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.