RchiOBHm_Chr5g0049971
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0006137
Physical Location & Seq
Forward (+)
48287483 .. 48293629
6147 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32760

Sequence Viewer

Length: 3057 bp
ATGCAGACAATATGCTTCATGTTCATGTTGTTGTTGTTGGTAGTAATTGCAGCATCAGGGCAGTCGGATTTAGATGCACTCTTAGAGCTCAAAAAAGGGATTCAGAAAGACCCTTCTGGCCAAGTTCTTGTTTCATGGGATTCAAAGTCCTTGGCCTCTGATGGATGCCCCCTCAATTGGTTTGGGATAGTTTGTAGTGATGGCCTTGTCACTTCCATTTCTATAAACGATATTGGCCTGGTTGGCGAGTTCAGCTTTTCGGCCATTTCTGGCCTTGGAGTGCTGCGCAATTTATCACTCTCAAACAACCAGCTCACAGGGGCTATCTCAAAGGTCGCTCTGATTCAGTCTCTAGAGCATTTAGATCTCTCACGCAATTTGTTTCATGGGTTAATACCATCTGGCTTAGCAGACTTAAAGCATTTAGCGCTTTTGAATCTGTCTTCAAACCAATTTGAAGGCATTTTCCCCTCTGGTTTTGGGAAACTTGAACAGCTGAGGTACATTGATGTTCGAGATAATGCCTTGTCTGGGGATATCATGACTTTTCTATCCCAAATGGGTAGCGTGGTTCATGTTGATCTAAGTAGCAATCTGTTTTCTGGTTCACTGGATTTGGAAATTGGTAACTCCTCTTTTGTTTCTTCTGTTCAATATTTGAATGTAAGTCACAATTCCTTGGCTGGAGAGCTTTTTCCTCACGATGGAATGCCATATTTTGATAGTTTGGAGGTGTTTGATGCTAGTGATAATCAGTTAGTTGGTCCTATACCTTCCTTCAATTTTGTTGTCTCTCTTCGGATACTTCGGCTCGGAAGCAACCAGCTATCAGGTTCTCTACCGGAAGCTCTGTTGCAAGGAAGCTCAATGCTCTTGTCTGAATTGGATCTTAGTCTTAATCATCTTGAAGGTCCAGTAGGAAGCATAACCTCTGCAACTCTGAAGAAGCTGAATATATCTTCAAATAAATTATCAGGGTCCTTGCCTGCCAATGTTGGCCACTGTGCCATCGTAGACCTTAGTAATAATATGCTCACTGGTAACCTGTCCCGAATCCGTAGTTGGGGAAATTACATTGAAGTTATCCAACTAAGTTCAAATTCTTTGACAGGAAGCTTGCCTGGCCAAACATCCCAATTTTTGAGGCTAACTTCTTTTAAGATATCCAATAACTCATTAGAGGGTGTTCTTCCATCAGTATTGGGTACATACCCAGAACTAAAAGTGATAGATCTTAGCCTCAACCGGTTGCAAGGTTTTCTCCTTCCAAGCTTTTTCTCTTCAACAATATTGACTGATCTAAACTTGTCAGGCAACAATTTCTCTGGGTCCATACCTGTCCAGGAAATTACAATTGGTTCTACTCAAAATTTGAGCCTGGTGTCTCTAGATCTGTCAAATAATTCATTGAGTGGTCATTTGCCCCAAGAATTCAGCAAGTTTCATAGCTTGGTATATCTCAACCTGTCTGGTAATAATTTTGAAGGTAGGATTCCTGAGAACCTTCCAGATGAACTGAAAGAATTCAACGTCTCTTTGAATAATCTTTCTGGTCTTGTACCTGAAAATTTAAGGCACTTCCCTGATTCAGCATTTTATCCAGGGAATTCTTTGCTGATGTTTCCTCATCCCCTATCATCACCAAACAATGTCCCAGATATGATCTCTAGAAATCACAGGTCTCCTATAAAAGCTGCTATTAGAATTGCCCTGATTGTAGGTTTGCTTGGTGGTGGTGCTATTGTAGCCCTCTCATGCATGATGATCTATTATAGGGCCCACTGTCAAGGATGTAGAAAGAGAGGTCAAAAAGCAAGCTGTGAAAAGAATGGTGTTGTGCAAGGGGACTCTTCCCTTTGTCATAGATCAGTACCTGGCAAAACTGAAGACTTAAAATCTTCATATGGTTTCCTTCAAGACCCTTCACCATCATCTGCAACAAGGGAGTCTACTCATAATGCCGGTGACACTTCATCAGTTCTAGAGAAGTCTAAACAATTGGGTCATCCTGAATCAACAAAGCTAGAGGAAGGGGTATCTTCTCCTATGTCTCTCTTATTGCCTTCAAACCCATTGCCTTCGAAAAGCCAACAACCACTCAATAGTTCTGCTGTTCTCAACACTTGTTCTCCAGATAAACTAGCTGGTGATTTGCATCTGTTTGATGGCTCCCTGGCATTCACAGCAGAAGATCTTTCATGTGCTCCCGCAGAAGCTATTGGAAGGAGTTGTCATGGAACAATGTACAAAGCAATGCTCGAGTCTGGTCATGTAATTGCTGTCAAATGGTTAAGGGAGGGAATAGCAAAAGGAAGGAAAGAATTTGCTAGAGAAGTAAAGAAACTTGGGAGCATCCGCCATCCAAATCTGGTTTCTTTGCAGGGTTACTATTGGGGCCCAAAGGAGCATGAGAAACTTATTATATCAAATTATATCAATGGTGAATCTTTGGCCTTCTATCTCCATGATGTTGAGCCAAGAAAACTCTCACCCTTGTCTCTCGAGGAACGGCTCAAGGTTTCTGTAGATGTTGCCCGATGTCTGAACTACCTCCATAATGAGAAGGCAATTCCCCATGGCAACCTCAAATCCACAAATATTCTACTAGAAACTCCTAATCATAATGCACTCCTTACAGATTATAGTATCCACCGAATATTGACTCCTGCTGGAACGACTGAGCAAGTTCTGAATGCAGGTGCTCTTGGCTATCGGCCCCCTGAATTTGCTAGTTCAAGTAGACCCTGCCCCTCATTGAAGAGTGATGTCTATGCATTTGGAGTGATCTTGTTGGAGCTCCTGACTGGAAAGAGTTCTGGGGAGATTGTCTCTGGCATACCAGGTGTGGTTGATCTGACTGATTGGGTGAGATTTTTGGCAGAAGAAAATCGTTCTTTTGAATGCCTTGACAGACTGATTCTGGAAAAGCACAGTATTAAGCACTCGCCTAGAGTTCTTGATGAATTGCTCCAGGTAGCTTTAAGATGTATCCTTCCAGCATCCGAGAGACCCGACATTAAAACTGTGTTTGAAGACCTTTCAAGAATAGTGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

1018

Amino Acids

110.41

Weight (kDa)

5.95

Isoelectric Point (pI)

38.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 22 - 66 5e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 95 - 152 1.6e-06 Leucine rich repeat
LRR_8 PF13855 117 - 176 7.9e-10 Leucine rich repeat
LRR_8 PF13855 141 - 199 2.6e-06 Leucine rich repeat
LRR_8 PF13855 382 - 441 1.7e-06 Leucine rich repeat
LRR_8 PF13855 458 - 494 8.7e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 738 - 1012 5.4e-27 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 738 - 938 1.1e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2687
Acc16I TGCGCA 1 cut(s) 287
Acc36I ACCTGC 1 cut(s) 2687
AccI GTMKAC 3 cut(s) 1014, 1949, 2740
AciI CCGC 2 cut(s) 2208, 2356
AclWI GGATC 1 cut(s) 894
AcoI YGGCCR 4 cut(s) 118, 261, 997, 1123
AcsI RAATTY 8 cut(s) 1099, 1369, 1430, 1523, 1567, 1606, 2321, 2723
AcuI CTGAAG 2 cut(s) 962, 1905
AfaI GTAC 6 cut(s) 503, 1207, 1560, 1872, 2246, 3053
AfeI AGCGCT 1 cut(s) 429
AfiI CCNNNNNNNGG 4 cut(s) 177, 531, 704, 1063
AgeI ACCGGT 1 cut(s) 1245
AjnI CCWGG 9 cut(s) 237, 1120, 1341, 1377, 1600, 1873, 2172, 2839, 2970
AjuI GAANNNNNNNTTGG 6 cut(s) 1045, 1077, 1338, 1370, 2356, 2388
Alw21I GWGCWC 4 cut(s) 90, 2206, 2704, 2799
Alw26I GTCTC 9 cut(s) 354, 796, 1389, 1537, 1686, 2055, 2502, 2833, 3001
AlwI GGATC 1 cut(s) 894
AlwNI CAGNNNCTG 1 cut(s) 1874
Ama87I CYCGRG 2 cut(s) 2258, 2501
Aor51HI AGCGCT 1 cut(s) 429
ApaI GGGCCC 2 cut(s) 1780, 2399
ApeKI GCWGC 3 cut(s) 50, 283, 1694
ApoI RAATTY 8 cut(s) 1099, 1369, 1430, 1523, 1567, 1606, 2321, 2723
AsiGI ACCGGT 1 cut(s) 1245
Asp700I GAANNNNTTC 2 cut(s) 1523, 2812
AspLEI GCGC 2 cut(s) 288, 430
AspS9I GGNCC 9 cut(s) 764, 911, 978, 1329, 1776, 1777, 2395, 2396, 2715
AsuHPI GGTGA 7 cut(s) 1632, 1917, 1976, 2159, 2453, 2481, 2878
AsuII TTCGAA 1 cut(s) 2081
AvaI CYCGRG 2 cut(s) 2258, 2501
AvaII GGWCC 4 cut(s) 764, 911, 978, 1329
BaeGI GKGCMC 2 cut(s) 1780, 2399
BalI TGGCCA 3 cut(s) 120, 999, 1125
BanII GRGCYC 4 cut(s) 90, 1780, 2399, 2799
BbsI GAAGAC 3 cut(s) 435, 1893, 3039
Bbv12I GWGCWC 4 cut(s) 90, 2206, 2704, 2799
BbvCI CCTCAGC 1 cut(s) 497
BbvI GCAGC 3 cut(s) 62, 270, 1681
BccI CCATC 9 cut(s) 155, 194, 406, 698, 1016, 1201, 1936, 2159, 2367
BceAI ACGGC 1 cut(s) 2525
BciT130I CCWGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
BciVI GTATCC 3 cut(s) 795, 2657, 2999
BcoDI GTCTC 9 cut(s) 354, 796, 1389, 1537, 1686, 2055, 2502, 2833, 3001
BfmI CTRYAG 1 cut(s) 2523
BfoI RGCGCY 1 cut(s) 431
BfuAI ACCTGC 1 cut(s) 2687
BfuI GTATCC 3 cut(s) 795, 2657, 2999
BglI GCCNNNNNGGC 1 cut(s) 243
BglII AGATCT 4 cut(s) 364, 1231, 1390, 2191
BisI GCNGC 3 cut(s) 51, 284, 1695
BlpI GCTNAGC 1 cut(s) 406
BlsI GCNGC 3 cut(s) 52, 285, 1696
Bme1390I CCNGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
Bme18I GGWCC 4 cut(s) 764, 911, 978, 1329
BmeT110I CYCGRG 2 cut(s) 2258, 2501
BmgT120I GGNCC 9 cut(s) 764, 911, 978, 1329, 1776, 1777, 2395, 2396, 2715
BmiI GGNNCC 7 cut(s) 979, 1330, 1778, 2170, 2396, 2397, 2717
BmrFI CCNGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
BmsI GCATC 7 cut(s) 62, 64, 155, 730, 2164, 2361, 3008
BpiI GAAGAC 3 cut(s) 435, 1893, 3039
BplI GAGNNNNNCTC 2 cut(s) 2813, 2845
BpmI CTGGAG 3 cut(s) 705, 2115, 2954
Bpu10I CCTNAGC 1 cut(s) 497
Bpu1102I GCTNAGC 1 cut(s) 406
Bpu14I TTCGAA 1 cut(s) 2081
BpuEI CTTGAG 1 cut(s) 2498
BsaBI GATNNNNATC 1 cut(s) 2154
BsaI GGTCTC 2 cut(s) 1686, 3001
BsaJI CCNNGG 6 cut(s) 150, 274, 678, 1601, 2172, 2575
BsaWI WCCGGW 2 cut(s) 841, 1245
BsaXI ACNNNNNCTCC 2 cut(s) 2113, 2143
Bsc4I CCNNNNNNNGG 4 cut(s) 177, 531, 704, 1063
Bse118I RCCGGY 2 cut(s) 1245, 1961
Bse1I ACTGG 4 cut(s) 615, 914, 1042, 2809
Bse3DI GCAATG 2 cut(s) 2072, 2259
Bse8I GATNNNNATC 1 cut(s) 2154
BseBI CCWGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
BseDI CCNNGG 6 cut(s) 150, 274, 678, 1601, 2172, 2575
BseGI GGATG 8 cut(s) 170, 1130, 1627, 1796, 2005, 2352, 2359, 2999
BseJI GATNNNNATC 1 cut(s) 2154
BseLI CCNNNNNNNGG 4 cut(s) 177, 531, 704, 1063
BseMI GCAATG 2 cut(s) 2072, 2259
BseMII CTCAG 3 cut(s) 488, 1488, 2670
BseNI ACTGG 4 cut(s) 615, 914, 1042, 2809
BseRI GAGGAG 1 cut(s) 622
BseSI GKGCMC 2 cut(s) 1780, 2399
BseXI GCAGC 3 cut(s) 62, 270, 1681
BshTI ACCGGT 1 cut(s) 1245
BsiHKAI GWGCWC 4 cut(s) 90, 2206, 2704, 2799
BsiHKCI CYCGRG 2 cut(s) 2258, 2501
BsiSI CCGG 3 cut(s) 842, 1246, 1962
BslFI GGGAC 3 cut(s) 1033, 1637, 1859
BslI CCNNNNNNNGG 4 cut(s) 177, 531, 704, 1063
BsmAI GTCTC 9 cut(s) 354, 796, 1389, 1537, 1686, 2055, 2502, 2833, 3001
BsmBI CGTCTC 1 cut(s) 1537
BsmFI GGGAC 3 cut(s) 1033, 1637, 1859
BsmI GAATGC 4 cut(s) 714, 2177, 2698, 2906
Bso31I GGTCTC 2 cut(s) 1686, 3001
BsoBI CYCGRG 2 cut(s) 2258, 2501
Bsp119I TTCGAA 1 cut(s) 2081
Bsp120I GGGCCC 2 cut(s) 1776, 2395
Bsp1286I GDGCHC 6 cut(s) 90, 1780, 2206, 2399, 2704, 2799
Bsp1407I TGTACA 1 cut(s) 2244
Bsp1720I GCTNAGC 1 cut(s) 406
Bsp19I CCATGG 1 cut(s) 2575
BspACI CCGC 2 cut(s) 2208, 2356
BspCNI CTCAG 3 cut(s) 489, 1489, 2671
BspHI TCATGA 1 cut(s) 540
BspLI GGNNCC 7 cut(s) 979, 1330, 1778, 2170, 2396, 2397, 2717
BspMI ACCTGC 1 cut(s) 2687
BspPI GGATC 1 cut(s) 894
BspT104I TTCGAA 1 cut(s) 2081
BspTNI GGTCTC 2 cut(s) 1686, 3001
BsrDI GCAATG 2 cut(s) 2072, 2259
BsrFI RCCGGY 2 cut(s) 1245, 1961
BsrGI TGTACA 1 cut(s) 2244
BsrI ACTGG 4 cut(s) 615, 914, 1042, 2809
BssAI RCCGGY 2 cut(s) 1245, 1961
BssECI CCNNGG 6 cut(s) 150, 274, 678, 1601, 2172, 2575
BssT1I CCWWGG 4 cut(s) 150, 274, 678, 2575
Bst2UI CCWGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
Bst4CI ACNGT 4 cut(s) 1004, 1784, 2933, 3025
Bst6I CTCTTC 4 cut(s) 801, 1285, 1855, 2753
BstAUI TGTACA 1 cut(s) 2244
BstBI TTCGAA 1 cut(s) 2081
BstC8I GCNNGC 3 cut(s) 987, 1118, 1816
BstDSI CCRYGG 1 cut(s) 2575
BstEII GGTNACC 1 cut(s) 1040
BstF5I GGATG 8 cut(s) 170, 1130, 1627, 1796, 2005, 2352, 2359, 2999
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 2 cut(s) 288, 430
BstMAI GTCTC 9 cut(s) 354, 796, 1389, 1537, 1686, 2055, 2502, 2833, 3001
BstMWI GCNNNNNNNGC 6 cut(s) 243, 252, 427, 1122, 1745, 2183
BstNI CCWGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
BstPI GGTNACC 1 cut(s) 1040
BstSCI CCNGG 9 cut(s) 237, 1120, 1341, 1377, 1600, 1873, 2172, 2839, 2970
BstSFI CTRYAG 1 cut(s) 2523
BstSLI GKGCMC 2 cut(s) 1780, 2399
BstV1I GCAGC 3 cut(s) 62, 270, 1681
BstV2I GAAGAC 3 cut(s) 435, 1893, 3039
BstX2I RGATCY 5 cut(s) 364, 886, 1231, 1390, 2191
BstYI RGATCY 5 cut(s) 364, 886, 1231, 1390, 2191
BsuI GTATCC 3 cut(s) 795, 2657, 2999
BtgI CCRYGG 1 cut(s) 2575
BtsCI GGATG 8 cut(s) 170, 1130, 1627, 1796, 2005, 2352, 2359, 2999
BtsIMutI CAGTG 4 cut(s) 608, 1000, 1035, 1780
BveI ACCTGC 1 cut(s) 2687
Cac8I GCNNGC 3 cut(s) 987, 1118, 1816
CaiI CAGNNNCTG 1 cut(s) 1874
CciI TCATGA 1 cut(s) 540
CfoI GCGC 2 cut(s) 288, 430
Cfr10I RCCGGY 2 cut(s) 1245, 1961
Cfr13I GGNCC 9 cut(s) 764, 911, 978, 1329, 1776, 1777, 2395, 2396, 2715
CsiI ACCWGGT 1 cut(s) 2839
Csp6I GTAC 6 cut(s) 502, 1206, 1559, 1871, 2245, 3052
CspAI ACCGGT 1 cut(s) 1245
CviQI GTAC 6 cut(s) 502, 1206, 1559, 1871, 2245, 3052
EaeI YGGCCR 4 cut(s) 118, 261, 997, 1123
Eam1104I CTCTTC 4 cut(s) 801, 1285, 1855, 2753
EarI CTCTTC 4 cut(s) 801, 1285, 1855, 2753
EciI GGCGGA 1 cut(s) 2345
Ecl136II GAGCTC 2 cut(s) 88, 2797
Eco130I CCWWGG 4 cut(s) 150, 274, 678, 2575
Eco24I GRGCYC 4 cut(s) 90, 1780, 2399, 2799
Eco31I GGTCTC 2 cut(s) 1686, 3001
Eco32I GATATC 2 cut(s) 538, 1164
Eco47I GGWCC 4 cut(s) 764, 911, 978, 1329
Eco47III AGCGCT 1 cut(s) 429
Eco53kI GAGCTC 2 cut(s) 88, 2797
Eco57I CTGAAG 2 cut(s) 962, 1905
Eco88I CYCGRG 2 cut(s) 2258, 2501
Eco91I GGTNACC 1 cut(s) 1040
EcoICRI GAGCTC 2 cut(s) 88, 2797
EcoO109I RGGNCCY 3 cut(s) 978, 1776, 2395
EcoO65I GGTNACC 1 cut(s) 1040
EcoRI GAATTC 3 cut(s) 1430, 1523, 1606
EcoRII CCWGG 9 cut(s) 237, 1120, 1341, 1377, 1600, 1873, 2172, 2839, 2970
EcoRV GATATC 2 cut(s) 538, 1164
EcoT14I CCWWGG 4 cut(s) 150, 274, 678, 2575
EcoT22I ATGCAT 2 cut(s) 1760, 2776
EcoT38I GRGCYC 4 cut(s) 90, 1780, 2399, 2799
ErhI CCWWGG 4 cut(s) 150, 274, 678, 2575
Esp3I CGTCTC 1 cut(s) 1537
FaqI GGGAC 3 cut(s) 1033, 1637, 1859
FauI CCCGC 1 cut(s) 2215
FauNDI CATATG 1 cut(s) 1903
FblI GTMKAC 3 cut(s) 1014, 1949, 2740
Fnu4HI GCNGC 3 cut(s) 51, 284, 1695
FokI GGATG 8 cut(s) 177, 1117, 1614, 1803, 1992, 2339, 2346, 2986
FriOI GRGCYC 4 cut(s) 90, 1780, 2399, 2799
Fsp4HI GCNGC 3 cut(s) 51, 284, 1695
FspI TGCGCA 1 cut(s) 287
GlaI GCGC 2 cut(s) 287, 429
GluI GCNGC 3 cut(s) 51, 284, 1695
GsuI CTGGAG 3 cut(s) 705, 2115, 2954
HaeII RGCGCY 1 cut(s) 431
HapII CCGG 3 cut(s) 842, 1246, 1962
HhaI GCGC 2 cut(s) 288, 430
Hin6I GCGC 2 cut(s) 286, 428
HinP1I GCGC 2 cut(s) 286, 428
HindIII AAGCTT 2 cut(s) 1114, 1270
HpaII CCGG 3 cut(s) 842, 1246, 1962
HphI GGTGA 7 cut(s) 1632, 1917, 1976, 2159, 2453, 2481, 2878
Hpy166II GTNNAC 5 cut(s) 608, 1015, 1950, 2741, 3052
Hpy8I GTNNAC 5 cut(s) 608, 1015, 1950, 2741, 3052
HpyCH4III ACNGT 4 cut(s) 1004, 1784, 2933, 3025
HpyCH4IV ACGT 1 cut(s) 1530
HpyF10VI GCNNNNNNNGC 6 cut(s) 243, 252, 427, 1122, 1745, 2183
HpySE526I ACGT 1 cut(s) 1530
HspAI GCGC 2 cut(s) 286, 428
LmnI GCTCC 7 cut(s) 2174, 2209, 2349, 2404, 2794, 2802, 2973
Lsp1109I GCAGC 3 cut(s) 62, 270, 1681
LweI GCATC 7 cut(s) 62, 64, 155, 730, 2164, 2361, 3008
MabI ACCWGGT 1 cut(s) 2839
MaeII ACGT 1 cut(s) 1530
MaeIII GTNAC 6 cut(s) 208, 626, 668, 1040, 1964, 2384
MfeI CAATTG 3 cut(s) 175, 1353, 1997
MflI RGATCY 5 cut(s) 364, 886, 1231, 1390, 2191
MhlI GDGCHC 6 cut(s) 90, 1780, 2206, 2399, 2704, 2799
MlsI TGGCCA 3 cut(s) 120, 999, 1125
MluNI TGGCCA 3 cut(s) 120, 999, 1125
MlyI GAGTC 4 cut(s) 1841, 1955, 2270, 2656
MmeI TCCRAC 3 cut(s) 45, 1111, 2772
Mox20I TGGCCA 3 cut(s) 120, 999, 1125
Mph1103I ATGCAT 2 cut(s) 1760, 2776
MroXI GAANNNNTTC 2 cut(s) 1523, 2812
MscI TGGCCA 3 cut(s) 120, 999, 1125
MslI CAYNNNNRTG 1 cut(s) 23
Msp20I TGGCCA 3 cut(s) 120, 999, 1125
MspA1I CMGCKG 1 cut(s) 496
MspI CCGG 3 cut(s) 842, 1246, 1962
MspR9I CCNGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
MunI CAATTG 3 cut(s) 175, 1353, 1997
Mva1269I GAATGC 4 cut(s) 714, 2177, 2698, 2906
MvaI CCWGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
MwoI GCNNNNNNNGC 6 cut(s) 243, 252, 427, 1122, 1745, 2183
NcoI CCATGG 1 cut(s) 2575
NdeI CATATG 1 cut(s) 1903
NlaIV GGNNCC 7 cut(s) 979, 1330, 1778, 2170, 2396, 2397, 2717
NmuCI GTSAC 3 cut(s) 208, 668, 1964
NsbI TGCGCA 1 cut(s) 287
NsiI ATGCAT 2 cut(s) 1760, 2776
NspV TTCGAA 1 cut(s) 2081
PaeR7I CTCGAG 2 cut(s) 2258, 2501
PagI TCATGA 1 cut(s) 540
PaqCI CACCTGC 1 cut(s) 2687
PctI GAATGC 4 cut(s) 714, 2177, 2698, 2906
PdmI GAANNNNTTC 2 cut(s) 1523, 2812
PfoI TCCNGGA 1 cut(s) 1341
PinAI ACCGGT 1 cut(s) 1245
PkrI GCNGC 3 cut(s) 52, 285, 1696
PleI GAGTC 4 cut(s) 1841, 1954, 2269, 2656
PpsI GAGTC 4 cut(s) 1841, 1954, 2269, 2656
PpuMI RGGWCCY 1 cut(s) 978
Psp124BI GAGCTC 2 cut(s) 90, 2799
Psp5II RGGWCCY 1 cut(s) 978
Psp6I CCWGG 9 cut(s) 237, 1120, 1341, 1377, 1600, 1873, 2172, 2839, 2970
PspEI GGTNACC 1 cut(s) 1040
PspGI CCWGG 9 cut(s) 237, 1120, 1341, 1377, 1600, 1873, 2172, 2839, 2970
PspN4I GGNNCC 7 cut(s) 979, 1330, 1778, 2170, 2396, 2397, 2717
PspOMI GGGCCC 2 cut(s) 1776, 2395
PspPI GGNCC 9 cut(s) 764, 911, 978, 1329, 1776, 1777, 2395, 2396, 2715
PspPPI RGGWCCY 1 cut(s) 978
PspXI VCTCGAGB 1 cut(s) 2258
PstNI CAGNNNCTG 1 cut(s) 1874
PsuI RGATCY 5 cut(s) 364, 886, 1231, 1390, 2191
PvuII CAGCTG 1 cut(s) 496
RsaI GTAC 6 cut(s) 503, 1207, 1560, 1872, 2246, 3053
RsaNI GTAC 6 cut(s) 502, 1206, 1559, 1871, 2245, 3052
RseI CAYNNNNRTG 1 cut(s) 23
SacI GAGCTC 2 cut(s) 90, 2799
SatI GCNGC 3 cut(s) 51, 284, 1695
Sau96I GGNCC 9 cut(s) 764, 911, 978, 1329, 1776, 1777, 2395, 2396, 2715
SchI GAGTC 4 cut(s) 1841, 1955, 2270, 2656
ScrFI CCNGG 9 cut(s) 239, 1122, 1343, 1379, 1602, 1875, 2174, 2841, 2972
SduI GDGCHC 6 cut(s) 90, 1780, 2206, 2399, 2704, 2799
SexAI ACCWGGT 1 cut(s) 2839
SfaNI GCATC 7 cut(s) 62, 64, 155, 730, 2164, 2361, 3008
SfcI CTRYAG 1 cut(s) 2523
Sfr274I CTCGAG 2 cut(s) 2258, 2501
SfuI TTCGAA 1 cut(s) 2081
SinI GGWCC 4 cut(s) 764, 911, 978, 1329
SlaI CTCGAG 2 cut(s) 2258, 2501
SmiMI CAYNNNNRTG 1 cut(s) 23
SmlI CTYRAG 3 cut(s) 2258, 2501, 2513
SmoI CTYRAG 3 cut(s) 2258, 2501, 2513
SsiI CCGC 2 cut(s) 2208, 2356
SspI AATATT 4 cut(s) 656, 1290, 2599, 2658
SstI GAGCTC 2 cut(s) 90, 2799
StyD4I CCNGG 9 cut(s) 237, 1120, 1341, 1377, 1600, 1873, 2172, 2839, 2970
StyI CCWWGG 4 cut(s) 150, 274, 678, 2575
TaaI ACNGT 4 cut(s) 1004, 1784, 2933, 3025
TaiI ACGT 1 cut(s) 1533
TaqI TCGA 4 cut(s) 514, 2081, 2259, 2502
TatI WGTACW 2 cut(s) 2244, 3051
TscAI CASTG 4 cut(s) 615, 1007, 1042, 1787
TseFI GTSAC 3 cut(s) 208, 668, 1964
TseI GCWGC 3 cut(s) 50, 283, 1694
Tsp45I GTSAC 3 cut(s) 208, 668, 1964
TspGWI ACGGA 1 cut(s) 1046
TspRI CASTG 4 cut(s) 615, 1007, 1042, 1787
VpaK11BI GGWCC 4 cut(s) 764, 911, 978, 1329
XapI RAATTY 8 cut(s) 1099, 1369, 1430, 1523, 1567, 1606, 2321, 2723
XbaI TCTAGA 4 cut(s) 352, 1387, 1667, 1981
XhoI CTCGAG 2 cut(s) 2258, 2501
XmiI GTMKAC 3 cut(s) 1014, 1949, 2740
XmnI GAANNNNTTC 2 cut(s) 1523, 2812
Zsp2I ATGCAT 2 cut(s) 1760, 2776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.