Rmu_co8319145.1_g000001
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8319145.1
OG0006137
Physical Location & Seq
Reverse (-)
313 .. 936
624 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8319145.1_g000001.1.cds

Sequence Viewer

Length: 624 bp
ctgatttttctgatattgtatgcaacgtttgcagaggttgagccaagaaaactctcacccttgtctctcgaggaacggctcaaggtttctgtagatgttgcccgatgtctgaactacctccataatgagaaggcaattccccatggcaacctcaaatccacaaatattctactagaaactcctaatcataatgcactccttacagattatagtatccaccgaatattgactcctgctggaactactgagcaagttctgaatgcaggtgctcttggctatcggccccctgaatttgctagttcaagtagaccctgcccctcattgaagagtgatgtctatgcatttggagtgatcttgttggagctgctgactggaaagagttctggggagattgtctctggcataccaggtgtggttgatctgactgattgggtgagatttttggcagaagaaaaccgttcttttgaatgccttgacagactgattctggaaaagcccagtattaagcactcgcctagagttcttgatgaattgctccaggtagctttaagatgcatccttccagcatccgagagacccgacattaaaactgtgtttgaagacctttcaagaatagtgtactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

207

Amino Acids

23.08

Weight (kDa)

5.77

Isoelectric Point (pI)

45.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 254
Acc36I ACCTGC 1 cut(s) 254
AccI GTMKAC 1 cut(s) 307
AclI AACGTT 1 cut(s) 26
AcsI RAATTY 1 cut(s) 290
AfaI GTAC 1 cut(s) 620
AgsI TTSAA 5 cut(s) 303, 325, 467, 599, 609
AjnI CCWGG 2 cut(s) 406, 537
AluBI AGCT 2 cut(s) 364, 545
AluI AGCT 2 cut(s) 364, 545
Alw21I GWGCWC 1 cut(s) 271
Alw26I GTCTC 3 cut(s) 69, 400, 568
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 1 cut(s) 281
ApeKI GCWGC 1 cut(s) 364
ApoI RAATTY 1 cut(s) 290
Asp700I GAANNNNTTC 1 cut(s) 379
AspS9I GGNCC 1 cut(s) 282
AsuHPI GGTGA 2 cut(s) 48, 445
AvaI CYCGRG 1 cut(s) 68
BbsI GAAGAC 1 cut(s) 606
Bbv12I GWGCWC 1 cut(s) 271
BbvI GCAGC 1 cut(s) 351
BceAI ACGGC 1 cut(s) 92
BciT130I CCWGG 2 cut(s) 408, 539
BciVI GTATCC 1 cut(s) 224
BcoDI GTCTC 3 cut(s) 69, 400, 568
BfaI CTAG 3 cut(s) 173, 297, 516
BfmI CTRYAG 1 cut(s) 90
BfuAI ACCTGC 1 cut(s) 254
BfuI GTATCC 1 cut(s) 224
BisI GCNGC 1 cut(s) 365
BlsI GCNGC 1 cut(s) 366
Bme1390I CCNGG 2 cut(s) 408, 539
BmeT110I CYCGRG 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 282
BmiI GGNNCC 1 cut(s) 284
BmrFI CCNGG 2 cut(s) 408, 539
BmrI ACTGGG 1 cut(s) 492
BmsI GCATC 3 cut(s) 542, 564, 575
BmuI ACTGGG 1 cut(s) 492
BpiI GAAGAC 1 cut(s) 606
BplI GAGNNNNNCTC 2 cut(s) 380, 412
BpmI CTGGAG 1 cut(s) 521
BpuEI CTTGAG 1 cut(s) 65
BsaI GGTCTC 1 cut(s) 568
BsaJI CCNNGG 1 cut(s) 142
Bse1I ACTGG 2 cut(s) 376, 498
BseBI CCWGG 2 cut(s) 408, 539
BseDI CCNNGG 1 cut(s) 142
BseGI GGATG 2 cut(s) 555, 566
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 2 cut(s) 376, 498
BseXI GCAGC 1 cut(s) 351
BshFI GGCC 1 cut(s) 283
BsiHKAI GWGCWC 1 cut(s) 271
BsiHKCI CYCGRG 1 cut(s) 68
BsmAI GTCTC 3 cut(s) 69, 400, 568
BsmI GAATGC 2 cut(s) 265, 473
BsnI GGCC 1 cut(s) 283
Bso31I GGTCTC 1 cut(s) 568
BsoBI CYCGRG 1 cut(s) 68
Bsp1286I GDGCHC 1 cut(s) 271
Bsp143I GATC 2 cut(s) 351, 418
Bsp19I CCATGG 1 cut(s) 142
BspANI GGCC 1 cut(s) 283
BspCNI CTCAG 1 cut(s) 238
BspLI GGNNCC 1 cut(s) 284
BspMI ACCTGC 1 cut(s) 254
BspTNI GGTCTC 1 cut(s) 568
BsrI ACTGG 2 cut(s) 376, 498
BssECI CCNNGG 1 cut(s) 142
BssMI GATC 2 cut(s) 351, 418
BssT1I CCWWGG 1 cut(s) 142
Bst2UI CCWGG 2 cut(s) 408, 539
Bst4CI ACNGT 2 cut(s) 458, 592
Bst6I CTCTTC 1 cut(s) 320
BstAPI GCANNNNNTGC 1 cut(s) 29
BstDEI CTNAG 1 cut(s) 246
BstDSI CCRYGG 1 cut(s) 142
BstF5I GGATG 2 cut(s) 555, 566
BstKTI GATC 2 cut(s) 354, 421
BstMAI GTCTC 3 cut(s) 69, 400, 568
BstMBI GATC 2 cut(s) 351, 418
BstMWI GCNNNNNNNGC 1 cut(s) 29
BstNI CCWGG 2 cut(s) 408, 539
BstSCI CCNGG 2 cut(s) 406, 537
BstSFI CTRYAG 1 cut(s) 90
BstV1I GCAGC 1 cut(s) 351
BstV2I GAAGAC 1 cut(s) 606
BsuI GTATCC 1 cut(s) 224
BsuRI GGCC 1 cut(s) 283
BtgI CCRYGG 1 cut(s) 142
BtsCI GGATG 2 cut(s) 555, 566
BveI ACCTGC 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 282
CsiI ACCWGGT 1 cut(s) 406
Csp6I GTAC 1 cut(s) 619
CviAII CATG 1 cut(s) 143
CviJI RGCY 7 cut(s) 43, 79, 276, 283, 364, 496, 545
CviKI_1 RGCY 7 cut(s) 43, 79, 276, 283, 364, 496, 545
CviQI GTAC 1 cut(s) 619
DdeI CTNAG 1 cut(s) 246
DpnI GATC 2 cut(s) 353, 420
DpnII GATC 2 cut(s) 351, 418
Eam1104I CTCTTC 1 cut(s) 320
EarI CTCTTC 1 cut(s) 320
Eco130I CCWWGG 1 cut(s) 142
Eco31I GGTCTC 1 cut(s) 568
Eco88I CYCGRG 1 cut(s) 68
EcoRII CCWGG 2 cut(s) 406, 537
EcoT14I CCWWGG 1 cut(s) 142
EcoT22I ATGCAT 2 cut(s) 343, 557
ErhI CCWWGG 1 cut(s) 142
FaeI CATG 1 cut(s) 146
FaiI YATR 7 cut(s) 21, 123, 144, 189, 210, 339, 404
FatI CATG 1 cut(s) 142
FblI GTMKAC 1 cut(s) 307
Fnu4HI GCNGC 1 cut(s) 365
FokI GGATG 2 cut(s) 542, 553
Fsp4HI GCNGC 1 cut(s) 365
FspBI CTAG 3 cut(s) 173, 297, 516
GluI GCNGC 1 cut(s) 365
GsuI CTGGAG 1 cut(s) 521
HaeIII GGCC 1 cut(s) 283
Hin1II CATG 1 cut(s) 146
HinfI GANTC 2 cut(s) 229, 484
HphI GGTGA 2 cut(s) 48, 445
Hpy166II GTNNAC 2 cut(s) 308, 619
Hpy188I TCNGA 5 cut(s) 12, 111, 258, 423, 571
Hpy188III TCNNGA 4 cut(s) 68, 488, 524, 609
Hpy8I GTNNAC 2 cut(s) 308, 619
HpyAV CCTTC 2 cut(s) 124, 569
HpyCH4III ACNGT 2 cut(s) 458, 592
HpyCH4IV ACGT 1 cut(s) 26
HpyCH4V TGCA 6 cut(s) 23, 32, 194, 263, 341, 555
HpyF10VI GCNNNNNNNGC 1 cut(s) 29
HpyF3I CTNAG 1 cut(s) 246
HpySE526I ACGT 1 cut(s) 26
Hsp92II CATG 1 cut(s) 146
Kzo9I GATC 2 cut(s) 351, 418
LmnI GCTCC 2 cut(s) 361, 540
Lsp1109I GCAGC 1 cut(s) 351
LweI GCATC 3 cut(s) 542, 564, 575
MabI ACCWGGT 1 cut(s) 406
MaeI CTAG 3 cut(s) 173, 297, 516
MaeII ACGT 1 cut(s) 26
MalI GATC 2 cut(s) 353, 420
MboI GATC 2 cut(s) 351, 418
MboII GAAGA 3 cut(s) 337, 461, 611
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 3 cut(s) 135, 290, 530
MlyI GAGTC 1 cut(s) 223
MmeI TCCRAC 1 cut(s) 339
MnlI CCTC 5 cut(s) 28, 64, 128, 161, 328
Mph1103I ATGCAT 2 cut(s) 343, 557
MroXI GAANNNNTTC 1 cut(s) 379
MseI TTAA 3 cut(s) 504, 548, 585
MspR9I CCNGG 2 cut(s) 408, 539
Mva1269I GAATGC 2 cut(s) 265, 473
MvaI CCWGG 2 cut(s) 408, 539
MwoI GCNNNNNNNGC 1 cut(s) 29
NcoI CCATGG 1 cut(s) 142
NdeII GATC 2 cut(s) 351, 418
NlaIII CATG 1 cut(s) 146
NlaIV GGNNCC 1 cut(s) 284
NsiI ATGCAT 2 cut(s) 343, 557
PaeR7I CTCGAG 1 cut(s) 68
PaqCI CACCTGC 1 cut(s) 254
PctI GAATGC 2 cut(s) 265, 473
PdmI GAANNNNTTC 1 cut(s) 379
PfeI GAWTC 1 cut(s) 484
PkrI GCNGC 1 cut(s) 366
PleI GAGTC 1 cut(s) 223
PpsI GAGTC 1 cut(s) 223
Psp1406I AACGTT 1 cut(s) 26
Psp6I CCWGG 2 cut(s) 406, 537
PspGI CCWGG 2 cut(s) 406, 537
PspN4I GGNNCC 1 cut(s) 284
PspPI GGNCC 1 cut(s) 282
RsaI GTAC 1 cut(s) 620
RsaNI GTAC 1 cut(s) 619
SaqAI TTAA 3 cut(s) 504, 548, 585
SatI GCNGC 1 cut(s) 365
Sau3AI GATC 2 cut(s) 351, 418
Sau96I GGNCC 1 cut(s) 282
SchI GAGTC 1 cut(s) 223
ScrFI CCNGG 2 cut(s) 408, 539
SduI GDGCHC 1 cut(s) 271
SexAI ACCWGGT 1 cut(s) 406
SfaNI GCATC 3 cut(s) 542, 564, 575
SfcI CTRYAG 1 cut(s) 90
Sfr274I CTCGAG 1 cut(s) 68
SlaI CTCGAG 1 cut(s) 68
SmlI CTYRAG 2 cut(s) 68, 80
SmoI CTYRAG 2 cut(s) 68, 80
Sse9I AATT 3 cut(s) 135, 290, 530
SspI AATATT 2 cut(s) 166, 225
SspMI CTAG 3 cut(s) 173, 297, 516
StyD4I CCNGG 2 cut(s) 406, 537
StyI CCWWGG 1 cut(s) 142
TaaI ACNGT 2 cut(s) 458, 592
TaiI ACGT 1 cut(s) 29
TaqI TCGA 1 cut(s) 69
TasI AATT 3 cut(s) 135, 290, 530
TatI WGTACW 1 cut(s) 618
TfiI GAWTC 1 cut(s) 484
Tru1I TTAA 3 cut(s) 504, 548, 585
Tru9I TTAA 3 cut(s) 504, 548, 585
TseI GCWGC 1 cut(s) 364
TspDTI ATGAA 1 cut(s) 543
XapI RAATTY 1 cut(s) 290
XhoI CTCGAG 1 cut(s) 68
XmiI GTMKAC 1 cut(s) 307
XmnI GAANNNNTTC 1 cut(s) 379
XspI CTAG 3 cut(s) 173, 297, 516
Zsp2I ATGCAT 2 cut(s) 343, 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.