pycom11g15790
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0006137
Physical Location & Seq
Forward (+)
16745508 .. 16747137
1630 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g15790.2

Sequence Viewer

Length: 1116 bp
ATGGGGTCTGCTCATGATGCCCGTGACACTTTGTCAGTTGTAAAGAATCCTAAGAATTTGGGTCATCCTGAATCAAAAGAAAGGGGTGAAGGGACATCTTCTCCTATGTCTCTCTTATCATCGTCGAATCCATCACCCTCTAAAAAGCAACAGCCACCAGAGAGTCCTGCTGTGCTCACGGCTTATTCTCCAGATAAATTGGCTGGTGATTTGCATCTGTTTGATGGCTCCTTGGCCTTCACAGCAGAAGAACTTTCCTGTGCTCCAGCAGAAGCTATTGGAAGGAGTTGTCATGGGACAATGTACAAAGCAATGCTCGACTCCGGTCATGTATTGGCTGTCAAATGGCTACGGGAGGGAATAGCAAAAGGAAGGAAAGAATTTGCAAGAGAAGTGAAGAAACTAGGAAACATCAGGCACCCGAATCTTGTTTCTCTGCTGGGTTATTACTGGGGCCCTAAAGAACATGAGAAACTGATTATATCAACTTATATCAATGCACAATCGTTGGCATTCCATCTCCATGAGGCAGAGCGAACAAAACTCTCTACCTTGTCACTTGAGGAACGGCTTAGGATTTCTGTAGATGTTGCCCGATGTCTGAACTTCCTGCATAATGAGAAGGCAATTCCCCATGGCAACCTCAAATCCACGAATATTTTATTAGAAACTCCTAGTCTGAATGCACTCCTTACAGATTATAGTCTCCACCGAATTTTGACTCCCGCTGGGACTACTGAGCAAGTCTTGAATGCAGGTGCTCTTGGCTATCGCCCCCCTGAATTTGCTAGCTCAAGTAAGCCCTGCCCATCGTTGAAAAGTGATGTCTATGCATTTGGGGTGATCTTGTTGGAGCTCCTGACTGGAAAGAGTTCTGGGGAGATTGTCTCTGGGATACCGGGTGTGGTTGATCTGACAGACTGGGTGAGACTGTTGGCAGAAGAAAACCGTTGTTTTGAATGCCTTGACAGACTGATTCTGGAAAGGCTGAGCGTAAAGAACTCCCCAACAGTTCTTGATGGTATGCTACAGGTAGCTCTAAGATGTATTCATCCAGCATCCGAAAGACCCGACATTAAAACTGTGTTCGAAGACATTTCAAGAATAGTGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

372

Amino Acids

40.62

Weight (kDa)

6.9

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 746
Acc36I ACCTGC 1 cut(s) 746
AccB1I GGYRCC 1 cut(s) 417
AciI CCGC 1 cut(s) 726
AcsI RAATTY 4 cut(s) 55, 380, 714, 782
AfaI GTAC 1 cut(s) 305
AgsI TTSAA 4 cut(s) 751, 817, 959, 1101
AhdI GACNNNNNGTC 1 cut(s) 31
AluBI AGCT 4 cut(s) 275, 792, 856, 1037
AluI AGCT 4 cut(s) 275, 792, 856, 1037
Alw21I GWGCWC 4 cut(s) 177, 265, 763, 858
Alw26I GTCTC 4 cut(s) 114, 710, 892, 922
AoxI GGCC 2 cut(s) 234, 454
ApaI GGGCCC 1 cut(s) 458
ApoI RAATTY 4 cut(s) 55, 380, 714, 782
Asp700I GAANNNNTTC 1 cut(s) 871
AspS9I GGNCC 2 cut(s) 454, 455
AsuC2I CCSGG 1 cut(s) 900
AsuHPI GGTGA 5 cut(s) 98, 126, 218, 853, 937
AsuII TTCGAA 1 cut(s) 1089
AsuNHI GCTAGC 1 cut(s) 788
BaeGI GKGCMC 1 cut(s) 458
BanI GGYRCC 1 cut(s) 417
BanII GRGCYC 2 cut(s) 458, 858
BbsI GAAGAC 1 cut(s) 1098
Bbv12I GWGCWC 4 cut(s) 177, 265, 763, 858
BccI CCATC 5 cut(s) 139, 218, 525, 817, 1013
BceAI ACGGC 2 cut(s) 195, 584
BciVI GTATCC 1 cut(s) 888
BcnI CCSGG 1 cut(s) 900
BcoDI GTCTC 4 cut(s) 114, 710, 892, 922
BfaI CTAG 3 cut(s) 404, 675, 789
BfmI CTRYAG 2 cut(s) 582, 1028
BfuAI ACCTGC 1 cut(s) 746
BfuI GTATCC 1 cut(s) 888
BlpI GCTNAGC 1 cut(s) 989
Bme1390I CCNGG 1 cut(s) 900
BmeRI GACNNNNNGTC 1 cut(s) 31
BmgT120I GGNCC 2 cut(s) 454, 455
BmiI GGNNCC 4 cut(s) 229, 419, 455, 456
BmrFI CCNGG 1 cut(s) 900
BmrI ACTGGG 2 cut(s) 460, 931
BmsI GCATC 3 cut(s) 7, 223, 1067
BmtI GCTAGC 1 cut(s) 792
BmuI ACTGGG 2 cut(s) 460, 931
BoxI GACNNNNGTC 1 cut(s) 324
BpiI GAAGAC 1 cut(s) 1098
BplI GAGNNNNNCTC 2 cut(s) 872, 904
BpmI CTGGAG 2 cut(s) 174, 249
Bpu10I CCTNAGC 1 cut(s) 572
Bpu1102I GCTNAGC 1 cut(s) 989
Bpu14I TTCGAA 1 cut(s) 1089
BpuEI CTTGAG 2 cut(s) 581, 778
BpuMI CCSGG 1 cut(s) 900
BsaBI GATNNNNATC 1 cut(s) 213
BsaJI CCNNGG 2 cut(s) 231, 634
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 2 cut(s) 85, 115
Bse1I ACTGG 3 cut(s) 455, 868, 926
Bse3DI GCAATG 1 cut(s) 318
Bse8I GATNNNNATC 1 cut(s) 213
BseDI CCNNGG 2 cut(s) 231, 634
BseGI GGATG 3 cut(s) 64, 1051, 1058
BseJI GATNNNNATC 1 cut(s) 213
BseMI GCAATG 1 cut(s) 318
BseMII CTCAG 2 cut(s) 729, 980
BseNI ACTGG 3 cut(s) 455, 868, 926
BseSI GKGCMC 1 cut(s) 458
BseYI CCCAGC 2 cut(s) 439, 728
BshFI GGCC 2 cut(s) 236, 456
BshNI GGYRCC 1 cut(s) 417
BsiHKAI GWGCWC 4 cut(s) 177, 265, 763, 858
BsiSI CCGG 2 cut(s) 324, 899
BslFI GGGAC 3 cut(s) 106, 310, 745
BsmAI GTCTC 4 cut(s) 114, 710, 892, 922
BsmFI GGGAC 3 cut(s) 106, 310, 745
BsmI GAATGC 4 cut(s) 512, 688, 757, 965
BsnI GGCC 2 cut(s) 236, 456
Bsp119I TTCGAA 1 cut(s) 1089
Bsp120I GGGCCC 1 cut(s) 454
Bsp1286I GDGCHC 5 cut(s) 177, 265, 458, 763, 858
Bsp1407I TGTACA 1 cut(s) 303
Bsp143I GATC 2 cut(s) 843, 910
Bsp1720I GCTNAGC 1 cut(s) 989
Bsp19I CCATGG 1 cut(s) 634
BspACI CCGC 1 cut(s) 726
BspANI GGCC 2 cut(s) 236, 456
BspCNI CTCAG 2 cut(s) 730, 981
BspHI TCATGA 1 cut(s) 13
BspLI GGNNCC 4 cut(s) 229, 419, 455, 456
BspMI ACCTGC 1 cut(s) 746
BspOI GCTAGC 1 cut(s) 792
BspT104I TTCGAA 1 cut(s) 1089
BspT107I GGYRCC 1 cut(s) 417
BsrDI GCAATG 1 cut(s) 318
BsrGI TGTACA 1 cut(s) 303
BsrI ACTGG 3 cut(s) 455, 868, 926
BssECI CCNNGG 2 cut(s) 231, 634
BssMI GATC 2 cut(s) 843, 910
BssT1I CCWWGG 2 cut(s) 231, 634
Bst4CI ACNGT 4 cut(s) 933, 950, 1012, 1084
BstAUI TGTACA 1 cut(s) 303
BstBI TTCGAA 1 cut(s) 1089
BstC8I GCNNGC 1 cut(s) 790
BstDEI CTNAG 5 cut(s) 51, 572, 738, 989, 1040
BstDSI CCRYGG 1 cut(s) 634
BstF5I GGATG 3 cut(s) 64, 1051, 1058
BstKTI GATC 2 cut(s) 846, 913
BstMAI GTCTC 4 cut(s) 114, 710, 892, 922
BstMBI GATC 2 cut(s) 843, 910
BstMWI GCNNNNNNNGC 2 cut(s) 17, 242
BstPAI GACNNNNGTC 1 cut(s) 324
BstSCI CCNGG 1 cut(s) 898
BstSFI CTRYAG 2 cut(s) 582, 1028
BstSLI GKGCMC 1 cut(s) 458
BstV2I GAAGAC 1 cut(s) 1098
BsuI GTATCC 1 cut(s) 888
BsuRI GGCC 2 cut(s) 236, 456
BtgI CCRYGG 1 cut(s) 634
BtsCI GGATG 3 cut(s) 64, 1051, 1058
BveI ACCTGC 1 cut(s) 746
Cac8I GCNNGC 1 cut(s) 790
CciI TCATGA 1 cut(s) 13
Cfr13I GGNCC 2 cut(s) 454, 455
Csp6I GTAC 1 cut(s) 304
CviAII CATG 6 cut(s) 14, 293, 329, 467, 524, 635
CviQI GTAC 1 cut(s) 304
DdeI CTNAG 5 cut(s) 51, 572, 738, 989, 1040
DpnI GATC 2 cut(s) 845, 912
DpnII GATC 2 cut(s) 843, 910
DriI GACNNNNNGTC 1 cut(s) 31
Eam1105I GACNNNNNGTC 1 cut(s) 31
Ecl136II GAGCTC 1 cut(s) 856
Eco130I CCWWGG 2 cut(s) 231, 634
Eco24I GRGCYC 2 cut(s) 458, 858
Eco53kI GAGCTC 1 cut(s) 856
EcoICRI GAGCTC 1 cut(s) 856
EcoO109I RGGNCCY 2 cut(s) 454, 455
EcoT14I CCWWGG 2 cut(s) 231, 634
EcoT22I ATGCAT 1 cut(s) 835
EcoT38I GRGCYC 2 cut(s) 458, 858
ErhI CCWWGG 2 cut(s) 231, 634
FaeI CATG 6 cut(s) 17, 296, 332, 470, 527, 638
FaqI GGGAC 3 cut(s) 106, 310, 745
FatI CATG 6 cut(s) 13, 292, 328, 466, 523, 634
FauI CCCGC 1 cut(s) 733
FokI GGATG 3 cut(s) 51, 1038, 1045
FriOI GRGCYC 2 cut(s) 458, 858
FspBI CTAG 3 cut(s) 404, 675, 789
GsaI CCCAGC 2 cut(s) 443, 732
GsuI CTGGAG 2 cut(s) 174, 249
HaeIII GGCC 2 cut(s) 236, 456
HapII CCGG 2 cut(s) 324, 899
Hin1II CATG 6 cut(s) 17, 296, 332, 470, 527, 638
HinfI GANTC 8 cut(s) 46, 71, 127, 163, 320, 424, 721, 976
HpaII CCGG 2 cut(s) 324, 899
HphI GGTGA 5 cut(s) 98, 126, 218, 853, 937
Hpy166II GTNNAC 1 cut(s) 1111
Hpy188I TCNGA 4 cut(s) 603, 681, 915, 1063
Hpy188III TCNNGA 8 cut(s) 14, 68, 191, 748, 859, 980, 1016, 1101
Hpy8I GTNNAC 1 cut(s) 1111
Hpy99I CGWCG 1 cut(s) 127
HpyAV CCTTC 5 cut(s) 83, 247, 276, 366, 616
HpyCH4III ACNGT 4 cut(s) 933, 950, 1012, 1084
HpyCH4V TGCA 7 cut(s) 214, 386, 500, 613, 686, 755, 833
HpyF10VI GCNNNNNNNGC 2 cut(s) 17, 242
HpyF3I CTNAG 5 cut(s) 51, 572, 738, 989, 1040
Hsp92II CATG 6 cut(s) 17, 296, 332, 470, 527, 638
Kzo9I GATC 2 cut(s) 843, 910
LmnI GCTCC 4 cut(s) 233, 268, 853, 861
LweI GCATC 3 cut(s) 7, 223, 1067
MaeI CTAG 3 cut(s) 404, 675, 789
MaeIII GTNAC 2 cut(s) 23, 555
MalI GATC 2 cut(s) 845, 912
MboI GATC 2 cut(s) 843, 910
MboII GAAGA 5 cut(s) 90, 260, 409, 953, 1103
MhlI GDGCHC 5 cut(s) 177, 265, 458, 763, 858
MluCI AATT 6 cut(s) 55, 197, 380, 627, 714, 782
MlyI GAGTC 3 cut(s) 172, 314, 715
MmeI TCCRAC 1 cut(s) 831
MnlI CCTC 5 cut(s) 148, 349, 520, 556, 653
Mph1103I ATGCAT 1 cut(s) 835
MroXI GAANNNNTTC 1 cut(s) 871
MseI TTAA 1 cut(s) 1077
MslI CAYNNNNRTG 1 cut(s) 522
MspA1I CMGCKG 1 cut(s) 728
MspI CCGG 2 cut(s) 324, 899
MspR9I CCNGG 1 cut(s) 900
Mva1269I GAATGC 4 cut(s) 512, 688, 757, 965
MwoI GCNNNNNNNGC 2 cut(s) 17, 242
NciI CCSGG 1 cut(s) 900
NcoI CCATGG 1 cut(s) 634
NdeII GATC 2 cut(s) 843, 910
NheI GCTAGC 1 cut(s) 788
NlaIII CATG 6 cut(s) 17, 296, 332, 470, 527, 638
NlaIV GGNNCC 4 cut(s) 229, 419, 455, 456
NmuCI GTSAC 2 cut(s) 23, 555
NsiI ATGCAT 1 cut(s) 835
NspV TTCGAA 1 cut(s) 1089
PagI TCATGA 1 cut(s) 13
PaqCI CACCTGC 1 cut(s) 746
PctI GAATGC 4 cut(s) 512, 688, 757, 965
PdmI GAANNNNTTC 1 cut(s) 871
PfeI GAWTC 5 cut(s) 46, 71, 127, 424, 976
PleI GAGTC 3 cut(s) 171, 314, 715
PpsI GAGTC 3 cut(s) 171, 314, 715
PshAI GACNNNNGTC 1 cut(s) 324
Psp124BI GAGCTC 1 cut(s) 858
PspFI CCCAGC 2 cut(s) 439, 728
PspN4I GGNNCC 4 cut(s) 229, 419, 455, 456
PspOMI GGGCCC 1 cut(s) 454
PspPI GGNCC 2 cut(s) 454, 455
RsaI GTAC 1 cut(s) 305
RsaNI GTAC 1 cut(s) 304
RseI CAYNNNNRTG 1 cut(s) 522
SacI GAGCTC 1 cut(s) 858
SaqAI TTAA 1 cut(s) 1077
Sau3AI GATC 2 cut(s) 843, 910
Sau96I GGNCC 2 cut(s) 454, 455
SchI GAGTC 3 cut(s) 172, 314, 715
ScrFI CCNGG 1 cut(s) 900
SduI GDGCHC 5 cut(s) 177, 265, 458, 763, 858
SetI ASST 8 cut(s) 277, 554, 645, 760, 794, 858, 1035, 1039
SfaNI GCATC 3 cut(s) 7, 223, 1067
SfcI CTRYAG 2 cut(s) 582, 1028
SfuI TTCGAA 1 cut(s) 1089
SmiMI CAYNNNNRTG 1 cut(s) 522
SmlI CTYRAG 2 cut(s) 560, 793
SmoI CTYRAG 2 cut(s) 560, 793
Sse9I AATT 6 cut(s) 55, 197, 380, 627, 714, 782
SsiI CCGC 1 cut(s) 726
SspI AATATT 1 cut(s) 658
SspMI CTAG 3 cut(s) 404, 675, 789
SstI GAGCTC 1 cut(s) 858
StyD4I CCNGG 1 cut(s) 898
StyI CCWWGG 2 cut(s) 231, 634
TaaI ACNGT 4 cut(s) 933, 950, 1012, 1084
TaqI TCGA 3 cut(s) 125, 318, 1089
TasI AATT 6 cut(s) 55, 197, 380, 627, 714, 782
TatI WGTACW 1 cut(s) 303
TfiI GAWTC 5 cut(s) 46, 71, 127, 424, 976
Tru1I TTAA 1 cut(s) 1077
Tru9I TTAA 1 cut(s) 1077
TseFI GTSAC 2 cut(s) 23, 555
Tsp45I GTSAC 2 cut(s) 23, 555
TspDTI ATGAA 1 cut(s) 1040
XapI RAATTY 4 cut(s) 55, 380, 714, 782
XmnI GAANNNNTTC 1 cut(s) 871
XspI CTAG 3 cut(s) 404, 675, 789
Zsp2I ATGCAT 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.