Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0011122

Physical Location & Seq

Genomic Coordinates Reverse (-)

22105336 .. 22109467

Gene Structure 4132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGAGTTTTGCCGGACCCAGAATTTCCAAACCGGCAAAGCCCCCAAATCCATCACCCACAATGCCGCCGCAGCCGCAGCAACCACCAAACTCCTCTTCAAAGTCCTCTGCTTCTTCTTCCCTCTCGACCCACCTGGCCATGGTGGAGCTCAAGCAGAGAATCCTCACCTCCCTCTCCAAACTCTCCGACCGAGACACGTACCAAATCGCCGTCGAAGATCTCGAGAAAATCATCCAAACCCTGGCGCCGGAGGGCCTGCCTATGCTCCTCAACTGCCTCTACGACGCCTCCGCCGATCCGAAACCCGCCGTCAAGAAAGAGTCTTTACGCCTGCTTGCATTGGTCTCTGCTTCCCACCCCGATTTCACCTCCACCCATTTGACCAAAATCATTGCCCACATCGTCAAGAGGCTCAAGGATGCCGATTCCGGCGTCCGGGACGCGTGCCGCGACGCCATTGGCTCGCTATCGGCGCAGTACTTGAAGGCAGAGAGTGTGAGCGACAATGGGTCGGTTGTGGGTTTGTTTATGAAGCCTTTGTTTGAGGCTATGGCCGAGCAGAACAAGGGGGTGCAATCTGGTGCGGCACTGTGTATGGCTAAGATTGTAGACTGCGCTTTAGACCCGCCTGTTTCGTCTTTTCAAAAGCTGTGTCCAAGGATCTGCAAGTTGCTTAACAATCCTAACTTCTTGGCTAAGGCATCGCTCTTGCCGGTTGTTTCGAGCCTGTCTCAGGTTGGAGCGATTGCGCCCCAAAGCTTGGATAATCTACTGCAAAGTATTCATGAATGCCTTGGAAGCACAGATTGGGCAACACGTAAAGCAGCAGCTGATGTGCTGGTTGCATTAGCATTGCATTCGAGCAACTTGATTACAGATAGAACTGCTTCCACCCTGACTGTCCTCGAGTCTTGCCGTTTTGACAAGATTAAACCTGTCAGAGATAGCATGACAGAGGCATTGCAGTTTTGGAAAAAGATAGCTGGGAAAGGAGAAGATGAAGCTCCAAATGACAAGAAAGTCTCGTCTCATGCTGAGTTGTCAGAGAAGAATGAGCCAAAAAATTCAAAGCCTGGTGAGAAAACAGATCAAGGAGCAAAGGGTTCATCTAATGGTTCATCTCCTACTTCAGATTCTGTTTCTGAATCCAAAGCCAGTGGAGATAAAGCGGGTGTAGCTTTGAAGAAGAAACTGCCCATCTTAACTGACAAAGAGCTAAACCCAGAATTCTTCCAGAAACTTGAAAAGAGGGTTTCTGATGATTTGCCCGTTGAGGTAGTTGTTCCTCGTAGACATGTCAATTCTTCAAACTCAAATAATGAGGTAGAACCAGAGGCAAATGATACAAATTCCAAAGAAACTCAAAACCGGATTGCAAACAGCCAATTTGATGATATTCATGGATCTTTCAGTAGTAAATACCGTAACACAGAGAGAGGAATAGCTGGTCTGTATACTAAACAACGAGATCATGATGACCTTGCGAGGGATAAATGGCTAGAAGAAAGGGCGAATGGAAAAGACTCCAGAATGAGAGCGGTTGATATTGATGACAGGATTGATATAAATCAAAGGGAGTCGTCCAGTAGTCGTGCAGGTTTCTCTAAACCTGATGGTCAACCTGAAGGATCCCTTGTCAATAACAAAGGAAATTGGTTGGCTATCCAAAGGCAATTGTTGCAGCTGGAGAGACAACAAGGTCATCTGATGAGCATGTTGCAGGATTTCATGGGCGGGTCTCATGACAGCATGATAACTTTGGAGAACAGAGTAAGGGGTCTTGAGAGAGTTGTTGAAGACTTGGCAAGAGATTTATCAATATCATCAGGTAGAAGAGGCAGTAATTTTTCGATGGGGTATGAGGGGTCTTCTAGTAGACCTTTAGGCAAGTATAACGGCTTTCCTGATTACACTGGTAACAAGTTTGGAAGAGGTGGAGATGGACGAATTCCATATGGCGAACGATTTGCCCAAAATGATGGACATGTTTCCGGCATGAGGGGACGGGGCCCTACTTGGAGATCTGACATGTCTGAGGTGTGGGATTTTCCAACATATGGTGGTTCCAGAGGTGGACATATTGGTTCGAGGAAGGCTGTAGGAGGTGGTCCTGGGGATGGTAGGTCACCCAAATCAGAGAATGGGAGTGATCAAGGTAACAGCAGGCGAGCATGGGATAAAGGGGCTGGACCTGTTAGGTTTGGTGAGGGGCCTTCCGCAAGAAGTGTTTGGCAAGCTTCCAAAGATGAAGCTACCTTGGAAGCAATTCGTGTGGCTGGAGAGGACAATGGAACATCTAGATCTGGAAGAGTGGCTATACCTGAATTGACTGCAGAGGCTATGGAAGATGATAATGTGGGCCAAGAGCGGAATCCAATCTGGAATTCTTGGACTAATGCAATGGATGCTCTTCAAGTGGGTGATCTGGATACGGCCTTTTTGGAAGTGTTGTCTACAGGAGATGATATCTTGCTTGTAAAGTTGATGGACAGATCAGGTCCTTGCGTGATTGACCAACTTTCAAATGAGACAGCAACTGAGGTCTTGCATGCTGTTGGGCAATTTTTACCAGAGCCAAACTTGTTTGACATCTGTCTGGCTTGGATTCAGCAGTTGGTTGAAATAGTGCTCGAAAATGGATCTGATGTTTTCGGTCTTCCCACTGACATAAAGAAAGAACTCGTTTTGAATCTGCATGAAGCTTCTGTAACAATGGATCTGCCCGAGGACTGGGAAGGTGCAACGCCGGATCAACTTTTGGTGCAGTTGGCATCATCCTGGGGAATCAATCCTCAGCAGCATGACAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009987 GO:0010005 GO:0010031 GO:0015630 GO:0015631 GO:0016043 GO:0016049 GO:0030863 GO:0030981 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0050879 GO:0055028 GO:0060560 GO:0071840 GO:0071944 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

937

Amino Acids

101.77

Weight (kDa)

5.63

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOR1L1_N	PF24714	48 - 326	2.2e-123	TORTIFOLIA1 N-terminal
TOR1L1_C	PF24713	793 - 927	1e-62	TORTIFOLIA1 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27060
fragaria_vesca	FvH4_3g22240
malus_domestica	MD03G1206600.v1.1 MD11G1222000.v1.1
prunus_persica	Prupe.4G209400_v2.0.a1 Prupe.4G209400_v2.0.a1
pyrus_communis	pycom03g15640 pycom11g19580
rosa_chinensis	RchiOBHm_Chr5g0038291
rosa_laevigata	RLG00000033844
rosa_multiflora	Rmu_sc0000764.1_g000003 Rmu_sc0003858.1_g000004 Rmu_sc0035524.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042730
rosa_rugosa	Rorug05G0171800
rosa_samantha	Rh5AG259100 Rh5BG262900 Rh5CG295300 Rh5DG271900
rosa_wichuraiana	Rw5G024250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1019, 1698
Acc36I	ACCTGC	1 cut(s)	1586
AccB1I	GGYRCC	1 cut(s)	244
AccB7I	CCANNNNNTGG	3 cut(s)	241, 760, 2057
AccBSI	CCGCTC	2 cut(s)	1538, 2368
AccI	GTMKAC	5 cut(s)	609, 1291, 1454, 1876, 2453
AccII	CGCG	2 cut(s)	443, 450
AclWI	GGATC	8 cut(s)	290, 668, 1411, 1623, 1636, 2647, 2724, 2757
AcoI	YGGCCR	2 cut(s)	135, 552
AcsI	RAATTY	6 cut(s)	21, 1063, 1226, 1348, 1947, 2383
AcuI	CTGAAG	2 cut(s)	1113, 1644
AcyI	GRCGYC	4 cut(s)	245, 285, 432, 453
AfaI	GTAC	2 cut(s)	200, 479
AflIII	ACRYGT	6 cut(s)	195, 441, 815, 1294, 1984, 2028
AhdI	GACNNNNNGTC	1 cut(s)	508
AjnI	CCWGG	5 cut(s)	132, 240, 1072, 2110, 2777
AjuI	GAANNNNNNNTTGG	6 cut(s)	79, 111, 790, 822, 2368, 2400
Alw21I	GWGCWC	2 cut(s)	150, 2631
Alw26I	GTCTC	8 cut(s)	186, 349, 735, 1027, 1032, 1684, 1743, 2522
AlwI	GGATC	8 cut(s)	290, 668, 1411, 1623, 1636, 2647, 2724, 2757
AlwNI	CAGNNNCTG	3 cut(s)	830, 1136, 2537
Ama87I	CYCGRG	3 cut(s)	221, 905, 2723
AoxI	GGCC	7 cut(s)	135, 253, 552, 2008, 2210, 2359, 2433
ApaI	GGGCCC	1 cut(s)	2012
ApeKI	GCWGC	6 cut(s)	70, 76, 824, 827, 1681, 2797
ApoI	RAATTY	6 cut(s)	21, 1063, 1226, 1348, 1947, 2383
ArsI	GACNNNNNNTTYG	2 cut(s)	637, 669
Asp700I	GAANNNNTTC	2 cut(s)	886, 2265
AspLEI	GCGC	4 cut(s)	247, 475, 617, 751
AspS9I	GGNCC	9 cut(s)	14, 253, 2008, 2009, 2108, 2189, 2210, 2359, 2498
AsuC2I	CCSGG	1 cut(s)	437
AsuHPI	GGTGA	7 cut(s)	45, 157, 358, 1088, 2118, 2216, 2432
AvaI	CYCGRG	3 cut(s)	221, 905, 2723
AvaII	GGWCC	4 cut(s)	14, 2108, 2189, 2498
BaeGI	GKGCMC	1 cut(s)	2012
BalI	TGGCCA	1 cut(s)	137
BamHI	GGATCC	1 cut(s)	1628
BanI	GGYRCC	1 cut(s)	244
BanII	GRGCYC	2 cut(s)	150, 2012
BbsI	GAAGAC	3 cut(s)	1803, 1860, 2648
Bbv12I	GWGCWC	2 cut(s)	150, 2631
BbvCI	CCTCAGC	1 cut(s)	2793
BbvI	GCAGC	5 cut(s)	82, 88, 836, 839, 1693
BccI	CCATC	8 cut(s)	58, 1205, 1607, 1846, 1934, 1973, 2111, 2479
BceAI	ACGGC	5 cut(s)	194, 293, 900, 1912, 2448
BcgI	CGANNNNNNTGC	4 cut(s)	840, 874, 1949, 1983
BciT130I	CCWGG	5 cut(s)	134, 242, 1074, 2112, 2779
BciVI	GTATCC	1 cut(s)	2422
BclI	TGATCA	1 cut(s)	2149
BcnI	CCSGG	1 cut(s)	437
BcoDI	GTCTC	8 cut(s)	186, 349, 735, 1027, 1032, 1684, 1743, 2522
BfaI	CTAG	3 cut(s)	1499, 1872, 2298
BfmI	CTRYAG	3 cut(s)	2097, 2331, 2454
BfoI	RGCGCY	1 cut(s)	248
BfuAI	ACCTGC	1 cut(s)	1586
BfuI	GTATCC	1 cut(s)	2422
BglII	AGATCT	3 cut(s)	217, 2021, 2300
BmcAI	AGTACT	1 cut(s)	479
Bme1390I	CCNGG	6 cut(s)	134, 242, 437, 1074, 2112, 2779
Bme18I	GGWCC	4 cut(s)	14, 2108, 2189, 2498
BmeRI	GACNNNNNGTC	1 cut(s)	508
BmeT110I	CYCGRG	3 cut(s)	221, 905, 2723
BmgT120I	GGNCC	9 cut(s)	14, 253, 2008, 2009, 2108, 2189, 2210, 2359, 2498
BmiI	GGNNCC	7 cut(s)	16, 246, 1630, 2009, 2010, 2065, 2211
BmrFI	CCNGG	6 cut(s)	134, 242, 437, 1074, 2112, 2779
BmrI	ACTGGG	1 cut(s)	2740
BmsI	GCATC	4 cut(s)	409, 710, 2395, 2780
BmuI	ACTGGG	1 cut(s)	2740
BoxI	GACNNNNGTC	1 cut(s)	2592
BpiI	GAAGAC	3 cut(s)	1803, 1860, 2648
BplI	GAGNNNNNCTC	2 cut(s)	715, 747
BpmI	CTGGAG	3 cut(s)	1510, 1706, 2298
Bpu10I	CCTNAGC	2 cut(s)	696, 2793
BpuEI	CTTGAG	3 cut(s)	134, 398, 1802
BpuMI	CCSGG	1 cut(s)	437
BsaAI	YACGTR	2 cut(s)	198, 818
BsaBI	GATNNNNATC	1 cut(s)	1566
BsaHI	GRCGYC	4 cut(s)	245, 285, 432, 453
BsaI	GGTCTC	2 cut(s)	349, 1743
BsaJI	CCNNGG	8 cut(s)	138, 240, 656, 793, 2111, 2256, 2724, 2778
BsaWI	WCCGGW	1 cut(s)	1368
BsaXI	ACNNNNNCTCC	2 cut(s)	272, 302
Bse118I	RCCGGY	2 cut(s)	31, 712
Bse1I	ACTGG	4 cut(s)	1155, 1584, 1918, 2735
Bse3DI	GCAATG	4 cut(s)	390, 851, 959, 2406
Bse8I	GATNNNNATC	1 cut(s)	1566
BseBI	CCWGG	5 cut(s)	134, 242, 1074, 2112, 2779
BseDI	CCNNGG	8 cut(s)	138, 240, 656, 793, 2111, 2256, 2724, 2778
BseGI	GGATG	5 cut(s)	231, 424, 2122, 2410, 2774
BseJI	GATNNNNATC	1 cut(s)	1566
BseMI	GCAATG	4 cut(s)	390, 851, 959, 2406
BseMII	CTCAG	5 cut(s)	746, 1026, 2025, 2529, 2807
BseNI	ACTGG	4 cut(s)	1155, 1584, 1918, 2735
BseRI	GAGGAG	2 cut(s)	82, 257
BseSI	GKGCMC	1 cut(s)	2012
BseXI	GCAGC	5 cut(s)	82, 88, 836, 839, 1693
BseYI	CCCAGC	1 cut(s)	983
BsgI	GTGCAG	2 cut(s)	1614, 2783
Bsh1236I	CGCG	2 cut(s)	443, 450
Bsh1285I	CGRYCG	1 cut(s)	190
BshFI	GGCC	7 cut(s)	137, 255, 554, 2010, 2212, 2361, 2435
BshNI	GGYRCC	1 cut(s)	244
BsiEI	CGRYCG	1 cut(s)	190
BsiHKAI	GWGCWC	2 cut(s)	150, 2631
BsiHKCI	CYCGRG	3 cut(s)	221, 905, 2723
BsiSI	CCGG	9 cut(s)	12, 32, 248, 429, 436, 713, 1369, 1992, 2747
BslFI	GGGAC	2 cut(s)	452, 2016
BsmAI	GTCTC	8 cut(s)	186, 349, 735, 1027, 1032, 1684, 1743, 2522
BsmBI	CGTCTC	1 cut(s)	1032
BsmFI	GGGAC	2 cut(s)	452, 2016
BsmI	GAATGC	2 cut(s)	794, 856
BsnI	GGCC	7 cut(s)	137, 255, 554, 2010, 2212, 2361, 2435
Bso31I	GGTCTC	2 cut(s)	349, 1743
BsoBI	CYCGRG	3 cut(s)	221, 905, 2723
Bsp120I	GGGCCC	1 cut(s)	2008
Bsp1286I	GDGCHC	3 cut(s)	150, 2012, 2631
Bsp19I	CCATGG	1 cut(s)	138
BspANI	GGCC	7 cut(s)	137, 255, 554, 2010, 2212, 2361, 2435
BspCNI	CTCAG	5 cut(s)	745, 1027, 2026, 2530, 2806
BspFNI	CGCG	2 cut(s)	443, 450
BspHI	TCATGA	3 cut(s)	784, 1471, 1741
BspLI	GGNNCC	7 cut(s)	16, 246, 1630, 2009, 2010, 2065, 2211
BspMAI	CTGCAG	1 cut(s)	2335
BspMI	ACCTGC	1 cut(s)	1586
BspPI	GGATC	8 cut(s)	290, 668, 1411, 1623, 1636, 2647, 2724, 2757
BspQI	GCTCTTC	1 cut(s)	2415
BspT107I	GGYRCC	1 cut(s)	244
BspTNI	GGTCTC	2 cut(s)	349, 1743
BsrBI	CCGCTC	2 cut(s)	1538, 2368
BsrDI	GCAATG	4 cut(s)	390, 851, 959, 2406
BsrFI	RCCGGY	2 cut(s)	31, 712
BsrI	ACTGG	4 cut(s)	1155, 1584, 1918, 2735
BssAI	RCCGGY	2 cut(s)	31, 712
BssECI	CCNNGG	8 cut(s)	138, 240, 656, 793, 2111, 2256, 2724, 2778
BssNAI	GTATAC	1 cut(s)	1455
BssNI	GRCGYC	4 cut(s)	245, 285, 432, 453
BssT1I	CCWWGG	4 cut(s)	138, 656, 793, 2256
Bst1107I	GTATAC	1 cut(s)	1455
Bst2UI	CCWGG	5 cut(s)	134, 242, 1074, 2112, 2779
Bst4CI	ACNGT	3 cut(s)	591, 901, 1424
Bst6I	CTCTTC	5 cut(s)	100, 1828, 1924, 2302, 2415
BstACI	GRCGYC	4 cut(s)	245, 285, 432, 453
BstAPI	GCANNNNNTGC	2 cut(s)	1678, 2405
BstBAI	YACGTR	2 cut(s)	198, 818
BstC8I	GCNNGC	9 cut(s)	257, 332, 336, 445, 464, 2165, 2169, 2235, 2550
BstDEI	CTNAG	7 cut(s)	600, 696, 732, 1035, 2034, 2538, 2793
BstDSI	CCRYGG	1 cut(s)	138
BstEII	GGTNACC	1 cut(s)	2124
BstENI	CCTNNNNNAGG	1 cut(s)	731
BstF5I	GGATG	5 cut(s)	231, 424, 2122, 2410, 2774
BstFNI	CGCG	2 cut(s)	443, 450
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	4 cut(s)	247, 475, 617, 751
BstMAI	GTCTC	8 cut(s)	186, 349, 735, 1027, 1032, 1684, 1743, 2522
BstMCI	CGRYCG	1 cut(s)	190
BstMWI	GCNNNNNNNGC	8 cut(s)	70, 73, 76, 472, 798, 1175, 1678, 2405
BstNI	CCWGG	5 cut(s)	134, 242, 1074, 2112, 2779
BstNSI	RCATGY	5 cut(s)	1298, 1717, 1988, 2032, 2552
BstPAI	GACNNNNGTC	1 cut(s)	2592
BstPI	GGTNACC	1 cut(s)	2124
BstSCI	CCNGG	6 cut(s)	132, 240, 435, 1072, 2110, 2777
BstSFI	CTRYAG	3 cut(s)	2097, 2331, 2454
BstSLI	GKGCMC	1 cut(s)	2012
BstUI	CGCG	2 cut(s)	443, 450
BstV1I	GCAGC	5 cut(s)	82, 88, 836, 839, 1693
BstV2I	GAAGAC	3 cut(s)	1803, 1860, 2648
BstX2I	RGATCY	8 cut(s)	217, 660, 1403, 1628, 2021, 2300, 2639, 2716
BstXI	CCANNNNNNTGG	1 cut(s)	1979
BstYI	RGATCY	8 cut(s)	217, 660, 1403, 1628, 2021, 2300, 2639, 2716
BstZ17I	GTATAC	1 cut(s)	1455
BsuI	GTATCC	1 cut(s)	2422
BsuRI	GGCC	7 cut(s)	137, 255, 554, 2010, 2212, 2361, 2435
BtgI	CCRYGG	1 cut(s)	138
BtgZI	GCGATG	1 cut(s)	687
BtsCI	GGATG	5 cut(s)	231, 424, 2122, 2410, 2774
BtsIMutI	CAGTG	4 cut(s)	587, 1162, 1911, 2661
BveI	ACCTGC	1 cut(s)	1586
Cac8I	GCNNGC	9 cut(s)	257, 332, 336, 445, 464, 2165, 2169, 2235, 2550
CaiI	CAGNNNCTG	3 cut(s)	830, 1136, 2537
CciI	TCATGA	3 cut(s)	784, 1471, 1741
CfoI	GCGC	4 cut(s)	247, 475, 617, 751
Cfr10I	RCCGGY	2 cut(s)	31, 712
Cfr13I	GGNCC	9 cut(s)	14, 253, 2008, 2009, 2108, 2189, 2210, 2359, 2498
CseI	GACGC	4 cut(s)	293, 421, 449, 461
Csp6I	GTAC	2 cut(s)	199, 478
CspCI	CAANNNNNGTGG	4 cut(s)	1138, 1173, 2253, 2288
CviQI	GTAC	2 cut(s)	199, 478
DdeI	CTNAG	7 cut(s)	600, 696, 732, 1035, 2034, 2538, 2793
DinI	GGCGCC	1 cut(s)	246
DrdI	GACNNNNNNGTC	2 cut(s)	1019, 1698
DriI	GACNNNNNGTC	1 cut(s)	508
DseDI	GACNNNNNNGTC	2 cut(s)	1019, 1698
EaeI	YGGCCR	2 cut(s)	135, 552
Eam1104I	CTCTTC	5 cut(s)	100, 1828, 1924, 2302, 2415
Eam1105I	GACNNNNNGTC	1 cut(s)	508
EarI	CTCTTC	5 cut(s)	100, 1828, 1924, 2302, 2415
EciI	GGCGGA	1 cut(s)	280
Ecl136II	GAGCTC	1 cut(s)	148
Eco130I	CCWWGG	4 cut(s)	138, 656, 793, 2256
Eco24I	GRGCYC	2 cut(s)	150, 2012
Eco31I	GGTCTC	2 cut(s)	349, 1743
Eco32I	GATATC	1 cut(s)	2467
Eco47I	GGWCC	4 cut(s)	14, 2108, 2189, 2498
Eco53kI	GAGCTC	1 cut(s)	148
Eco57I	CTGAAG	2 cut(s)	1113, 1644
Eco88I	CYCGRG	3 cut(s)	221, 905, 2723
Eco91I	GGTNACC	1 cut(s)	2124
EcoICRI	GAGCTC	1 cut(s)	148
EcoNI	CCTNNNNNAGG	1 cut(s)	731
EcoO109I	RGGNCCY	5 cut(s)	253, 2008, 2009, 2210, 2498
EcoO65I	GGTNACC	1 cut(s)	2124
EcoRI	GAATTC	3 cut(s)	1226, 1947, 2383
EcoRII	CCWGG	5 cut(s)	132, 240, 1072, 2110, 2777
EcoRV	GATATC	1 cut(s)	2467
EcoT14I	CCWWGG	4 cut(s)	138, 656, 793, 2256
EcoT38I	GRGCYC	2 cut(s)	150, 2012
EgeI	GGCGCC	1 cut(s)	246
EheI	GGCGCC	1 cut(s)	246
ErhI	CCWWGG	4 cut(s)	138, 656, 793, 2256
Esp3I	CGTCTC	1 cut(s)	1032
FalI	AAGNNNNNCTT	2 cut(s)	1617, 1649
FaqI	GGGAC	2 cut(s)	452, 2016
FauI	CCCGC	4 cut(s)	313, 633, 1162, 1727
FauNDI	CATATG	2 cut(s)	1954, 2056
FbaI	TGATCA	1 cut(s)	2149
FblI	GTMKAC	5 cut(s)	609, 1291, 1454, 1876, 2453
FokI	GGATG	5 cut(s)	218, 431, 2129, 2417, 2761
FriOI	GRGCYC	2 cut(s)	150, 2012
FspBI	CTAG	3 cut(s)	1499, 1872, 2298
GlaI	GCGC	4 cut(s)	246, 474, 616, 750
GsaI	CCCAGC	1 cut(s)	987
GsuI	CTGGAG	3 cut(s)	1510, 1706, 2298
HaeII	RGCGCY	1 cut(s)	248
HaeIII	GGCC	7 cut(s)	137, 255, 554, 2010, 2212, 2361, 2435
HapII	CCGG	9 cut(s)	12, 32, 248, 429, 436, 713, 1369, 1992, 2747
HgaI	GACGC	4 cut(s)	293, 421, 449, 461
HhaI	GCGC	4 cut(s)	247, 475, 617, 751
Hin1I	GRCGYC	4 cut(s)	245, 285, 432, 453
Hin6I	GCGC	4 cut(s)	245, 473, 615, 749
HinP1I	GCGC	4 cut(s)	245, 473, 615, 749
HincII	GTYRAC	1 cut(s)	1619
HindII	GTYRAC	1 cut(s)	1619
HindIII	AAGCTT	3 cut(s)	757, 2235, 2700
HpaII	CCGG	9 cut(s)	12, 32, 248, 429, 436, 713, 1369, 1992, 2747
HphI	GGTGA	7 cut(s)	45, 157, 358, 1088, 2118, 2216, 2432
Hpy166II	GTNNAC	7 cut(s)	610, 1292, 1455, 1619, 1877, 2075, 2454
Hpy8I	GTNNAC	7 cut(s)	610, 1292, 1455, 1619, 1877, 2075, 2454
Hpy99I	CGWCG	3 cut(s)	215, 287, 455
HpyAV	CCTTC	5 cut(s)	478, 1619, 2086, 2223, 2729
HpyCH4III	ACNGT	3 cut(s)	591, 901, 1424
HpyCH4IV	ACGT	2 cut(s)	197, 817
HpyF10VI	GCNNNNNNNGC	8 cut(s)	70, 73, 76, 472, 798, 1175, 1678, 2405
HpyF3I	CTNAG	7 cut(s)	600, 696, 732, 1035, 2034, 2538, 2793
HpySE526I	ACGT	2 cut(s)	197, 817
Hsp92I	GRCGYC	4 cut(s)	245, 285, 432, 453
HspAI	GCGC	4 cut(s)	245, 473, 615, 749
KasI	GGCGCC	1 cut(s)	244
Ksp22I	TGATCA	1 cut(s)	2149
LguI	GCTCTTC	1 cut(s)	2415
LmnI	GCTCC	5 cut(s)	145, 270, 740, 1009, 1094
Lsp1109I	GCAGC	5 cut(s)	82, 88, 836, 839, 1693
LweI	GCATC	4 cut(s)	409, 710, 2395, 2780
MaeI	CTAG	3 cut(s)	1499, 1872, 2298
MaeII	ACGT	2 cut(s)	197, 817
MaeIII	GTNAC	5 cut(s)	1424, 1916, 2124, 2156, 2707
MbiI	CCGCTC	2 cut(s)	1538, 2368
MfeI	CAATTG	1 cut(s)	1673
MflI	RGATCY	8 cut(s)	217, 660, 1403, 1628, 2021, 2300, 2639, 2716
MhlI	GDGCHC	3 cut(s)	150, 2012, 2631
MlsI	TGGCCA	1 cut(s)	137
MluI	ACGCGT	1 cut(s)	441
MluNI	TGGCCA	1 cut(s)	137
Mly113I	GGCGCC	1 cut(s)	245
MlyI	GAGTC	4 cut(s)	329, 917, 1517, 1586
MmeI	TCCRAC	3 cut(s)	210, 718, 2075
Mox20I	TGGCCA	1 cut(s)	137
MroXI	GAANNNNTTC	2 cut(s)	886, 2265
MscI	TGGCCA	1 cut(s)	137
MseI	TTAA	3 cut(s)	675, 930, 1202
Msp20I	TGGCCA	1 cut(s)	137
MspA1I	CMGCKG	2 cut(s)	830, 1684
MspI	CCGG	9 cut(s)	12, 32, 248, 429, 436, 713, 1369, 1992, 2747
MspR9I	CCNGG	6 cut(s)	134, 242, 437, 1074, 2112, 2779
MunI	CAATTG	1 cut(s)	1673
Mva1269I	GAATGC	2 cut(s)	794, 856
MvaI	CCWGG	5 cut(s)	134, 242, 1074, 2112, 2779
MvnI	CGCG	2 cut(s)	443, 450
MwoI	GCNNNNNNNGC	8 cut(s)	70, 73, 76, 472, 798, 1175, 1678, 2405
NarI	GGCGCC	1 cut(s)	245
NciI	CCSGG	1 cut(s)	437
NcoI	CCATGG	1 cut(s)	138
NdeI	CATATG	2 cut(s)	1954, 2056
NlaIV	GGNNCC	7 cut(s)	16, 246, 1630, 2009, 2010, 2065, 2211
NmeAIII	GCCGAG	1 cut(s)	580
NmuCI	GTSAC	1 cut(s)	2124
NspI	RCATGY	5 cut(s)	1298, 1717, 1988, 2032, 2552
PaeI	GCATGC	1 cut(s)	2552
PaeR7I	CTCGAG	2 cut(s)	221, 905
PagI	TCATGA	3 cut(s)	784, 1471, 1741
PciI	ACATGT	3 cut(s)	1294, 1984, 2028
PciSI	GCTCTTC	1 cut(s)	2415
PcsI	WCGNNNNNNNCGW	3 cut(s)	219, 291, 447
PctI	GAATGC	2 cut(s)	794, 856
PdmI	GAANNNNTTC	2 cut(s)	886, 2265
PfeI	GAWTC	8 cut(s)	159, 425, 1133, 1145, 2371, 2605, 2689, 2784
PflMI	CCANNNNNTGG	3 cut(s)	241, 760, 2057
PfoI	TCCNGGA	1 cut(s)	435
PleI	GAGTC	4 cut(s)	328, 916, 1517, 1585
PluTI	GGCGCC	1 cut(s)	248
PpsI	GAGTC	4 cut(s)	328, 916, 1517, 1585
Ppu21I	YACGTR	2 cut(s)	198, 818
PpuMI	RGGWCCY	1 cut(s)	2498
PscI	ACATGT	3 cut(s)	1294, 1984, 2028
PshAI	GACNNNNGTC	1 cut(s)	2592
Psp124BI	GAGCTC	1 cut(s)	150
Psp5II	RGGWCCY	1 cut(s)	2498
Psp6I	CCWGG	5 cut(s)	132, 240, 1072, 2110, 2777
PspEI	GGTNACC	1 cut(s)	2124
PspFI	CCCAGC	1 cut(s)	983
PspGI	CCWGG	5 cut(s)	132, 240, 1072, 2110, 2777
PspN4I	GGNNCC	7 cut(s)	16, 246, 1630, 2009, 2010, 2065, 2211
PspOMI	GGGCCC	1 cut(s)	2008
PspPI	GGNCC	9 cut(s)	14, 253, 2008, 2009, 2108, 2189, 2210, 2359, 2498
PspPPI	RGGWCCY	1 cut(s)	2498
PspXI	VCTCGAGB	1 cut(s)	905
PstI	CTGCAG	1 cut(s)	2335
PstNI	CAGNNNCTG	3 cut(s)	830, 1136, 2537
PsuI	RGATCY	8 cut(s)	217, 660, 1403, 1628, 2021, 2300, 2639, 2716
PvuII	CAGCTG	2 cut(s)	830, 1684
RsaI	GTAC	2 cut(s)	200, 479
RsaNI	GTAC	2 cut(s)	199, 478
SacI	GAGCTC	1 cut(s)	150
SapI	GCTCTTC	1 cut(s)	2415
SaqAI	TTAA	3 cut(s)	675, 930, 1202
Sau96I	GGNCC	9 cut(s)	14, 253, 2008, 2009, 2108, 2189, 2210, 2359, 2498
ScaI	AGTACT	1 cut(s)	479
SchI	GAGTC	4 cut(s)	329, 917, 1517, 1586
ScrFI	CCNGG	6 cut(s)	134, 242, 437, 1074, 2112, 2779
SduI	GDGCHC	3 cut(s)	150, 2012, 2631
SfaNI	GCATC	4 cut(s)	409, 710, 2395, 2780
SfcI	CTRYAG	3 cut(s)	2097, 2331, 2454
SfoI	GGCGCC	1 cut(s)	246
Sfr274I	CTCGAG	2 cut(s)	221, 905
SinI	GGWCC	4 cut(s)	14, 2108, 2189, 2498
SlaI	CTCGAG	2 cut(s)	221, 905
SmlI	CTYRAG	5 cut(s)	149, 221, 413, 905, 1781
SmoI	CTYRAG	5 cut(s)	149, 221, 413, 905, 1781
SphI	GCATGC	1 cut(s)	2552
SspDI	GGCGCC	1 cut(s)	244
SspMI	CTAG	3 cut(s)	1499, 1872, 2298
SstI	GAGCTC	1 cut(s)	150
StyD4I	CCNGG	6 cut(s)	132, 240, 435, 1072, 2110, 2777
StyI	CCWWGG	4 cut(s)	138, 656, 793, 2256
TaaI	ACNGT	3 cut(s)	591, 901, 1424
TaiI	ACGT	2 cut(s)	200, 820
TaqI	TCGA	9 cut(s)	125, 213, 222, 722, 860, 906, 1850, 2087, 2631
TaqII	GACCGA	2 cut(s)	204, 2642
TatI	WGTACW	1 cut(s)	477
TauI	GCSGC	5 cut(s)	67, 70, 76, 450, 587
TfiI	GAWTC	8 cut(s)	159, 425, 1133, 1145, 2371, 2605, 2689, 2784
Tru1I	TTAA	3 cut(s)	675, 930, 1202
Tru9I	TTAA	3 cut(s)	675, 930, 1202
TscAI	CASTG	4 cut(s)	594, 1162, 1918, 2668
TseFI	GTSAC	1 cut(s)	2124
TseI	GCWGC	6 cut(s)	70, 76, 824, 827, 1681, 2797
Tsp45I	GTSAC	1 cut(s)	2124
TspRI	CASTG	4 cut(s)	594, 1162, 1918, 2668
Van91I	CCANNNNNTGG	3 cut(s)	241, 760, 2057
VpaK11BI	GGWCC	4 cut(s)	14, 2108, 2189, 2498
XagI	CCTNNNNNAGG	1 cut(s)	731
XapI	RAATTY	6 cut(s)	21, 1063, 1226, 1348, 1947, 2383
XbaI	TCTAGA	1 cut(s)	2297
XceI	RCATGY	5 cut(s)	1298, 1717, 1988, 2032, 2552
XhoI	CTCGAG	2 cut(s)	221, 905
XmiI	GTMKAC	5 cut(s)	609, 1291, 1454, 1876, 2453
XmnI	GAANNNNTTC	2 cut(s)	886, 2265
XspI	CTAG	3 cut(s)	1499, 1872, 2298
ZrmI	AGTACT	1 cut(s)	479

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.