Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0010418

Physical Location & Seq

Genomic Coordinates Reverse (-)

28252760 .. 28259591

Gene Structure 6832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g25430.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCTGCACCGCCGCCAAGCAGCAGCCGCCTCCGTGGTATGTTGCAGGCCTCAGTCCAATATGTCCAATGGACTTACAGTCTCTTCTGGCAAATCTGTCCCCAACAAGGGATCTTAGTATGGTCAGATGGGTACTATAATGGAGCCATCAAGACGAGGAAGACGGTGCAACCAATGGAAGTGAGTGCCGAGGAGGCATCTCTCCAGAGGAGCCAGCAACTCAGAGAACTCTACGACTCTTTGTCCGCTGGAGAGACAAACCAGCCCCCAGCACGCCGCCCTTGCGCTTCCTTGTCCCCGGAGGACTTAACCGAATCCGAATGGTTCTACTTGATGTGTGTCTCATTCTCCTTTCCCCCCGGCGTCGGGTTGCCAGGGAAAGCATACGCAAGGAGGCAGCATGTATGGCTCACCGGTGCAAACGAGGTCGATAGCAAAACCTTTTCCAGAGCTATTTTGGCAAAGAGTGCTCGTATACAGACCGTAGTGTGCATTCCTCTTCTAGATGGCGTCGTAGAATTTGGCACCACAGAGAGGGTTCCAGAAGACCACGCCTTAGTCGAACACGTCAAAACCTTCTTCGTTGACCACCACCACCCTCCGCCACCAAAACCCGCCCTCTCCGAGCACTCCACATCCAACCCCGCCACCTCATCCGATCACCCACATTTCCACTCTCCGCACCTTCTCCAGACCATGTGCACCAACCCTCCTCTCAACGCCGCCCAAGAAGACGAAGAGGACGAAGAAGAAGATGATAATCAGGAGGAGGACGACGGAGGAGACGAGTCCGACTCCGAAGCCGAAACGGGTCGCAATGGTGGAGCCGTTGTTCCCGCCGCAAACCCTCCTCAGGTTTTGGCCGCGGTAGCCGAGCCAAGCGAGCTCATGCAACTCGAGATGTCCGAAGACATCCGGCTGGGCTCCCCGGACGATGCCTCAAATAACTTGGACTCTGATTTCCACTTGTTAGCTGTGAGTCAGTCTAGGAACCCAGCGGATCAGCAGAGACAAGCTGACTCGTATCGAGCCGAGTCGACCAGGCGGTGTCCGTCAGTACAAGAGCCGCTGAGCAGTGGCCTTCAACCGCCGCACACAGGACCCCTAGCTTTAGAGGAGTTGACACATGATGACGACACACATTATTCGGAGACGGTCTCCACCATACTGCAGGGACAAGCGACTCGGTGGATGGATTCATCGTCCACCAACTACACAGCTTGCTTGACTCAGTCGGCTTTCGCCAAGTGGTCGAGCCGGGTTGATCACCACTTTCTCATGCCGGTTGAGGGCACGTCTCAATGGCTCTTGAAATATATTTTATTCAGTGTACCGTTCCTCCACTCAAAATATCGCGACGAAAACTCGCCAAAATCTCAAGAGGGCGAAGGCTCGACGCGGTTGAGGAAAGGGACCCCACAAGACGAGCTCAGTGCCAATCATGTGTTAGCGGAACGACGTCGTAGAGAGAAGCTTAATGAGAGGTTTATTATACTAAGGTCCCTAGTGCCTTTTGTGACAAAAATGGACAAGGCTTCGATATTAGGGGACACAATCGAGTATGTGAAGCAACTGCGTAACAAAATTCAGGATCTCGAGGCACGTAACATGCTGATGGAGGAAGATCAACGATCGAGATCATCCGGGGAAATGCAAAGGTCCAGTAGTTGTAAAGAGTTGCGAAGTGGGCTCACGGTAGTGGAGCGGACCCAAGGAGGTCCACCGGGGTCCGATAAAAGGAAGTTGAGGATTGTGGAGGGAAGCGGCGGTGTCGCCATTGGTAAGGCTAAAGTAATGGAGGACTCACCGCCTCCACCGCCCCCGCCACCACCTCAGCCAGAACCTTCACCGACACCTATGGTGACGGGGACTTCTCTAGAGGTGTCGATAATCGAGAGTGATGGGCTGTTGGAGCTCCAATGCCCGTATAGAGAAGGGTTATTGCTTGATGTGATGCAAACACTTAGGGAGCTAAGAATTGAGACCACGGTGGTCCAGTCCTCATTGAATAACGGATTCTTCGTAGCTGAACTAAGAGCCAAGGTGAAGGATAACGTGAGTGGCAAGAAAGTAAGTATTACGGAAGTGAAGAGGGTGATAAATCAAATTATACCCCAATCTGACTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

710

Amino Acids

78.65

Weight (kDa)

5.17

Isoelectric Point (pI)

68.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09820
fragaria_vesca	FvH4_2g23700 FvH4_2g23700 FvH4_2g23700
malus_domestica	MD03G1266300.v1.1 MD11G1286900.v1.1
prunus_persica	Prupe.8G242100_v2.0.a1 Prupe.8G242100_v2.0.a1
pyrus_communis	pycom03g21290 pycom11g25430
rosa_chinensis	RchiOBHm_Chr6g0291161
rosa_laevigata	RLG00000012139
rosa_multiflora	Rmu_sc0004642.1_g000024
rosa_roxburghii	Rroxscaffold_7G00176330
rosa_rugosa	Rorug06G0218000 Rorug06G0218100
rosa_samantha	Rh6AG328500 Rh6BG336100 Rh6CG342100 Rh6DG329400
rosa_wichuraiana	Rw6G028580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1462
AccB1I	GGYRCC	1 cut(s)	524
AccBSI	CCGCTC	1 cut(s)	1705
AccI	GTMKAC	2 cut(s)	475, 1037
AccII	CGCG	3 cut(s)	866, 1356, 1399
AclWI	GGATC	3 cut(s)	119, 1008, 1599
AcoI	YGGCCR	1 cut(s)	861
AcsI	RAATTY	2 cut(s)	518, 1584
AcyI	GRCGYC	3 cut(s)	363, 510, 1459
AfaI	GTAC	3 cut(s)	134, 1059, 1332
AfiI	CCNNNNNNNGG	9 cut(s)	107, 108, 365, 366, 534, 853, 1097, 1289, 1737
AflIII	ACRYGT	1 cut(s)	565
AgeI	ACCGGT	1 cut(s)	413
AgsI	TTSAA	3 cut(s)	1085, 1312, 2008
AhdI	GACNNNNNGTC	2 cut(s)	78, 241
AjiI	CACGTC	2 cut(s)	568, 1296
AjnI	CCWGG	2 cut(s)	373, 1040
AleI	CACNNNNGTG	1 cut(s)	1697
AloI	GAACNNNNNNTCC	2 cut(s)	816, 848
Alw21I	GWGCWC	6 cut(s)	472, 630, 704, 888, 1431, 1917
Alw26I	GTCTC	9 cut(s)	86, 248, 346, 777, 1003, 1145, 1162, 1302, 1976
Alw44I	GTGCAC	1 cut(s)	700
AlwI	GGATC	3 cut(s)	119, 1008, 1599
Ama87I	CYCGRG	2 cut(s)	896, 1595
AoxI	GGCC	3 cut(s)	48, 861, 1078
ApaLI	GTGCAC	1 cut(s)	700
ApeKI	GCWGC	4 cut(s)	5, 21, 24, 397
ApoI	RAATTY	2 cut(s)	518, 1584
AsiGI	ACCGGT	1 cut(s)	413
AspLEI	GCGC	1 cut(s)	287
AspS9I	GGNCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
AsuC2I	CCSGG	6 cut(s)	299, 360, 929, 1259, 1645, 1725
AsuHPI	GGTGA	8 cut(s)	403, 653, 1259, 1797, 1839, 1873, 2056, 2107
AvaI	CYCGRG	2 cut(s)	896, 1595
AvaII	GGWCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
AxyI	CCTNAGG	1 cut(s)	852
BaeGI	GKGCMC	2 cut(s)	704, 1295
BanI	GGYRCC	1 cut(s)	524
BanII	GRGCYC	5 cut(s)	888, 926, 1431, 1692, 1917
BbsI	GAAGAC	4 cut(s)	167, 552, 738, 915
Bbv12I	GWGCWC	6 cut(s)	472, 630, 704, 888, 1431, 1917
BbvCI	CCTCAGC	1 cut(s)	1833
BbvI	GCAGC	3 cut(s)	33, 36, 409
BccI	CCATC	6 cut(s)	122, 155, 500, 1186, 1609, 1895
BceAI	ACGGC	1 cut(s)	812
BcgI	CGANNNNNNTGC	2 cut(s)	1415, 1449
BciT130I	CCWGG	2 cut(s)	375, 1042
BclI	TGATCA	1 cut(s)	1264
BcnI	CCSGG	6 cut(s)	299, 360, 929, 1259, 1645, 1725
BcoDI	GTCTC	9 cut(s)	86, 248, 346, 777, 1003, 1145, 1162, 1302, 1976
BfaI	CTAG	5 cut(s)	503, 987, 1106, 1505, 1877
BfmI	CTRYAG	1 cut(s)	1169
BglI	GCCNNNNNGGC	1 cut(s)	194
BlpI	GCTNAGC	1 cut(s)	1070
Bme1390I	CCNGG	8 cut(s)	299, 360, 375, 929, 1042, 1259, 1645, 1725
Bme18I	GGWCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
BmeRI	GACNNNNNGTC	2 cut(s)	78, 241
BmeT110I	CYCGRG	2 cut(s)	896, 1595
BmgBI	CACGTC	2 cut(s)	568, 1296
BmgT120I	GGNCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
BmrFI	CCNGG	8 cut(s)	299, 360, 375, 929, 1042, 1259, 1645, 1725
BmsI	GCATC	3 cut(s)	206, 925, 1944
BpiI	GAAGAC	4 cut(s)	167, 552, 738, 915
BplI	GAGNNNNNCTC	4 cut(s)	779, 811, 1142, 1174
BpmI	CTGGAG	3 cut(s)	188, 270, 674
Bpu10I	CCTNAGC	1 cut(s)	1833
Bpu1102I	GCTNAGC	1 cut(s)	1070
BpuEI	CTTGAG	1 cut(s)	1362
BpuMI	CCSGG	6 cut(s)	299, 360, 929, 1259, 1645, 1725
BsaAI	YACGTR	1 cut(s)	1604
BsaBI	GATNNNNATC	2 cut(s)	759, 1636
BsaHI	GRCGYC	3 cut(s)	363, 510, 1459
BsaI	GGTCTC	2 cut(s)	1162, 1976
BsaWI	WCCGGW	1 cut(s)	413
BsaXI	ACNNNNNCTCC	6 cut(s)	694, 724, 816, 846, 1323, 1353
Bsc4I	CCNNNNNNNGG	9 cut(s)	107, 108, 365, 366, 534, 853, 1097, 1289, 1737
Bse118I	RCCGGY	2 cut(s)	413, 1282
Bse1I	ACTGG	2 cut(s)	1662, 1996
Bse21I	CCTNAGG	1 cut(s)	852
Bse3DI	GCAATG	1 cut(s)	823
Bse8I	GATNNNNATC	2 cut(s)	759, 1636
BseBI	CCWGG	2 cut(s)	375, 1042
BseGI	GGATG	5 cut(s)	635, 653, 912, 1197, 1640
BseJI	GATNNNNATC	2 cut(s)	759, 1636
BseLI	CCNNNNNNNGG	9 cut(s)	107, 108, 365, 366, 534, 853, 1097, 1289, 1737
BseMI	GCAATG	1 cut(s)	823
BseMII	CTCAG	7 cut(s)	66, 235, 866, 1061, 1244, 1444, 1847
BseNI	ACTGG	2 cut(s)	1662, 1996
BseRI	GAGGAG	7 cut(s)	206, 223, 702, 782, 795, 840, 1130
BseSI	GKGCMC	2 cut(s)	704, 1295
BseXI	GCAGC	3 cut(s)	33, 36, 409
BseYI	CCCAGC	3 cut(s)	268, 919, 994
Bsh1236I	CGCG	3 cut(s)	866, 1356, 1399
Bsh1285I	CGRYCG	1 cut(s)	1634
BshFI	GGCC	3 cut(s)	50, 863, 1080
BshNI	GGYRCC	1 cut(s)	524
BshTI	ACCGGT	1 cut(s)	413
BsiEI	CGRYCG	1 cut(s)	1634
BsiHKAI	GWGCWC	6 cut(s)	472, 630, 704, 888, 1431, 1917
BsiHKCI	CYCGRG	2 cut(s)	896, 1595
BsiSI	CCGG	9 cut(s)	299, 360, 414, 916, 929, 1258, 1283, 1644, 1724
BslFI	GGGAC	7 cut(s)	84, 280, 1188, 1426, 1486, 1562, 1882
BslI	CCNNNNNNNGG	9 cut(s)	107, 108, 365, 366, 534, 853, 1097, 1289, 1737
BsmAI	GTCTC	9 cut(s)	86, 248, 346, 777, 1003, 1145, 1162, 1302, 1976
BsmBI	CGTCTC	3 cut(s)	777, 1145, 1302
BsmFI	GGGAC	7 cut(s)	84, 280, 1188, 1426, 1486, 1562, 1882
BsmI	GAATGC	1 cut(s)	492
BsnI	GGCC	3 cut(s)	50, 863, 1080
Bso31I	GGTCTC	2 cut(s)	1162, 1976
BsoBI	CYCGRG	2 cut(s)	896, 1595
Bsp1286I	GDGCHC	9 cut(s)	472, 630, 704, 888, 926, 1295, 1431, 1692, 1917
Bsp143I	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
Bsp1720I	GCTNAGC	1 cut(s)	1070
Bsp68I	TCGCGA	1 cut(s)	1356
BspANI	GGCC	3 cut(s)	50, 863, 1080
BspCNI	CTCAG	7 cut(s)	65, 234, 865, 1062, 1243, 1443, 1846
BspFNI	CGCG	3 cut(s)	866, 1356, 1399
BspMAI	CTGCAG	1 cut(s)	1173
BspPI	GGATC	3 cut(s)	119, 1008, 1599
BspT107I	GGYRCC	1 cut(s)	524
BspTNI	GGTCTC	2 cut(s)	1162, 1976
BsrBI	CCGCTC	1 cut(s)	1705
BsrDI	GCAATG	1 cut(s)	823
BsrFI	RCCGGY	2 cut(s)	413, 1282
BsrI	ACTGG	2 cut(s)	1662, 1996
BssAI	RCCGGY	2 cut(s)	413, 1282
BssMI	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
BssNAI	GTATAC	1 cut(s)	476
BssNI	GRCGYC	3 cut(s)	363, 510, 1459
BssT1I	CCWWGG	2 cut(s)	1711, 2040
Bst1107I	GTATAC	1 cut(s)	476
Bst2UI	CCWGG	2 cut(s)	375, 1042
Bst4CI	ACNGT	7 cut(s)	80, 166, 484, 1156, 1335, 1696, 1990
Bst6I	CTCTTC	4 cut(s)	89, 504, 732, 2084
BstACI	GRCGYC	3 cut(s)	363, 510, 1459
BstAPI	GCANNNNNTGC	1 cut(s)	467
BstBAI	YACGTR	1 cut(s)	1604
BstC8I	GCNNGC	5 cut(s)	48, 215, 274, 884, 1222
BstDSI	CCRYGG	3 cut(s)	34, 864, 1986
BstF5I	GGATG	5 cut(s)	635, 653, 912, 1197, 1640
BstFNI	CGCG	3 cut(s)	866, 1356, 1399
BstHHI	GCGC	1 cut(s)	287
BstKTI	GATC	8 cut(s)	114, 661, 1003, 1267, 1594, 1627, 1634, 1640
BstMAI	GTCTC	9 cut(s)	86, 248, 346, 777, 1003, 1145, 1162, 1302, 1976
BstMBI	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
BstMCI	CGRYCG	1 cut(s)	1634
BstNI	CCWGG	2 cut(s)	375, 1042
BstNSI	RCATGY	2 cut(s)	404, 1612
BstSCI	CCNGG	8 cut(s)	297, 358, 373, 927, 1040, 1257, 1643, 1723
BstSFI	CTRYAG	1 cut(s)	1169
BstSLI	GKGCMC	2 cut(s)	704, 1295
BstUI	CGCG	3 cut(s)	866, 1356, 1399
BstV1I	GCAGC	3 cut(s)	33, 36, 409
BstV2I	GAAGAC	4 cut(s)	167, 552, 738, 915
BstX2I	RGATCY	2 cut(s)	111, 1591
BstYI	RGATCY	2 cut(s)	111, 1591
BstZ17I	GTATAC	1 cut(s)	476
Bsu36I	CCTNAGG	1 cut(s)	852
BsuRI	GGCC	3 cut(s)	50, 863, 1080
BtgI	CCRYGG	3 cut(s)	34, 864, 1986
BtrI	CACGTC	2 cut(s)	568, 1296
BtsCI	GGATG	5 cut(s)	635, 653, 912, 1197, 1640
BtsI	GCAGTG	1 cut(s)	1081
BtsIMutI	CAGTG	3 cut(s)	1081, 1333, 1438
BtuMI	TCGCGA	1 cut(s)	1356
Cac8I	GCNNGC	5 cut(s)	48, 215, 274, 884, 1222
CfoI	GCGC	1 cut(s)	287
Cfr10I	RCCGGY	2 cut(s)	413, 1282
Cfr13I	GGNCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
Cfr42I	CCGCGG	1 cut(s)	867
CseI	GACGC	3 cut(s)	352, 499, 1405
Csp6I	GTAC	3 cut(s)	133, 1058, 1331
CspAI	ACCGGT	1 cut(s)	413
CviAII	CATG	7 cut(s)	401, 697, 889, 1127, 1279, 1442, 1609
CviQI	GTAC	3 cut(s)	133, 1058, 1331
DpnI	GATC	8 cut(s)	113, 660, 1002, 1266, 1593, 1626, 1633, 1639
DpnII	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
DriI	GACNNNNNGTC	2 cut(s)	78, 241
EaeI	YGGCCR	1 cut(s)	861
Eam1104I	CTCTTC	4 cut(s)	89, 504, 732, 2084
Eam1105I	GACNNNNNGTC	2 cut(s)	78, 241
EarI	CTCTTC	4 cut(s)	89, 504, 732, 2084
EciI	GGCGGA	1 cut(s)	591
Ecl136II	GAGCTC	3 cut(s)	886, 1429, 1915
Eco130I	CCWWGG	2 cut(s)	1711, 2040
Eco147I	AGGCCT	1 cut(s)	50
Eco24I	GRGCYC	5 cut(s)	888, 926, 1431, 1692, 1917
Eco31I	GGTCTC	2 cut(s)	1162, 1976
Eco47I	GGWCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
Eco53kI	GAGCTC	3 cut(s)	886, 1429, 1915
Eco81I	CCTNAGG	1 cut(s)	852
Eco88I	CYCGRG	2 cut(s)	896, 1595
EcoICRI	GAGCTC	3 cut(s)	886, 1429, 1915
EcoO109I	RGGNCCY	3 cut(s)	1100, 1413, 1500
EcoRII	CCWGG	2 cut(s)	373, 1040
EcoT14I	CCWWGG	2 cut(s)	1711, 2040
EcoT38I	GRGCYC	5 cut(s)	888, 926, 1431, 1692, 1917
ErhI	CCWWGG	2 cut(s)	1711, 2040
Esp3I	CGTCTC	3 cut(s)	777, 1145, 1302
FaeI	CATG	7 cut(s)	404, 700, 892, 1130, 1282, 1445, 1612
FaqI	GGGAC	7 cut(s)	84, 280, 1188, 1426, 1486, 1562, 1882
FatI	CATG	7 cut(s)	400, 696, 888, 1126, 1278, 1441, 1608
FauI	CCCGC	4 cut(s)	622, 652, 844, 1830
FbaI	TGATCA	1 cut(s)	1264
FblI	GTMKAC	2 cut(s)	475, 1037
FokI	GGATG	5 cut(s)	622, 640, 899, 1204, 1627
FriOI	GRGCYC	5 cut(s)	888, 926, 1431, 1692, 1917
FspBI	CTAG	5 cut(s)	503, 987, 1106, 1505, 1877
GlaI	GCGC	1 cut(s)	286
GsaI	CCCAGC	3 cut(s)	272, 923, 998
GsuI	CTGGAG	3 cut(s)	188, 270, 674
HaeIII	GGCC	3 cut(s)	50, 863, 1080
HapII	CCGG	9 cut(s)	299, 360, 414, 916, 929, 1258, 1283, 1644, 1724
HgaI	GACGC	3 cut(s)	352, 499, 1405
HhaI	GCGC	1 cut(s)	287
Hin1I	GRCGYC	3 cut(s)	363, 510, 1459
Hin1II	CATG	7 cut(s)	404, 700, 892, 1130, 1282, 1445, 1612
Hin6I	GCGC	1 cut(s)	285
HinP1I	GCGC	1 cut(s)	285
HincII	GTYRAC	3 cut(s)	586, 1038, 1122
HindII	GTYRAC	3 cut(s)	586, 1038, 1122
HindIII	AAGCTT	1 cut(s)	1472
HpaII	CCGG	9 cut(s)	299, 360, 414, 916, 929, 1258, 1283, 1644, 1724
HphI	GGTGA	8 cut(s)	403, 653, 1259, 1797, 1839, 1873, 2056, 2107
Hpy166II	GTNNAC	8 cut(s)	476, 586, 702, 1038, 1122, 1206, 1331, 1721
Hpy8I	GTNNAC	8 cut(s)	476, 586, 702, 1038, 1122, 1206, 1331, 1721
Hpy99I	CGWCG	7 cut(s)	368, 515, 779, 1361, 1399, 1461, 1464
HpyAV	CCTTC	7 cut(s)	586, 695, 1091, 1382, 1854, 1928, 2041
HpyCH4III	ACNGT	7 cut(s)	80, 166, 484, 1156, 1335, 1696, 1990
HpyCH4IV	ACGT	5 cut(s)	567, 1295, 1459, 1603, 2055
HpySE526I	ACGT	5 cut(s)	567, 1295, 1459, 1603, 2055
Hsp92I	GRCGYC	3 cut(s)	363, 510, 1459
Hsp92II	CATG	7 cut(s)	404, 700, 892, 1130, 1282, 1445, 1612
HspAI	GCGC	1 cut(s)	285
KflI	GGGWCCC	1 cut(s)	1413
Ksp22I	TGATCA	1 cut(s)	1264
KspI	CCGCGG	1 cut(s)	867
Kzo9I	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
LmnI	GCTCC	8 cut(s)	143, 210, 824, 929, 1702, 1912, 1920, 1969
Lsp1109I	GCAGC	3 cut(s)	33, 36, 409
LweI	GCATC	3 cut(s)	206, 925, 1944
MaeI	CTAG	5 cut(s)	503, 987, 1106, 1505, 1877
MaeII	ACGT	5 cut(s)	567, 1295, 1459, 1603, 2055
MaeIII	GTNAC	4 cut(s)	1516, 1577, 1604, 1861
MalI	GATC	8 cut(s)	113, 660, 1002, 1266, 1593, 1626, 1633, 1639
MbiI	CCGCTC	1 cut(s)	1705
MboI	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
MflI	RGATCY	2 cut(s)	111, 1591
MhlI	GDGCHC	9 cut(s)	472, 630, 704, 888, 926, 1295, 1431, 1692, 1917
MluCI	AATT	4 cut(s)	518, 1584, 1977, 2106
MmeI	TCCRAC	3 cut(s)	663, 816, 1890
MseI	TTAA	3 cut(s)	308, 1476, 2128
MslI	CAYNNNNRTG	2 cut(s)	1613, 1697
MspA1I	CMGCKG	4 cut(s)	248, 866, 998, 1069
MspI	CCGG	9 cut(s)	299, 360, 414, 916, 929, 1258, 1283, 1644, 1724
MspR9I	CCNGG	8 cut(s)	299, 360, 375, 929, 1042, 1259, 1645, 1725
Mva1269I	GAATGC	1 cut(s)	492
MvaI	CCWGG	2 cut(s)	375, 1042
MvnI	CGCG	3 cut(s)	866, 1356, 1399
NciI	CCSGG	6 cut(s)	299, 360, 929, 1259, 1645, 1725
NdeII	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
NlaIII	CATG	7 cut(s)	404, 700, 892, 1130, 1282, 1445, 1612
NmeAIII	GCCGAG	3 cut(s)	214, 898, 1057
NmuCI	GTSAC	2 cut(s)	1516, 1861
NruI	TCGCGA	1 cut(s)	1356
NspI	RCATGY	2 cut(s)	404, 1612
OliI	CACNNNNGTG	1 cut(s)	1697
PaeR7I	CTCGAG	2 cut(s)	896, 1595
PceI	AGGCCT	1 cut(s)	50
PcsI	WCGNNNNNNNCGW	5 cut(s)	558, 741, 783, 903, 2019
PctI	GAATGC	1 cut(s)	492
PfeI	GAWTC	3 cut(s)	314, 1196, 2016
PflFI	GACNNNGTC	1 cut(s)	1231
PinAI	ACCGGT	1 cut(s)	413
Ple19I	CGATCG	1 cut(s)	1634
Ppu21I	YACGTR	1 cut(s)	1604
PpuMI	RGGWCCY	3 cut(s)	1100, 1413, 1500
Psp124BI	GAGCTC	3 cut(s)	888, 1431, 1917
Psp5II	RGGWCCY	3 cut(s)	1100, 1413, 1500
Psp6I	CCWGG	2 cut(s)	373, 1040
PspFI	CCCAGC	3 cut(s)	268, 919, 994
PspGI	CCWGG	2 cut(s)	373, 1040
PspPI	GGNCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
PspPPI	RGGWCCY	3 cut(s)	1100, 1413, 1500
PstI	CTGCAG	1 cut(s)	1173
PsuI	RGATCY	2 cut(s)	111, 1591
PsyI	GACNNNGTC	1 cut(s)	1231
PvuI	CGATCG	1 cut(s)	1634
RruI	TCGCGA	1 cut(s)	1356
RsaI	GTAC	3 cut(s)	134, 1059, 1332
RsaNI	GTAC	3 cut(s)	133, 1058, 1331
RseI	CAYNNNNRTG	2 cut(s)	1613, 1697
SacI	GAGCTC	3 cut(s)	888, 1431, 1917
SacII	CCGCGG	1 cut(s)	867
SalI	GTCGAC	1 cut(s)	1036
SaqAI	TTAA	3 cut(s)	308, 1476, 2128
Sau3AI	GATC	8 cut(s)	111, 658, 1000, 1264, 1591, 1624, 1631, 1637
Sau96I	GGNCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
ScrFI	CCNGG	8 cut(s)	299, 360, 375, 929, 1042, 1259, 1645, 1725
SduI	GDGCHC	9 cut(s)	472, 630, 704, 888, 926, 1295, 1431, 1692, 1917
SfaNI	GCATC	3 cut(s)	206, 925, 1944
SfcI	CTRYAG	1 cut(s)	1169
Sfr274I	CTCGAG	2 cut(s)	896, 1595
Sfr303I	CCGCGG	1 cut(s)	867
SgrAI	CRCCGGYG	1 cut(s)	413
SgrBI	CCGCGG	1 cut(s)	867
SinI	GGWCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
SlaI	CTCGAG	2 cut(s)	896, 1595
SmiMI	CAYNNNNRTG	2 cut(s)	1613, 1697
SmlI	CTYRAG	3 cut(s)	896, 1377, 1595
SmoI	CTYRAG	3 cut(s)	896, 1377, 1595
Sse9I	AATT	4 cut(s)	518, 1584, 1977, 2106
SseBI	AGGCCT	1 cut(s)	50
SspMI	CTAG	5 cut(s)	503, 987, 1106, 1505, 1877
SstI	GAGCTC	3 cut(s)	888, 1431, 1917
StuI	AGGCCT	1 cut(s)	50
StyD4I	CCNGG	8 cut(s)	297, 358, 373, 927, 1040, 1257, 1643, 1723
StyI	CCWWGG	2 cut(s)	1711, 2040
TaaI	ACNGT	7 cut(s)	80, 166, 484, 1156, 1335, 1696, 1990
TaiI	ACGT	5 cut(s)	570, 1298, 1462, 1606, 2058
TasI	AATT	4 cut(s)	518, 1584, 1977, 2106
TatI	WGTACW	1 cut(s)	1057
TauI	GCSGC	9 cut(s)	16, 30, 279, 725, 842, 866, 1069, 1093, 1767
TfiI	GAWTC	3 cut(s)	314, 1196, 2016
Tru1I	TTAA	3 cut(s)	308, 1476, 2128
Tru9I	TTAA	3 cut(s)	308, 1476, 2128
TscAI	CASTG	3 cut(s)	1081, 1333, 1438
TseFI	GTSAC	2 cut(s)	1516, 1861
TseI	GCWGC	4 cut(s)	5, 21, 24, 397
Tsp45I	GTSAC	2 cut(s)	1516, 1861
TspDTI	ATGAA	1 cut(s)	1188
TspGWI	ACGGA	5 cut(s)	23, 792, 1041, 2028, 2096
TspRI	CASTG	3 cut(s)	1081, 1333, 1438
Tth111I	GACNNNGTC	1 cut(s)	1231
VneI	GTGCAC	1 cut(s)	700
VpaK11BI	GGWCC	8 cut(s)	1100, 1413, 1500, 1659, 1707, 1718, 1728, 1993
XapI	RAATTY	2 cut(s)	518, 1584
XbaI	TCTAGA	2 cut(s)	502, 1876
XceI	RCATGY	2 cut(s)	404, 1612
XcmI	CCANNNNNNNNNTGG	1 cut(s)	454
XhoI	CTCGAG	2 cut(s)	896, 1595
XmiI	GTMKAC	2 cut(s)	475, 1037
XspI	CTAG	5 cut(s)	503, 987, 1106, 1505, 1877
ZraI	GACGTC	1 cut(s)	1460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.