Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004584

Physical Location & Seq

Genomic Coordinates Forward (+)

29261362 .. 29263500

Gene Structure 2139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGCACACCAAAACTGTTGCCATAGTCATGACTGTTGCCAAGGTTTCGTGTGCCGTTGTATCGTGTGCTACCGCTCTAATGCTCGTTCACATTATCCCGGATTTACTAAGCGTCAAGAAACGGGAGCTGTCGCTGAAGAGCAGAGCTGAAGAGCTTGACAAGGAGATGGGGCTTATGCTCACTCAGGAAGAAACAGGAAGGCATGTTAGGATGCTGACTCATGAAATTCGAAGCACGTTGGATCGGCACACTATCTTGAAAACTACCCTTGTTGAGTTGGGTAGAACTTTAGGCCTCCAGGAATGCGCGTTATGGATGCCGTCCAGAACTGGTATGAACCTAGAGCTTTCTCACACTCTGAACTACCATATACAAGCTGGGTCCTCTGTGTCAATAGACCTTCCTGAAGTGAACGAAGTCTTCAATAGTTCTCAAGCGATTCGTATACCATATACCTGCCCACTGGCAAGAATCAGACCACTTGTGGGAAGATATGTGCCACCTGAGGTCGTTGCTCTGCGGGTGCCCCTTTTAAATCTTTCAAATTTTCAAATCAATGACTGGCCGGATGTCTCTGCCAAAAGCTACGCAATTATGGTTTTGATTCTACCCACGGATGGCACCAGAACGTGGCGAGAACATGAACTGGAGCTGGTTGATGTTGTGGCAGATCAGGTAGCTGTTGCTCTTTCACATGCTGCTATTCTGGAAGAGTCTATGCGAGCCCGTAAACAGCTCACGGAGCAGAACGATGCTTTAGATTTAGCTTGGAGAGAAGCAGAGATGGCGATCCATGCCCGCAATGATTTCCTTGCTGTCATGAACCATGAAATGAGGACACCAATGCATGCATTCGTTGCATTGTCTTCTCTTCTGTTAGAGACGGAACTGACTCCGGAAGAAAGGCTTATGATAGAGACAGCGCTAAAGAGTAGCAACCTTTTGGAAACACTTGTTAACGACGTTTTAGATCTTTCTAGACTTGAAGATGATAGCCTAGAATTAGACATTGAAAAATTTAACCTCCATGGAGTTTTCAGAGAGGTAATGAATTTGGTACAGCCCGTCGCATCTGTGAAGAAGTTGTCTATGACTTTGATTCTATCCCCAGACTTACCTGTGTATGCCGTTGGAGATGAGAATCGGCTGTTGCAAACTATTCTCAACGTTGCTGGTAATGCTGTGAAGTTCACAAAGCAGGGCTATATTTCAATTACAGCGTCTGTTGCGAAATCAGAATCTTCAAGAGACTGGCAACCAGCGGAGTTTTATCCAGTGTCAACTGATGGTTACTTCTACCTACGAGTTCAGGTTAAGGATTCTGGCTGTGGTGTTCTCCCAGAAGATATTCGTCATCTTTTCACCAAGTTTTCTCAGCCTCGAAATGGATCCAATCGAATAAACAATGGTGCAGGACTTGGACTTGCCATTTGCAAACGGTTTGTAAACACCATGGGAGGTCATATTTGGATTGAAAGCGAGGGTATCGACAGAGGGAGTATCGTTGCATTCATCGTCCAACTAGGGATATGCGACAATCATAGTGATACAACAACACACCAGGTCCAGATGCCACCTAAAGGACAAGCAAATTATGGAAGCGGAGATGTCATCGGACACAAACCCGCCTTTAGGGATTGTTTCGGAGTAACTTCGTCGAATGCACGTTATCAAAGAAGTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0012505 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042562 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051740 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:0072328 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

GAF HATPase_c HisKA Response_reg

Protein Analysis

562

Amino Acids

62.49

Weight (kDa)

5.93

Isoelectric Point (pI)

44.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF	PF01590	81 - 230	4.5e-16	GAF domain
HisKA	PF00512	266 - 330	2.6e-15	His Kinase A (phospho-acceptor) domain
HATPase_c	PF02518	378 - 508	1.3e-21	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40940
fragaria_vesca	FvH4_2g26120 FvH4_2g26120 FvH4_2g26120
malus_domestica	MD03G1292200.v1.1 MD06G1001100.v1.1 MD11G1306200.v1.1
prunus_persica	Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1
pyrus_communis	pycom03g23140 pycom11g26800
rosa_chinensis	RchiOBHm_Chr6g0294491
rosa_laevigata	RLG00000011864
rosa_roxburghii	Rroxscaffold_7G00173280
rosa_rugosa	Rorug06G0245200 Rorug06G0245300 Rorug06G0245400
rosa_samantha	Rh6AG357700 Rh6BG364600 Rh6CG371700 Rh6DG358500
rosa_wichuraiana	Rw6G031200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	464
AccB1I	GGYRCC	2 cut(s)	523, 620
AccB7I	CCANNNNNTGG	1 cut(s)	630
AccBSI	CCGCTC	1 cut(s)	74
AccI	GTMKAC	1 cut(s)	445
AccII	CGCG	1 cut(s)	308
AccIII	TCCGGA	1 cut(s)	895
AciI	CCGC	6 cut(s)	72, 520, 799, 1262, 1602, 1626
AclI	AACGTT	1 cut(s)	1167
AclWI	GGATC	4 cut(s)	249, 784, 1383, 1396
AcoI	YGGCCR	1 cut(s)	563
AcsI	RAATTY	4 cut(s)	225, 544, 1016, 1051
AcuI	CTGAAG	3 cut(s)	155, 168, 426
AfaI	GTAC	1 cut(s)	1059
AfeI	AGCGCT	1 cut(s)	924
AfiI	CCNNNNNNNGG	6 cut(s)	485, 617, 630, 1385, 1580, 1632
AgsI	TTSAA	9 cut(s)	259, 424, 543, 551, 986, 1013, 1212, 1245, 1475
AjnI	CCWGG	2 cut(s)	297, 1560
Alw26I	GTCTC	4 cut(s)	577, 875, 911, 1242
AlwI	GGATC	4 cut(s)	249, 784, 1383, 1396
AlwNI	CAGNNNCTG	1 cut(s)	1223
Aor13HI	TCCGGA	1 cut(s)	895
Aor51HI	AGCGCT	1 cut(s)	924
AoxI	GGCC	2 cut(s)	292, 563
ApeKI	GCWGC	1 cut(s)	698
ApoI	RAATTY	4 cut(s)	225, 544, 1016, 1051
ArsI	GACNNNNNNTTYG	2 cut(s)	1413, 1445
Asp700I	GAANNNNTTC	1 cut(s)	1347
AspLEI	GCGC	2 cut(s)	308, 925
AspS9I	GGNCC	2 cut(s)	381, 1564
AsuC2I	CCSGG	1 cut(s)	98
AsuHPI	GGTGA	1 cut(s)	1354
AsuII	TTCGAA	1 cut(s)	229
AvaII	GGWCC	2 cut(s)	381, 1564
AxyI	CCTNAGG	1 cut(s)	504
BaeGI	GKGCMC	1 cut(s)	528
BamHI	GGATCC	1 cut(s)	1388
BanI	GGYRCC	2 cut(s)	523, 620
BanII	GRGCYC	1 cut(s)	727
BbsI	GAAGAC	2 cut(s)	412, 858
BbvI	GCAGC	1 cut(s)	685
BccI	CCATC	4 cut(s)	160, 611, 778, 1280
BceAI	ACGGC	3 cut(s)	38, 304, 1112
BciT130I	CCWGG	2 cut(s)	299, 1562
BcnI	CCSGG	1 cut(s)	98
BcoDI	GTCTC	4 cut(s)	577, 875, 911, 1242
BfaI	CTAG	4 cut(s)	341, 978, 998, 1523
BfoI	RGCGCY	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	464
BglII	AGATCT	1 cut(s)	970
BisI	GCNGC	1 cut(s)	699
BlsI	GCNGC	1 cut(s)	700
Bme1390I	CCNGG	3 cut(s)	98, 299, 1562
Bme18I	GGWCC	2 cut(s)	381, 1564
BmgT120I	GGNCC	2 cut(s)	381, 1564
BmiI	GGNNCC	4 cut(s)	382, 525, 622, 1390
BmrFI	CCNGG	3 cut(s)	98, 299, 1562
BmsI	GCATC	5 cut(s)	201, 306, 742, 1079, 1560
BpiI	GAAGAC	2 cut(s)	412, 858
BpmI	CTGGAG	2 cut(s)	281, 668
Bpu14I	TTCGAA	1 cut(s)	229
BpuEI	CTTGAG	1 cut(s)	417
BpuMI	CCSGG	1 cut(s)	98
BsaBI	GATNNNNATC	2 cut(s)	788, 1140
BsaJI	CCNNGG	4 cut(s)	39, 612, 1027, 1452
BsaWI	WCCGGW	1 cut(s)	895
Bsc4I	CCNNNNNNNGG	6 cut(s)	485, 617, 630, 1385, 1580, 1632
Bse1I	ACTGG	6 cut(s)	334, 468, 566, 651, 1256, 1274
Bse21I	CCTNAGG	1 cut(s)	504
Bse3DI	GCAATG	1 cut(s)	808
Bse8I	GATNNNNATC	2 cut(s)	788, 1140
BseAI	TCCGGA	1 cut(s)	895
BseBI	CCWGG	2 cut(s)	299, 1562
BseDI	CCNNGG	4 cut(s)	39, 612, 1027, 1452
BseGI	GGATG	4 cut(s)	216, 321, 574, 622
BseJI	GATNNNNATC	2 cut(s)	788, 1140
BseLI	CCNNNNNNNGG	6 cut(s)	485, 617, 630, 1385, 1580, 1632
BseMI	GCAATG	1 cut(s)	808
BseMII	CTCAG	3 cut(s)	197, 495, 1388
BseNI	ACTGG	6 cut(s)	334, 468, 566, 651, 1256, 1274
BseSI	GKGCMC	1 cut(s)	528
BseXI	GCAGC	1 cut(s)	685
BseYI	CCCAGC	1 cut(s)	377
BsgI	GTGCAG	1 cut(s)	1431
Bsh1236I	CGCG	1 cut(s)	308
BshFI	GGCC	2 cut(s)	294, 565
BshNI	GGYRCC	2 cut(s)	523, 620
BsiSI	CCGG	3 cut(s)	98, 566, 896
BslI	CCNNNNNNNGG	6 cut(s)	485, 617, 630, 1385, 1580, 1632
BsmAI	GTCTC	4 cut(s)	577, 875, 911, 1242
BsmBI	CGTCTC	1 cut(s)	875
BsmI	GAATGC	4 cut(s)	308, 851, 1508, 1666
BsnI	GGCC	2 cut(s)	294, 565
Bsp119I	TTCGAA	1 cut(s)	229
Bsp1286I	GDGCHC	2 cut(s)	528, 727
Bsp13I	TCCGGA	1 cut(s)	895
Bsp143I	GATC	5 cut(s)	241, 670, 789, 970, 1388
Bsp19I	CCATGG	2 cut(s)	1027, 1452
BspACI	CCGC	6 cut(s)	72, 520, 799, 1262, 1602, 1626
BspANI	GGCC	2 cut(s)	294, 565
BspCNI	CTCAG	3 cut(s)	196, 496, 1387
BspEI	TCCGGA	1 cut(s)	895
BspFNI	CGCG	1 cut(s)	308
BspHI	TCATGA	3 cut(s)	27, 220, 819
BspLI	GGNNCC	4 cut(s)	382, 525, 622, 1390
BspMI	ACCTGC	1 cut(s)	464
BspPI	GGATC	4 cut(s)	249, 784, 1383, 1396
BspQI	GCTCTTC	2 cut(s)	131, 144
BspT104I	TTCGAA	1 cut(s)	229
BspT107I	GGYRCC	2 cut(s)	523, 620
BsrBI	CCGCTC	1 cut(s)	74
BsrDI	GCAATG	1 cut(s)	808
BsrI	ACTGG	6 cut(s)	334, 468, 566, 651, 1256, 1274
BssECI	CCNNGG	4 cut(s)	39, 612, 1027, 1452
BssMI	GATC	5 cut(s)	241, 670, 789, 970, 1388
BssNAI	GTATAC	1 cut(s)	446
BssT1I	CCWWGG	3 cut(s)	39, 1027, 1452
Bst1107I	GTATAC	1 cut(s)	446
Bst2UI	CCWGG	2 cut(s)	299, 1562
Bst4CI	ACNGT	3 cut(s)	16, 34, 1440
Bst6I	CTCTTC	4 cut(s)	131, 144, 705, 876
BstAPI	GCANNNNNTGC	1 cut(s)	857
BstBI	TTCGAA	1 cut(s)	229
BstC8I	GCNNGC	3 cut(s)	723, 799, 849
BstDEI	CTNAG	4 cut(s)	107, 183, 504, 1374
BstDSI	CCRYGG	3 cut(s)	612, 1027, 1452
BstF5I	GGATG	4 cut(s)	216, 321, 574, 622
BstFNI	CGCG	1 cut(s)	308
BstH2I	RGCGCY	1 cut(s)	926
BstHHI	GCGC	2 cut(s)	308, 925
BstKTI	GATC	5 cut(s)	244, 673, 792, 973, 1391
BstMAI	GTCTC	4 cut(s)	577, 875, 911, 1242
BstMBI	GATC	5 cut(s)	241, 670, 789, 970, 1388
BstMWI	GCNNNNNNNGC	6 cut(s)	742, 785, 794, 857, 1178, 1226
BstNI	CCWGG	2 cut(s)	299, 1562
BstNSI	RCATGY	3 cut(s)	206, 698, 851
BstSCI	CCNGG	3 cut(s)	96, 297, 1560
BstSLI	GKGCMC	1 cut(s)	528
BstUI	CGCG	1 cut(s)	308
BstV1I	GCAGC	1 cut(s)	685
BstV2I	GAAGAC	2 cut(s)	412, 858
BstX2I	RGATCY	2 cut(s)	970, 1388
BstYI	RGATCY	2 cut(s)	970, 1388
BstZ17I	GTATAC	1 cut(s)	446
Bsu36I	CCTNAGG	1 cut(s)	504
BsuRI	GGCC	2 cut(s)	294, 565
BtgI	CCRYGG	3 cut(s)	612, 1027, 1452
BtsCI	GGATG	4 cut(s)	216, 321, 574, 622
BtsIMutI	CAGTG	2 cut(s)	461, 1281
BveI	ACCTGC	1 cut(s)	464
Cac8I	GCNNGC	3 cut(s)	723, 799, 849
CaiI	CAGNNNCTG	1 cut(s)	1223
CciI	TCATGA	3 cut(s)	27, 220, 819
CfoI	GCGC	2 cut(s)	308, 925
Cfr13I	GGNCC	2 cut(s)	381, 1564
CseI	GACGC	2 cut(s)	100, 1209
CsiI	ACCWGGT	1 cut(s)	1560
Csp6I	GTAC	1 cut(s)	1058
CviQI	GTAC	1 cut(s)	1058
DdeI	CTNAG	4 cut(s)	107, 183, 504, 1374
DpnI	GATC	5 cut(s)	243, 672, 791, 972, 1390
DpnII	GATC	5 cut(s)	241, 670, 789, 970, 1388
DraI	TTTAAA	1 cut(s)	534
EaeI	YGGCCR	1 cut(s)	563
Eam1104I	CTCTTC	4 cut(s)	131, 144, 705, 876
EarI	CTCTTC	4 cut(s)	131, 144, 705, 876
Eco130I	CCWWGG	3 cut(s)	39, 1027, 1452
Eco147I	AGGCCT	1 cut(s)	294
Eco24I	GRGCYC	1 cut(s)	727
Eco47I	GGWCC	2 cut(s)	381, 1564
Eco47III	AGCGCT	1 cut(s)	924
Eco57I	CTGAAG	3 cut(s)	155, 168, 426
Eco81I	CCTNAGG	1 cut(s)	504
EcoO109I	RGGNCCY	1 cut(s)	381
EcoRII	CCWGG	2 cut(s)	297, 1560
EcoT14I	CCWWGG	3 cut(s)	39, 1027, 1452
EcoT22I	ATGCAT	2 cut(s)	849, 853
EcoT38I	GRGCYC	1 cut(s)	727
ErhI	CCWWGG	3 cut(s)	39, 1027, 1452
Esp3I	CGTCTC	1 cut(s)	875
FalI	AAGNNNNNCTT	2 cut(s)	891, 923
FauI	CCCGC	3 cut(s)	513, 806, 1633
FblI	GTMKAC	1 cut(s)	445
Fnu4HI	GCNGC	1 cut(s)	699
FokI	GGATG	4 cut(s)	223, 328, 581, 629
FriOI	GRGCYC	1 cut(s)	727
Fsp4HI	GCNGC	1 cut(s)	699
FspBI	CTAG	4 cut(s)	341, 978, 998, 1523
GlaI	GCGC	2 cut(s)	307, 924
GluI	GCNGC	1 cut(s)	699
GsaI	CCCAGC	1 cut(s)	381
GsuI	CTGGAG	2 cut(s)	281, 668
HaeII	RGCGCY	1 cut(s)	926
HaeIII	GGCC	2 cut(s)	294, 565
HapII	CCGG	3 cut(s)	98, 566, 896
HgaI	GACGC	2 cut(s)	100, 1209
HhaI	GCGC	2 cut(s)	308, 925
Hin6I	GCGC	2 cut(s)	306, 923
HinP1I	GCGC	2 cut(s)	306, 923
HincII	GTYRAC	2 cut(s)	958, 1281
HindII	GTYRAC	2 cut(s)	958, 1281
HpaI	GTTAAC	1 cut(s)	958
HpaII	CCGG	3 cut(s)	98, 566, 896
HphI	GGTGA	1 cut(s)	1354
Hpy166II	GTNNAC	8 cut(s)	88, 412, 446, 731, 958, 1191, 1281, 1447
Hpy188I	TCNGA	6 cut(s)	360, 476, 1040, 1237, 1616, 1646
Hpy8I	GTNNAC	8 cut(s)	88, 412, 446, 731, 958, 1191, 1281, 1447
Hpy99I	CGWCG	3 cut(s)	965, 1070, 1660
HpyAV	CCTTC	2 cut(s)	192, 410
HpyCH4III	ACNGT	3 cut(s)	16, 34, 1440
HpyCH4IV	ACGT	5 cut(s)	236, 629, 963, 1167, 1666
HpyCH4V	TGCA	9 cut(s)	4, 847, 851, 860, 1153, 1412, 1434, 1508, 1664
HpyF10VI	GCNNNNNNNGC	6 cut(s)	742, 785, 794, 857, 1178, 1226
HpyF3I	CTNAG	4 cut(s)	107, 183, 504, 1374
HpySE526I	ACGT	5 cut(s)	236, 629, 963, 1167, 1666
HspAI	GCGC	2 cut(s)	306, 923
Kpn2I	TCCGGA	1 cut(s)	895
KspAI	GTTAAC	1 cut(s)	958
Kzo9I	GATC	5 cut(s)	241, 670, 789, 970, 1388
LguI	GCTCTTC	2 cut(s)	131, 144
LmnI	GCTCC	3 cut(s)	124, 649, 742
Lsp1109I	GCAGC	1 cut(s)	685
LweI	GCATC	5 cut(s)	201, 306, 742, 1079, 1560
MabI	ACCWGGT	1 cut(s)	1560
MaeI	CTAG	4 cut(s)	341, 978, 998, 1523
MaeII	ACGT	5 cut(s)	236, 629, 963, 1167, 1666
MaeIII	GTNAC	2 cut(s)	1289, 1648
MalI	GATC	5 cut(s)	243, 672, 791, 972, 1390
MbiI	CCGCTC	1 cut(s)	74
MboI	GATC	5 cut(s)	241, 670, 789, 970, 1388
MflI	RGATCY	2 cut(s)	970, 1388
MhlI	GDGCHC	2 cut(s)	528, 727
MluCI	AATT	8 cut(s)	225, 544, 591, 1001, 1016, 1051, 1212, 1591
MlyI	GAGTC	3 cut(s)	211, 722, 886
MmeI	TCCRAC	3 cut(s)	219, 1111, 1543
Mph1103I	ATGCAT	2 cut(s)	849, 853
MroI	TCCGGA	1 cut(s)	895
MroXI	GAANNNNTTC	1 cut(s)	1347
MseI	TTAA	4 cut(s)	533, 957, 1020, 1314
MslI	CAYNNNNRTG	1 cut(s)	26
MspA1I	CMGCKG	1 cut(s)	1262
MspI	CCGG	3 cut(s)	98, 566, 896
MspR9I	CCNGG	3 cut(s)	98, 299, 1562
Mva1269I	GAATGC	4 cut(s)	308, 851, 1508, 1666
MvaI	CCWGG	2 cut(s)	299, 1562
MvnI	CGCG	1 cut(s)	308
MwoI	GCNNNNNNNGC	6 cut(s)	742, 785, 794, 857, 1178, 1226
NciI	CCSGG	1 cut(s)	98
NcoI	CCATGG	2 cut(s)	1027, 1452
NdeII	GATC	5 cut(s)	241, 670, 789, 970, 1388
NlaIV	GGNNCC	4 cut(s)	382, 525, 622, 1390
NsiI	ATGCAT	2 cut(s)	849, 853
NspI	RCATGY	3 cut(s)	206, 698, 851
NspV	TTCGAA	1 cut(s)	229
PaeI	GCATGC	1 cut(s)	851
PagI	TCATGA	3 cut(s)	27, 220, 819
PceI	AGGCCT	1 cut(s)	294
PciSI	GCTCTTC	2 cut(s)	131, 144
PctI	GAATGC	4 cut(s)	308, 851, 1508, 1666
PdmI	GAANNNNTTC	1 cut(s)	1347
PfeI	GAWTC	7 cut(s)	439, 471, 604, 1099, 1141, 1238, 1319
PflMI	CCANNNNNTGG	1 cut(s)	630
PfoI	TCCNGGA	2 cut(s)	96, 297
PkrI	GCNGC	1 cut(s)	700
PleI	GAGTC	3 cut(s)	211, 721, 886
PpsI	GAGTC	3 cut(s)	211, 721, 886
PpuMI	RGGWCCY	1 cut(s)	381
Psp1406I	AACGTT	1 cut(s)	1167
Psp5II	RGGWCCY	1 cut(s)	381
Psp6I	CCWGG	2 cut(s)	297, 1560
PspFI	CCCAGC	1 cut(s)	377
PspGI	CCWGG	2 cut(s)	297, 1560
PspN4I	GGNNCC	4 cut(s)	382, 525, 622, 1390
PspPI	GGNCC	2 cut(s)	381, 1564
PspPPI	RGGWCCY	1 cut(s)	381
PstNI	CAGNNNCTG	1 cut(s)	1223
PsuI	RGATCY	2 cut(s)	970, 1388
RsaI	GTAC	1 cut(s)	1059
RsaNI	GTAC	1 cut(s)	1058
RseI	CAYNNNNRTG	1 cut(s)	26
SapI	GCTCTTC	2 cut(s)	131, 144
SaqAI	TTAA	4 cut(s)	533, 957, 1020, 1314
SatI	GCNGC	1 cut(s)	699
Sau3AI	GATC	5 cut(s)	241, 670, 789, 970, 1388
Sau96I	GGNCC	2 cut(s)	381, 1564
SchI	GAGTC	3 cut(s)	211, 722, 886
ScrFI	CCNGG	3 cut(s)	98, 299, 1562
SduI	GDGCHC	2 cut(s)	528, 727
SexAI	ACCWGGT	1 cut(s)	1560
SfaNI	GCATC	5 cut(s)	201, 306, 742, 1079, 1560
SfuI	TTCGAA	1 cut(s)	229
SinI	GGWCC	2 cut(s)	381, 1564
SmiMI	CAYNNNNRTG	1 cut(s)	26
SmlI	CTYRAG	1 cut(s)	432
SmoI	CTYRAG	1 cut(s)	432
SphI	GCATGC	1 cut(s)	851
Sse9I	AATT	8 cut(s)	225, 544, 591, 1001, 1016, 1051, 1212, 1591
SseBI	AGGCCT	1 cut(s)	294
SsiI	CCGC	6 cut(s)	72, 520, 799, 1262, 1602, 1626
SspMI	CTAG	4 cut(s)	341, 978, 998, 1523
StuI	AGGCCT	1 cut(s)	294
StyD4I	CCNGG	3 cut(s)	96, 297, 1560
StyI	CCWWGG	3 cut(s)	39, 1027, 1452
TaaI	ACNGT	3 cut(s)	16, 34, 1440
TaiI	ACGT	5 cut(s)	239, 632, 966, 1170, 1669
TaqI	TCGA	5 cut(s)	229, 1381, 1396, 1488, 1658
TasI	AATT	8 cut(s)	225, 544, 591, 1001, 1016, 1051, 1212, 1591
TfiI	GAWTC	7 cut(s)	439, 471, 604, 1099, 1141, 1238, 1319
Tru1I	TTAA	4 cut(s)	533, 957, 1020, 1314
Tru9I	TTAA	4 cut(s)	533, 957, 1020, 1314
TscAI	CASTG	2 cut(s)	468, 1281
TseI	GCWGC	1 cut(s)	698
TspDTI	ATGAA	7 cut(s)	237, 350, 657, 836, 843, 1064, 1501
TspGWI	ACGGA	3 cut(s)	629, 755, 899
TspRI	CASTG	2 cut(s)	468, 1281
Van91I	CCANNNNNTGG	1 cut(s)	630
VpaK11BI	GGWCC	2 cut(s)	381, 1564
XapI	RAATTY	4 cut(s)	225, 544, 1016, 1051
XbaI	TCTAGA	1 cut(s)	977
XceI	RCATGY	3 cut(s)	206, 698, 851
XcmI	CCANNNNNNNNNTGG	1 cut(s)	374
XmiI	GTMKAC	1 cut(s)	445
XmnI	GAANNNNTTC	1 cut(s)	1347
XspI	CTAG	4 cut(s)	341, 978, 998, 1523
Zsp2I	ATGCAT	2 cut(s)	849, 853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.