Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0004584

Physical Location & Seq

Genomic Coordinates Reverse (-)

55673412 .. 55676710

Gene Structure 3299 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG357700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGAGTCATGTGATTGTGTTGAACCACAATGGCCCCCTGATGAGCTTCTGGTGAAGTATCAGTACATCTCTGATGTGTTTATTGCGTTGGCGTATTTCTCAATTCCATTGGAGCTCATATACTTTGTGCAGAAATCCGCTTTCTTCCCATATAGATGGGTGCTTATGCAGTTTGGTGCTTTCATTGTGCTTTGTGGCGCAACCCATTTCATAAACGTGTGGACATTCTCTATGCACACCAAAACTGTTGCTATTGTGATGACTATTGCAAAGGTCTCTTGTGCTGTTGTATCGTGTGCAACAGCGCTGATGCTTGTTCACATTATTCCGGATTTGTTGTCTGTCAAGACCCGGGAGCTCTTTCTCAAGAACAGGGCCGAAGAGCTTGACCGGGAGATGGGCCTTATTCTAACTCAAGAAGAAACAGGAAGGCATGTTAGAATGCTGACACATGAAATTAGAAGCACACTTGACAGACACACTATACTGAAAACCACTCTTGTTGAGCTGGGAAGGACTTTAGGCCTTGAGGAATGCGCTTTGTGGATGCCATGCAGGAATGGCATGAACCTTCAACTTTCTCATACTCTCAACTATGAAGCACAAATTGGGTCTACTGTGCCATTTAGCCTTCCTATAGTTAGTGAAGTTTTCAAGAGCTCTCGAGCAATGCGTATACCATATACCTGCCCCTTGGTCCGGATCAGACCACTCGTGGCAAGATATGTGCAACCTGAGGTTGTTGCTTTGCGTGTACCACTGTTGAATCTTTCAAATTTCCAAATCAACGACTGGCCTGATGTCTCTGCGAAAAGCTATGCCATCATGGTTCTTATTCTACCAACAGATGGCACTAGAAAGTGGCGAGACCATGAACTTGAACTGGTTGATGTTGTTGCAGATCAGGTTGCTGTTGCTCTTTCACACGCTGCTATTCTTGAAGAGTCTATGCGAGCCAGTGATCAGCTCGTAGAGCAGAATGATGCTTTAGATTTGGCCCGGAGAGAGGCAGAACTGGCAATCCATGCTCGCAACGACTTCCTTGCTGTCCTGAACCATGAAATGAGGACACCAATGCATGCAATTATTGCATTGTCTTCACTTCTTTTAGAAACAGAACTAACACTAGAACATAGGGTTATGATAGAATCGATACTAAAGAGTAGCAACCTTTTGGAAACTCTTATTAATGATGTTCTAGATCTTTCTAGACTCGAAGATGGCAGCCTAGACTTGGACATTGGAAAGTTTAACCTCCATGGAGTTTTCCGAGAGGCAATCGATTTGATAAAGCCTATTGCTACTGTGAAGAAGTTATCTATGACTTTAATTCTGGCCCCAGATGTGCCTGTGTGTGCTGTTGGAGATGAGAACCGGCTTATGCAAACTATTTTAAATGTTGCTGGTAATGCTGTCAAGTTTACAAAGGAGGGTTATATTTCAGTTATAGCATCTATTGCAAAACCAGATTCTTCAAGAGATTGGCGACTGCCTGAATTTTATCCAGCGTCAAGTGACGGCCATTTTTACCTTCGAGTTCAGGTCAGTGCATTCAATTTTTGTACAGTACTGCCTCTATGCATTTCGAGACTGGGGTTCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010104 GO:0010105 GO:0010646 GO:0010648 GO:0012505 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042562 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051740 GO:0065007 GO:0070297 GO:0070298 GO:0071704 GO:0072328 GO:0140096 GO:1901564 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

GAF HATPase_c HisKA Response_reg

Protein Analysis

534

Amino Acids

60.2

Weight (kDa)

5.64

Isoelectric Point (pI)

35.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ETR1_N	PF25487	17 - 115	1.3e-37	Ethylene receptor 1-like, N-terminal domain
GAF	PF01590	158 - 307	3.5e-16	GAF domain
HisKA	PF00512	343 - 408	5.3e-17	His Kinase A (phospho-acceptor) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40940
fragaria_vesca	FvH4_2g26120 FvH4_2g26120 FvH4_2g26120
malus_domestica	MD03G1292200.v1.1 MD06G1001100.v1.1 MD11G1306200.v1.1
prunus_persica	Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1 Prupe.8G265200_v2.0.a1
pyrus_communis	pycom03g23140 pycom11g26800
rosa_chinensis	RchiOBHm_Chr6g0294491
rosa_laevigata	RLG00000011864
rosa_roxburghii	Rroxscaffold_7G00173280
rosa_rugosa	Rorug06G0245200 Rorug06G0245300 Rorug06G0245400
rosa_samantha	Rh6AG357700 Rh6BG364600 Rh6CG371700 Rh6DG358500
rosa_wichuraiana	Rw6G031200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	695
AccB7I	CCANNNNNTGG	1 cut(s)	848
AccI	GTMKAC	2 cut(s)	614, 676
AccIII	TCCGGA	2 cut(s)	328, 699
AciI	CCGC	1 cut(s)	138
AclWI	GGATC	1 cut(s)	710
AcoI	YGGCCR	1 cut(s)	1519
AcsI	RAATTY	2 cut(s)	775, 1496
AfaI	GTAC	4 cut(s)	65, 756, 1564, 1569
AfeI	AGCGCT	1 cut(s)	306
AfiI	CCNNNNNNNGG	5 cut(s)	397, 699, 848, 1006, 1234
AflIII	ACRYGT	1 cut(s)	216
AgsI	TTSAA	9 cut(s)	23, 575, 655, 766, 774, 881, 941, 1476, 1555
AjuI	GAANNNNNNNTTGG	2 cut(s)	591, 623
AloI	GAACNNNNNNTCC	2 cut(s)	1005, 1037
AluBI	AGCT	8 cut(s)	46, 115, 358, 385, 508, 660, 816, 967
AluI	AGCT	8 cut(s)	46, 115, 358, 385, 508, 660, 816, 967
Alw21I	GWGCWC	3 cut(s)	117, 360, 662
Alw26I	GTCTC	4 cut(s)	280, 808, 861, 1582
AlwI	GGATC	1 cut(s)	710
Ama87I	CYCGRG	2 cut(s)	351, 663
Aor13HI	TCCGGA	2 cut(s)	328, 699
Aor51HI	AGCGCT	1 cut(s)	306
AoxI	GGCC	8 cut(s)	32, 375, 400, 523, 794, 996, 1335, 1519
ApeKI	GCWGC	2 cut(s)	929, 1224
ApoI	RAATTY	2 cut(s)	775, 1496
AseI	ATTAAT	1 cut(s)	1188
AspLEI	GCGC	3 cut(s)	200, 307, 539
AspS9I	GGNCC	6 cut(s)	33, 375, 400, 697, 997, 1336
AsuC2I	CCSGG	4 cut(s)	352, 353, 392, 1000
AsuHPI	GGTGA	1 cut(s)	64
AvaI	CYCGRG	2 cut(s)	351, 663
AvaII	GGWCC	1 cut(s)	697
AxyI	CCTNAGG	1 cut(s)	735
BanII	GRGCYC	3 cut(s)	117, 360, 662
BarI	GAAGNNNNNNTAC	2 cut(s)	47, 79
BauI	CACGAG	1 cut(s)	713
BbsI	GAAGAC	1 cut(s)	1089
Bbv12I	GWGCWC	3 cut(s)	117, 360, 662
BbvI	GCAGC	2 cut(s)	916, 1236
BccI	CCATC	5 cut(s)	150, 391, 830, 842, 1214
BceAI	ACGGC	1 cut(s)	1534
BcgI	CGANNNNNNTGC	2 cut(s)	1025, 1059
BclI	TGATCA	1 cut(s)	961
BcnI	CCSGG	4 cut(s)	352, 353, 392, 1000
BcoDI	GTCTC	4 cut(s)	280, 808, 861, 1582
BfaI	CTAG	5 cut(s)	855, 1127, 1199, 1209, 1229
BfmI	CTRYAG	1 cut(s)	636
BfoI	RGCGCY	1 cut(s)	308
BfuAI	ACCTGC	1 cut(s)	695
BglII	AGATCT	1 cut(s)	1201
BisI	GCNGC	2 cut(s)	930, 1225
BlsI	GCNGC	2 cut(s)	931, 1226
BmcAI	AGTACT	1 cut(s)	1569
Bme1390I	CCNGG	4 cut(s)	352, 353, 392, 1000
Bme18I	GGWCC	1 cut(s)	697
BmeT110I	CYCGRG	2 cut(s)	351, 663
BmgT120I	GGNCC	6 cut(s)	33, 375, 400, 697, 997, 1336
BmiI	GGNNCC	2 cut(s)	35, 1338
BmrFI	CCNGG	4 cut(s)	352, 353, 392, 1000
BmrI	ACTGGG	1 cut(s)	1601
BmsI	GCATC	4 cut(s)	300, 537, 973, 1460
BmuI	ACTGGG	1 cut(s)	1601
BpiI	GAAGAC	1 cut(s)	1089
BpuEI	CTTGAG	3 cut(s)	350, 399, 548
BpuMI	CCSGG	4 cut(s)	352, 353, 392, 1000
Bsa29I	ATCGAT	2 cut(s)	1151, 1281
BsaI	GGTCTC	2 cut(s)	280, 861
BsaJI	CCNNGG	3 cut(s)	351, 693, 1258
BsaWI	WCCGGW	2 cut(s)	328, 699
Bsc4I	CCNNNNNNNGG	5 cut(s)	397, 699, 848, 1006, 1234
Bse118I	RCCGGY	1 cut(s)	1374
Bse1I	ACTGG	5 cut(s)	797, 888, 957, 1020, 1596
Bse21I	CCTNAGG	1 cut(s)	735
Bse3DI	GCAATG	1 cut(s)	675
BseAI	TCCGGA	2 cut(s)	328, 699
BseCI	ATCGAT	2 cut(s)	1151, 1281
BseDI	CCNNGG	3 cut(s)	351, 693, 1258
BseGI	GGATG	1 cut(s)	552
BseLI	CCNNNNNNNGG	5 cut(s)	397, 699, 848, 1006, 1234
BseMI	GCAATG	1 cut(s)	675
BseMII	CTCAG	1 cut(s)	726
BseNI	ACTGG	5 cut(s)	797, 888, 957, 1020, 1596
BseXI	GCAGC	2 cut(s)	916, 1236
BseYI	CCCAGC	1 cut(s)	508
BsgI	GTGCAG	1 cut(s)	149
BshFI	GGCC	8 cut(s)	34, 377, 402, 525, 796, 998, 1337, 1521
BshVI	ATCGAT	2 cut(s)	1151, 1281
BsiHKAI	GWGCWC	3 cut(s)	117, 360, 662
BsiHKCI	CYCGRG	2 cut(s)	351, 663
BsiSI	CCGG	6 cut(s)	329, 352, 391, 700, 1000, 1375
BslI	CCNNNNNNNGG	5 cut(s)	397, 699, 848, 1006, 1234
BsmAI	GTCTC	4 cut(s)	280, 808, 861, 1582
BsmI	GAATGC	3 cut(s)	447, 539, 1550
BsnI	GGCC	8 cut(s)	34, 377, 402, 525, 796, 998, 1337, 1521
Bso31I	GGTCTC	2 cut(s)	280, 861
BsoBI	CYCGRG	2 cut(s)	351, 663
Bsp1286I	GDGCHC	3 cut(s)	117, 360, 662
Bsp13I	TCCGGA	2 cut(s)	328, 699
Bsp1407I	TGTACA	1 cut(s)	1562
Bsp143I	GATC	4 cut(s)	702, 901, 961, 1201
Bsp19I	CCATGG	1 cut(s)	1258
BspACI	CCGC	1 cut(s)	138
BspANI	GGCC	8 cut(s)	34, 377, 402, 525, 796, 998, 1337, 1521
BspCNI	CTCAG	1 cut(s)	727
BspDI	ATCGAT	2 cut(s)	1151, 1281
BspEI	TCCGGA	2 cut(s)	328, 699
BspLI	GGNNCC	2 cut(s)	35, 1338
BspMI	ACCTGC	1 cut(s)	695
BspPI	GGATC	1 cut(s)	710
BspQI	GCTCTTC	1 cut(s)	375
BspTNI	GGTCTC	2 cut(s)	280, 861
BsrDI	GCAATG	1 cut(s)	675
BsrFI	RCCGGY	1 cut(s)	1374
BsrGI	TGTACA	1 cut(s)	1562
BsrI	ACTGG	5 cut(s)	797, 888, 957, 1020, 1596
BssAI	RCCGGY	1 cut(s)	1374
BssECI	CCNNGG	3 cut(s)	351, 693, 1258
BssMI	GATC	4 cut(s)	702, 901, 961, 1201
BssNAI	GTATAC	1 cut(s)	677
BssSI	CACGAG	1 cut(s)	713
BssT1I	CCWWGG	2 cut(s)	693, 1258
Bst1107I	GTATAC	1 cut(s)	677
Bst2BI	CACGAG	1 cut(s)	713
Bst4CI	ACNGT	5 cut(s)	247, 619, 762, 1306, 1567
Bst6I	CTCTTC	2 cut(s)	375, 936
BstAPI	GCANNNNNTGC	3 cut(s)	1025, 1088, 1457
BstAUI	TGTACA	1 cut(s)	1562
BstC8I	GCNNGC	3 cut(s)	954, 1030, 1080
BstDEI	CTNAG	2 cut(s)	735, 1602
BstDSI	CCRYGG	1 cut(s)	1258
BstF5I	GGATG	1 cut(s)	552
BstH2I	RGCGCY	1 cut(s)	308
BstHHI	GCGC	3 cut(s)	200, 307, 539
BstKTI	GATC	4 cut(s)	705, 904, 964, 1204
BstMAI	GTCTC	4 cut(s)	280, 808, 861, 1582
BstMBI	GATC	4 cut(s)	702, 901, 961, 1201
BstMWI	GCNNNNNNNGC	7 cut(s)	561, 973, 1016, 1025, 1088, 1409, 1457
BstNSI	RCATGY	2 cut(s)	437, 1082
BstSCI	CCNGG	4 cut(s)	350, 351, 390, 998
BstSFI	CTRYAG	1 cut(s)	636
BstV1I	GCAGC	2 cut(s)	916, 1236
BstV2I	GAAGAC	1 cut(s)	1089
BstX2I	RGATCY	1 cut(s)	1201
BstXI	CCANNNNNNTGG	1 cut(s)	156
BstYI	RGATCY	1 cut(s)	1201
BstZ17I	GTATAC	1 cut(s)	677
Bsu15I	ATCGAT	2 cut(s)	1151, 1281
Bsu36I	CCTNAGG	1 cut(s)	735
BsuRI	GGCC	8 cut(s)	34, 377, 402, 525, 796, 998, 1337, 1521
BsuTUI	ATCGAT	2 cut(s)	1151, 1281
BtgI	CCRYGG	1 cut(s)	1258
BtsCI	GGATG	1 cut(s)	552
BtsIMutI	CAGTG	3 cut(s)	758, 964, 1552
BveI	ACCTGC	1 cut(s)	695
Cac8I	GCNNGC	3 cut(s)	954, 1030, 1080
CfoI	GCGC	3 cut(s)	200, 307, 539
Cfr10I	RCCGGY	1 cut(s)	1374
Cfr13I	GGNCC	6 cut(s)	33, 375, 400, 697, 997, 1336
Cfr9I	CCCGGG	1 cut(s)	351
ClaI	ATCGAT	2 cut(s)	1151, 1281
CseI	GACGC	1 cut(s)	1497
Csp6I	GTAC	4 cut(s)	64, 755, 1563, 1568
CspCI	CAANNNNNGTGG	2 cut(s)	484, 519
CviQI	GTAC	4 cut(s)	64, 755, 1563, 1568
DdeI	CTNAG	2 cut(s)	735, 1602
DpnI	GATC	4 cut(s)	704, 903, 963, 1203
DpnII	GATC	4 cut(s)	702, 901, 961, 1201
DraI	TTTAAA	1 cut(s)	1395
EaeI	YGGCCR	1 cut(s)	1519
Eam1104I	CTCTTC	2 cut(s)	375, 936
EarI	CTCTTC	2 cut(s)	375, 936
Ecl136II	GAGCTC	3 cut(s)	115, 358, 660
Eco130I	CCWWGG	2 cut(s)	693, 1258
Eco147I	AGGCCT	1 cut(s)	525
Eco24I	GRGCYC	3 cut(s)	117, 360, 662
Eco31I	GGTCTC	2 cut(s)	280, 861
Eco47I	GGWCC	1 cut(s)	697
Eco47III	AGCGCT	1 cut(s)	306
Eco53kI	GAGCTC	3 cut(s)	115, 358, 660
Eco81I	CCTNAGG	1 cut(s)	735
Eco88I	CYCGRG	2 cut(s)	351, 663
EcoICRI	GAGCTC	3 cut(s)	115, 358, 660
EcoT14I	CCWWGG	2 cut(s)	693, 1258
EcoT22I	ATGCAT	2 cut(s)	1080, 1583
EcoT38I	GRGCYC	3 cut(s)	117, 360, 662
ErhI	CCWWGG	2 cut(s)	693, 1258
FbaI	TGATCA	1 cut(s)	961
FblI	GTMKAC	2 cut(s)	614, 676
Fnu4HI	GCNGC	2 cut(s)	930, 1225
FokI	GGATG	1 cut(s)	559
FriOI	GRGCYC	3 cut(s)	117, 360, 662
Fsp4HI	GCNGC	2 cut(s)	930, 1225
FspBI	CTAG	5 cut(s)	855, 1127, 1199, 1209, 1229
GlaI	GCGC	3 cut(s)	199, 306, 538
GluI	GCNGC	2 cut(s)	930, 1225
GsaI	CCCAGC	1 cut(s)	512
HaeII	RGCGCY	1 cut(s)	308
HaeIII	GGCC	8 cut(s)	34, 377, 402, 525, 796, 998, 1337, 1521
HapII	CCGG	6 cut(s)	329, 352, 391, 700, 1000, 1375
HgaI	GACGC	1 cut(s)	1497
HhaI	GCGC	3 cut(s)	200, 307, 539
Hin6I	GCGC	3 cut(s)	198, 305, 537
HinP1I	GCGC	3 cut(s)	198, 305, 537
HinfI	GANTC	6 cut(s)	5, 766, 944, 1148, 1212, 1469
HpaII	CCGG	6 cut(s)	329, 352, 391, 700, 1000, 1375
HphI	GGTGA	1 cut(s)	64
Hpy166II	GTNNAC	6 cut(s)	222, 319, 615, 677, 755, 1422
Hpy188I	TCNGA	3 cut(s)	73, 707, 1271
Hpy8I	GTNNAC	6 cut(s)	222, 319, 615, 677, 755, 1422
HpyAV	CCTTC	5 cut(s)	423, 507, 581, 641, 1541
HpyCH4III	ACNGT	5 cut(s)	247, 619, 762, 1306, 1567
HpyCH4IV	ACGT	1 cut(s)	216
HpyF10VI	GCNNNNNNNGC	7 cut(s)	561, 973, 1016, 1025, 1088, 1409, 1457
HpyF3I	CTNAG	2 cut(s)	735, 1602
HpySE526I	ACGT	1 cut(s)	216
HspAI	GCGC	3 cut(s)	198, 305, 537
Kpn2I	TCCGGA	2 cut(s)	328, 699
Ksp22I	TGATCA	1 cut(s)	961
Kzo9I	GATC	4 cut(s)	702, 901, 961, 1201
LguI	GCTCTTC	1 cut(s)	375
LmnI	GCTCC	2 cut(s)	112, 355
Lsp1109I	GCAGC	2 cut(s)	916, 1236
LweI	GCATC	4 cut(s)	300, 537, 973, 1460
MaeI	CTAG	5 cut(s)	855, 1127, 1199, 1209, 1229
MaeII	ACGT	1 cut(s)	216
MaeIII	GTNAC	1 cut(s)	1514
MalI	GATC	4 cut(s)	704, 903, 963, 1203
MboI	GATC	4 cut(s)	702, 901, 961, 1201
MboII	GAAGA	8 cut(s)	136, 392, 431, 953, 1089, 1229, 1321, 1464
MflI	RGATCY	1 cut(s)	1201
MhlI	GDGCHC	3 cut(s)	117, 360, 662
MluCI	AATT	8 cut(s)	102, 456, 606, 775, 1083, 1329, 1496, 1555
MlyI	GAGTC	3 cut(s)	14, 953, 1206
MmeI	TCCRAC	1 cut(s)	1342
MnlI	CCTC	8 cut(s)	523, 730, 1000, 1059, 1265, 1267, 1423, 1584
Mph1103I	ATGCAT	2 cut(s)	1080, 1583
MroI	TCCGGA	2 cut(s)	328, 699
MseI	TTAA	4 cut(s)	1188, 1251, 1328, 1394
MslI	CAYNNNNRTG	2 cut(s)	154, 215
MspI	CCGG	6 cut(s)	329, 352, 391, 700, 1000, 1375
MspR9I	CCNGG	4 cut(s)	352, 353, 392, 1000
Mva1269I	GAATGC	3 cut(s)	447, 539, 1550
MwoI	GCNNNNNNNGC	7 cut(s)	561, 973, 1016, 1025, 1088, 1409, 1457
NciI	CCSGG	4 cut(s)	352, 353, 392, 1000
NcoI	CCATGG	1 cut(s)	1258
NdeII	GATC	4 cut(s)	702, 901, 961, 1201
NlaIV	GGNNCC	2 cut(s)	35, 1338
NmuCI	GTSAC	1 cut(s)	1514
NsiI	ATGCAT	2 cut(s)	1080, 1583
NspI	RCATGY	2 cut(s)	437, 1082
PaeI	GCATGC	1 cut(s)	1082
PaeR7I	CTCGAG	1 cut(s)	663
PceI	AGGCCT	1 cut(s)	525
PciSI	GCTCTTC	1 cut(s)	375
PcsI	WCGNNNNNNNCGW	1 cut(s)	670
PctI	GAATGC	3 cut(s)	447, 539, 1550
PfeI	GAWTC	3 cut(s)	766, 1148, 1469
PflMI	CCANNNNNTGG	1 cut(s)	848
PkrI	GCNGC	2 cut(s)	931, 1226
PleI	GAGTC	3 cut(s)	13, 952, 1206
PpsI	GAGTC	3 cut(s)	13, 952, 1206
PshBI	ATTAAT	1 cut(s)	1188
Psp124BI	GAGCTC	3 cut(s)	117, 360, 662
PspFI	CCCAGC	1 cut(s)	508
PspN4I	GGNNCC	2 cut(s)	35, 1338
PspPI	GGNCC	6 cut(s)	33, 375, 400, 697, 997, 1336
PsuI	RGATCY	1 cut(s)	1201
RsaI	GTAC	4 cut(s)	65, 756, 1564, 1569
RsaNI	GTAC	4 cut(s)	64, 755, 1563, 1568
RseI	CAYNNNNRTG	2 cut(s)	154, 215
SacI	GAGCTC	3 cut(s)	117, 360, 662
SapI	GCTCTTC	1 cut(s)	375
SaqAI	TTAA	4 cut(s)	1188, 1251, 1328, 1394
SatI	GCNGC	2 cut(s)	930, 1225
Sau3AI	GATC	4 cut(s)	702, 901, 961, 1201
Sau96I	GGNCC	6 cut(s)	33, 375, 400, 697, 997, 1336
ScaI	AGTACT	1 cut(s)	1569
SchI	GAGTC	3 cut(s)	14, 953, 1206
ScrFI	CCNGG	4 cut(s)	352, 353, 392, 1000
SduI	GDGCHC	3 cut(s)	117, 360, 662
SfaNI	GCATC	4 cut(s)	300, 537, 973, 1460
SfcI	CTRYAG	1 cut(s)	636
Sfr274I	CTCGAG	1 cut(s)	663
SinI	GGWCC	1 cut(s)	697
SlaI	CTCGAG	1 cut(s)	663
SmaI	CCCGGG	1 cut(s)	353
SmiMI	CAYNNNNRTG	2 cut(s)	154, 215
SmlI	CTYRAG	4 cut(s)	365, 414, 527, 663
SmoI	CTYRAG	4 cut(s)	365, 414, 527, 663
SphI	GCATGC	1 cut(s)	1082
Sse9I	AATT	8 cut(s)	102, 456, 606, 775, 1083, 1329, 1496, 1555
SseBI	AGGCCT	1 cut(s)	525
SsiI	CCGC	1 cut(s)	138
SspMI	CTAG	5 cut(s)	855, 1127, 1199, 1209, 1229
SstI	GAGCTC	3 cut(s)	117, 360, 662
StuI	AGGCCT	1 cut(s)	525
StyD4I	CCNGG	4 cut(s)	350, 351, 390, 998
StyI	CCWWGG	2 cut(s)	693, 1258
TaaI	ACNGT	5 cut(s)	247, 619, 762, 1306, 1567
TaiI	ACGT	1 cut(s)	219
TaqI	TCGA	6 cut(s)	664, 1151, 1215, 1281, 1534, 1586
TasI	AATT	8 cut(s)	102, 456, 606, 775, 1083, 1329, 1496, 1555
TatI	WGTACW	3 cut(s)	63, 1562, 1567
TfiI	GAWTC	3 cut(s)	766, 1148, 1469
Tru1I	TTAA	4 cut(s)	1188, 1251, 1328, 1394
Tru9I	TTAA	4 cut(s)	1188, 1251, 1328, 1394
TscAI	CASTG	3 cut(s)	765, 964, 1552
TseFI	GTSAC	1 cut(s)	1514
TseI	GCWGC	2 cut(s)	929, 1224
Tsp45I	GTSAC	1 cut(s)	1514
TspDTI	ATGAA	7 cut(s)	172, 199, 468, 581, 612, 888, 1074
TspMI	CCCGGG	1 cut(s)	351
TspRI	CASTG	3 cut(s)	765, 964, 1552
Van91I	CCANNNNNTGG	1 cut(s)	848
VpaK11BI	GGWCC	1 cut(s)	697
VspI	ATTAAT	1 cut(s)	1188
XapI	RAATTY	2 cut(s)	775, 1496
XbaI	TCTAGA	2 cut(s)	1198, 1208
XceI	RCATGY	2 cut(s)	437, 1082
XhoI	CTCGAG	1 cut(s)	663
XmaI	CCCGGG	1 cut(s)	351
XmiI	GTMKAC	2 cut(s)	614, 676
XspI	CTAG	5 cut(s)	855, 1127, 1199, 1209, 1229
ZrmI	AGTACT	1 cut(s)	1569
Zsp2I	ATGCAT	2 cut(s)	1080, 1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.