Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007323

Physical Location & Seq

Genomic Coordinates Reverse (-)

29819512 .. 29822405

Gene Structure 2894 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGGGATATAAATCAGGCCGTGGTAGTGTGTCTTCTAAAGTACCCATTCGCAAATTAAATGCCAATGATGATTTGGCCTCTTACACTTTGAACGCAGATCAAGCAGATGAAAAATTTGACTCCAATTGTGTTGAAGTCCCTTTAAAAGATACTAATTTACAGAACAGAGAAGAGTCAAGTGGTATATTTCCTCAGAAAAGGGTGATGGATCTCTCTTATGCTAGCTCCAAATCACAGAAGACAAATCCGGGTGCAAAATCAGGCAGTATGCATAGTCCTTCATCTAGTATTAGATCTCCAAAAGTAAAGCCTACATCTTTGATTGATGGTTCATGCGAGACTACTAGCCATTATATCGTTGCAAAAGATGACTACTCTCTGGATAAAACTGGCAATTTGAATGCTGCAGGAAATTCAAGTGCTTTGACTTTCTCTGCCGCTGCGATCTCAAACACGGGGAAAGATGAAAATACAAACACGAAATCATCTCCAACCACTTTTCGAAGATTAAGAAAATCCAGCTTATCCAGCAAGCCTGGCATTGCAGATTCTGCTGAGGAAAAGACTACAACTGCGGTCAGCAAAACGGTGGAACTGCAAAATCAGCCCCAAAATGTGGGGGGTTCATCTCCAAGTAATGAAAATTCGGTGAATAATAGTTCCAACGACCCTGCTAGTCTGAACTTGCTTAAAGAGAGAAATAATGACTTGGTAACAAAACATCTTAAGCAGAAGGTGAAGTCCAAGAAGACTCTAGGTTCTTGGCCTAAGTTAGTTTCTGCTAGCCAAAAGGGGTCTGTGCACTTATATAAAGATGCCTCCTTAAATGATACTAAAAAATCCCCTGATCCCACGAAGCTTGGTGTGCTCTGTCCAGATGTTAATTTTGAGCCCCCAAACGAGGTGGAGGGAAAAGATGTTAACATGTCTGCAGATGTTGCTGAGAAAAACAGTGAATCTATGGATGATGAAACTGAGGCTCCGGAGGAAGAAAGTGAACATAAATTGGAGAATGTACTTCATGAAGCTAAGGGTATGGTGGCCCAGGCAACAAGTAAATGTGTTACTATGGATGATAGTTCAGGACAGGAGCAGCACCTACAGGATCACTCTGATGCCTGTGCTCCTCGCGATGTAATGGCCAAGTCAGGATCTGACAACATTTATCTGCTGGTTGAGTCAACTGCAAACGGAAATGCTGTCAAGGGAAAGAAGAACCAAGGGAAAAAGCGTGCTTTGGGTAAAACCAAGCTGAAAACTGTTCCCCCTGTCACGGATGTTGTGAAGCCTAACAAAGTTGTCTCTGAGGAAAATACTCGGAATGATAACACTGGGGTGACAGAGAAGAAACAAGAAAAAAGACGTGCAGGTTTAGTAGGCAAATCTAAGTGCCGTGGTGTGCCCCAAAATAAGTTAGAGAACTCTTCCGAAATGAAGGAGAACAGGCCAACTGTTGGTGGAGATCAAACTGTAAGCAAGTCCAAACAGCAGGCAGAAAAATCAACAGCTAAATCTGATATAACTCCGTTGAAGATAATTCAAACATCTGTGGAGAGAAGTAACAATCCTTCAACACCCGAAGGGAAGGCTCCAAGCAAAGATAAAATTGAACCTGTAAGGTTTATTCTGAGTGGGCACAGATTTCAAAGAAAGGAGTTTCAGAAAGTTGTCAAGCGTTTGAAAGGACAATGTTGCTGGGATTCTCATCACTGGTCTTACCAGGCAACGCACTTCATCTCTCCAGATCGAGTTGGCAGGACAGAAAAGTTTTTTGCAGCTGTAGCGTCTGGAAGGTGGATTCTTAAGAGTGATTATCTGGAAGCTAGTGATAAGGAAGGAAGGTTTTTGGAAGAAGAACCTTATGAATGGTACAAGAATGGTACCATCAATTTGGAGGCCCCAAGGAAGTGGCGGCTCTTGAGAGAGAGAACAGGCCATGGTGCGTTCCACGGAATGCGCATTATCATATATGGTGAATGTATTGCACCACCTTTGGATACTCTGAAGCGTGTCATGAAGGCTGGTGATGGAACAATTTTGGCAACTTCTCCTCCTTACACCCGCTTCCTTAAGTCAGGGGTTGACTATGCCATTGTCAGTCCAGGCATGCCCCATGCCGATATGTGGGTACAAGAGTTGTTGAAGCATGAGATACCCTGCGTTGTGGCCGATTACTTGGTTGAGTACGTGTGCAAACCTGGGCACCGGCTTGACAGACACGTGCTATACAACACCAATGCGTGGGCAGAGAAGTCATTTGAGAGAGTGCAGAGCAGGGCGAAGGACATGGTGGGGGAAGCGTTTACAGGTGAGGATGGTGATGATTCTAGTTGCGGTGGTGGTAGTGATATAGCTTGCGTGGTGTGTGGGTGTGGGGAGAGAGGAGAGGTGATGTTGATATGCGGCAACGAAAGTGGGAGCGTGGGGTGTGGAATTGGTACTCATATCGAGTGCTGCAGTCCACCGCTCGAAAGTATTCCGGAGGATGACTGGTTTTGTCCAAACTGTAGTTGGAGCAAAAACAGCACCAAGTCTTCCAAGAAAAGGAAGAAGGGTTTGTTGGTTGACAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

BRCT PHD PTCB-BRCT

Protein Analysis

858

Amino Acids

93.77

Weight (kDa)

8.55

Isoelectric Point (pI)

40.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007323)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02110 AT4G02110
fragaria_vesca	FvH4_5g39450 FvH4_5g39450 FvH4_5g39450 FvH4_5g39450
malus_domestica	MD03G1296700.v1.1 MD11G1316200.v1.1 MD11G1316300.v1.1
prunus_persica	Prupe.8G270500_v2.0.a1 Prupe.8G270500_v2.0.a1
pyrus_communis	pycom03g23520 pycom11g27600
rosa_chinensis	RchiOBHm_Chr7g0241761
rosa_laevigata	RLG00000000546
rosa_multiflora	Rmu_co8474925.1_g000001 Rmu_sc0010095.1_g000004
rosa_roxburghii	Rroxscaffold_3G00218690
rosa_rugosa	Rorug07G0346900 Rorug07G0347000
rosa_samantha	Rh7AG501500 Rh7BG472800 Rh7CG517800 Rh7DG486600
rosa_wichuraiana	Rw7G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1958
Acc36I	ACCTGC	1 cut(s)	1358
Acc65I	GGTACC	1 cut(s)	1880
AccB1I	GGYRCC	2 cut(s)	1880, 2202
AccB7I	CCANNNNNTGG	3 cut(s)	616, 1454, 2241
AccBSI	CCGCTC	1 cut(s)	2467
AccII	CGCG	1 cut(s)	1131
AccIII	TCCGGA	2 cut(s)	982, 2479
AciI	CCGC	7 cut(s)	438, 575, 1912, 2062, 2334, 2403, 2465
AclWI	GGATC	4 cut(s)	216, 842, 1113, 1159
AcoI	YGGCCR	2 cut(s)	1140, 2166
AcsI	RAATTY	3 cut(s)	113, 412, 643
AcuI	CTGAAG	1 cut(s)	2024
AcvI	CACGTG	1 cut(s)	2221
AfaI	GTAC	7 cut(s)	42, 1017, 1871, 1882, 2130, 2186, 2440
AfiI	CCNNNNNNNGG	7 cut(s)	616, 901, 1273, 1454, 2124, 2241, 2544
AflII	CTTAAG	3 cut(s)	725, 1802, 2069
AflIII	ACRYGT	3 cut(s)	924, 2187, 2218
AjiI	CACGTC	1 cut(s)	1364
AjnI	CCWGG	5 cut(s)	535, 1044, 1719, 2101, 2197
AjuI	GAANNNNNNNTTGG	1 cut(s)	2543
AleI	CACNNNNGTG	1 cut(s)	1334
AluBI	AGCT	9 cut(s)	225, 522, 859, 1028, 1252, 1508, 1778, 1823, 2354
AluI	AGCT	9 cut(s)	225, 522, 859, 1028, 1252, 1508, 1778, 1823, 2354
Alw21I	GWGCWC	3 cut(s)	804, 870, 1126
Alw26I	GTCTC	2 cut(s)	332, 1306
Alw44I	GTGCAC	1 cut(s)	800
AlwI	GGATC	4 cut(s)	216, 842, 1113, 1159
AlwNI	CAGNNNCTG	2 cut(s)	551, 1154
Aor13HI	TCCGGA	2 cut(s)	982, 2479
AoxI	GGCC	9 cut(s)	16, 75, 764, 1041, 1140, 1445, 1896, 1933, 2166
ApaLI	GTGCAC	1 cut(s)	800
ApeKI	GCWGC	5 cut(s)	404, 440, 1093, 1775, 2454
ApoI	RAATTY	3 cut(s)	113, 412, 643
Asp700I	GAANNNNTTC	1 cut(s)	2475
Asp718I	GGTACC	1 cut(s)	1880
AspLEI	GCGC	1 cut(s)	1959
AspS9I	GGNCC	2 cut(s)	1042, 1897
AsuC2I	CCSGG	1 cut(s)	249
AsuHPI	GGTGA	9 cut(s)	214, 661, 748, 1348, 1985, 2036, 2321, 2330, 2401
AsuII	TTCGAA	1 cut(s)	502
AsuNHI	GCTAGC	2 cut(s)	221, 782
BaeGI	GKGCMC	4 cut(s)	804, 1404, 1638, 2205
BaeI	ACNNNNGTAYC	2 cut(s)	2120, 2153
BalI	TGGCCA	1 cut(s)	1142
BanI	GGYRCC	2 cut(s)	1880, 2202
BanII	GRGCYC	1 cut(s)	894
BarI	GAAGNNNNNNTAC	4 cut(s)	16, 48, 1552, 1584
BbrPI	CACGTG	1 cut(s)	2221
BbsI	GAAGAC	4 cut(s)	24, 245, 755, 2526
Bbv12I	GWGCWC	3 cut(s)	804, 870, 1126
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	5 cut(s)	391, 427, 1105, 1787, 2441
BccI	CCATC	5 cut(s)	199, 320, 1892, 2021, 2309
BceAI	ACGGC	2 cut(s)	3, 1377
BciT130I	CCWGG	5 cut(s)	537, 1046, 1721, 2103, 2199
BciVI	GTATCC	1 cut(s)	1990
BcnI	CCSGG	1 cut(s)	249
BcoDI	GTCTC	2 cut(s)	332, 1306
BfaI	CTAG	8 cut(s)	222, 285, 345, 675, 755, 783, 1824, 2328
BfmI	CTRYAG	6 cut(s)	405, 930, 1100, 1779, 2455, 2506
BfrI	CTTAAG	3 cut(s)	725, 1802, 2069
BfuAI	ACCTGC	1 cut(s)	1358
BfuI	GTATCC	1 cut(s)	1990
BglII	AGATCT	1 cut(s)	293
BisI	GCNGC	8 cut(s)	405, 438, 441, 1094, 1776, 1913, 2404, 2455
BlsI	GCNGC	8 cut(s)	406, 439, 442, 1095, 1777, 1914, 2405, 2456
Bme1390I	CCNGG	6 cut(s)	249, 537, 1046, 1721, 2103, 2199
BmgBI	CACGTC	1 cut(s)	1364
BmgT120I	GGNCC	2 cut(s)	1042, 1897
BmiI	GGNNCC	5 cut(s)	981, 1590, 1882, 1899, 2204
BmrFI	CCNGG	6 cut(s)	249, 537, 1046, 1721, 2103, 2199
BmrI	ACTGGG	1 cut(s)	1341
BmsI	GCATC	2 cut(s)	805, 1105
BmtI	GCTAGC	2 cut(s)	225, 786
BmuI	ACTGGG	1 cut(s)	1341
BpiI	GAAGAC	4 cut(s)	24, 245, 755, 2526
BpmI	CTGGAG	1 cut(s)	1725
Bpu10I	CCTNAGC	2 cut(s)	555, 1029
Bpu14I	TTCGAA	1 cut(s)	502
BpuEI	CTTGAG	1 cut(s)	1939
BpuMI	CCSGG	1 cut(s)	249
BsaAI	YACGTR	2 cut(s)	2188, 2221
BsaBI	GATNNNNATC	2 cut(s)	10, 1704
BsaJI	CCNNGG	8 cut(s)	19, 1044, 1219, 1393, 1901, 1936, 1948, 2198
BsaWI	WCCGGW	2 cut(s)	982, 2479
BsaXI	ACNNNNNCTCC	4 cut(s)	964, 994, 2035, 2065
Bsc4I	CCNNNNNNNGG	7 cut(s)	616, 901, 1273, 1454, 2124, 2241, 2544
Bse118I	RCCGGY	1 cut(s)	2205
Bse1I	ACTGG	4 cut(s)	394, 1336, 1715, 2495
Bse3DI	GCAATG	1 cut(s)	540
Bse8I	GATNNNNATC	2 cut(s)	10, 1704
BseAI	TCCGGA	2 cut(s)	982, 2479
BseBI	CCWGG	5 cut(s)	537, 1046, 1721, 2103, 2199
BseDI	CCNNGG	8 cut(s)	19, 1044, 1219, 1393, 1901, 1936, 1948, 2198
BseGI	GGATG	5 cut(s)	970, 1078, 1282, 2320, 2491
BseJI	GATNNNNATC	2 cut(s)	10, 1704
BseLI	CCNNNNNNNGG	7 cut(s)	616, 901, 1273, 1454, 2124, 2241, 2544
BseMI	GCAATG	1 cut(s)	540
BseMII	CTCAG	6 cut(s)	206, 546, 933, 966, 1296, 1619
BseNI	ACTGG	4 cut(s)	394, 1336, 1715, 2495
BseRI	GAGGAG	3 cut(s)	1116, 2040, 2397
BseSI	GKGCMC	4 cut(s)	804, 1404, 1638, 2205
BseXI	GCAGC	5 cut(s)	391, 427, 1105, 1787, 2441
BseYI	CCCAGC	1 cut(s)	1695
BsgI	GTGCAG	2 cut(s)	1386, 2288
Bsh1236I	CGCG	1 cut(s)	1131
BshFI	GGCC	9 cut(s)	18, 77, 766, 1043, 1142, 1447, 1898, 1935, 2168
BshNI	GGYRCC	2 cut(s)	1880, 2202
BsiHKAI	GWGCWC	3 cut(s)	804, 870, 1126
BsiSI	CCGG	4 cut(s)	248, 983, 2206, 2480
BslFI	GGGAC	1 cut(s)	122
BslI	CCNNNNNNNGG	7 cut(s)	616, 901, 1273, 1454, 2124, 2241, 2544
BsmAI	GTCTC	2 cut(s)	332, 1306
BsmFI	GGGAC	1 cut(s)	122
BsmI	GAATGC	2 cut(s)	406, 1959
BsnI	GGCC	9 cut(s)	18, 77, 766, 1043, 1142, 1447, 1898, 1935, 2168
Bsp119I	TTCGAA	1 cut(s)	502
Bsp1286I	GDGCHC	7 cut(s)	804, 870, 894, 1126, 1404, 1638, 2205
Bsp13I	TCCGGA	2 cut(s)	982, 2479
Bsp143I	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
Bsp19I	CCATGG	1 cut(s)	1936
Bsp68I	TCGCGA	1 cut(s)	1131
BspACI	CCGC	7 cut(s)	438, 575, 1912, 2062, 2334, 2403, 2465
BspANI	GGCC	9 cut(s)	18, 77, 766, 1043, 1142, 1447, 1898, 1935, 2168
BspCNI	CTCAG	6 cut(s)	205, 547, 934, 967, 1297, 1620
BspEI	TCCGGA	2 cut(s)	982, 2479
BspFNI	CGCG	1 cut(s)	1131
BspHI	TCATGA	2 cut(s)	1021, 2013
BspLI	GGNNCC	5 cut(s)	981, 1590, 1882, 1899, 2204
BspMAI	CTGCAG	3 cut(s)	409, 934, 2459
BspMI	ACCTGC	1 cut(s)	1358
BspOI	GCTAGC	2 cut(s)	225, 786
BspPI	GGATC	4 cut(s)	216, 842, 1113, 1159
BspT104I	TTCGAA	1 cut(s)	502
BspT107I	GGYRCC	2 cut(s)	1880, 2202
BspTI	CTTAAG	3 cut(s)	725, 1802, 2069
BsrBI	CCGCTC	1 cut(s)	2467
BsrDI	GCAATG	1 cut(s)	540
BsrFI	RCCGGY	1 cut(s)	2205
BsrI	ACTGG	4 cut(s)	394, 1336, 1715, 2495
BssAI	RCCGGY	1 cut(s)	2205
BssECI	CCNNGG	8 cut(s)	19, 1044, 1219, 1393, 1901, 1936, 1948, 2198
BssMI	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
BssT1I	CCWWGG	3 cut(s)	1219, 1901, 1936
Bst2UI	CCWGG	5 cut(s)	537, 1046, 1721, 2103, 2199
Bst4CI	ACNGT	7 cut(s)	589, 953, 1261, 1453, 1471, 2507, 2570
Bst6I	CTCTTC	2 cut(s)	165, 1429
BstAFI	CTTAAG	3 cut(s)	725, 1802, 2069
BstAPI	GCANNNNNTGC	2 cut(s)	551, 938
BstBAI	YACGTR	2 cut(s)	2188, 2221
BstBI	TTCGAA	1 cut(s)	502
BstC8I	GCNNGC	7 cut(s)	223, 533, 784, 1233, 1491, 2108, 2356
BstDEI	CTNAG	9 cut(s)	192, 555, 768, 942, 975, 1029, 1305, 1386, 1628
BstDSI	CCRYGG	4 cut(s)	19, 1393, 1936, 1948
BstF5I	GGATG	5 cut(s)	970, 1078, 1282, 2320, 2491
BstFNI	CGCG	1 cut(s)	1131
BstHHI	GCGC	1 cut(s)	1959
BstKTI	GATC	9 cut(s)	100, 211, 296, 447, 850, 1108, 1154, 1465, 1747
BstMAI	GTCTC	2 cut(s)	332, 1306
BstMBI	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 528, 537, 551, 604, 865, 938, 1781, 2523
BstNI	CCWGG	5 cut(s)	537, 1046, 1721, 2103, 2199
BstNSI	RCATGY	2 cut(s)	928, 2110
BstSCI	CCNGG	6 cut(s)	247, 535, 1044, 1719, 2101, 2197
BstSFI	CTRYAG	6 cut(s)	405, 930, 1100, 1779, 2455, 2506
BstSLI	GKGCMC	4 cut(s)	804, 1404, 1638, 2205
BstUI	CGCG	1 cut(s)	1131
BstV1I	GCAGC	5 cut(s)	391, 427, 1105, 1787, 2441
BstV2I	GAAGAC	4 cut(s)	24, 245, 755, 2526
BstX2I	RGATCY	3 cut(s)	208, 293, 1151
BstXI	CCANNNNNNTGG	2 cut(s)	1891, 1908
BstYI	RGATCY	3 cut(s)	208, 293, 1151
BsuI	GTATCC	1 cut(s)	1990
BsuRI	GGCC	9 cut(s)	18, 77, 766, 1043, 1142, 1447, 1898, 1935, 2168
BtgI	CCRYGG	4 cut(s)	19, 1393, 1936, 1948
BtgZI	GCGATG	1 cut(s)	1146
BtrI	CACGTC	1 cut(s)	1364
BtsCI	GGATG	5 cut(s)	970, 1078, 1282, 2320, 2491
BtsIMutI	CAGTG	3 cut(s)	958, 1329, 1708
BtuMI	TCGCGA	1 cut(s)	1131
BveI	ACCTGC	1 cut(s)	1358
Cac8I	GCNNGC	7 cut(s)	223, 533, 784, 1233, 1491, 2108, 2356
CaiI	CAGNNNCTG	2 cut(s)	551, 1154
CciI	TCATGA	2 cut(s)	1021, 2013
CfoI	GCGC	1 cut(s)	1959
Cfr10I	RCCGGY	1 cut(s)	2205
Cfr13I	GGNCC	2 cut(s)	1042, 1897
CseI	GACGC	1 cut(s)	1773
Csp6I	GTAC	7 cut(s)	41, 1016, 1870, 1881, 2129, 2185, 2439
CspCI	CAANNNNNGTGG	6 cut(s)	841, 876, 885, 920, 2395, 2430
CviAII	CATG	9 cut(s)	333, 925, 1022, 1937, 2014, 2107, 2114, 2147, 2287
CviQI	GTAC	7 cut(s)	41, 1016, 1870, 1881, 2129, 2185, 2439
DdeI	CTNAG	9 cut(s)	192, 555, 768, 942, 975, 1029, 1305, 1386, 1628
DpnI	GATC	9 cut(s)	99, 210, 295, 446, 849, 1107, 1153, 1464, 1746
DpnII	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
DraI	TTTAAA	1 cut(s)	144
EaeI	YGGCCR	2 cut(s)	1140, 2166
Eam1104I	CTCTTC	2 cut(s)	165, 1429
EarI	CTCTTC	2 cut(s)	165, 1429
Eco130I	CCWWGG	3 cut(s)	1219, 1901, 1936
Eco24I	GRGCYC	1 cut(s)	894
Eco57I	CTGAAG	1 cut(s)	2024
Eco72I	CACGTG	1 cut(s)	2221
EcoO109I	RGGNCCY	1 cut(s)	1897
EcoRII	CCWGG	5 cut(s)	535, 1044, 1719, 2101, 2197
EcoT14I	CCWWGG	3 cut(s)	1219, 1901, 1936
EcoT22I	ATGCAT	1 cut(s)	273
EcoT38I	GRGCYC	1 cut(s)	894
ErhI	CCWWGG	3 cut(s)	1219, 1901, 1936
FaeI	CATG	9 cut(s)	336, 928, 1025, 1940, 2017, 2110, 2117, 2150, 2290
FaqI	GGGAC	1 cut(s)	122
FatI	CATG	9 cut(s)	332, 924, 1021, 1936, 2013, 2106, 2113, 2146, 2286
FauI	CCCGC	1 cut(s)	2069
Fnu4HI	GCNGC	8 cut(s)	405, 438, 441, 1094, 1776, 1913, 2404, 2455
FokI	GGATG	5 cut(s)	977, 1085, 1289, 2327, 2498
FriOI	GRGCYC	1 cut(s)	894
Fsp4HI	GCNGC	8 cut(s)	405, 438, 441, 1094, 1776, 1913, 2404, 2455
FspAI	RTGCGCAY	1 cut(s)	1958
FspBI	CTAG	8 cut(s)	222, 285, 345, 675, 755, 783, 1824, 2328
FspI	TGCGCA	1 cut(s)	1958
GlaI	GCGC	1 cut(s)	1958
GluI	GCNGC	8 cut(s)	405, 438, 441, 1094, 1776, 1913, 2404, 2455
GsaI	CCCAGC	1 cut(s)	1699
GsuI	CTGGAG	1 cut(s)	1725
HaeIII	GGCC	9 cut(s)	18, 77, 766, 1043, 1142, 1447, 1898, 1935, 2168
HapII	CCGG	4 cut(s)	248, 983, 2206, 2480
HgaI	GACGC	1 cut(s)	1773
HhaI	GCGC	1 cut(s)	1959
Hin1II	CATG	9 cut(s)	336, 928, 1025, 1940, 2017, 2110, 2117, 2150, 2290
Hin6I	GCGC	1 cut(s)	1957
HinP1I	GCGC	1 cut(s)	1957
HincII	GTYRAC	4 cut(s)	922, 1182, 2083, 2566
HindII	GTYRAC	4 cut(s)	922, 1182, 2083, 2566
HindIII	AAGCTT	1 cut(s)	857
HinfI	GANTC	9 cut(s)	119, 173, 548, 751, 956, 1178, 1700, 1798, 2324
HpaI	GTTAAC	1 cut(s)	922
HpaII	CCGG	4 cut(s)	248, 983, 2206, 2480
HphI	GGTGA	9 cut(s)	214, 661, 748, 1348, 1985, 2036, 2321, 2330, 2401
Hpy166II	GTNNAC	8 cut(s)	802, 922, 998, 1182, 2083, 2304, 2462, 2566
Hpy8I	GTNNAC	8 cut(s)	802, 922, 998, 1182, 2083, 2304, 2462, 2566
HpyCH4III	ACNGT	7 cut(s)	589, 953, 1261, 1453, 1471, 2507, 2570
HpyCH4IV	ACGT	3 cut(s)	1363, 2187, 2220
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 528, 537, 551, 604, 865, 938, 1781, 2523
HpyF3I	CTNAG	9 cut(s)	192, 555, 768, 942, 975, 1029, 1305, 1386, 1628
HpySE526I	ACGT	3 cut(s)	1363, 2187, 2220
Hsp92II	CATG	9 cut(s)	336, 928, 1025, 1940, 2017, 2110, 2117, 2150, 2290
HspAI	GCGC	1 cut(s)	1957
Kpn2I	TCCGGA	2 cut(s)	982, 2479
KpnI	GGTACC	1 cut(s)	1884
KspAI	GTTAAC	1 cut(s)	922
Kzo9I	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
LmnI	GCTCC	7 cut(s)	230, 985, 1090, 1129, 1594, 2418, 2514
Lsp1109I	GCAGC	5 cut(s)	391, 427, 1105, 1787, 2441
LweI	GCATC	2 cut(s)	805, 1105
MaeI	CTAG	8 cut(s)	222, 285, 345, 675, 755, 783, 1824, 2328
MaeII	ACGT	3 cut(s)	1363, 2187, 2220
MaeIII	GTNAC	5 cut(s)	712, 1063, 1270, 1336, 1559
MalI	GATC	9 cut(s)	99, 210, 295, 446, 849, 1107, 1153, 1464, 1746
MbiI	CCGCTC	1 cut(s)	2467
MboI	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
MfeI	CAATTG	1 cut(s)	124
MflI	RGATCY	3 cut(s)	208, 293, 1151
MhlI	GDGCHC	7 cut(s)	804, 870, 894, 1126, 1404, 1638, 2205
MlsI	TGGCCA	1 cut(s)	1142
MluNI	TGGCCA	1 cut(s)	1142
MlyI	GAGTC	4 cut(s)	113, 182, 745, 1187
MmeI	TCCRAC	3 cut(s)	515, 687, 2492
Mox20I	TGGCCA	1 cut(s)	1142
Mph1103I	ATGCAT	1 cut(s)	273
MroI	TCCGGA	2 cut(s)	982, 2479
MroXI	GAANNNNTTC	1 cut(s)	2475
MscI	TGGCCA	1 cut(s)	1142
MslI	CAYNNNNRTG	2 cut(s)	1113, 1334
Msp20I	TGGCCA	1 cut(s)	1142
MspA1I	CMGCKG	2 cut(s)	440, 1778
MspCI	CTTAAG	3 cut(s)	725, 1802, 2069
MspI	CCGG	4 cut(s)	248, 983, 2206, 2480
MspR9I	CCNGG	6 cut(s)	249, 537, 1046, 1721, 2103, 2199
MunI	CAATTG	1 cut(s)	124
Mva1269I	GAATGC	2 cut(s)	406, 1959
MvaI	CCWGG	5 cut(s)	537, 1046, 1721, 2103, 2199
MvnI	CGCG	1 cut(s)	1131
MwoI	GCNNNNNNNGC	9 cut(s)	101, 528, 537, 551, 604, 865, 938, 1781, 2523
NciI	CCSGG	1 cut(s)	249
NcoI	CCATGG	1 cut(s)	1936
NdeII	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
NheI	GCTAGC	2 cut(s)	221, 782
NlaIII	CATG	9 cut(s)	336, 928, 1025, 1940, 2017, 2110, 2117, 2150, 2290
NlaIV	GGNNCC	5 cut(s)	981, 1590, 1882, 1899, 2204
NmuCI	GTSAC	2 cut(s)	1270, 1336
NruI	TCGCGA	1 cut(s)	1131
NsbI	TGCGCA	1 cut(s)	1958
NsiI	ATGCAT	1 cut(s)	273
NspI	RCATGY	2 cut(s)	928, 2110
NspV	TTCGAA	1 cut(s)	502
OliI	CACNNNNGTG	1 cut(s)	1334
PaeI	GCATGC	1 cut(s)	2110
PagI	TCATGA	2 cut(s)	1021, 2013
PciI	ACATGT	1 cut(s)	924
PctI	GAATGC	2 cut(s)	406, 1959
PdmI	GAANNNNTTC	1 cut(s)	2475
PfeI	GAWTC	5 cut(s)	548, 956, 1700, 1798, 2324
PflMI	CCANNNNNTGG	3 cut(s)	616, 1454, 2241
PkrI	GCNGC	8 cut(s)	406, 439, 442, 1095, 1777, 1914, 2405, 2456
PleI	GAGTC	4 cut(s)	113, 181, 745, 1186
PmaCI	CACGTG	1 cut(s)	2221
PmlI	CACGTG	1 cut(s)	2221
PpsI	GAGTC	4 cut(s)	113, 181, 745, 1186
Ppu21I	YACGTR	2 cut(s)	2188, 2221
PscI	ACATGT	1 cut(s)	924
Psp6I	CCWGG	5 cut(s)	535, 1044, 1719, 2101, 2197
PspCI	CACGTG	1 cut(s)	2221
PspFI	CCCAGC	1 cut(s)	1695
PspGI	CCWGG	5 cut(s)	535, 1044, 1719, 2101, 2197
PspN4I	GGNNCC	5 cut(s)	981, 1590, 1882, 1899, 2204
PspPI	GGNCC	2 cut(s)	1042, 1897
PstI	CTGCAG	3 cut(s)	409, 934, 2459
PstNI	CAGNNNCTG	2 cut(s)	551, 1154
PsuI	RGATCY	3 cut(s)	208, 293, 1151
PvuII	CAGCTG	1 cut(s)	1778
RruI	TCGCGA	1 cut(s)	1131
RsaI	GTAC	7 cut(s)	42, 1017, 1871, 1882, 2130, 2186, 2440
RsaNI	GTAC	7 cut(s)	41, 1016, 1870, 1881, 2129, 2185, 2439
RseI	CAYNNNNRTG	2 cut(s)	1113, 1334
SatI	GCNGC	8 cut(s)	405, 438, 441, 1094, 1776, 1913, 2404, 2455
Sau3AI	GATC	9 cut(s)	97, 208, 293, 444, 847, 1105, 1151, 1462, 1744
Sau96I	GGNCC	2 cut(s)	1042, 1897
SchI	GAGTC	4 cut(s)	113, 182, 745, 1187
ScrFI	CCNGG	6 cut(s)	249, 537, 1046, 1721, 2103, 2199
SduI	GDGCHC	7 cut(s)	804, 870, 894, 1126, 1404, 1638, 2205
SfaNI	GCATC	2 cut(s)	805, 1105
SfcI	CTRYAG	6 cut(s)	405, 930, 1100, 1779, 2455, 2506
SfuI	TTCGAA	1 cut(s)	502
SmiMI	CAYNNNNRTG	2 cut(s)	1113, 1334
SmlI	CTYRAG	4 cut(s)	725, 1802, 1918, 2069
SmoI	CTYRAG	4 cut(s)	725, 1802, 1918, 2069
SphI	GCATGC	1 cut(s)	2110
SsiI	CCGC	7 cut(s)	438, 575, 1912, 2062, 2334, 2403, 2465
SspMI	CTAG	8 cut(s)	222, 285, 345, 675, 755, 783, 1824, 2328
StyD4I	CCNGG	6 cut(s)	247, 535, 1044, 1719, 2101, 2197
StyI	CCWWGG	3 cut(s)	1219, 1901, 1936
TaaI	ACNGT	7 cut(s)	589, 953, 1261, 1453, 1471, 2507, 2570
TaiI	ACGT	3 cut(s)	1366, 2190, 2223
TaqI	TCGA	4 cut(s)	502, 1747, 2448, 2469
TatI	WGTACW	1 cut(s)	1015
TauI	GCSGC	3 cut(s)	440, 1915, 2406
TfiI	GAWTC	5 cut(s)	548, 956, 1700, 1798, 2324
TscAI	CASTG	3 cut(s)	958, 1336, 1715
TseFI	GTSAC	2 cut(s)	1270, 1336
TseI	GCWGC	5 cut(s)	404, 440, 1093, 1775, 2454
Tsp45I	GTSAC	2 cut(s)	1270, 1336
TspGWI	ACGGA	4 cut(s)	1206, 1289, 1515, 1965
TspRI	CASTG	3 cut(s)	958, 1336, 1715
Van91I	CCANNNNNTGG	3 cut(s)	616, 1454, 2241
Vha464I	CTTAAG	3 cut(s)	725, 1802, 2069
VneI	GTGCAC	1 cut(s)	800
XapI	RAATTY	3 cut(s)	113, 412, 643
XceI	RCATGY	2 cut(s)	928, 2110
XcmI	CCANNNNNNNNNTGG	2 cut(s)	70, 2508
XmnI	GAANNNNTTC	1 cut(s)	2475
XspI	CTAG	8 cut(s)	222, 285, 345, 675, 755, 783, 1824, 2328
Zsp2I	ATGCAT	1 cut(s)	273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.