Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0004148

Physical Location & Seq

Genomic Coordinates Reverse (-)

12283807 .. 12291176

Gene Structure 7370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g10330.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGTGGATCTGGTGCGGCAAAACAATTTACCGTTTACCGTTGAAAAATTTGTGGGGGAAAAAAAATTGCCGCAGGCTCTTAAAACTGTGTGTGTATTCTTCTCGAACATCCATCCCTCTTTTTTCCCCTTCTTCTTCTGGTTCTTCAATGGCGTCTTCGAGCTCTGGAAGTTCAATTCCCGCTCCAGAGGCTGTTCAAGTTTTGGTTTCGTTACTCGCTGATGAATCTCCCATCGTCAGGCAGGCCTCCATTGCCTCCCTCAAGGACGTTGCTGCTCTAAACCCTCTTCTAGTGCTTGATTGTTGTTCGGCCATTTCGCGAGGAGGGCGTCGGCGTTTTGGTAACATGGCTGGGGTTTTCCAAGTAATGGCATATGGTGTTCGAGCCTTAGACAAGGATGATGTCGACCCTCCTTTCATGGCTAAGCTTGCTAAGATTGCAACGGCCGAAATCATATCCTCGAAGGAGCTCAATGCAGACTGGCAAAGAGCTGCGTCAGCTGTTCTTGTTTCAATCGGCAGACATTTGCCAGACCTAATGATGGAAGAAATTTTTCTTCATTTGCCTGGGCCAAACTCAGCTTTACCAGCTATGGTTCAGATACTAGCAGACTTTGCCCATGCTGATGCATTGCAGTTCACCCCACGATTGAAAGGTGTGCTTTCACGGGTTCTGCCTATTCTTGGAAATGTACGAGATGCCCATCGGCCTATTTTCGCTAATGCTATTAAGTGCTGGTGTCAGGCTGTTTGGCAGTATAGCCTGGATATCCCTTCGCATTCACCTTTGGATGGTGACATCATGTCATTTCTGAATTCTGTTTTTGAGCTTTTATTGAAAGTTTGGGCTGCTTCACGAGATCTAAAGGTTCGCATGTCATCTGTAGATGCATTAGGACAGATGGTTGGCCTTATTAACCGGGCACAATTAAAGGCGGCTTTACCCAGACTTGTCCCCACAATATTGGAATTGTATAAAAGAGATCAAGATATTACCTTTTTGGCAACATGCAGTCTTCACAATCTCTTAAATGCTTCTATACTGTCAGAAAGTGGTCCTCCTTTACTTGATTTTGAGGAGCTTACAATTATTTTATCAACACTCCTGCCGGTGGTTTGCATCAATAATGACAACAAAGAACACTCAGATTTCTCAGTTGGACTGAAGACTTACAACGAAGTTCAGCATTGCTTCCTGACAGTTGGCTTGATATACCCTGAGGATTTATTTGTCTTCCTTATAAATAAATGCAGATTGAAGGAAGAACCTTTGACATTTGGTGCACTATGTGTTCTAAAACATCTCTTACCAAGGTTGTCTGAAGCTTGGCACAGTAAACGGCCTTTTCTTGTTGAAGCTGTACAGTTCTTGATAGATGAGCAAAATTTAGGTGTCCGAAAGGCGCTTTCAGAGTTGATAGTCGTTATGGCTTCTCATTGTTACTTAATTGGTCCATCCGGGGAGCTGTTTGTAGAATATCTTGTGCGTCACTGTTCTTTAACAGATAAGGATAGAAGTGATTTTGAGAGGTCGAAGGATGCATCAGGCAACCCCTATATACCTTTCCAATACAAGAGATCAGAGGTGAAGATTGGGCCAATTTGTCCGACAGAGTTGAGGGCAATCTGTGAAAAGGGCCTTCTTCTGCTGACTATTACGATCCCTGAAATGGAGCATATACTTTGGCCTTTTCTGTTAAAGATGATTATTCCCCAGGCTTATACTGGTGCAGTTGCTATGGTTTGCAGATGCATCTCAGAATTGTGCAGGCATAGAGCATCTAATAGTGATATCATGCTCTCTGAGTGCAAAGCTCGTGCTGATTTGCCAAATCCAGAGGAGCTTTTTGTTCGTTTGGTGGTGCTTTTGCATGATCCTTTAGCAAGGGAGCAGCGGGCGAGTCAGATTTTGACAGTTCTTTGTCATCTGGCGCCTCTCTTTCCAAAAAATATCACCTTGTTTTGGCAAGATGAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cnd1

Protein Analysis

660

Amino Acids

73.46

Weight (kDa)

7.77

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36810 AT2G36810 AT2G36810
fragaria_vesca	FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010 FvH4_6g17010
malus_domestica	MD12G1104900.v1.1 MD12G1105200.v1.1
prunus_persica	Prupe.7G124700_v2.0.a1 Prupe.7G124700_v2.0.a1
pyrus_communis	pycom12g10320 pycom12g10330 pycom12g10430
rosa_chinensis	RchiOBHm_Chr3g0471001
rosa_laevigata	RLG00000024210
rosa_multiflora	Rmu_co8323907.1_g000001 Rmu_co8431237.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410320
rosa_rugosa	Rorug03G0114800
rosa_samantha	Rh3AG164300 Rh3BG190000 Rh3CG179900 Rh3DG186200
rosa_wichuraiana	Rw3G015450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1241
AccB1I	GGYRCC	1 cut(s)	1930
AccB7I	CCANNNNNTGG	1 cut(s)	367
AccBSI	CCGCTC	1 cut(s)	182
AccI	GTMKAC	1 cut(s)	405
AccII	CGCG	1 cut(s)	319
AciI	CCGC	5 cut(s)	15, 70, 180, 935, 1894
AclWI	GGATC	3 cut(s)	14, 1654, 1868
AcoI	YGGCCR	2 cut(s)	309, 444
AcsI	RAATTY	4 cut(s)	46, 549, 814, 1384
AcuI	CTGAAG	2 cut(s)	1184, 1341
AcyI	GRCGYC	3 cut(s)	152, 328, 1931
AdeI	CACNNNGTG	1 cut(s)	1289
AfaI	GTAC	2 cut(s)	693, 1362
AfiI	CCNNNNNNNGG	8 cut(s)	237, 367, 541, 683, 791, 1111, 1669, 1962
AgsI	TTSAA	9 cut(s)	43, 147, 174, 197, 513, 652, 838, 1258, 1355
AhdI	GACNNNNNGTC	1 cut(s)	802
AjnI	CCWGG	3 cut(s)	565, 762, 1713
Alw21I	GWGCWC	4 cut(s)	164, 471, 1285, 1977
Alw44I	GTGCAC	1 cut(s)	1281
AlwI	GGATC	3 cut(s)	14, 1654, 1868
AlwNI	CAGNNNCTG	1 cut(s)	191
ApaLI	GTGCAC	1 cut(s)	1281
ApeKI	GCWGC	4 cut(s)	272, 491, 848, 1891
ApoI	RAATTY	4 cut(s)	46, 549, 814, 1384
Asp700I	GAANNNNTTC	1 cut(s)	552
AspLEI	GCGC	2 cut(s)	1405, 1933
AspS9I	GGNCC	5 cut(s)	569, 1055, 1451, 1595, 1636
AsuC2I	CCSGG	2 cut(s)	920, 1459
AsuHPI	GGTGA	5 cut(s)	631, 774, 806, 1597, 1945
AvaII	GGWCC	2 cut(s)	1055, 1451
AxyI	CCTNAGG	1 cut(s)	1218
BaeGI	GKGCMC	2 cut(s)	925, 1285
BanI	GGYRCC	1 cut(s)	1930
BanII	GRGCYC	3 cut(s)	164, 471, 1977
BauI	CACGAG	2 cut(s)	855, 1815
BbsI	GAAGAC	4 cut(s)	147, 1007, 1172, 1225
Bbv12I	GWGCWC	4 cut(s)	164, 471, 1285, 1977
BbvI	GCAGC	4 cut(s)	259, 478, 835, 1903
BccI	CCATC	7 cut(s)	119, 239, 535, 711, 785, 895, 1462
BceAI	ACGGC	2 cut(s)	459, 1355
BciT130I	CCWGG	3 cut(s)	567, 764, 1715
BcnI	CCSGG	2 cut(s)	920, 1459
BfaI	CTAG	3 cut(s)	290, 605, 1978
BfmI	CTRYAG	1 cut(s)	882
BfoI	RGCGCY	2 cut(s)	1406, 1934
BglII	AGATCT	1 cut(s)	859
BisI	GCNGC	7 cut(s)	16, 70, 273, 492, 849, 936, 1892
BlpI	GCTNAGC	1 cut(s)	423
BlsI	GCNGC	7 cut(s)	17, 71, 274, 493, 850, 937, 1893
Bme1390I	CCNGG	5 cut(s)	567, 764, 920, 1459, 1715
Bme18I	GGWCC	2 cut(s)	1055, 1451
BmeRI	GACNNNNNGTC	1 cut(s)	802
BmgT120I	GGNCC	5 cut(s)	569, 1055, 1451, 1595, 1636
BmiI	GGNNCC	1 cut(s)	1932
BmrFI	CCNGG	5 cut(s)	567, 764, 920, 1459, 1715
BmsI	GCATC	9 cut(s)	616, 688, 877, 1128, 1528, 1550, 1739, 1761, 1787
BpiI	GAAGAC	4 cut(s)	147, 1007, 1172, 1225
BpmI	CTGGAG	1 cut(s)	168
Bpu1102I	GCTNAGC	1 cut(s)	423
BpuEI	CTTGAG	1 cut(s)	245
BpuMI	CCSGG	2 cut(s)	920, 1459
BsaBI	GATNNNNATC	1 cut(s)	702
BsaHI	GRCGYC	3 cut(s)	152, 328, 1931
BsaJI	CCNNGG	4 cut(s)	566, 1310, 1458, 1713
Bsc4I	CCNNNNNNNGG	8 cut(s)	237, 367, 541, 683, 791, 1111, 1669, 1962
Bse118I	RCCGGY	1 cut(s)	1108
Bse1I	ACTGG	2 cut(s)	485, 1729
Bse21I	CCTNAGG	1 cut(s)	1218
Bse3DI	GCAATG	3 cut(s)	249, 629, 1186
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	3 cut(s)	567, 764, 1715
BseDI	CCNNGG	4 cut(s)	566, 1310, 1458, 1713
BseGI	GGATG	6 cut(s)	107, 111, 403, 796, 1454, 1543
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	8 cut(s)	237, 367, 541, 683, 791, 1111, 1669, 1962
BseMI	GCAATG	3 cut(s)	249, 629, 1186
BseMII	CTCAG	6 cut(s)	591, 1158, 1167, 1209, 1770, 1794
BseNI	ACTGG	2 cut(s)	485, 1729
BseRI	GAGGAG	3 cut(s)	336, 1091, 1853
BseSI	GKGCMC	2 cut(s)	925, 1285
BseX3I	CGGCCG	1 cut(s)	444
BseXI	GCAGC	4 cut(s)	259, 478, 835, 1903
BseYI	CCCAGC	1 cut(s)	350
BsgI	GTGCAG	2 cut(s)	1749, 1786
Bsh1236I	CGCG	1 cut(s)	319
Bsh1285I	CGRYCG	1 cut(s)	447
BshNI	GGYRCC	1 cut(s)	1930
BsiEI	CGRYCG	1 cut(s)	447
BsiHKAI	GWGCWC	4 cut(s)	164, 471, 1285, 1977
BsiSI	CCGG	3 cut(s)	919, 1109, 1458
BslFI	GGGAC	1 cut(s)	938
BslI	CCNNNNNNNGG	8 cut(s)	237, 367, 541, 683, 791, 1111, 1669, 1962
BsmFI	GGGAC	1 cut(s)	938
BsmI	GAATGC	1 cut(s)	778
Bsp1286I	GDGCHC	5 cut(s)	164, 471, 925, 1285, 1977
Bsp1407I	TGTACA	1 cut(s)	1360
Bsp143I	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
Bsp1720I	GCTNAGC	1 cut(s)	423
Bsp68I	TCGCGA	1 cut(s)	319
BspACI	CCGC	5 cut(s)	15, 70, 180, 935, 1894
BspCNI	CTCAG	6 cut(s)	590, 1157, 1166, 1210, 1769, 1795
BspFNI	CGCG	1 cut(s)	319
BspLI	GGNNCC	1 cut(s)	1932
BspPI	GGATC	3 cut(s)	14, 1654, 1868
BspT107I	GGYRCC	1 cut(s)	1930
BsrBI	CCGCTC	1 cut(s)	182
BsrDI	GCAATG	3 cut(s)	249, 629, 1186
BsrFI	RCCGGY	1 cut(s)	1108
BsrGI	TGTACA	1 cut(s)	1360
BsrI	ACTGG	2 cut(s)	485, 1729
BssAI	RCCGGY	1 cut(s)	1108
BssECI	CCNNGG	4 cut(s)	566, 1310, 1458, 1713
BssMI	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
BssNI	GRCGYC	3 cut(s)	152, 328, 1931
BssSI	CACGAG	2 cut(s)	855, 1815
BssT1I	CCWWGG	1 cut(s)	1310
Bst2BI	CACGAG	2 cut(s)	855, 1815
Bst2UI	CCWGG	3 cut(s)	567, 764, 1715
Bst4CI	ACNGT	9 cut(s)	32, 39, 87, 1044, 1201, 1334, 1365, 1493, 1915
Bst6I	CTCTTC	1 cut(s)	291
BstACI	GRCGYC	3 cut(s)	152, 328, 1931
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstAUI	TGTACA	1 cut(s)	1360
BstC8I	GCNNGC	5 cut(s)	74, 243, 429, 1769, 1896
BstDEI	CTNAG	9 cut(s)	388, 423, 432, 577, 1144, 1153, 1218, 1756, 1803
BstF5I	GGATG	6 cut(s)	107, 111, 403, 796, 1454, 1543
BstFNI	CGCG	1 cut(s)	319
BstH2I	RGCGCY	2 cut(s)	1406, 1934
BstHHI	GCGC	2 cut(s)	1405, 1933
BstKTI	GATC	6 cut(s)	9, 862, 985, 1580, 1662, 1876
BstMBI	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
BstMCI	CGRYCG	1 cut(s)	447
BstMWI	GCNNNNNNNGC	9 cut(s)	188, 251, 325, 428, 437, 497, 587, 614, 1972
BstNI	CCWGG	3 cut(s)	567, 764, 1715
BstNSI	RCATGY	2 cut(s)	877, 1011
BstSCI	CCNGG	5 cut(s)	565, 762, 918, 1457, 1713
BstSFI	CTRYAG	1 cut(s)	882
BstSLI	GKGCMC	2 cut(s)	925, 1285
BstUI	CGCG	1 cut(s)	319
BstV1I	GCAGC	4 cut(s)	259, 478, 835, 1903
BstV2I	GAAGAC	4 cut(s)	147, 1007, 1172, 1225
BstX2I	RGATCY	2 cut(s)	6, 859
BstXI	CCANNNNNNTGG	1 cut(s)	964
BstYI	RGATCY	2 cut(s)	6, 859
BstZI	CGGCCG	1 cut(s)	444
Bsu36I	CCTNAGG	1 cut(s)	1218
BtsCI	GGATG	6 cut(s)	107, 111, 403, 796, 1454, 1543
BtsIMutI	CAGTG	1 cut(s)	1489
BtuMI	TCGCGA	1 cut(s)	319
Cac8I	GCNNGC	5 cut(s)	74, 243, 429, 1769, 1896
CaiI	CAGNNNCTG	1 cut(s)	191
CfoI	GCGC	2 cut(s)	1405, 1933
Cfr10I	RCCGGY	1 cut(s)	1108
Cfr13I	GGNCC	5 cut(s)	569, 1055, 1451, 1595, 1636
CseI	GACGC	4 cut(s)	141, 317, 483, 1475
Csp6I	GTAC	2 cut(s)	692, 1361
CviAII	CATG	8 cut(s)	346, 418, 620, 802, 874, 1008, 1795, 1871
CviQI	GTAC	2 cut(s)	692, 1361
DdeI	CTNAG	9 cut(s)	388, 423, 432, 577, 1144, 1153, 1218, 1756, 1803
DinI	GGCGCC	1 cut(s)	1932
DpnI	GATC	6 cut(s)	8, 861, 984, 1579, 1661, 1875
DpnII	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
DraIII	CACNNNGTG	1 cut(s)	1289
DriI	GACNNNNNGTC	1 cut(s)	802
EaeI	YGGCCR	2 cut(s)	309, 444
EagI	CGGCCG	1 cut(s)	444
Eam1104I	CTCTTC	1 cut(s)	291
Eam1105I	GACNNNNNGTC	1 cut(s)	802
EarI	CTCTTC	1 cut(s)	291
Ecl136II	GAGCTC	3 cut(s)	162, 469, 1975
EclXI	CGGCCG	1 cut(s)	444
Eco130I	CCWWGG	1 cut(s)	1310
Eco147I	AGGCCT	1 cut(s)	245
Eco24I	GRGCYC	3 cut(s)	164, 471, 1977
Eco32I	GATATC	2 cut(s)	769, 1792
Eco47I	GGWCC	2 cut(s)	1055, 1451
Eco52I	CGGCCG	1 cut(s)	444
Eco53kI	GAGCTC	3 cut(s)	162, 469, 1975
Eco57I	CTGAAG	2 cut(s)	1184, 1341
Eco81I	CCTNAGG	1 cut(s)	1218
EcoICRI	GAGCTC	3 cut(s)	162, 469, 1975
EcoO109I	RGGNCCY	1 cut(s)	1636
EcoRI	GAATTC	1 cut(s)	814
EcoRII	CCWGG	3 cut(s)	565, 762, 1713
EcoRV	GATATC	2 cut(s)	769, 1792
EcoT14I	CCWWGG	1 cut(s)	1310
EcoT22I	ATGCAT	4 cut(s)	631, 892, 1543, 1754
EcoT38I	GRGCYC	3 cut(s)	164, 471, 1977
EgeI	GGCGCC	1 cut(s)	1932
EheI	GGCGCC	1 cut(s)	1932
ErhI	CCWWGG	1 cut(s)	1310
FaeI	CATG	8 cut(s)	349, 421, 623, 805, 877, 1011, 1798, 1874
FalI	AAGNNNNNCTT	2 cut(s)	645, 677
FaqI	GGGAC	1 cut(s)	938
FatI	CATG	8 cut(s)	345, 417, 619, 801, 873, 1007, 1794, 1870
FauI	CCCGC	2 cut(s)	187, 1887
FauNDI	CATATG	1 cut(s)	373
FblI	GTMKAC	1 cut(s)	405
Fnu4HI	GCNGC	7 cut(s)	16, 70, 273, 492, 849, 936, 1892
FokI	GGATG	6 cut(s)	94, 98, 410, 803, 1441, 1550
FriOI	GRGCYC	3 cut(s)	164, 471, 1977
Fsp4HI	GCNGC	7 cut(s)	16, 70, 273, 492, 849, 936, 1892
FspBI	CTAG	3 cut(s)	290, 605, 1978
GlaI	GCGC	2 cut(s)	1404, 1932
GluI	GCNGC	7 cut(s)	16, 70, 273, 492, 849, 936, 1892
GsaI	CCCAGC	1 cut(s)	354
GsuI	CTGGAG	1 cut(s)	168
HaeII	RGCGCY	2 cut(s)	1406, 1934
HapII	CCGG	3 cut(s)	919, 1109, 1458
HgaI	GACGC	4 cut(s)	141, 317, 483, 1475
HhaI	GCGC	2 cut(s)	1405, 1933
Hin1I	GRCGYC	3 cut(s)	152, 328, 1931
Hin1II	CATG	8 cut(s)	349, 421, 623, 805, 877, 1011, 1798, 1874
Hin6I	GCGC	2 cut(s)	1403, 1931
HinP1I	GCGC	2 cut(s)	1403, 1931
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HindIII	AAGCTT	2 cut(s)	425, 1323
HinfI	GANTC	2 cut(s)	224, 1900
HpaII	CCGG	3 cut(s)	919, 1109, 1458
HphI	GGTGA	5 cut(s)	631, 774, 806, 1597, 1945
Hpy166II	GTNNAC	5 cut(s)	35, 406, 639, 1283, 1337
Hpy188III	TCNNGA	9 cut(s)	102, 165, 185, 318, 855, 986, 1195, 1369, 1835
Hpy8I	GTNNAC	5 cut(s)	35, 406, 639, 1283, 1337
Hpy99I	CGWCG	1 cut(s)	333
HpyAV	CCTTC	6 cut(s)	138, 457, 783, 1252, 1528, 1649
HpyCH4III	ACNGT	9 cut(s)	32, 39, 87, 1044, 1201, 1334, 1365, 1493, 1915
HpyCH4IV	ACGT	1 cut(s)	267
HpyF10VI	GCNNNNNNNGC	9 cut(s)	188, 251, 325, 428, 437, 497, 587, 614, 1972
HpyF3I	CTNAG	9 cut(s)	388, 423, 432, 577, 1144, 1153, 1218, 1756, 1803
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	3 cut(s)	152, 328, 1931
Hsp92II	CATG	8 cut(s)	349, 421, 623, 805, 877, 1011, 1798, 1874
HspAI	GCGC	2 cut(s)	1403, 1931
KasI	GGCGCC	1 cut(s)	1930
Kzo9I	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
LmnI	GCTCC	7 cut(s)	187, 466, 1078, 1462, 1672, 1840, 1888
Lsp1109I	GCAGC	4 cut(s)	259, 478, 835, 1903
LweI	GCATC	9 cut(s)	616, 688, 877, 1128, 1528, 1550, 1739, 1761, 1787
MaeI	CTAG	3 cut(s)	290, 605, 1978
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	5 cut(s)	210, 341, 794, 1439, 1487
MalI	GATC	6 cut(s)	8, 861, 984, 1579, 1661, 1875
MbiI	CCGCTC	1 cut(s)	182
MboI	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
MflI	RGATCY	2 cut(s)	6, 859
MhlI	GDGCHC	5 cut(s)	164, 471, 925, 1285, 1977
Mly113I	GGCGCC	1 cut(s)	1931
MlyI	GAGTC	1 cut(s)	1909
MmeI	TCCRAC	2 cut(s)	1138, 1631
Mph1103I	ATGCAT	4 cut(s)	631, 892, 1543, 1754
MroXI	GAANNNNTTC	1 cut(s)	552
MseI	TTAA	8 cut(s)	80, 729, 915, 929, 1028, 1445, 1499, 1697
MslI	CAYNNNNRTG	1 cut(s)	624
MspA1I	CMGCKG	2 cut(s)	500, 1894
MspI	CCGG	3 cut(s)	919, 1109, 1458
MspR9I	CCNGG	5 cut(s)	567, 764, 920, 1459, 1715
Mva1269I	GAATGC	1 cut(s)	778
MvaI	CCWGG	3 cut(s)	567, 764, 1715
MvnI	CGCG	1 cut(s)	319
MwoI	GCNNNNNNNGC	9 cut(s)	188, 251, 325, 428, 437, 497, 587, 614, 1972
NarI	GGCGCC	1 cut(s)	1931
NciI	CCSGG	2 cut(s)	920, 1459
NdeI	CATATG	1 cut(s)	373
NdeII	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
NlaIII	CATG	8 cut(s)	349, 421, 623, 805, 877, 1011, 1798, 1874
NlaIV	GGNNCC	1 cut(s)	1932
NmuCI	GTSAC	2 cut(s)	794, 1487
NruI	TCGCGA	1 cut(s)	319
NsiI	ATGCAT	4 cut(s)	631, 892, 1543, 1754
NspI	RCATGY	2 cut(s)	877, 1011
PceI	AGGCCT	1 cut(s)	245
PctI	GAATGC	1 cut(s)	778
PdmI	GAANNNNTTC	1 cut(s)	552
PfeI	GAWTC	1 cut(s)	224
PflMI	CCANNNNNTGG	1 cut(s)	367
PkrI	GCNGC	7 cut(s)	17, 71, 274, 493, 850, 937, 1893
PleI	GAGTC	1 cut(s)	1908
PluTI	GGCGCC	1 cut(s)	1934
PpsI	GAGTC	1 cut(s)	1908
PsiI	TTATAA	1 cut(s)	1241
Psp124BI	GAGCTC	3 cut(s)	164, 471, 1977
Psp6I	CCWGG	3 cut(s)	565, 762, 1713
PspFI	CCCAGC	1 cut(s)	350
PspGI	CCWGG	3 cut(s)	565, 762, 1713
PspN4I	GGNNCC	1 cut(s)	1932
PspPI	GGNCC	5 cut(s)	569, 1055, 1451, 1595, 1636
PstNI	CAGNNNCTG	1 cut(s)	191
PsuI	RGATCY	2 cut(s)	6, 859
PvuII	CAGCTG	1 cut(s)	500
RruI	TCGCGA	1 cut(s)	319
RsaI	GTAC	2 cut(s)	693, 1362
RsaNI	GTAC	2 cut(s)	692, 1361
RseI	CAYNNNNRTG	1 cut(s)	624
SacI	GAGCTC	3 cut(s)	164, 471, 1977
SalI	GTCGAC	1 cut(s)	404
SaqAI	TTAA	8 cut(s)	80, 729, 915, 929, 1028, 1445, 1499, 1697
SatI	GCNGC	7 cut(s)	16, 70, 273, 492, 849, 936, 1892
Sau3AI	GATC	6 cut(s)	6, 859, 982, 1577, 1659, 1873
Sau96I	GGNCC	5 cut(s)	569, 1055, 1451, 1595, 1636
SchI	GAGTC	1 cut(s)	1909
ScrFI	CCNGG	5 cut(s)	567, 764, 920, 1459, 1715
SduI	GDGCHC	5 cut(s)	164, 471, 925, 1285, 1977
SfaNI	GCATC	9 cut(s)	616, 688, 877, 1128, 1528, 1550, 1739, 1761, 1787
SfcI	CTRYAG	1 cut(s)	882
SfoI	GGCGCC	1 cut(s)	1932
SinI	GGWCC	2 cut(s)	1055, 1451
SmiMI	CAYNNNNRTG	1 cut(s)	624
SmlI	CTYRAG	1 cut(s)	260
SmoI	CTYRAG	1 cut(s)	260
SseBI	AGGCCT	1 cut(s)	245
SsiI	CCGC	5 cut(s)	15, 70, 180, 935, 1894
SspDI	GGCGCC	1 cut(s)	1930
SspI	AATATT	1 cut(s)	963
SspMI	CTAG	3 cut(s)	290, 605, 1978
SstI	GAGCTC	3 cut(s)	164, 471, 1977
StuI	AGGCCT	1 cut(s)	245
StyD4I	CCNGG	5 cut(s)	565, 762, 918, 1457, 1713
StyI	CCWWGG	1 cut(s)	1310
TaaI	ACNGT	9 cut(s)	32, 39, 87, 1044, 1201, 1334, 1365, 1493, 1915
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	6 cut(s)	103, 158, 382, 405, 461, 1532
TatI	WGTACW	1 cut(s)	1360
TauI	GCSGC	3 cut(s)	18, 72, 938
TfiI	GAWTC	1 cut(s)	224
Tru1I	TTAA	8 cut(s)	80, 729, 915, 929, 1028, 1445, 1499, 1697
Tru9I	TTAA	8 cut(s)	80, 729, 915, 929, 1028, 1445, 1499, 1697
TscAI	CASTG	1 cut(s)	1496
TseFI	GTSAC	2 cut(s)	794, 1487
TseI	GCWGC	4 cut(s)	272, 491, 848, 1891
Tsp45I	GTSAC	2 cut(s)	794, 1487
TspDTI	ATGAA	3 cut(s)	237, 406, 548
TspRI	CASTG	1 cut(s)	1496
Van91I	CCANNNNNTGG	1 cut(s)	367
VneI	GTGCAC	1 cut(s)	1281
VpaK11BI	GGWCC	2 cut(s)	1055, 1451
XapI	RAATTY	4 cut(s)	46, 549, 814, 1384
XceI	RCATGY	2 cut(s)	877, 1011
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1721
XmiI	GTMKAC	1 cut(s)	405
XmnI	GAANNNNTTC	1 cut(s)	552
XspI	CTAG	3 cut(s)	290, 605, 1978
Zsp2I	ATGCAT	4 cut(s)	631, 892, 1543, 1754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.