Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0014545

Physical Location & Seq

Genomic Coordinates Reverse (-)

14707749 .. 14710026

Gene Structure 2278 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGAAAAGATTAAAATCCCCACTACCGTTGACATTCCATAAGAGTCAACCAAGTCAACCTCCATCTCTTTTACCAAACTTCAACAACGAACAGTTTAGCAACAACTACATAATCTCCTTGTGCAAGCAAAAGCTTTACAGAGAAGCCATTGAAGCATTTGAGTTTTTACAAGGTCAAACGAACTTCCCAATATTTCCCAGCACTTACACAAATTTGGTTTATGCTTGCTCGTCTTTGAGGTCTCTCGAATACGGCCGGAGAATCCATGGCCATATTTTGGCATCCAATTACCAGCCGGACATTGTTTTTCAGAATCATGTTCTCAACATGTATGGAAAATGTGGGTCGTTCGCGGAAGCACGCAAGGTTTTCGATGCAATGCCTGAAAGAAATGTTGTTTCTTGGACTTCACTGATTTCTGGGTACTCTCAGAATAGTCAAGAGGATAAAGCCATTGAATTGTATTTCCAAATGCTGAGGGCAGGTTGTGTTCCTGATCACTTCACCTTTGGAAGTGTCCTAAAAGCTTGTTCGGGTTTGCGGAATGAACTGCTGGGGAGACAGCTGCATGCCCATGTTGTTAAATCAGAAACTGGTTCTCACCCTATAGCACAGAATGCCCTTACTTCAATGTACGCGAAGTTCGGTCTGATTGCAGATGCTTTTGATGTCTTTTCTCGTGTTCCAACAAAGGACTTGATTTCTTGGGGTTCGATGATTGCAGGGTTTTCCCAGCTTGGTTATGAAAAAGAAGCTTTGGATCACTTCAAAGACATGCTCTTTCAGGGTGCTTACCGGCCGAATGAGTTTATATTTGGGAGTGCTTTCAGTGCGTGTGGAGGCCTTCTTGAACCTGAATATGGAAAGCAGATACATGGGATGTGCATAAAATTTGGTTTGGGGAGAGACATCTTTGCTGGATGCTCCCTTTGTGACATGTATGCAAAATGTGGGCAATTGGAATCTGCAAGAACAGTGTTTTATCAGATGGACAGGCCCGATTTAGTGTCCTGGAATGCAATTATATCCGGGTTTTCGAATGCTGGAGATTCTCATGAAGCATTATCATTCTTTTCTCAGATGCGGCATAAGGGACTGATCCCCGACGAAGTTAGTGTTCTTCCCATACTAACTGCTTGCACAAGCCCTTCAACACTCTATCAGGGTGAGCAGATCCACTCCTACATTATCAAGAGGGCCTTTGATTTTACCGTTATTGTATGCAACAGTTTGCTAACCATGTATGCTAAGTGTTCAAATCTCTATGATGCATTTCTTGTGTTTGAAGATATAAGAAATGACGCTGATTTAGTTACTTGGAATGCTATTATTAGTGCGTGCATGCAGCACAACCGGGCCGGGGAGGTTTTCAGATTACTAAATTTAATGCGTATTTCTGAAACTACGCCTGATCATATTACTTTGGGTAATTTGATTGGAGCATGTGCAAATATATCATCTTTAGAGGTTGGGAATCAGATTCATTGCTTTACTGTAAAAAGTGGGATTGTGCTTGATGTTACTGTCAGCAATGGATTAATTGACATGTATACAAAGTGTGGATCGATCTGGAAGTGCGCAAAAGCTCTTCGGCTGGATGGAGGATCCAGATGTTGTCTCGTGGAAATGACGGAATTGGGCATAAAACCCAATGAAGTTACACTGGTGGGTGTCCTTACTGCTTGCAGTCATATTGGACTGGTAGAAGAAGGATGGAAAATATATAAAACCATGGAATCCGAGCATGGGATTGTACCGACGATAGAGCATTGTTCTTGTATGGTTGACTTACTTGCTCGTTCCGGATGCTTACATGAAGCAGAGGCATTCATCAAGCAAATGGCATTTGAACCTGACGTTCTGGTATGGATGACTCTACTTGCTGCCTGCAGAACCCGTGGGAACGTTGAGATTGGAAAACGGGCAGCAGAGAATGTACTAAAATTAGATCCTTCCCATTCTGCTGCTCTCGTGCTGCTTTGCAACATCCATGCTTCTTCTGGCAATTGGGATGATGTTGCCAGGTTGAGGAACTTGATGAGAGAAAGGGACGTCAGGAAAGTCCCAGGGCAGAGCTGGATTGAGGTTAAGGATAGGGCCCATGTATTTTTTGTTGAAGATTGCCTGCATCCTGAGAGAGGTAAAATATATGCAATGCTAGAGGTGTTGTGGCTGCAGATGCTGGATGATGGTTATGACCCACTTCAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

738

Amino Acids

82.37

Weight (kDa)

6.19

Isoelectric Point (pI)

44.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	130 - 177	1.2e-11	PPR repeat family
PPR	PF01535	133 - 163	2.1e-07	PPR repeat
PPR_2	PF13041	333 - 373	8.9e-10	PPR repeat family
PPR	PF01535	336 - 366	3.7e-07	PPR repeat
PPR_2	PF13041	436 - 484	2e-08	PPR repeat family
E_motif	PF20431	635 - 695	6.2e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014545)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53360 AT3G53360
fragaria_vesca	FvH4_6g15460
malus_domestica	MD04G1103100.v1.1 MD12G1123300.v1.1
prunus_persica	Prupe.6G239900_v2.0.a1
pyrus_communis	pycom04g09820 pycom12g12200
rosa_chinensis	RchiOBHm_Chr3g0468941
rosa_laevigata	RLG00000024398
rosa_multiflora	Rmu_co8434945.1_g000001
rosa_roxburghii	Rroxscaffold_6G00412440
rosa_rugosa	Rorug03G0097700
rosa_samantha	Rh3AG147500 Rh3BG170100 Rh3DG205100
rosa_wichuraiana	Rw3G013870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2055
Acc16I	TGCGCA	1 cut(s)	1579
Acc36I	ACCTGC	1 cut(s)	473
AccB7I	CCANNNNNTGG	1 cut(s)	277
AccI	GTMKAC	1 cut(s)	1550
AccII	CGCG	2 cut(s)	353, 638
AccIII	TCCGGA	1 cut(s)	1802
AciI	CCGC	3 cut(s)	353, 541, 1084
AclI	AACGTT	1 cut(s)	1905
AclWI	GGATC	7 cut(s)	768, 1093, 1168, 1570, 1599, 1612, 1943
AcoI	YGGCCR	3 cut(s)	253, 268, 797
AcsI	RAATTY	3 cut(s)	211, 890, 1381
AcuI	CTGAAG	1 cut(s)	2189
AcyI	GRCGYC	1 cut(s)	2052
AfaI	GTAC	4 cut(s)	425, 635, 1755, 1938
AfiI	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
AflIII	ACRYGT	3 cut(s)	327, 936, 1545
AjnI	CCWGG	3 cut(s)	1010, 2021, 2065
AluBI	AGCT	7 cut(s)	133, 527, 565, 736, 755, 1586, 2076
AluI	AGCT	7 cut(s)	133, 527, 565, 736, 755, 1586, 2076
Alw26I	GTCTC	4 cut(s)	246, 553, 900, 1622
AlwI	GGATC	7 cut(s)	768, 1093, 1168, 1570, 1599, 1612, 1943
AlwNI	CAGNNNCTG	2 cut(s)	593, 2182
Aor13HI	TCCGGA	1 cut(s)	1802
AoxI	GGCC	8 cut(s)	253, 268, 797, 841, 995, 1197, 1356, 2097
ApaI	GGGCCC	1 cut(s)	2101
ApeKI	GCWGC	7 cut(s)	565, 1345, 1883, 1925, 1964, 1975, 2173
ApoI	RAATTY	3 cut(s)	211, 890, 1381
AseI	ATTAAT	1 cut(s)	1538
AspLEI	GCGC	1 cut(s)	1580
AspS9I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
AsuC2I	CCSGG	3 cut(s)	1030, 1355, 1360
AsuHPI	GGTGA	3 cut(s)	496, 593, 1178
AsuII	TTCGAA	1 cut(s)	1037
BaeGI	GKGCMC	1 cut(s)	2101
BalI	TGGCCA	1 cut(s)	270
BamHI	GGATCC	1 cut(s)	1604
BanII	GRGCYC	1 cut(s)	2101
BauI	CACGAG	3 cut(s)	678, 1619, 1970
BbvCI	CCTCAGC	1 cut(s)	476
BbvI	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
BccI	CCATC	5 cut(s)	70, 982, 1592, 1707, 2183
BceAI	ACGGC	1 cut(s)	268
BcgI	CGANNNNNNTGC	2 cut(s)	352, 386
BciT130I	CCWGG	3 cut(s)	1012, 2023, 2067
BclI	TGATCA	2 cut(s)	496, 1411
BcnI	CCSGG	3 cut(s)	1030, 1355, 1360
BcoDI	GTCTC	4 cut(s)	246, 553, 900, 1622
BfaI	CTAG	1 cut(s)	2159
BfmI	CTRYAG	3 cut(s)	606, 1888, 2174
BfuAI	ACCTGC	1 cut(s)	473
BisI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
BlsI	GCNGC	8 cut(s)	567, 1086, 1347, 1885, 1927, 1966, 1977, 2175
Bme1390I	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
BmgT120I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
BmiI	GGNNCC	2 cut(s)	1606, 2099
BmrFI	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
BmsI	GCATC	9 cut(s)	290, 364, 649, 911, 1071, 1258, 1796, 2137, 2169
BpmI	CTGGAG	1 cut(s)	1065
Bpu10I	CCTNAGC	1 cut(s)	476
Bpu14I	TTCGAA	1 cut(s)	1037
BpuMI	CCSGG	3 cut(s)	1030, 1355, 1360
Bsa29I	ATCGAT	1 cut(s)	1565
BsaBI	GATNNNNATC	1 cut(s)	13
BsaHI	GRCGYC	1 cut(s)	2052
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	6 cut(s)	265, 1359, 1731, 1897, 2065, 2066
BsaWI	WCCGGW	1 cut(s)	1802
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
Bse118I	RCCGGY	1 cut(s)	795
Bse1I	ACTGG	3 cut(s)	598, 1668, 1704
Bse3DI	GCAATG	4 cut(s)	384, 1483, 1537, 2160
Bse8I	GATNNNNATC	1 cut(s)	13
BseAI	TCCGGA	1 cut(s)	1802
BseBI	CCWGG	3 cut(s)	1012, 2023, 2067
BseCI	ATCGAT	1 cut(s)	1565
BseDI	CCNNGG	6 cut(s)	265, 1359, 1731, 1897, 2065, 2066
BseJI	GATNNNNATC	1 cut(s)	13
BseLI	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
BseMI	GCAATG	4 cut(s)	384, 1483, 1537, 2160
BseMII	CTCAG	4 cut(s)	443, 467, 1091, 2124
BseNI	ACTGG	3 cut(s)	598, 1668, 1704
BseSI	GKGCMC	1 cut(s)	2101
BseX3I	CGGCCG	2 cut(s)	253, 797
BseXI	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
BseYI	CCCAGC	3 cut(s)	197, 553, 732
Bsh1236I	CGCG	2 cut(s)	353, 638
Bsh1285I	CGRYCG	2 cut(s)	256, 800
BshFI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
BshVI	ATCGAT	1 cut(s)	1565
BsiEI	CGRYCG	2 cut(s)	256, 800
BsiSI	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
BslFI	GGGAC	3 cut(s)	1107, 2048, 2063
BslI	CCNNNNNNNGG	7 cut(s)	277, 860, 1360, 1746, 2028, 2138, 2206
BsmAI	GTCTC	4 cut(s)	246, 553, 900, 1622
BsmFI	GGGAC	3 cut(s)	1107, 2048, 2063
BsmI	GAATGC	5 cut(s)	622, 1021, 1045, 1327, 1826
BsnI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
Bso31I	GGTCTC	1 cut(s)	246
Bsp119I	TTCGAA	1 cut(s)	1037
Bsp120I	GGGCCC	1 cut(s)	2097
Bsp1286I	GDGCHC	1 cut(s)	2101
Bsp13I	TCCGGA	1 cut(s)	1802
Bsp143I	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
Bsp19I	CCATGG	2 cut(s)	265, 1731
BspACI	CCGC	3 cut(s)	353, 541, 1084
BspANI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
BspCNI	CTCAG	4 cut(s)	442, 468, 1090, 2125
BspDI	ATCGAT	1 cut(s)	1565
BspEI	TCCGGA	1 cut(s)	1802
BspFNI	CGCG	2 cut(s)	353, 638
BspHI	TCATGA	1 cut(s)	1054
BspLI	GGNNCC	2 cut(s)	1606, 2099
BspMAI	CTGCAG	2 cut(s)	1892, 2178
BspMI	ACCTGC	1 cut(s)	473
BspPI	GGATC	7 cut(s)	768, 1093, 1168, 1570, 1599, 1612, 1943
BspQI	GCTCTTC	1 cut(s)	1593
BspT104I	TTCGAA	1 cut(s)	1037
BspTNI	GGTCTC	1 cut(s)	246
BsrDI	GCAATG	4 cut(s)	384, 1483, 1537, 2160
BsrFI	RCCGGY	1 cut(s)	795
BsrI	ACTGG	3 cut(s)	598, 1668, 1704
BssAI	RCCGGY	1 cut(s)	795
BssECI	CCNNGG	6 cut(s)	265, 1359, 1731, 1897, 2065, 2066
BssMI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
BssNAI	GTATAC	1 cut(s)	1551
BssNI	GRCGYC	1 cut(s)	2052
BssSI	CACGAG	3 cut(s)	678, 1619, 1970
BssT1I	CCWWGG	2 cut(s)	265, 1731
Bst1107I	GTATAC	1 cut(s)	1551
Bst2BI	CACGAG	3 cut(s)	678, 1619, 1970
Bst2UI	CCWGG	3 cut(s)	1012, 2023, 2067
Bst4CI	ACNGT	7 cut(s)	27, 93, 976, 1213, 1229, 1495, 1525
Bst6I	CTCTTC	1 cut(s)	1593
BstACI	GRCGYC	1 cut(s)	2052
BstAPI	GCANNNNNTGC	1 cut(s)	617
BstBI	TTCGAA	1 cut(s)	1037
BstDEI	CTNAG	5 cut(s)	429, 476, 1077, 1248, 2133
BstDSI	CCRYGG	3 cut(s)	265, 1731, 1897
BstENI	CCTNNNNNAGG	1 cut(s)	2136
BstFNI	CGCG	2 cut(s)	353, 638
BstHHI	GCGC	1 cut(s)	1580
BstKTI	GATC	9 cut(s)	499, 763, 1101, 1176, 1414, 1565, 1569, 1607, 1951
BstMAI	GTCTC	4 cut(s)	246, 553, 900, 1622
BstMBI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
BstMCI	CGRYCG	2 cut(s)	256, 800
BstMWI	GCNNNNNNNGC	4 cut(s)	152, 617, 830, 2179
BstNI	CCWGG	3 cut(s)	1012, 2023, 2067
BstNSI	RCATGY	7 cut(s)	331, 572, 778, 940, 1345, 1446, 1549
BstSCI	CCNGG	6 cut(s)	1010, 1028, 1353, 1358, 2021, 2065
BstSFI	CTRYAG	3 cut(s)	606, 1888, 2174
BstSLI	GKGCMC	1 cut(s)	2101
BstUI	CGCG	2 cut(s)	353, 638
BstV1I	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
BstX2I	RGATCY	3 cut(s)	1173, 1604, 1948
BstYI	RGATCY	3 cut(s)	1173, 1604, 1948
BstZ17I	GTATAC	1 cut(s)	1551
BstZI	CGGCCG	2 cut(s)	253, 797
Bsu15I	ATCGAT	1 cut(s)	1565
BsuRI	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
BsuTUI	ATCGAT	1 cut(s)	1565
BtgI	CCRYGG	3 cut(s)	265, 1731, 1897
BtsIMutI	CAGTG	4 cut(s)	410, 835, 981, 1661
BveI	ACCTGC	1 cut(s)	473
CaiI	CAGNNNCTG	2 cut(s)	593, 2182
CciI	TCATGA	1 cut(s)	1054
CfoI	GCGC	1 cut(s)	1580
Cfr10I	RCCGGY	1 cut(s)	795
Cfr13I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
ClaI	ATCGAT	1 cut(s)	1565
CseI	GACGC	1 cut(s)	1310
Csp6I	GTAC	4 cut(s)	424, 634, 1754, 1937
CspCI	CAANNNNNGTGG	2 cut(s)	9, 44
CviQI	GTAC	4 cut(s)	424, 634, 1754, 1937
DdeI	CTNAG	5 cut(s)	429, 476, 1077, 1248, 2133
DpnI	GATC	9 cut(s)	498, 762, 1100, 1175, 1413, 1564, 1568, 1606, 1950
DpnII	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
EaeI	YGGCCR	3 cut(s)	253, 268, 797
EagI	CGGCCG	2 cut(s)	253, 797
Eam1104I	CTCTTC	1 cut(s)	1593
EarI	CTCTTC	1 cut(s)	1593
EclXI	CGGCCG	2 cut(s)	253, 797
Eco130I	CCWWGG	2 cut(s)	265, 1731
Eco147I	AGGCCT	1 cut(s)	843
Eco24I	GRGCYC	1 cut(s)	2101
Eco31I	GGTCTC	1 cut(s)	246
Eco52I	CGGCCG	2 cut(s)	253, 797
Eco57I	CTGAAG	1 cut(s)	2189
EcoNI	CCTNNNNNAGG	1 cut(s)	2136
EcoO109I	RGGNCCY	2 cut(s)	1197, 2097
EcoRII	CCWGG	3 cut(s)	1010, 2021, 2065
EcoT14I	CCWWGG	2 cut(s)	265, 1731
EcoT22I	ATGCAT	1 cut(s)	1273
EcoT38I	GRGCYC	1 cut(s)	2101
ErhI	CCWWGG	2 cut(s)	265, 1731
FalI	AAGNNNNNCTT	2 cut(s)	1184, 1216
FaqI	GGGAC	3 cut(s)	1107, 2048, 2063
FbaI	TGATCA	2 cut(s)	496, 1411
FblI	GTMKAC	1 cut(s)	1550
Fnu4HI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
FriOI	GRGCYC	1 cut(s)	2101
Fsp4HI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
FspBI	CTAG	1 cut(s)	2159
FspI	TGCGCA	1 cut(s)	1579
GlaI	GCGC	1 cut(s)	1579
GluI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
GsaI	CCCAGC	3 cut(s)	201, 557, 736
GsuI	CTGGAG	1 cut(s)	1065
HaeIII	GGCC	8 cut(s)	255, 270, 799, 843, 997, 1199, 1358, 2099
HapII	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
HgaI	GACGC	1 cut(s)	1310
HhaI	GCGC	1 cut(s)	1580
Hin1I	GRCGYC	1 cut(s)	2052
Hin6I	GCGC	1 cut(s)	1578
HinP1I	GCGC	1 cut(s)	1578
HincII	GTYRAC	4 cut(s)	30, 47, 56, 1786
HindII	GTYRAC	4 cut(s)	30, 47, 56, 1786
HindIII	AAGCTT	3 cut(s)	131, 525, 753
HinfI	GANTC	9 cut(s)	43, 261, 313, 962, 1049, 1474, 1480, 1736, 1873
HpaII	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
HphI	GGTGA	3 cut(s)	496, 593, 1178
Hpy166II	GTNNAC	5 cut(s)	30, 47, 56, 1551, 1786
Hpy8I	GTNNAC	5 cut(s)	30, 47, 56, 1551, 1786
Hpy99I	CGWCG	2 cut(s)	1109, 1762
HpyAV	CCTTC	4 cut(s)	854, 1158, 1703, 1962
HpyCH4III	ACNGT	7 cut(s)	27, 93, 976, 1213, 1229, 1495, 1525
HpyCH4IV	ACGT	3 cut(s)	1857, 1905, 2052
HpyF10VI	GCNNNNNNNGC	4 cut(s)	152, 617, 830, 2179
HpyF3I	CTNAG	5 cut(s)	429, 476, 1077, 1248, 2133
HpySE526I	ACGT	3 cut(s)	1857, 1905, 2052
Hsp92I	GRCGYC	1 cut(s)	2052
HspAI	GCGC	1 cut(s)	1578
Kpn2I	TCCGGA	1 cut(s)	1802
Ksp22I	TGATCA	2 cut(s)	496, 1411
Kzo9I	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
LguI	GCTCTTC	1 cut(s)	1593
LmnI	GCTCC	2 cut(s)	929, 1439
Lsp1109I	GCAGC	7 cut(s)	552, 1357, 1870, 1937, 1951, 1962, 2160
LweI	GCATC	9 cut(s)	290, 364, 649, 911, 1071, 1258, 1796, 2137, 2169
MaeI	CTAG	1 cut(s)	2159
MaeII	ACGT	3 cut(s)	1857, 1905, 2052
MaeIII	GTNAC	4 cut(s)	932, 1312, 1519, 1657
MalI	GATC	9 cut(s)	498, 762, 1100, 1175, 1413, 1564, 1568, 1606, 1950
MboI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
MboII	GAAGA	6 cut(s)	1112, 1298, 1580, 1718, 1989, 2129
MfeI	CAATTG	2 cut(s)	956, 2005
MflI	RGATCY	3 cut(s)	1173, 1604, 1948
MhlI	GDGCHC	1 cut(s)	2101
MlsI	TGGCCA	1 cut(s)	270
MluNI	TGGCCA	1 cut(s)	270
MlyI	GAGTC	2 cut(s)	52, 1867
MmeI	TCCRAC	1 cut(s)	710
Mox20I	TGGCCA	1 cut(s)	270
Mph1103I	ATGCAT	1 cut(s)	1273
MroI	TCCGGA	1 cut(s)	1802
MscI	TGGCCA	1 cut(s)	270
MseI	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
MslI	CAYNNNNRTG	1 cut(s)	573
Msp20I	TGGCCA	1 cut(s)	270
MspA1I	CMGCKG	1 cut(s)	565
MspI	CCGG	7 cut(s)	256, 296, 796, 1029, 1354, 1359, 1803
MspR9I	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
MunI	CAATTG	2 cut(s)	956, 2005
Mva1269I	GAATGC	5 cut(s)	622, 1021, 1045, 1327, 1826
MvaI	CCWGG	3 cut(s)	1012, 2023, 2067
MvnI	CGCG	2 cut(s)	353, 638
MwoI	GCNNNNNNNGC	4 cut(s)	152, 617, 830, 2179
NciI	CCSGG	3 cut(s)	1030, 1355, 1360
NcoI	CCATGG	2 cut(s)	265, 1731
NdeII	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
NlaIV	GGNNCC	2 cut(s)	1606, 2099
NmuCI	GTSAC	1 cut(s)	932
NsbI	TGCGCA	1 cut(s)	1579
NsiI	ATGCAT	1 cut(s)	1273
NspI	RCATGY	7 cut(s)	331, 572, 778, 940, 1345, 1446, 1549
NspV	TTCGAA	1 cut(s)	1037
PaeI	GCATGC	2 cut(s)	572, 1345
PagI	TCATGA	1 cut(s)	1054
PasI	CCCWGGG	1 cut(s)	2066
PceI	AGGCCT	1 cut(s)	843
PciI	ACATGT	3 cut(s)	327, 936, 1545
PciSI	GCTCTTC	1 cut(s)	1593
PctI	GAATGC	5 cut(s)	622, 1021, 1045, 1327, 1826
PfeI	GAWTC	7 cut(s)	261, 313, 962, 1049, 1474, 1480, 1736
PflMI	CCANNNNNTGG	1 cut(s)	277
PfoI	TCCNGGA	1 cut(s)	1010
PkrI	GCNGC	8 cut(s)	567, 1086, 1347, 1885, 1927, 1966, 1977, 2175
PleI	GAGTC	2 cut(s)	51, 1867
PpsI	GAGTC	2 cut(s)	51, 1867
PscI	ACATGT	3 cut(s)	327, 936, 1545
PshBI	ATTAAT	1 cut(s)	1538
Psp1406I	AACGTT	1 cut(s)	1905
Psp6I	CCWGG	3 cut(s)	1010, 2021, 2065
PspFI	CCCAGC	3 cut(s)	197, 553, 732
PspGI	CCWGG	3 cut(s)	1010, 2021, 2065
PspN4I	GGNNCC	2 cut(s)	1606, 2099
PspOMI	GGGCCC	1 cut(s)	2097
PspPI	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
PsrI	GAACNNNNNNTAC	2 cut(s)	626, 658
PstI	CTGCAG	2 cut(s)	1892, 2178
PstNI	CAGNNNCTG	2 cut(s)	593, 2182
PsuI	RGATCY	3 cut(s)	1173, 1604, 1948
PvuII	CAGCTG	1 cut(s)	565
RsaI	GTAC	4 cut(s)	425, 635, 1755, 1938
RsaNI	GTAC	4 cut(s)	424, 634, 1754, 1937
RseI	CAYNNNNRTG	1 cut(s)	573
SapI	GCTCTTC	1 cut(s)	1593
SaqAI	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
SatI	GCNGC	8 cut(s)	566, 1085, 1346, 1884, 1926, 1965, 1976, 2174
Sau3AI	GATC	9 cut(s)	496, 760, 1098, 1173, 1411, 1562, 1566, 1604, 1948
Sau96I	GGNCC	5 cut(s)	996, 1197, 1356, 2097, 2098
SchI	GAGTC	2 cut(s)	52, 1867
ScrFI	CCNGG	6 cut(s)	1012, 1030, 1355, 1360, 2023, 2067
SduI	GDGCHC	1 cut(s)	2101
SfaNI	GCATC	9 cut(s)	290, 364, 649, 911, 1071, 1258, 1796, 2137, 2169
SfcI	CTRYAG	3 cut(s)	606, 1888, 2174
SfuI	TTCGAA	1 cut(s)	1037
SmiMI	CAYNNNNRTG	1 cut(s)	573
SphI	GCATGC	2 cut(s)	572, 1345
SseBI	AGGCCT	1 cut(s)	843
SsiI	CCGC	3 cut(s)	353, 541, 1084
SspI	AATATT	1 cut(s)	192
SspMI	CTAG	1 cut(s)	2159
StuI	AGGCCT	1 cut(s)	843
StyD4I	CCNGG	6 cut(s)	1010, 1028, 1353, 1358, 2021, 2065
StyI	CCWWGG	2 cut(s)	265, 1731
TaaI	ACNGT	7 cut(s)	27, 93, 976, 1213, 1229, 1495, 1525
TaiI	ACGT	3 cut(s)	1860, 1908, 2055
TaqI	TCGA	5 cut(s)	246, 372, 713, 1037, 1565
TaqII	GACCGA	1 cut(s)	635
TatI	WGTACW	1 cut(s)	1936
TauI	GCSGC	1 cut(s)	1087
TfiI	GAWTC	7 cut(s)	261, 313, 962, 1049, 1474, 1480, 1736
Tru1I	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
Tru9I	TTAA	5 cut(s)	11, 582, 1385, 1538, 2088
TscAI	CASTG	4 cut(s)	417, 835, 981, 1668
TseFI	GTSAC	1 cut(s)	932
TseI	GCWGC	7 cut(s)	565, 1345, 1883, 1925, 1964, 1975, 2173
Tsp45I	GTSAC	1 cut(s)	932
TspDTI	ATGAA	8 cut(s)	17, 561, 759, 1071, 1472, 1668, 1819, 1830
TspGWI	ACGGA	1 cut(s)	1646
TspRI	CASTG	4 cut(s)	417, 835, 981, 1668
Van91I	CCANNNNNTGG	1 cut(s)	277
VspI	ATTAAT	1 cut(s)	1538
XagI	CCTNNNNNAGG	1 cut(s)	2136
XapI	RAATTY	3 cut(s)	211, 890, 1381
XceI	RCATGY	7 cut(s)	331, 572, 778, 940, 1345, 1446, 1549
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1997, 2073
XmiI	GTMKAC	1 cut(s)	1550
XspI	CTAG	1 cut(s)	2159
ZraI	GACGTC	1 cut(s)	2053
Zsp2I	ATGCAT	1 cut(s)	1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.