Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0012100

Physical Location & Seq

Genomic Coordinates Forward (+)

17295152 .. 17300629

Gene Structure 5478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCTGTAGAAGAAGTTGCCGACCAGGTAGTTGCGCCGCCGCAGAAGGCGAAGGAGCCTTCCGAAGATGAGAAACGGAGGAAGAAAATAGCGGCCGGAGCTTTGATGAAAGCGGTGATGAGGCCCGGTGGAGGCGATTCAACCCCTTCAGATGGTTATCAGGTTGTATATCATTCCACTGTTAGAACATTGGATGGAGTTGTTGTCGAATCGTCCAGATCGGAATATGGAGGCAAGGGTACTCCAATTCGACATGTTTTGGGAAAGAGCAAGATCATAGTGGGTTTGCTAGAAGGACTTCCAACAATGCTGAAGGGTGAAGTTGCAATGTTCAAAATGAAACCCCAAGTGCACTACAGTGAGGATGATTGCCCTGTTTCAGCACCCAGCGGCTTTCCAAAGGATGACGAACTTCATTTTGAAATTGAGATGATAGATTTCTTTAAAGCCAAGGTCGTTAGTGATGACTTGGGAGTTGTAAAGAAGGTAATAACTGGAGGTCAGGGTTGGGAATCGCCCAGGGAACCTTATGAAGTCAAAGCCTGGATTTCTGCAAAGACAGGTGATGGAAAAGTGCTTGTTTCACGGACTCAAGGAGAGCCATTTTTCTTTAATTTTGGAAAGTCAGAGGTACCTAAAGGTCTTGAGATGGGAATTGGTACAATGACACGGGAAGAGAAGGCAATAATATACGTGACCAGCAATTACTTAACTCCATCTCCTTTCCTGCCTGGGGTAGAAGGTGTTGAGGAAGTTCATTTTGAAGTAGAGCTTGCCCACTTTATTCAGGTGCGTGACATACTTGGTGACGGGCGCCTGATAAAACGTCGTATTCATGATGGAAAAGGTGAGTTTCCTATGGATTGTCCTCTTCATGACAGCCTACTACGTGTCCATTATAAGGGTATGCTTCTTAACGAGGAAAAGACAATCTTCTATGATACAAGAGTTGATAACGATGGTCAGCCTTTGGAGTTTTGTTCTGGAGAAGGCCTTGTGCCCGAGGGATTTGAAATGTGTGTTCGTTTGATGGTGCCTGAAGAGATAGCTCTCGTCACATGCCCTCCTGATTATGCATATGACAAATTTCCTAGGCCTGCTAATGTTCCTGAGGGTGCTCATATTCAATGGGAAATCGAGCTTCTTGGGTTTGAGATGCCAAAGGATTGGACTGGTTTAAATTTTCAAAGCATAATGGATGAAGCAGAGAAGATTAGAAATACGGGAAACAGGCTATTCAAAGAAGGAAAATATGAACTTGCTAAGGCAAAGTATGACAAGGTGCTTAGGGAATTTAATCATGTTAATCCTCAAGATGATGAAGAGGGGAAAATATTTGCAAATACAAGGAATCTGTTACATCTGAATGTTGCCGCATGCTTCCTGAAGATGGGAGAATGCAGAAAATCCATTGAGATATGCAACAAGGTTTTAGAAGCAAACCCTGGACATGTCAAGGCTCTTTACCGCCGAGGTATGGCCTACATGACTCTTGGAGATTTCGAGGAAGCAAAGAGTGACTTCAACACGATGATAAAACTAGACAAGTCAACTGAACCTGATGCTACAGCTGCTCTGCTAAAAGTTAAACAGAAAGAACAGGAAGTTGAGAAGAAGGTGCGGAAACAATTTAAGGGACTATTTGACAAGAAGCCAGGGGAAATTTCAGAGGTTGGAACTGAAGACGTAGATCAGCCTGCAGTTGAGAACCCTAAGAATGATGATAAGGAGGATTCCGACGGAGATAATTCAGACGAATCTCATGAAACTGCAGATGACCCTCCCAGAACATCCTGGTTCTCTTTCCTCTGGCCTAAAAGACTACTTGCAGCCCTAGGGCGGCCAGGATGTACGATTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000038 GO:0000413 GO:0000902 GO:0003006 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006457 GO:0006464 GO:0006629 GO:0006631 GO:0006633 GO:0006807 GO:0007163 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009880 GO:0009987 GO:0010033 GO:0010154 GO:0012505 GO:0016043 GO:0016049 GO:0016053 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0019752 GO:0022414 GO:0022622 GO:0030010 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042761 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0061077 GO:0061458 GO:0071704 GO:0071840 GO:0072330 GO:0090696 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_6 TPR_8

Protein Analysis

621

Amino Acids

69.44

Weight (kDa)

5.28

Isoelectric Point (pI)

43.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	46 - 144	1.1e-14	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	171 - 258	3e-08	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	294 - 382	1.6e-14	FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_1	PF00515	485 - 516	1.2e-06	Tetratricopeptide repeat
TPR_2	PF07719	486 - 516	5.9e-06	Tetratricopeptide repeat
TPR_8	PF13181	486 - 517	9.8e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54010 AT3G54010
fragaria_vesca	FvH4_6g12640 FvH4_6g12640 FvH4_6g12640
malus_domestica	MD04G1140300.v1.1 MD12G1155600.v1.1
prunus_persica	Prupe.6G265400_v2.0.a1
pyrus_communis	pycom04g12790 pycom12g14770
rosa_chinensis	RchiOBHm_Chr3g0464491
rosa_laevigata	RLG00000024692
rosa_multiflora	Rmu_sc0003074.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415620
rosa_rugosa	Rorug03G0072600
rosa_samantha	Rh3BG134800 Rh3CG137300 Rh3DG136100
rosa_wichuraiana	Rw3G011020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	900
Acc65I	GGTACC	1 cut(s)	631
AccB1I	GGYRCC	3 cut(s)	631, 813, 1033
AciI	CCGC	9 cut(s)	38, 41, 92, 113, 390, 1374, 1468, 1621, 1840
AcoI	YGGCCR	2 cut(s)	93, 1841
AcsI	RAATTY	4 cut(s)	1085, 1180, 1292, 1662
AcuI	CTGAAG	5 cut(s)	132, 332, 1059, 1406, 1701
AcyI	GRCGYC	1 cut(s)	814
AfaI	GTAC	4 cut(s)	241, 633, 661, 1852
AfiI	CCNNNNNNNGG	7 cut(s)	131, 152, 733, 901, 1390, 1477, 1839
AflIII	ACRYGT	3 cut(s)	253, 889, 1450
AgsI	TTSAA	9 cut(s)	141, 334, 422, 764, 1013, 1127, 1187, 1240, 1525
AjnI	CCWGG	8 cut(s)	24, 518, 542, 730, 1444, 1654, 1793, 1843
AleI	CACNNNNGTG	1 cut(s)	357
AluBI	AGCT	5 cut(s)	101, 772, 1049, 1141, 1571
AluI	AGCT	5 cut(s)	101, 772, 1049, 1141, 1571
Alw21I	GWGCWC	2 cut(s)	354, 1120
Alw44I	GTGCAC	1 cut(s)	350
Ama87I	CYCGRG	1 cut(s)	1001
AoxI	GGCC	7 cut(s)	93, 122, 991, 1094, 1479, 1811, 1841
ApaLI	GTGCAC	1 cut(s)	350
ApeKI	GCWGC	2 cut(s)	1571, 1829
ApoI	RAATTY	4 cut(s)	1085, 1180, 1292, 1662
Asp700I	GAANNNNTTC	1 cut(s)	297
Asp718I	GGTACC	1 cut(s)	631
AspA2I	CCTAGG	2 cut(s)	1091, 1834
AspLEI	GCGC	2 cut(s)	37, 816
AspS9I	GGNCC	1 cut(s)	123
AsuC2I	CCSGG	1 cut(s)	126
AsuHPI	GGTGA	5 cut(s)	127, 329, 575, 818, 860
AvaI	CYCGRG	1 cut(s)	1001
AvrII	CCTAGG	2 cut(s)	1091, 1834
AxyI	CCTNAGG	1 cut(s)	1110
BaeGI	GKGCMC	2 cut(s)	354, 1002
BaeI	ACNNNNGTAYC	2 cut(s)	933, 966
BanI	GGYRCC	3 cut(s)	631, 813, 1033
BbsI	GAAGAC	1 cut(s)	1689
Bbv12I	GWGCWC	2 cut(s)	354, 1120
BbvI	GCAGC	2 cut(s)	1558, 1841
BccI	CCATC	9 cut(s)	146, 188, 560, 643, 724, 833, 953, 1024, 1384
BciT130I	CCWGG	8 cut(s)	26, 520, 544, 732, 1446, 1656, 1795, 1845
BcnI	CCSGG	1 cut(s)	126
BfaI	CTAG	4 cut(s)	290, 1092, 1541, 1835
BfmI	CTRYAG	5 cut(s)	6, 355, 1566, 1698, 1770
BfoI	RGCGCY	1 cut(s)	817
BisI	GCNGC	8 cut(s)	38, 41, 93, 391, 1374, 1572, 1830, 1841
BlnI	CCTAGG	2 cut(s)	1091, 1834
BlsI	GCNGC	8 cut(s)	39, 42, 94, 392, 1375, 1573, 1831, 1842
Bme1390I	CCNGG	9 cut(s)	26, 126, 520, 544, 732, 1446, 1656, 1795, 1845
BmeT110I	CYCGRG	1 cut(s)	1001
BmgT120I	GGNCC	1 cut(s)	123
BmiI	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
BmrFI	CCNGG	9 cut(s)	26, 126, 520, 544, 732, 1446, 1656, 1795, 1845
BmsI	GCATC	2 cut(s)	1146, 1552
BpiI	GAAGAC	1 cut(s)	1689
BpmI	CTGGAG	2 cut(s)	516, 1005
Bpu10I	CCTNAGC	2 cut(s)	1263, 1286
BpuEI	CTTGAG	3 cut(s)	576, 665, 1296
BpuMI	CCSGG	1 cut(s)	126
BsaAI	YACGTR	2 cut(s)	694, 890
BsaBI	GATNNNNATC	1 cut(s)	156
BsaHI	GRCGYC	1 cut(s)	814
BsaXI	ACNNNNNCTCC	6 cut(s)	189, 219, 703, 733, 1048, 1078
Bsc4I	CCNNNNNNNGG	7 cut(s)	131, 152, 733, 901, 1390, 1477, 1839
Bse1I	ACTGG	2 cut(s)	499, 1177
Bse21I	CCTNAGG	1 cut(s)	1110
Bse3DI	GCAATG	1 cut(s)	333
Bse8I	GATNNNNATC	1 cut(s)	156
BseBI	CCWGG	8 cut(s)	26, 520, 544, 732, 1446, 1656, 1795, 1845
BseGI	GGATG	6 cut(s)	199, 370, 409, 1204, 1790, 1853
BseJI	GATNNNNATC	1 cut(s)	156
BseLI	CCNNNNNNNGG	7 cut(s)	131, 152, 733, 901, 1390, 1477, 1839
BseMI	GCAATG	1 cut(s)	333
BseMII	CTCAG	1 cut(s)	1101
BseNI	ACTGG	2 cut(s)	499, 1177
BseSI	GKGCMC	2 cut(s)	354, 1002
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	2 cut(s)	1558, 1841
BseYI	CCCAGC	1 cut(s)	386
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BshNI	GGYRCC	3 cut(s)	631, 813, 1033
BsiEI	CGRYCG	1 cut(s)	96
BsiHKAI	GWGCWC	2 cut(s)	354, 1120
BsiHKCI	CYCGRG	1 cut(s)	1001
BsiSI	CCGG	2 cut(s)	96, 126
BslFI	GGGAC	1 cut(s)	1650
BslI	CCNNNNNNNGG	7 cut(s)	131, 152, 733, 901, 1390, 1477, 1839
BsmFI	GGGAC	1 cut(s)	1650
BsmI	GAATGC	1 cut(s)	1403
BsnI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BsoBI	CYCGRG	1 cut(s)	1001
Bsp1286I	GDGCHC	3 cut(s)	354, 1002, 1120
Bsp143I	GATC	3 cut(s)	218, 273, 1690
BspACI	CCGC	9 cut(s)	38, 41, 92, 113, 390, 1374, 1468, 1621, 1840
BspANI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BspCNI	CTCAG	1 cut(s)	1102
BspHI	TCATGA	3 cut(s)	835, 874, 1762
BspLI	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
BspMAI	CTGCAG	2 cut(s)	1702, 1774
BspT107I	GGYRCC	3 cut(s)	631, 813, 1033
BsrDI	GCAATG	1 cut(s)	333
BsrI	ACTGG	2 cut(s)	499, 1177
BssMI	GATC	3 cut(s)	218, 273, 1690
BssNI	GRCGYC	1 cut(s)	814
BssT1I	CCWWGG	3 cut(s)	450, 1091, 1834
Bst2UI	CCWGG	8 cut(s)	26, 520, 544, 732, 1446, 1656, 1795, 1845
Bst4CI	ACNGT	2 cut(s)	181, 359
Bst6I	CTCTTC	4 cut(s)	669, 876, 1035, 1317
BstACI	GRCGYC	1 cut(s)	814
BstBAI	YACGTR	2 cut(s)	694, 890
BstC8I	GCNNGC	4 cut(s)	774, 1098, 1378, 1698
BstDEI	CTNAG	4 cut(s)	1110, 1263, 1286, 1713
BstF5I	GGATG	6 cut(s)	199, 370, 409, 1204, 1790, 1853
BstH2I	RGCGCY	1 cut(s)	817
BstHHI	GCGC	2 cut(s)	37, 816
BstKTI	GATC	3 cut(s)	221, 276, 1693
BstMBI	GATC	3 cut(s)	218, 273, 1690
BstMCI	CGRYCG	1 cut(s)	96
BstMWI	GCNNNNNNNGC	2 cut(s)	98, 1571
BstNI	CCWGG	8 cut(s)	26, 520, 544, 732, 1446, 1656, 1795, 1845
BstNSI	RCATGY	4 cut(s)	257, 1062, 1380, 1454
BstSCI	CCNGG	9 cut(s)	24, 124, 518, 542, 730, 1444, 1654, 1793, 1843
BstSFI	CTRYAG	5 cut(s)	6, 355, 1566, 1698, 1770
BstSLI	GKGCMC	2 cut(s)	354, 1002
BstV1I	GCAGC	2 cut(s)	1558, 1841
BstV2I	GAAGAC	1 cut(s)	1689
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstZI	CGGCCG	1 cut(s)	93
Bsu36I	CCTNAGG	1 cut(s)	1110
BsuRI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BtsCI	GGATG	6 cut(s)	199, 370, 409, 1204, 1790, 1853
BtsIMutI	CAGTG	2 cut(s)	177, 364
Cac8I	GCNNGC	4 cut(s)	774, 1098, 1378, 1698
CciI	TCATGA	3 cut(s)	835, 874, 1762
CfoI	GCGC	2 cut(s)	37, 816
Cfr13I	GGNCC	1 cut(s)	123
CsiI	ACCWGGT	1 cut(s)	24
Csp6I	GTAC	4 cut(s)	240, 632, 660, 1851
CviAII	CATG	9 cut(s)	254, 836, 875, 1059, 1301, 1377, 1451, 1486, 1763
CviQI	GTAC	4 cut(s)	240, 632, 660, 1851
DdeI	CTNAG	4 cut(s)	1110, 1263, 1286, 1713
DinI	GGCGCC	1 cut(s)	815
DpnI	GATC	3 cut(s)	220, 275, 1692
DpnII	GATC	3 cut(s)	218, 273, 1690
DraI	TTTAAA	2 cut(s)	445, 1179
EaeI	YGGCCR	2 cut(s)	93, 1841
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	4 cut(s)	669, 876, 1035, 1317
EarI	CTCTTC	4 cut(s)	669, 876, 1035, 1317
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	3 cut(s)	450, 1091, 1834
Eco147I	AGGCCT	2 cut(s)	993, 1096
Eco52I	CGGCCG	1 cut(s)	93
Eco57I	CTGAAG	5 cut(s)	132, 332, 1059, 1406, 1701
Eco81I	CCTNAGG	1 cut(s)	1110
Eco88I	CYCGRG	1 cut(s)	1001
EcoRII	CCWGG	8 cut(s)	24, 518, 542, 730, 1444, 1654, 1793, 1843
EcoT14I	CCWWGG	3 cut(s)	450, 1091, 1834
EcoT22I	ATGCAT	1 cut(s)	1078
EgeI	GGCGCC	1 cut(s)	815
EheI	GGCGCC	1 cut(s)	815
ErhI	CCWWGG	3 cut(s)	450, 1091, 1834
FaeI	CATG	9 cut(s)	257, 839, 878, 1062, 1304, 1380, 1454, 1489, 1766
FalI	AAGNNNNNCTT	6 cut(s)	756, 788, 917, 949, 1505, 1537
FaqI	GGGAC	1 cut(s)	1650
FatI	CATG	9 cut(s)	253, 835, 874, 1058, 1300, 1376, 1450, 1485, 1762
FauNDI	CATATG	1 cut(s)	1078
Fnu4HI	GCNGC	8 cut(s)	38, 41, 93, 391, 1374, 1572, 1830, 1841
FokI	GGATG	5 cut(s)	206, 377, 416, 1211, 1777
Fsp4HI	GCNGC	8 cut(s)	38, 41, 93, 391, 1374, 1572, 1830, 1841
FspBI	CTAG	4 cut(s)	290, 1092, 1541, 1835
GlaI	GCGC	2 cut(s)	36, 815
GluI	GCNGC	8 cut(s)	38, 41, 93, 391, 1374, 1572, 1830, 1841
GsaI	CCCAGC	1 cut(s)	390
GsuI	CTGGAG	2 cut(s)	516, 1005
HaeII	RGCGCY	1 cut(s)	817
HaeIII	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
HapII	CCGG	2 cut(s)	96, 126
HhaI	GCGC	2 cut(s)	37, 816
Hin1I	GRCGYC	1 cut(s)	814
Hin1II	CATG	9 cut(s)	257, 839, 878, 1062, 1304, 1380, 1454, 1489, 1766
Hin6I	GCGC	2 cut(s)	35, 814
HinP1I	GCGC	2 cut(s)	35, 814
HincII	GTYRAC	1 cut(s)	1551
HindII	GTYRAC	1 cut(s)	1551
HinfI	GANTC	8 cut(s)	137, 209, 512, 589, 1351, 1489, 1733, 1757
HpaII	CCGG	2 cut(s)	96, 126
HphI	GGTGA	5 cut(s)	127, 329, 575, 818, 860
Hpy166II	GTNNAC	2 cut(s)	352, 1551
Hpy188I	TCNGA	8 cut(s)	64, 151, 223, 628, 1365, 1669, 1738, 1753
Hpy8I	GTNNAC	2 cut(s)	352, 1551
Hpy99I	CGWCG	2 cut(s)	831, 1742
HpyCH4III	ACNGT	2 cut(s)	181, 359
HpyCH4IV	ACGT	4 cut(s)	693, 826, 889, 1686
HpyF10VI	GCNNNNNNNGC	2 cut(s)	98, 1571
HpyF3I	CTNAG	4 cut(s)	1110, 1263, 1286, 1713
HpySE526I	ACGT	4 cut(s)	693, 826, 889, 1686
Hsp92I	GRCGYC	1 cut(s)	814
Hsp92II	CATG	9 cut(s)	257, 839, 878, 1062, 1304, 1380, 1454, 1489, 1766
HspAI	GCGC	2 cut(s)	35, 814
KasI	GGCGCC	1 cut(s)	813
KpnI	GGTACC	1 cut(s)	635
Kzo9I	GATC	3 cut(s)	218, 273, 1690
LmnI	GCTCC	2 cut(s)	55, 98
Lsp1109I	GCAGC	2 cut(s)	1558, 1841
LweI	GCATC	2 cut(s)	1146, 1552
MabI	ACCWGGT	1 cut(s)	24
MaeI	CTAG	4 cut(s)	290, 1092, 1541, 1835
MaeII	ACGT	4 cut(s)	693, 826, 889, 1686
MaeIII	GTNAC	6 cut(s)	694, 794, 806, 1054, 1356, 1517
MalI	GATC	3 cut(s)	220, 275, 1692
MboI	GATC	3 cut(s)	218, 273, 1690
MhlI	GDGCHC	3 cut(s)	354, 1002, 1120
Mly113I	GGCGCC	1 cut(s)	814
MlyI	GAGTC	2 cut(s)	583, 1483
MmeI	TCCRAC	3 cut(s)	326, 1654, 1761
Mph1103I	ATGCAT	1 cut(s)	1078
MroXI	GAANNNNTTC	1 cut(s)	297
MseI	TTAA	9 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587, 1632
MslI	CAYNNNNRTG	2 cut(s)	357, 1365
MspA1I	CMGCKG	2 cut(s)	390, 1571
MspI	CCGG	2 cut(s)	96, 126
MspR9I	CCNGG	9 cut(s)	26, 126, 520, 544, 732, 1446, 1656, 1795, 1845
Mva1269I	GAATGC	1 cut(s)	1403
MvaI	CCWGG	8 cut(s)	26, 520, 544, 732, 1446, 1656, 1795, 1845
MwoI	GCNNNNNNNGC	2 cut(s)	98, 1571
NarI	GGCGCC	1 cut(s)	814
NciI	CCSGG	1 cut(s)	126
NdeI	CATATG	1 cut(s)	1078
NdeII	GATC	3 cut(s)	218, 273, 1690
NlaIII	CATG	9 cut(s)	257, 839, 878, 1062, 1304, 1380, 1454, 1489, 1766
NlaIV	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
NmeAIII	GCCGAG	1 cut(s)	1496
NmuCI	GTSAC	5 cut(s)	694, 794, 806, 1054, 1517
NsiI	ATGCAT	1 cut(s)	1078
NspI	RCATGY	4 cut(s)	257, 1062, 1380, 1454
OliI	CACNNNNGTG	1 cut(s)	357
PaeI	GCATGC	1 cut(s)	1380
PagI	TCATGA	3 cut(s)	835, 874, 1762
PasI	CCCWGGG	1 cut(s)	519
PceI	AGGCCT	2 cut(s)	993, 1096
PciI	ACATGT	2 cut(s)	253, 1450
PctI	GAATGC	1 cut(s)	1403
PdmI	GAANNNNTTC	1 cut(s)	297
PfeI	GAWTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
PkrI	GCNGC	8 cut(s)	39, 42, 94, 392, 1375, 1573, 1831, 1842
PleI	GAGTC	2 cut(s)	583, 1483
PluTI	GGCGCC	1 cut(s)	817
PpsI	GAGTC	2 cut(s)	583, 1483
Ppu21I	YACGTR	2 cut(s)	694, 890
PscI	ACATGT	2 cut(s)	253, 1450
PsiI	TTATAA	1 cut(s)	900
Psp6I	CCWGG	8 cut(s)	24, 518, 542, 730, 1444, 1654, 1793, 1843
PspFI	CCCAGC	1 cut(s)	386
PspGI	CCWGG	8 cut(s)	24, 518, 542, 730, 1444, 1654, 1793, 1843
PspN4I	GGNNCC	5 cut(s)	57, 525, 633, 815, 1035
PspPI	GGNCC	1 cut(s)	123
PstI	CTGCAG	2 cut(s)	1702, 1774
PvuII	CAGCTG	1 cut(s)	1571
RsaI	GTAC	4 cut(s)	241, 633, 661, 1852
RsaNI	GTAC	4 cut(s)	240, 632, 660, 1851
RseI	CAYNNNNRTG	2 cut(s)	357, 1365
SaqAI	TTAA	9 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587, 1632
SatI	GCNGC	8 cut(s)	38, 41, 93, 391, 1374, 1572, 1830, 1841
Sau3AI	GATC	3 cut(s)	218, 273, 1690
Sau96I	GGNCC	1 cut(s)	123
SchI	GAGTC	2 cut(s)	583, 1483
ScrFI	CCNGG	9 cut(s)	26, 126, 520, 544, 732, 1446, 1656, 1795, 1845
SduI	GDGCHC	3 cut(s)	354, 1002, 1120
SexAI	ACCWGGT	1 cut(s)	24
SfaNI	GCATC	2 cut(s)	1146, 1552
SfcI	CTRYAG	5 cut(s)	6, 355, 1566, 1698, 1770
SfoI	GGCGCC	1 cut(s)	815
SmiMI	CAYNNNNRTG	2 cut(s)	357, 1365
SmlI	CTYRAG	3 cut(s)	591, 644, 1311
SmoI	CTYRAG	3 cut(s)	591, 644, 1311
SphI	GCATGC	1 cut(s)	1380
SseBI	AGGCCT	2 cut(s)	993, 1096
SsiI	CCGC	9 cut(s)	38, 41, 92, 113, 390, 1374, 1468, 1621, 1840
SspDI	GGCGCC	1 cut(s)	813
SspI	AATATT	1 cut(s)	1335
SspMI	CTAG	4 cut(s)	290, 1092, 1541, 1835
StuI	AGGCCT	2 cut(s)	993, 1096
StyD4I	CCNGG	9 cut(s)	24, 124, 518, 542, 730, 1444, 1654, 1793, 1843
StyI	CCWWGG	3 cut(s)	450, 1091, 1834
TaaI	ACNGT	2 cut(s)	181, 359
TaiI	ACGT	4 cut(s)	696, 829, 892, 1689
TaqI	TCGA	4 cut(s)	207, 250, 1137, 1503
TauI	GCSGC	6 cut(s)	40, 43, 95, 393, 1376, 1843
TfiI	GAWTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
Tru1I	TTAA	9 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587, 1632
Tru9I	TTAA	9 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587, 1632
TscAI	CASTG	2 cut(s)	184, 364
TseFI	GTSAC	5 cut(s)	694, 794, 806, 1054, 1517
TseI	GCWGC	2 cut(s)	1571, 1829
Tsp45I	GTSAC	5 cut(s)	694, 794, 806, 1054, 1517
TspGWI	ACGGA	3 cut(s)	91, 601, 1755
TspRI	CASTG	2 cut(s)	184, 364
VneI	GTGCAC	1 cut(s)	350
XapI	RAATTY	4 cut(s)	1085, 1180, 1292, 1662
XceI	RCATGY	4 cut(s)	257, 1062, 1380, 1454
XmaJI	CCTAGG	2 cut(s)	1091, 1834
XmnI	GAANNNNTTC	1 cut(s)	297
XspI	CTAG	4 cut(s)	290, 1092, 1541, 1835
Zsp2I	ATGCAT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.