Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0012487

Physical Location & Seq

Genomic Coordinates Reverse (-)

17667446 .. 17671122

Gene Structure 3677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGTGACCTCCTTTCCTGCTTCTCTCTGTCTAAATCCCTCTCTCTCTCGTCCTCCCTTTTCTGCAACCAATACCCAACTATCCTTCTCCTCGCCCTTTCCTCCTCTCAGATTCCCAGCCTGCAGATCCTCACGAACAAAACCCAGTAGCCTTTGCGGTAAAGGTGTTCGATTGTGTTGCTCTGAGAGACCAAAAAGTAGAAAACTTGAGCTTAAAGCCAGCGACATGACTATTACAGAGGTCGGGCAAGAGGAAAAGGAAGAGGAAGAGGGTCCTCCTCCATATGCTGAGTCGGAGATTAACTCGAGACCTCGTCGCATTGCTCTCTTCGTCGAGCCTTCTCCCTTTGCATATGTGTCAGGTTATAAAAATCGGTTCCAGAATTTCATTCGATACTTGCGTGAAATGGGGGATGAGGTGATGGTTGTGACAACCCATGAAGGAGTTCCTGACGAATTTTATGGAGCAAAGTTGATTGGATCCCGAAGTTTTCCCTGCCCCTGGTATCAAAAGGTGCCCCTTTCCCTTGCACTTAGTCCTAGAATAATTTCGGAGGTTGCTCAGTTCAAGCCTGACATTATACATGCATCCTCGCCTGGAATTATGGTTTTTGGCGCCCTCATTATCGCTAAGTTGTTATGTGTCCCTATAGTGATGTCGTATCACACTCATGTGCCAGTATATATCCCGAGATACACCTTCAGTTGGCTGGTGAAACCCATGTGGTTGGTCATAAAGTTTCTGCACAGAGCTGCTGATCTCACACTAGTGCCATCAGCTGCAATCAGTAAGATCGATCTCCTAGAAGCTGGGGTGGCCGCAGCTAATACAATCCGTCTTTGGAATAAGGGTGTTGATTCGGAAAGCTTCCATCCCCGCTTCCGTTCTCATGAAATGCGTATAAGACTAAGCAATGGTGAACCTGAGAAACCTTTAATTGTTCATGTTGGAAGACTTGGAGTGGAGAAGAGTCTGGATTTTCTGAAAAGTGTCATGGATCGGCTTCCCGAAGCACGAATTGCTTTCATTGGAGATGGACCATACAGGGAGGATCTGGAAAAACTGTTTGATGGCATGCCTGCAGTATTTACAGGAATGTTAGGAGGTGAAGAGCTCTCGCAGGCATATGCCAGTGGCGACGTTTTTGTGATGCCTTCAGAATCAGAGACACTTGGGCTTGTTGTATTGGAGGCTATGTCTTCAGGTATCCCTGTGGTGGGAGCTCGAGCTGGTGGAATCCCAGATATAATTCCCACAGATCAGGAGGGGAAAACTGGCTTTCTCTACGATTATAATGACCTTGATGACTGCTTAAGTAAGTTGCAGCCCCTGCTGGAGAACAAGGACTTAAGGGAAACAATTGGCAAGGCAGCACGTGAGGAAATGGAGAAATACGATTGGAAAGCAGCCACGCGAGTAATTCGAAATGAGCAATACAATGCTGCCATTTGGTTCTGGAGGAAGAAGAGAGCGCAATTTCTTAGACCTCTGCAGTGGTTCATGAAGCGCATTTTTCCTCCAACCACATCAGCAATCAAGTACAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006790 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008610 GO:0009058 GO:0009247 GO:0009267 GO:0009507 GO:0009526 GO:0009536 GO:0009605 GO:0009941 GO:0009987 GO:0009991 GO:0016036 GO:0016740 GO:0016757 GO:0016758 GO:0031667 GO:0031668 GO:0031669 GO:0031967 GO:0031975 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046505 GO:0046506 GO:0050896 GO:0051716 GO:0070085 GO:0071496 GO:0071704 GO:0097502 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_trans_1_4 Glyco_transf_4 Glycos_transf_1

Protein Analysis

516

Amino Acids

57.97

Weight (kDa)

8.72

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_4	PF13439	121 - 288	1.2e-24	Glycosyltransferase Family 4
Glyco_trans_4_4	PF13579	121 - 262	2.9e-14	Glycosyl transferase 4-like domain
Glycos_transf_1	PF00534	307 - 460	3.9e-27	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	311 - 447	5.8e-26	Glycosyl transferases group 1
Glyco_trans_1_2	PF13524	327 - 467	8.7e-10	Glycosyl transferase-like
GT4-conflict	PF20706	370 - 472	7.3e-08	Family 4 Glycosyltransferase in conflict systems

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01220 AT5G01220
fragaria_vesca	FvH4_6g11930
malus_domestica	MD04G1148000.v1.1 MD12G1161400.v1.1
prunus_persica	Prupe.6G271800_v2.0.a1
pyrus_communis	pycom04g13380 pycom12g15320
rosa_chinensis	RchiOBHm_Chr3g0463701
rosa_laevigata	RLG00000024763
rosa_multiflora	Rmu_sc0003267.1_g000033
rosa_roxburghii	Rroxscaffold_6G00416360
rosa_rugosa	Rorug03G0067000 Rorug03G0067100
rosa_samantha	Rh3AG124100 Rh3BG128700 Rh3CG130900 Rh3DG129300
rosa_wichuraiana	Rw3G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	366, 1293
AccB1I	GGYRCC	2 cut(s)	514, 614
AccII	CGCG	1 cut(s)	1414
AciI	CCGC	3 cut(s)	156, 819, 877
AclWI	GGATC	5 cut(s)	120, 474, 487, 1005, 1059
AcoI	YGGCCR	1 cut(s)	816
AcsI	RAATTY	2 cut(s)	382, 455
AcuI	CTGAAG	3 cut(s)	685, 1140, 1185
AcvI	CACGTG	1 cut(s)	1376
AcyI	GRCGYC	1 cut(s)	615
AfaI	GTAC	1 cut(s)	1541
AfiI	CCNNNNNNNGG	4 cut(s)	501, 705, 1216, 1217
AflII	CTTAAG	2 cut(s)	1312, 1348
AgsI	TTSAA	1 cut(s)	568
AhlI	ACTAGT	1 cut(s)	766
AjnI	CCWGG	2 cut(s)	500, 595
AleI	CACNNNNGTG	2 cut(s)	671, 767
AluBI	AGCT	9 cut(s)	211, 752, 779, 809, 824, 867, 1114, 1223, 1229
AluI	AGCT	9 cut(s)	211, 752, 779, 809, 824, 867, 1114, 1223, 1229
Alw21I	GWGCWC	2 cut(s)	1116, 1225
Alw26I	GTCTC	3 cut(s)	181, 301, 1160
AlwI	GGATC	5 cut(s)	120, 474, 487, 1005, 1059
AlwNI	CAGNNNCTG	1 cut(s)	1330
Ama87I	CYCGRG	3 cut(s)	304, 688, 1224
AoxI	GGCC	1 cut(s)	816
ApeKI	GCWGC	7 cut(s)	752, 779, 821, 1324, 1370, 1406, 1442
ApoI	RAATTY	2 cut(s)	382, 455
Asp700I	GAANNNNTTC	2 cut(s)	444, 547
AspLEI	GCGC	3 cut(s)	617, 1474, 1509
AspS9I	GGNCC	2 cut(s)	272, 1037
AsuHPI	GGTGA	5 cut(s)	16, 430, 724, 929, 1118
AsuII	TTCGAA	1 cut(s)	1423
AvaI	CYCGRG	3 cut(s)	304, 688, 1224
AvaII	GGWCC	2 cut(s)	272, 1037
BaeGI	GKGCMC	1 cut(s)	519
BaeI	ACNNNNGTAYC	2 cut(s)	385, 418
BamHI	GGATCC	1 cut(s)	479
BanI	GGYRCC	2 cut(s)	514, 614
BanII	GRGCYC	2 cut(s)	1116, 1225
BbrPI	CACGTG	1 cut(s)	1376
BbsI	GAAGAC	2 cut(s)	958, 1191
Bbv12I	GWGCWC	2 cut(s)	1116, 1225
BbvI	GCAGC	7 cut(s)	739, 766, 833, 1336, 1382, 1418, 1429
BccI	CCATC	5 cut(s)	415, 781, 879, 1028, 1064
BcgI	CGANNNNNNTGC	2 cut(s)	159, 193
BciT130I	CCWGG	2 cut(s)	502, 597
BciVI	GTATCC	1 cut(s)	1217
BcoDI	GTCTC	3 cut(s)	181, 301, 1160
BcuI	ACTAGT	1 cut(s)	766
BfaI	CTAG	3 cut(s)	540, 767, 803
BfmI	CTRYAG	4 cut(s)	121, 648, 1080, 1490
BfoI	RGCGCY	1 cut(s)	618
BfrI	CTTAAG	2 cut(s)	1312, 1348
BfuI	GTATCC	1 cut(s)	1217
BisI	GCNGC	8 cut(s)	753, 780, 819, 822, 1325, 1371, 1407, 1443
BlsI	GCNGC	8 cut(s)	754, 781, 820, 823, 1326, 1372, 1408, 1444
Bme1390I	CCNGG	2 cut(s)	502, 597
Bme18I	GGWCC	2 cut(s)	272, 1037
BmeT110I	CYCGRG	3 cut(s)	304, 688, 1224
BmgT120I	GGNCC	2 cut(s)	272, 1037
BmiI	GGNNCC	5 cut(s)	273, 377, 481, 516, 616
BmrFI	CCNGG	2 cut(s)	502, 597
BmrI	ACTGGG	1 cut(s)	138
BmsI	GCATC	2 cut(s)	596, 1140
BmuI	ACTGGG	1 cut(s)	138
BpiI	GAAGAC	2 cut(s)	958, 1191
BplI	GAGNNNNNCTC	2 cut(s)	287, 319
BpmI	CTGGAG	2 cut(s)	1355, 1477
Bpu14I	TTCGAA	1 cut(s)	1423
BpuEI	CTTGAG	1 cut(s)	227
Bsa29I	ATCGAT	1 cut(s)	795
BsaAI	YACGTR	1 cut(s)	1376
BsaHI	GRCGYC	1 cut(s)	615
BsaI	GGTCTC	2 cut(s)	181, 301
BsaJI	CCNNGG	1 cut(s)	500
BsaXI	ACNNNNNCTCC	2 cut(s)	1181, 1211
Bsc4I	CCNNNNNNNGG	4 cut(s)	501, 705, 1216, 1217
Bse1I	ACTGG	4 cut(s)	144, 677, 1131, 1279
Bse3DI	GCAATG	2 cut(s)	318, 919
BseBI	CCWGG	2 cut(s)	502, 597
BseCI	ATCGAT	1 cut(s)	795
BseDI	CCNNGG	1 cut(s)	500
BseGI	GGATG	3 cut(s)	418, 587, 871
BseLI	CCNNNNNNNGG	4 cut(s)	501, 705, 1216, 1217
BseMI	GCAATG	2 cut(s)	318, 919
BseMII	CTCAG	5 cut(s)	121, 174, 279, 575, 915
BseNI	ACTGG	4 cut(s)	144, 677, 1131, 1279
BseRI	GAGGAG	3 cut(s)	79, 93, 267
BseSI	GKGCMC	1 cut(s)	519
BseXI	GCAGC	7 cut(s)	739, 766, 833, 1336, 1382, 1418, 1429
BseYI	CCCAGC	2 cut(s)	115, 809
BsgI	GTGCAG	1 cut(s)	728
Bsh1236I	CGCG	1 cut(s)	1414
BshFI	GGCC	1 cut(s)	818
BshNI	GGYRCC	2 cut(s)	514, 614
BshVI	ATCGAT	1 cut(s)	795
BsiHKAI	GWGCWC	2 cut(s)	1116, 1225
BsiHKCI	CYCGRG	3 cut(s)	304, 688, 1224
BslFI	GGGAC	1 cut(s)	629
BslI	CCNNNNNNNGG	4 cut(s)	501, 705, 1216, 1217
BsmAI	GTCTC	3 cut(s)	181, 301, 1160
BsmFI	GGGAC	1 cut(s)	629
BsnI	GGCC	1 cut(s)	818
Bso31I	GGTCTC	2 cut(s)	181, 301
BsoBI	CYCGRG	3 cut(s)	304, 688, 1224
Bsp119I	TTCGAA	1 cut(s)	1423
Bsp1286I	GDGCHC	3 cut(s)	519, 1116, 1225
Bsp143I	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
BspACI	CCGC	3 cut(s)	156, 819, 877
BspANI	GGCC	1 cut(s)	818
BspCNI	CTCAG	5 cut(s)	120, 175, 280, 574, 916
BspDI	ATCGAT	1 cut(s)	795
BspFNI	CGCG	1 cut(s)	1414
BspHI	TCATGA	2 cut(s)	889, 1500
BspLI	GGNNCC	5 cut(s)	273, 377, 481, 516, 616
BspMAI	CTGCAG	3 cut(s)	125, 1084, 1494
BspPI	GGATC	5 cut(s)	120, 474, 487, 1005, 1059
BspQI	GCTCTTC	1 cut(s)	1104
BspT104I	TTCGAA	1 cut(s)	1423
BspT107I	GGYRCC	2 cut(s)	514, 614
BspTI	CTTAAG	2 cut(s)	1312, 1348
BspTNI	GGTCTC	2 cut(s)	181, 301
BsrDI	GCAATG	2 cut(s)	318, 919
BsrI	ACTGG	4 cut(s)	144, 677, 1131, 1279
BssECI	CCNNGG	1 cut(s)	500
BssMI	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
BssNI	GRCGYC	1 cut(s)	615
Bst2UI	CCWGG	2 cut(s)	502, 597
Bst4CI	ACNGT	1 cut(s)	1065
Bst6I	CTCTTC	6 cut(s)	255, 261, 332, 962, 1104, 1460
BstACI	GRCGYC	1 cut(s)	615
BstAFI	CTTAAG	2 cut(s)	1312, 1348
BstAPI	GCANNNNNTGC	2 cut(s)	1019, 1330
BstBAI	YACGTR	1 cut(s)	1376
BstBI	TTCGAA	1 cut(s)	1423
BstC8I	GCNNGC	5 cut(s)	121, 220, 1076, 1080, 1122
BstDEI	CTNAG	9 cut(s)	107, 183, 288, 533, 561, 630, 908, 924, 1481
BstEII	GGTNACC	1 cut(s)	4
BstF5I	GGATG	3 cut(s)	418, 587, 871
BstFNI	CGCG	1 cut(s)	1414
BstH2I	RGCGCY	1 cut(s)	618
BstHHI	GCGC	3 cut(s)	617, 1474, 1509
BstKTI	GATC	8 cut(s)	128, 482, 760, 795, 799, 1000, 1054, 1261
BstMAI	GTCTC	3 cut(s)	181, 301, 1160
BstMBI	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
BstMWI	GCNNNNNNNGC	3 cut(s)	815, 1019, 1330
BstNI	CCWGG	2 cut(s)	502, 597
BstNSI	RCATGY	2 cut(s)	587, 1078
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	2 cut(s)	500, 595
BstSFI	CTRYAG	4 cut(s)	121, 648, 1080, 1490
BstSLI	GKGCMC	1 cut(s)	519
BstUI	CGCG	1 cut(s)	1414
BstV1I	GCAGC	7 cut(s)	739, 766, 833, 1336, 1382, 1418, 1429
BstV2I	GAAGAC	2 cut(s)	958, 1191
BstX2I	RGATCY	3 cut(s)	125, 479, 1051
BstXI	CCANNNNNNTGG	1 cut(s)	727
BstYI	RGATCY	3 cut(s)	125, 479, 1051
Bsu15I	ATCGAT	1 cut(s)	795
BsuI	GTATCC	1 cut(s)	1217
BsuRI	GGCC	1 cut(s)	818
BsuTUI	ATCGAT	1 cut(s)	795
BtsCI	GGATG	3 cut(s)	418, 587, 871
BtsI	GCAGTG	1 cut(s)	1499
BtsIMutI	CAGTG	2 cut(s)	1138, 1499
Cac8I	GCNNGC	5 cut(s)	121, 220, 1076, 1080, 1122
CaiI	CAGNNNCTG	1 cut(s)	1330
CciI	TCATGA	2 cut(s)	889, 1500
CfoI	GCGC	3 cut(s)	617, 1474, 1509
Cfr13I	GGNCC	2 cut(s)	272, 1037
ClaI	ATCGAT	1 cut(s)	795
Csp6I	GTAC	1 cut(s)	1540
CviQI	GTAC	1 cut(s)	1540
DdeI	CTNAG	9 cut(s)	107, 183, 288, 533, 561, 630, 908, 924, 1481
DinI	GGCGCC	1 cut(s)	616
DpnI	GATC	8 cut(s)	127, 481, 759, 794, 798, 999, 1053, 1260
DpnII	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
EaeI	YGGCCR	1 cut(s)	816
Eam1104I	CTCTTC	6 cut(s)	255, 261, 332, 962, 1104, 1460
EarI	CTCTTC	6 cut(s)	255, 261, 332, 962, 1104, 1460
Ecl136II	GAGCTC	2 cut(s)	1114, 1223
Eco24I	GRGCYC	2 cut(s)	1116, 1225
Eco31I	GGTCTC	2 cut(s)	181, 301
Eco47I	GGWCC	2 cut(s)	272, 1037
Eco53kI	GAGCTC	2 cut(s)	1114, 1223
Eco57I	CTGAAG	3 cut(s)	685, 1140, 1185
Eco72I	CACGTG	1 cut(s)	1376
Eco88I	CYCGRG	3 cut(s)	304, 688, 1224
Eco91I	GGTNACC	1 cut(s)	4
EcoICRI	GAGCTC	2 cut(s)	1114, 1223
EcoO109I	RGGNCCY	1 cut(s)	272
EcoO65I	GGTNACC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	500, 595
EcoT22I	ATGCAT	1 cut(s)	589
EcoT38I	GRGCYC	2 cut(s)	1116, 1225
EgeI	GGCGCC	1 cut(s)	616
EheI	GGCGCC	1 cut(s)	616
FaqI	GGGAC	1 cut(s)	629
FauI	CCCGC	1 cut(s)	884
FauNDI	CATATG	3 cut(s)	283, 352, 1126
Fnu4HI	GCNGC	8 cut(s)	753, 780, 819, 822, 1325, 1371, 1407, 1443
FokI	GGATG	3 cut(s)	425, 574, 858
FriOI	GRGCYC	2 cut(s)	1116, 1225
Fsp4HI	GCNGC	8 cut(s)	753, 780, 819, 822, 1325, 1371, 1407, 1443
FspBI	CTAG	3 cut(s)	540, 767, 803
GlaI	GCGC	3 cut(s)	616, 1473, 1508
GluI	GCNGC	8 cut(s)	753, 780, 819, 822, 1325, 1371, 1407, 1443
GsaI	CCCAGC	2 cut(s)	119, 813
GsuI	CTGGAG	2 cut(s)	1355, 1477
HaeII	RGCGCY	1 cut(s)	618
HaeIII	GGCC	1 cut(s)	818
HhaI	GCGC	3 cut(s)	617, 1474, 1509
Hin1I	GRCGYC	1 cut(s)	615
Hin6I	GCGC	3 cut(s)	615, 1472, 1507
HinP1I	GCGC	3 cut(s)	615, 1472, 1507
HindIII	AAGCTT	1 cut(s)	865
HinfI	GANTC	6 cut(s)	111, 290, 857, 970, 1160, 1236
HphI	GGTGA	5 cut(s)	16, 430, 724, 929, 1118
Hpy166II	GTNNAC	1 cut(s)	920
Hpy188I	TCNGA	8 cut(s)	110, 184, 295, 553, 862, 984, 1159, 1165
Hpy8I	GTNNAC	1 cut(s)	920
Hpy99I	CGWCG	3 cut(s)	318, 335, 1142
HpyAV	CCTTC	5 cut(s)	94, 348, 434, 709, 1164
HpyCH4III	ACNGT	1 cut(s)	1065
HpyCH4IV	ACGT	2 cut(s)	1140, 1375
HpyF10VI	GCNNNNNNNGC	3 cut(s)	815, 1019, 1330
HpyF3I	CTNAG	9 cut(s)	107, 183, 288, 533, 561, 630, 908, 924, 1481
HpySE526I	ACGT	2 cut(s)	1140, 1375
Hsp92I	GRCGYC	1 cut(s)	615
HspAI	GCGC	3 cut(s)	615, 1472, 1507
KasI	GGCGCC	1 cut(s)	614
Kzo9I	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
LguI	GCTCTTC	1 cut(s)	1104
LmnI	GCTCC	2 cut(s)	464, 1220
Lsp1109I	GCAGC	7 cut(s)	739, 766, 833, 1336, 1382, 1418, 1429
LweI	GCATC	2 cut(s)	596, 1140
MaeI	CTAG	3 cut(s)	540, 767, 803
MaeII	ACGT	2 cut(s)	1140, 1375
MaeIII	GTNAC	2 cut(s)	4, 427
MalI	GATC	8 cut(s)	127, 481, 759, 794, 798, 999, 1053, 1260
MboI	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
MboII	GAAGA	9 cut(s)	272, 278, 319, 963, 979, 1121, 1191, 1474, 1477
MfeI	CAATTG	1 cut(s)	1359
MflI	RGATCY	3 cut(s)	125, 479, 1051
MhlI	GDGCHC	3 cut(s)	519, 1116, 1225
Mly113I	GGCGCC	1 cut(s)	615
MlyI	GAGTC	2 cut(s)	299, 979
MmeI	TCCRAC	3 cut(s)	273, 928, 1544
Mph1103I	ATGCAT	1 cut(s)	589
MroXI	GAANNNNTTC	2 cut(s)	444, 547
MseI	TTAA	5 cut(s)	213, 300, 935, 1313, 1349
MslI	CAYNNNNRTG	3 cut(s)	669, 671, 767
MspA1I	CMGCKG	1 cut(s)	779
MspCI	CTTAAG	2 cut(s)	1312, 1348
MspR9I	CCNGG	2 cut(s)	502, 597
MunI	CAATTG	1 cut(s)	1359
MvaI	CCWGG	2 cut(s)	502, 597
MvnI	CGCG	1 cut(s)	1414
MwoI	GCNNNNNNNGC	3 cut(s)	815, 1019, 1330
NarI	GGCGCC	1 cut(s)	615
NdeI	CATATG	3 cut(s)	283, 352, 1126
NdeII	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
NlaIV	GGNNCC	5 cut(s)	273, 377, 481, 516, 616
NmuCI	GTSAC	2 cut(s)	4, 427
NsiI	ATGCAT	1 cut(s)	589
NspI	RCATGY	2 cut(s)	587, 1078
NspV	TTCGAA	1 cut(s)	1423
OliI	CACNNNNGTG	2 cut(s)	671, 767
PaeI	GCATGC	1 cut(s)	1078
PaeR7I	CTCGAG	2 cut(s)	304, 1224
PagI	TCATGA	2 cut(s)	889, 1500
PciSI	GCTCTTC	1 cut(s)	1104
PcsI	WCGNNNNNNNCGW	1 cut(s)	397
PdmI	GAANNNNTTC	2 cut(s)	444, 547
PfeI	GAWTC	4 cut(s)	111, 857, 1160, 1236
PflFI	GACNNNGTC	1 cut(s)	312
PkrI	GCNGC	8 cut(s)	754, 781, 820, 823, 1326, 1372, 1408, 1444
PleI	GAGTC	2 cut(s)	298, 978
PluTI	GGCGCC	1 cut(s)	618
PmaCI	CACGTG	1 cut(s)	1376
PmlI	CACGTG	1 cut(s)	1376
PpsI	GAGTC	2 cut(s)	298, 978
Ppu21I	YACGTR	1 cut(s)	1376
PpuMI	RGGWCCY	1 cut(s)	272
PsiI	TTATAA	2 cut(s)	366, 1293
Psp124BI	GAGCTC	2 cut(s)	1116, 1225
Psp5II	RGGWCCY	1 cut(s)	272
Psp6I	CCWGG	2 cut(s)	500, 595
PspCI	CACGTG	1 cut(s)	1376
PspEI	GGTNACC	1 cut(s)	4
PspFI	CCCAGC	2 cut(s)	115, 809
PspGI	CCWGG	2 cut(s)	500, 595
PspN4I	GGNNCC	5 cut(s)	273, 377, 481, 516, 616
PspPI	GGNCC	2 cut(s)	272, 1037
PspPPI	RGGWCCY	1 cut(s)	272
PspXI	VCTCGAGB	1 cut(s)	1224
PstI	CTGCAG	3 cut(s)	125, 1084, 1494
PstNI	CAGNNNCTG	1 cut(s)	1330
PsuI	RGATCY	3 cut(s)	125, 479, 1051
PsyI	GACNNNGTC	1 cut(s)	312
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	1 cut(s)	1541
RsaNI	GTAC	1 cut(s)	1540
RseI	CAYNNNNRTG	3 cut(s)	669, 671, 767
SacI	GAGCTC	2 cut(s)	1116, 1225
SapI	GCTCTTC	1 cut(s)	1104
SaqAI	TTAA	5 cut(s)	213, 300, 935, 1313, 1349
SatI	GCNGC	8 cut(s)	753, 780, 819, 822, 1325, 1371, 1407, 1443
Sau3AI	GATC	8 cut(s)	125, 479, 757, 792, 796, 997, 1051, 1258
Sau96I	GGNCC	2 cut(s)	272, 1037
SchI	GAGTC	2 cut(s)	299, 979
ScrFI	CCNGG	2 cut(s)	502, 597
SduI	GDGCHC	3 cut(s)	519, 1116, 1225
SfaNI	GCATC	2 cut(s)	596, 1140
SfcI	CTRYAG	4 cut(s)	121, 648, 1080, 1490
SfoI	GGCGCC	1 cut(s)	616
Sfr274I	CTCGAG	2 cut(s)	304, 1224
SfuI	TTCGAA	1 cut(s)	1423
SinI	GGWCC	2 cut(s)	272, 1037
SlaI	CTCGAG	2 cut(s)	304, 1224
SmiMI	CAYNNNNRTG	3 cut(s)	669, 671, 767
SmlI	CTYRAG	5 cut(s)	206, 304, 1224, 1312, 1348
SmoI	CTYRAG	5 cut(s)	206, 304, 1224, 1312, 1348
SpeI	ACTAGT	1 cut(s)	766
SphI	GCATGC	1 cut(s)	1078
SsiI	CCGC	3 cut(s)	156, 819, 877
SspDI	GGCGCC	1 cut(s)	614
SspMI	CTAG	3 cut(s)	540, 767, 803
SstI	GAGCTC	2 cut(s)	1116, 1225
StyD4I	CCNGG	2 cut(s)	500, 595
TaaI	ACNGT	1 cut(s)	1065
TaiI	ACGT	2 cut(s)	1143, 1378
TaqI	TCGA	7 cut(s)	169, 305, 333, 391, 795, 1225, 1423
TatI	WGTACW	1 cut(s)	1539
TauI	GCSGC	1 cut(s)	821
TfiI	GAWTC	4 cut(s)	111, 857, 1160, 1236
Tru1I	TTAA	5 cut(s)	213, 300, 935, 1313, 1349
Tru9I	TTAA	5 cut(s)	213, 300, 935, 1313, 1349
TscAI	CASTG	2 cut(s)	1138, 1499
TseFI	GTSAC	2 cut(s)	4, 427
TseI	GCWGC	7 cut(s)	752, 779, 821, 1324, 1370, 1406, 1442
Tsp45I	GTSAC	2 cut(s)	4, 427
TspDTI	ATGAA	7 cut(s)	376, 453, 906, 932, 1015, 1489, 1517
TspGWI	ACGGA	2 cut(s)	824, 872
TspRI	CASTG	2 cut(s)	1138, 1499
Tth111I	GACNNNGTC	1 cut(s)	312
Vha464I	CTTAAG	2 cut(s)	1312, 1348
VpaK11BI	GGWCC	2 cut(s)	272, 1037
XapI	RAATTY	2 cut(s)	382, 455
XceI	RCATGY	2 cut(s)	587, 1078
XhoI	CTCGAG	2 cut(s)	304, 1224
XmnI	GAANNNNTTC	2 cut(s)	444, 547
XspI	CTAG	3 cut(s)	540, 767, 803
Zsp2I	ATGCAT	1 cut(s)	589

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.