pycom12g16720

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
19038212 .. 19042908
4697 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g16720.8

Sequence Viewer

Length: 4158 bp
ATGTATGTCTTGATGGTAAACGTAGTTCGGCCGTCGGAATGCCGAACCCTGAAACCTACTTGCGAGTATCCAATCATAAAACCACTCGGCGTCCTGTGCGCCGAGCAATGTGACCTCTCGGTCGACCTCGACGCAGTGCTGTTTATCCAAACTGAAGGTGCTTCTCGGTCGGCTGATTCTGCGGCAGCAGTGCTGTTTATCCAAACTGAAGGTGCTCGCCGGGCGCTTCCACAGTGCTGTTTATCCAAACTGAAGGTGTGTCGGCAGGAAAAGAAAAGGAAAAATCTCAAGGTGTTTGAGAGGTTTTGCGCAGGGCAATTGTATGCTGATTTGCCCTATTCCTTGAACCGACTCCGATTTGGATTGGGAGTCCTTGTCCCATTTTGCTTCTTCCTCGAACAAACCTACTCCTACTGGGATTCTGAATTTTCCTTCTTTTCGGGACTTCGTTCCTTGCTGGTCGAGAATCCTAGTTGCACCAGGACTTCCTCGACCTTTCTATTTATCTGGACTACTTATGATAGGATTTGGCCGACCCTGTTAGCTGGCCCGGGCCCTATTATTCGGCCCATAGCATTTATCATCTCCTTGGGCCGAGCACATCCTGCTGCTCGGCCCAGCAATAATATTTTGGGCCCAAACATTGCCCCCTCGCTTCTGAGGTCGCCGACCGTTAACTCTTGGTCGGGCCTCGACCTTGAAGAATCCTGCGCATTTATGAGGCATGATTGCACTTTCCTCGTTGCCCCCAAAGCGTGGCCACGTGTCGATCCACCGCCGCTCTTAGGCCTTTCAATCGTGGGCCTTAAAACTGGCGTCGCACGTAATCGTGCGTCCTGGATTTTCGACTTCTCGATCCCCTCTTCGCAGGTTCCCAAAATATCCGAAATGATTGAGCCTTTCCCGGTTAAATTTCCCCCCAATTTGAACCAATACTTTTCGAATCCCAGACGTTTGATATTCATCCTGAAAGTCCCTCATCCTTGTTCGTTCAAATCAAACCTTCCAGTTCTTCCTTCTGCAATACCTTCTTTTTCCAGAAACATCTCTTCTCCACAAATGGCCTCCTTCATTTCAAAGCTCTCTGATGAGATCAACAAGTGCAAGGATTTCATCGATCGGAACGCCGTCAAGACGCTACGATTTGAAGAAGACATGGCCACGACCCACCAAATTCTGGGTCCCCTCTTCAGGGACGCAGTGCCGTCGTCTGTCACTAACCTGCTCAAGGAGCAGTGCCTAGCACCCCTGCTTCAAGGGTTTGACTGGTCGAAATGGTGCTTGGCTCGGCCTCAAGGAGCGTGGCCCTCGACCACCACGGCCTGGGCCGCCTGGGTAGACCGAATGAAATCCTTCTTCGGCAAAGAGTGGAAAGCCCTTGGTATCTATGATGCCATCCTGCTCTCGTCCATGGAGATCACCATGGACAATGAGCTTCTTATGGCGGCCTTGACCCTATGGTGTTCGGCCACCAACACCATGGTCCTTCCATTCGGACCTCTCGGCCCTACAATCCTCGACATCTCGGCCATTCTTGGGACTCCACCATCCGGTCTCCCAATCGATGCCGCTCTTTCTGGATGCCCCTCCCTCCTCGACCTGAAGGCGCTTTTCGACGAGCGGGCTGTCAAAACGCTCAGCCGAGGCGGTCGGGAGCCTTCAAGAGAAGAAGTTCAAAAGCTTCATAAGAACTTCTTCAACTACAATACTCTGGTTCCCCATTTTGCCGGCCGAGGCGAGGAGAGTCTCAGGAAGGGAGAACATGAAGCCTTCCTCTTCTATTGGTACAACAAATTTATTTGTTGTACCAGGTCGAACAAGTGCTTGGTCGAGAATATGCCAGTGGCCCAGGCCCTGGCTAGTGGTCACTCTCTGGCACTTAGCCCGGCTATTCTTGCCAACATTTTTCATTGCTTGGCCGAGACGACCATCAACAAGATTGACCCGCACCAGAATGGGCCCCTCTGGGTTTTCCAACTCTGGCTGCAGGTCTATTTTTCCACTCTTCGGCCTGAGGTCCCCGCCTTCCAGCGCTCGGCCGCCCTCGGCCCCCAACTTGCCTCTCGACCGTCTCGATGTTCTTTCGGACGACGAGTTCTTGGTGTGCCGGCGCCAGGAGTACCCTGCGTCAATCGGGCTCCCGACGGCAACTTGGGCCTCGGCCGAGGACGCGGGCCTTCGTCAGTCCTGGGGGTCAATCGTACTGGCTCGCGACCTTCCCCTTGGTTGCGACGCTCGCCGAGCCGGTTGAGAGGTCTACCAGCCCCACTTCGTCGCCCGACAGCTCGGCTACCTCCAAGGTTGCCCTGTACCCCTGATCGTCTCTCGTTCCCTCCTGAGCCGGGGACGTCTTTCTGGTTTTTCCGAGAGGGAGTGCCGGACGACGGAGCAGGAGTTTCAGGATCAGTGCAAGAAGTTCCGTCTTCGGCCAACCGTTCCGGAATCCTTGGGCACCGACACATTTGGGGACTGGTGGGACGAGTACGCTGGCGACTTCTTCGGCGCCTCGGCCGAAGACGTGGTGAGCAAAGTGAGTCGGTCCAAGGTATATTGTTGACTAATTGCTTTGCCAGTTCAGAAAAACTCACTTGTCCTTGTTTACTAATTGCTTTGCTACTTCAGGGGGTCGTGGGTCGAAAACTGTCGAGAAGGGGACCCTTGTCACCGAGCGGTCGGTCCCTGCCAAACGCCCCCACCAAGAGACCGAGCCGGCGGAAAAGGCCCATCGCCCTTCTAAACGCGTCAAGAAATTGGCGAAGAAGGGCGACCGGGAAATTCATGTCGTCCCCAGTGACACTATTGGGACGCCTGCTCCTGCCGGCTCTCCAACTGTGCCGGCTACCCCGGCATCTCCAACCCCGAATCCTCCAGCCGTTTCCCCGGCCGATCCAATCGTCGCACCCGCTCCAGCTTCGGAGCCGGTTGTGGTACCTGAAGTGGGGAAGTCGGCTGCGCCTGCCGAAGCACCCTTGTCTCCAACGGTCGTTTTGGAGGTATAATTCTGCTTCCACTTGCTTCTTTAGGTTTCTGGTCAGCGAGAGTGACGAAGTCCCGCTGCAACGTCGCCGTCGACCAGTCAACTCTCCTCCCGTCCATCCTCCTCCTGTAGTCGAGGTGACCGCTCGACCACGTCCTACTGCGGCGGATCGTGGTAAGAGACCCATGGTCGATCCTGAGGCCACGGCCGAGTCATCGATCCACCCGCAGGACGAAGACCCTCCCATTCCTCCACAGGAAGTTTCTTCGGCCTTTGTAAGTCTCGCTTTTTGTTGTCAGGTGCCCGAACATTCATTTCACCGGCAGTTTTATGCGCCGAGGGGCGTTGTCTATATTTCCTGGCCGCCGTCGTGGCCATCAAATGTAGATAACCTCCATCAGCCGCGTGAATTGCGTAGCGGTCTAAGGCACTGGGCTCGGCCATTAAGCTCCCTGGGTTCGAGCAATGACCCAGAGGGCATGGCCGAAGCACTATATCACGTCTTACTTTCCCTCACAGTATTCCTTTTATGTGCACAGCCATCGTGGGAAGTGGAGCTCGACGCTCTTCTTCAGAGCACGACCGGTGAGGTCGGCTCCTCTGCAGCTCCGGCCGAATCGGCGGGAGCCACGCCCGCCGAAGTCTTCGTGAAGCTGCACGAAGTCCTGTCTCTGACTGCTTCCCAAGTTCTCCGGTGCAAGGGCCTTGACTCTGTTGGAGAGTGTCTCAATGACCTCGCCAGCGGTGGTCACCTGAGCCCGGAGGGCATCTCTTTCCTAACCGACCTCCTAGAGCGGACTCGGCAACACTTTCTTATCTTTGAGCGTGCCCTACAGGCCGAGGACGATTTGAAGGTGGCCAAGGTTGCGCATGAGGCTGGCCGAGTAGAGATGGAGGCTTTCAAGGCAAAGAAAGCAAAGCTGACCGAGTTTGATCTCCAGATCTCTGACCTCCAGCGTCAGATTTCTGACCTTCAACGTCAAAGGTCGGCTGCTGCTTCCGAGCTTGAGAAGGATTTTGAGGCTAACAAGGCTCGGCTGACGGCCTTCGCTGCCGGCGCACGGCGTATCCAGCAACTACAGTGCAACAAGAAGACACGGCAGGCTGAGATAATTTTGAGCGAGGCGAAGTGGCTGGAGCTGAAAGCTGCCCTTGAGACTTACCTCCCCTCGACCCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1386

Amino Acids

154.27

Weight (kDa)

9.63

Isoelectric Point (pI)

63.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 119
AatII GACGTC 1 cut(s) 2351
Acc16I TGCGCA 3 cut(s) 310, 712, 3846
Acc36I ACCTGC 3 cut(s) 859, 1230, 1978
Acc65I GGTACC 1 cut(s) 2928
AccB1I GGYRCC 5 cut(s) 2110, 2451, 2502, 2928, 3277
AccB7I CCANNNNNTGG 4 cut(s) 756, 1177, 1323, 1855
AccBSI CCGCTC 7 cut(s) 781, 1571, 1621, 2670, 2905, 3122, 3772
AccI GTMKAC 4 cut(s) 123, 1338, 2257, 3070
AccII CGCG 4 cut(s) 2172, 2212, 2741, 3382
AccIII TCCGGA 1 cut(s) 2438
AclWI GGATC 7 cut(s) 764, 850, 2410, 2881, 3153, 3164, 3190
AcsI RAATTY 5 cut(s) 425, 911, 1173, 1793, 2774
AcuI CTGAAG 8 cut(s) 174, 228, 272, 1174, 1622, 2603, 2954, 3533
AcvI CACGTG 1 cut(s) 764
AcyI GRCGYC 6 cut(s) 90, 816, 2111, 2348, 2503, 2806
AfaI GTAC 7 cut(s) 1787, 1807, 2121, 2203, 2311, 2484, 2930
AfeI AGCGCT 1 cut(s) 2033
AflIII ACRYGT 2 cut(s) 763, 2739
AgeI ACCGGT 1 cut(s) 3560
AhdI GACNNNNNGTC 1 cut(s) 3164
AjiI CACGTC 3 cut(s) 2519, 3131, 3478
AjuI GAANNNNNNNTTGG 4 cut(s) 1265, 1297, 1808, 1840
AloI GAACNNNNNNTCC 2 cut(s) 2079, 2111
Alw21I GWGCWC 5 cut(s) 217, 601, 3514, 3537, 3557
Alw44I GTGCAC 1 cut(s) 3510
AlwI GGATC 7 cut(s) 764, 850, 2410, 2881, 3153, 3164, 3190
AlwNI CAGNNNCTG 1 cut(s) 1855
Ama87I CYCGRG 1 cut(s) 550
Aor13HI TCCGGA 1 cut(s) 2438
Aor51HI AGCGCT 1 cut(s) 2033
ApaI GGGCCC 3 cut(s) 557, 638, 1962
ApaLI GTGCAC 1 cut(s) 3510
ApoI RAATTY 5 cut(s) 425, 911, 1173, 1793, 2774
ArsI GACNNNNNNTTYG 2 cut(s) 1165, 1197
AsiGI ACCGGT 1 cut(s) 3560
Asp700I GAANNNNTTC 3 cut(s) 1352, 1671, 1694
Asp718I GGTACC 1 cut(s) 2928
AsuHPI GGTGA 7 cut(s) 1411, 2534, 2655, 3127, 3287, 3575, 3719
AsuII TTCGAA 1 cut(s) 941
AvaI CYCGRG 1 cut(s) 550
AvaII GGWCC 7 cut(s) 1181, 1483, 1496, 2017, 2539, 2654, 2676
AxyI CCTNAGG 2 cut(s) 2013, 3174
BaeGI GKGCMC 7 cut(s) 557, 638, 1962, 2454, 3282, 3514, 3808
BalI TGGCCA 4 cut(s) 760, 1160, 3352, 3836
BanI GGYRCC 5 cut(s) 2110, 2451, 2502, 2928, 3277
BanII GRGCYC 7 cut(s) 557, 638, 1962, 2140, 3415, 3537, 3737
BbrPI CACGTG 1 cut(s) 764
BbsI GAAGAC 6 cut(s) 1158, 2415, 2521, 3219, 3613, 4076
Bbv12I GWGCWC 5 cut(s) 217, 601, 3514, 3537, 3557
BcgI CGANNNNNNTGC 8 cut(s) 721, 755, 1188, 1222, 3395, 3429, 3501, 3535
BciVI GTATCC 2 cut(s) 78, 4055
BfaI CTAG 4 cut(s) 471, 1241, 1860, 3767
BfmI CTRYAG 5 cut(s) 1985, 3105, 3579, 3809, 4055
BfoI RGCGCY 5 cut(s) 227, 1610, 2035, 2114, 2506
BfuAI ACCTGC 3 cut(s) 859, 1230, 1978
BfuI GTATCC 2 cut(s) 78, 4055
BglI GCCNNNNNGGC 4 cut(s) 3349, 3596, 3741, 3812
BglII AGATCT 1 cut(s) 3918
BlpI GCTNAGC 1 cut(s) 1637
Bme18I GGWCC 7 cut(s) 1181, 1483, 1496, 2017, 2539, 2654, 2676
BmeRI GACNNNNNGTC 1 cut(s) 3164
BmeT110I CYCGRG 1 cut(s) 550
BmgBI CACGTC 3 cut(s) 2519, 3131, 3478
BmrI ACTGGG 3 cut(s) 424, 2783, 3418
BmsI GCATC 5 cut(s) 1381, 1555, 1571, 2857, 3753
BmuI ACTGGG 3 cut(s) 424, 2783, 3418
BoxI GACNNNNGTC 1 cut(s) 2659
BpiI GAAGAC 6 cut(s) 1158, 2415, 2521, 3219, 3613, 4076
BplI GAGNNNNNCTC 6 cut(s) 3557, 3589, 3687, 3719, 3731, 3763
BpmI CTGGAG 5 cut(s) 2852, 2891, 3899, 3914, 4133
Bpu10I CCTNAGC 2 cut(s) 2337, 3731
Bpu1102I GCTNAGC 1 cut(s) 1637
Bpu14I TTCGAA 1 cut(s) 941
BpuEI CTTGAG 5 cut(s) 272, 1211, 1278, 4004, 4151
Bsa29I ATCGAT 3 cut(s) 1116, 1563, 3194
BsaAI YACGTR 2 cut(s) 764, 824
BsaBI GATNNNNATC 1 cut(s) 962
BsaHI GRCGYC 6 cut(s) 90, 816, 2111, 2348, 2503, 2806
BsaI GGTCTC 3 cut(s) 1559, 2695, 3151
BsaWI WCCGGW 4 cut(s) 1550, 2438, 3560, 3669
BsaXI ACNNNNNCTCC 6 cut(s) 360, 390, 2379, 2409, 2796, 2826
Bse21I CCTNAGG 2 cut(s) 2013, 3174
Bse3DI GCAATG 4 cut(s) 113, 642, 1909, 3448
Bse8I GATNNNNATC 1 cut(s) 962
BseAI TCCGGA 1 cut(s) 2438
BseCI ATCGAT 3 cut(s) 1116, 1563, 3194
BseGI GGATG 7 cut(s) 601, 963, 979, 1395, 1547, 1586, 3094
BseJI GATNNNNATC 1 cut(s) 962
BseMI GCAATG 4 cut(s) 113, 642, 1909, 3448
BseMII CTCAG 8 cut(s) 650, 1651, 1762, 2004, 2328, 3165, 3722, 4074
BseRI GAGGAG 5 cut(s) 1583, 1754, 3075, 3090, 3565
BseSI GKGCMC 7 cut(s) 557, 638, 1962, 2454, 3282, 3514, 3808
BseX3I CGGCCG 8 cut(s) 29, 1729, 2037, 2161, 2509, 2882, 3183, 3588
BseYI CCCAGC 1 cut(s) 617
BsgI GTGCAG 1 cut(s) 3617
Bsh1236I CGCG 4 cut(s) 2172, 2212, 2741, 3382
BshNI GGYRCC 5 cut(s) 2110, 2451, 2502, 2928, 3277
BshTI ACCGGT 1 cut(s) 3560
BshVI ATCGAT 3 cut(s) 1116, 1563, 3194
BsiHKAI GWGCWC 5 cut(s) 217, 601, 3514, 3537, 3557
BsiHKCI CYCGRG 1 cut(s) 550
BsmBI CGTCTC 3 cut(s) 1916, 2076, 2327
BsmI GAATGC 1 cut(s) 44
Bso31I GGTCTC 3 cut(s) 1559, 2695, 3151
BsoBI CYCGRG 1 cut(s) 550
Bsp119I TTCGAA 1 cut(s) 941
Bsp120I GGGCCC 3 cut(s) 553, 634, 1958
Bsp13I TCCGGA 1 cut(s) 2438
Bsp1720I GCTNAGC 1 cut(s) 1637
Bsp19I CCATGG 4 cut(s) 1410, 1422, 1479, 3162
Bsp68I TCGCGA 1 cut(s) 2212
BspCNI CTCAG 8 cut(s) 651, 1650, 1761, 2005, 2329, 3166, 3723, 4075
BspDI ATCGAT 3 cut(s) 1116, 1563, 3194
BspEI TCCGGA 1 cut(s) 2438
BspFNI CGCG 4 cut(s) 2172, 2212, 2741, 3382
BspMAI CTGCAG 2 cut(s) 1989, 3583
BspMI ACCTGC 3 cut(s) 859, 1230, 1978
BspPI GGATC 7 cut(s) 764, 850, 2410, 2881, 3153, 3164, 3190
BspQI GCTCTTC 1 cut(s) 3549
BspT104I TTCGAA 1 cut(s) 941
BspT107I GGYRCC 5 cut(s) 2110, 2451, 2502, 2928, 3277
BspTNI GGTCTC 3 cut(s) 1559, 2695, 3151
BsrBI CCGCTC 7 cut(s) 781, 1571, 1621, 2670, 2905, 3122, 3772
BsrDI GCAATG 4 cut(s) 113, 642, 1909, 3448
BssNI GRCGYC 6 cut(s) 90, 816, 2111, 2348, 2503, 2806
Bst4CI ACNGT 9 cut(s) 234, 673, 2070, 2435, 2643, 2832, 2982, 3496, 4059
Bst6I CTCTTC 6 cut(s) 868, 1054, 1193, 1781, 2010, 3549
BstACI GRCGYC 6 cut(s) 90, 816, 2111, 2348, 2503, 2806
BstAPI GCANNNNNTGC 1 cut(s) 605
BstBAI YACGTR 2 cut(s) 764, 824
BstBI TTCGAA 1 cut(s) 941
BstDSI CCRYGG 6 cut(s) 1317, 1410, 1422, 1479, 3162, 3180
BstEII GGTNACC 2 cut(s) 3115, 3725
BstENI CCTNNNNNAGG 1 cut(s) 1226
BstF5I GGATG 7 cut(s) 601, 963, 979, 1395, 1547, 1586, 3094
BstFNI CGCG 4 cut(s) 2172, 2212, 2741, 3382
BstH2I RGCGCY 5 cut(s) 227, 1610, 2035, 2114, 2506
BstPAI GACNNNNGTC 1 cut(s) 2659
BstPI GGTNACC 2 cut(s) 3115, 3725
BstSFI CTRYAG 5 cut(s) 1985, 3105, 3579, 3809, 4055
BstSLI GKGCMC 7 cut(s) 557, 638, 1962, 2454, 3282, 3514, 3808
BstUI CGCG 4 cut(s) 2172, 2212, 2741, 3382
BstV2I GAAGAC 6 cut(s) 1158, 2415, 2521, 3219, 3613, 4076
BstX2I RGATCY 1 cut(s) 3918
BstXI CCANNNNNNTGG 1 cut(s) 1480
BstYI RGATCY 1 cut(s) 3918
BstZI CGGCCG 8 cut(s) 29, 1729, 2037, 2161, 2509, 2882, 3183, 3588
Bsu15I ATCGAT 3 cut(s) 1116, 1563, 3194
Bsu36I CCTNAGG 2 cut(s) 2013, 3174
BsuI GTATCC 2 cut(s) 78, 4055
BsuTUI ATCGAT 3 cut(s) 1116, 1563, 3194
BtgI CCRYGG 6 cut(s) 1317, 1410, 1422, 1479, 3162, 3180
BtgZI GCGATG 1 cut(s) 2710
BtrI CACGTC 3 cut(s) 2519, 3131, 3478
BtsCI GGATG 7 cut(s) 601, 963, 979, 1395, 1547, 1586, 3094
BtsI GCAGTG 4 cut(s) 141, 195, 1206, 1241
BtuMI TCGCGA 1 cut(s) 2212
BveI ACCTGC 3 cut(s) 859, 1230, 1978
CaiI CAGNNNCTG 1 cut(s) 1855
Cfr9I CCCGGG 1 cut(s) 550
ClaI ATCGAT 3 cut(s) 1116, 1563, 3194
CsiI ACCWGGT 1 cut(s) 1808
Csp6I GTAC 7 cut(s) 1786, 1806, 2120, 2202, 2310, 2483, 2929
CspAI ACCGGT 1 cut(s) 3560
CspCI CAANNNNNGTGG 2 cut(s) 1283, 1318
CviQI GTAC 7 cut(s) 1786, 1806, 2120, 2202, 2310, 2483, 2929
DinI GGCGCC 2 cut(s) 2112, 2504
DrdI GACNNNNNNGTC 1 cut(s) 119
DriI GACNNNNNGTC 1 cut(s) 3164
DseDI GACNNNNNNGTC 1 cut(s) 119
EagI CGGCCG 8 cut(s) 29, 1729, 2037, 2161, 2509, 2882, 3183, 3588
Eam1104I CTCTTC 6 cut(s) 868, 1054, 1193, 1781, 2010, 3549
Eam1105I GACNNNNNGTC 1 cut(s) 3164
EarI CTCTTC 6 cut(s) 868, 1054, 1193, 1781, 2010, 3549
EciI GGCGGA 2 cut(s) 2728, 3158
Ecl136II GAGCTC 1 cut(s) 3535
EclXI CGGCCG 8 cut(s) 29, 1729, 2037, 2161, 2509, 2882, 3183, 3588
Eco147I AGGCCT 1 cut(s) 789
Eco24I GRGCYC 7 cut(s) 557, 638, 1962, 2140, 3415, 3537, 3737
Eco31I GGTCTC 3 cut(s) 1559, 2695, 3151
Eco47I GGWCC 7 cut(s) 1181, 1483, 1496, 2017, 2539, 2654, 2676
Eco47III AGCGCT 1 cut(s) 2033
Eco52I CGGCCG 8 cut(s) 29, 1729, 2037, 2161, 2509, 2882, 3183, 3588
Eco53kI GAGCTC 1 cut(s) 3535
Eco57I CTGAAG 8 cut(s) 174, 228, 272, 1174, 1622, 2603, 2954, 3533
Eco72I CACGTG 1 cut(s) 764
Eco81I CCTNAGG 2 cut(s) 2013, 3174
Eco88I CYCGRG 1 cut(s) 550
Eco91I GGTNACC 2 cut(s) 3115, 3725
EcoICRI GAGCTC 1 cut(s) 3535
EcoNI CCTNNNNNAGG 1 cut(s) 1226
EcoO109I RGGNCCY 7 cut(s) 554, 1181, 1852, 1959, 2017, 2654, 3679
EcoO65I GGTNACC 2 cut(s) 3115, 3725
EcoT38I GRGCYC 7 cut(s) 557, 638, 1962, 2140, 3415, 3537, 3737
EgeI GGCGCC 2 cut(s) 2112, 2504
EheI GGCGCC 2 cut(s) 2112, 2504
Esp3I CGTCTC 3 cut(s) 1916, 2076, 2327
FalI AAGNNNNNCTT 6 cut(s) 1679, 1711, 3247, 3279, 4113, 4145
FauI CCCGC 9 cut(s) 1614, 1953, 2029, 2165, 2910, 3060, 3210, 3592, 3619
FblI GTMKAC 4 cut(s) 123, 1338, 2257, 3070
FokI GGATG 7 cut(s) 588, 950, 966, 1382, 1534, 1593, 3081
FriOI GRGCYC 7 cut(s) 557, 638, 1962, 2140, 3415, 3537, 3737
FspBI CTAG 4 cut(s) 471, 1241, 1860, 3767
FspI TGCGCA 3 cut(s) 310, 712, 3846
GsaI CCCAGC 1 cut(s) 621
GsuI CTGGAG 5 cut(s) 2852, 2891, 3899, 3914, 4133
HaeII RGCGCY 5 cut(s) 227, 1610, 2035, 2114, 2506
Hin1I GRCGYC 6 cut(s) 90, 816, 2111, 2348, 2503, 2806
HincII GTYRAC 5 cut(s) 124, 676, 2556, 3071, 3079
HindII GTYRAC 5 cut(s) 124, 676, 2556, 3071, 3079
HindIII AAGCTT 1 cut(s) 1679
HpaI GTTAAC 1 cut(s) 676
HphI GGTGA 7 cut(s) 1411, 2534, 2655, 3127, 3287, 3575, 3719
HpyCH4III ACNGT 9 cut(s) 234, 673, 2070, 2435, 2643, 2832, 2982, 3496, 4059
Hsp92I GRCGYC 6 cut(s) 90, 816, 2111, 2348, 2503, 2806
KasI GGCGCC 2 cut(s) 2110, 2502
KflI GGGWCCC 2 cut(s) 1181, 2654
Kpn2I TCCGGA 1 cut(s) 2438
KpnI GGTACC 1 cut(s) 2932
KroI GCCGGC 6 cut(s) 1727, 2107, 2709, 2818, 2835, 4031
KroNI GCCGGC 6 cut(s) 1729, 2109, 2711, 2820, 2837, 4033
KspAI GTTAAC 1 cut(s) 676
LguI GCTCTTC 1 cut(s) 3549
LweI GCATC 5 cut(s) 1381, 1555, 1571, 2857, 3753
MabI ACCWGGT 1 cut(s) 1808
MaeI CTAG 4 cut(s) 471, 1241, 1860, 3767
MaeIII GTNAC 8 cut(s) 110, 1213, 1865, 2661, 2791, 3041, 3115, 3725
MbiI CCGCTC 7 cut(s) 781, 1571, 1621, 2670, 2905, 3122, 3772
MfeI CAATTG 1 cut(s) 317
MflI RGATCY 1 cut(s) 3918
MlsI TGGCCA 4 cut(s) 760, 1160, 3352, 3836
MluI ACGCGT 1 cut(s) 2739
MluNI TGGCCA 4 cut(s) 760, 1160, 3352, 3836
Mly113I GGCGCC 2 cut(s) 2111, 2503
MlyI GAGTC 8 cut(s) 345, 378, 1534, 1753, 2543, 3197, 3680, 3769
MmeI TCCRAC 6 cut(s) 15, 1999, 2851, 2878, 3001, 3673
Mox20I TGGCCA 4 cut(s) 760, 1160, 3352, 3836
MroI TCCGGA 1 cut(s) 2438
MroNI GCCGGC 6 cut(s) 1727, 2107, 2709, 2818, 2835, 4031
MroXI GAANNNNTTC 3 cut(s) 1352, 1671, 1694
MscI TGGCCA 4 cut(s) 760, 1160, 3352, 3836
MseI TTAA 4 cut(s) 675, 807, 909, 3422
MslI CAYNNNNRTG 1 cut(s) 1953
Msp20I TGGCCA 4 cut(s) 760, 1160, 3352, 3836
MspA1I CMGCKG 2 cut(s) 3055, 3720
MunI CAATTG 1 cut(s) 317
Mva1269I GAATGC 1 cut(s) 44
MvnI CGCG 4 cut(s) 2172, 2212, 2741, 3382
NaeI GCCGGC 6 cut(s) 1729, 2109, 2711, 2820, 2837, 4033
NarI GGCGCC 2 cut(s) 2111, 2503
NcoI CCATGG 4 cut(s) 1410, 1422, 1479, 3162
NgoMIV GCCGGC 6 cut(s) 1727, 2107, 2709, 2818, 2835, 4031
NmuCI GTSAC 8 cut(s) 110, 1213, 1865, 2661, 2791, 3041, 3115, 3725
NruI TCGCGA 1 cut(s) 2212
NsbI TGCGCA 3 cut(s) 310, 712, 3846
NspV TTCGAA 1 cut(s) 941
PasI CCCWGGG 1 cut(s) 3430
PceI AGGCCT 1 cut(s) 789
PciSI GCTCTTC 1 cut(s) 3549
PcsI WCGNNNNNNNCGW 2 cut(s) 2071, 3067
PctI GAATGC 1 cut(s) 44
PdiI GCCGGC 6 cut(s) 1729, 2109, 2711, 2820, 2837, 4033
PdmI GAANNNNTTC 3 cut(s) 1352, 1671, 1694
PfeI GAWTC 8 cut(s) 176, 419, 466, 704, 943, 2442, 2862, 3593
PflFI GACNNNGTC 2 cut(s) 3047, 3129
PflMI CCANNNNNTGG 4 cut(s) 756, 1177, 1323, 1855
PfoI TCCNGGA 1 cut(s) 836
PinAI ACCGGT 1 cut(s) 3560
Ple19I CGATCG 1 cut(s) 1120
PleI GAGTC 8 cut(s) 345, 377, 1534, 1752, 2542, 3196, 3680, 3769
PluTI GGCGCC 2 cut(s) 2114, 2506
PmaCI CACGTG 1 cut(s) 764
PmlI CACGTG 1 cut(s) 764
PpsI GAGTC 8 cut(s) 345, 377, 1534, 1752, 2542, 3196, 3680, 3769
Ppu21I YACGTR 2 cut(s) 764, 824
PpuMI RGGWCCY 3 cut(s) 1181, 2017, 2654
PshAI GACNNNNGTC 1 cut(s) 2659
Psp124BI GAGCTC 1 cut(s) 3537
Psp5II RGGWCCY 3 cut(s) 1181, 2017, 2654
PspCI CACGTG 1 cut(s) 764
PspEI GGTNACC 2 cut(s) 3115, 3725
PspFI CCCAGC 1 cut(s) 617
PspOMI GGGCCC 3 cut(s) 553, 634, 1958
PspPPI RGGWCCY 3 cut(s) 1181, 2017, 2654
PsrI GAACNNNNNNTAC 2 cut(s) 9, 41
PstI CTGCAG 2 cut(s) 1989, 3583
PstNI CAGNNNCTG 1 cut(s) 1855
PsuI RGATCY 1 cut(s) 3918
PsyI GACNNNGTC 2 cut(s) 3047, 3129
PvuI CGATCG 1 cut(s) 1120
RruI TCGCGA 1 cut(s) 2212
RsaI GTAC 7 cut(s) 1787, 1807, 2121, 2203, 2311, 2484, 2930
RsaNI GTAC 7 cut(s) 1786, 1806, 2120, 2202, 2310, 2483, 2929
RseI CAYNNNNRTG 1 cut(s) 1953
SacI GAGCTC 1 cut(s) 3537
SalI GTCGAC 2 cut(s) 122, 3069
SapI GCTCTTC 1 cut(s) 3549
SaqAI TTAA 4 cut(s) 675, 807, 909, 3422
SchI GAGTC 8 cut(s) 345, 378, 1534, 1753, 2543, 3197, 3680, 3769
SexAI ACCWGGT 1 cut(s) 1808
SfaNI GCATC 5 cut(s) 1381, 1555, 1571, 2857, 3753
SfcI CTRYAG 5 cut(s) 1985, 3105, 3579, 3809, 4055
SfoI GGCGCC 2 cut(s) 2112, 2504
SfuI TTCGAA 1 cut(s) 941
SinI GGWCC 7 cut(s) 1181, 1483, 1496, 2017, 2539, 2654, 2676
SmaI CCCGGG 1 cut(s) 552
SmiMI CAYNNNNRTG 1 cut(s) 1953
SmlI CTYRAG 5 cut(s) 287, 1226, 1293, 3983, 4130
SmoI CTYRAG 5 cut(s) 287, 1226, 1293, 3983, 4130
SrfI GCCCGGGC 1 cut(s) 552
SseBI AGGCCT 1 cut(s) 789
SspDI GGCGCC 2 cut(s) 2110, 2502
SspI AATATT 1 cut(s) 628
SspMI CTAG 4 cut(s) 471, 1241, 1860, 3767
SstI GAGCTC 1 cut(s) 3537
StuI AGGCCT 1 cut(s) 789
TaaI ACNGT 9 cut(s) 234, 673, 2070, 2435, 2643, 2832, 2982, 3496, 4059
TaqII GACCGA 7 cut(s) 109, 156, 1356, 2527, 2664, 2719, 3917
TauI GCSGC 9 cut(s) 185, 781, 1331, 1448, 1571, 2042, 3143, 3343, 3382
TfiI GAWTC 8 cut(s) 176, 419, 466, 704, 943, 2442, 2862, 3593
Tru1I TTAA 4 cut(s) 675, 807, 909, 3422
Tru9I TTAA 4 cut(s) 675, 807, 909, 3422
TseFI GTSAC 8 cut(s) 110, 1213, 1865, 2661, 2791, 3041, 3115, 3725
Tsp45I GTSAC 8 cut(s) 110, 1213, 1865, 2661, 2791, 3041, 3115, 3725
TspDTI ATGAA 9 cut(s) 952, 1060, 1102, 1361, 1673, 1779, 1898, 2767, 3279
TspGWI ACGGA 2 cut(s) 2400, 2409
TspMI CCCGGG 1 cut(s) 550
Tth111I GACNNNGTC 2 cut(s) 3047, 3129
Van91I CCANNNNNTGG 4 cut(s) 756, 1177, 1323, 1855
VneI GTGCAC 1 cut(s) 3510
VpaK11BI GGWCC 7 cut(s) 1181, 1483, 1496, 2017, 2539, 2654, 2676
XagI CCTNNNNNAGG 1 cut(s) 1226
XapI RAATTY 5 cut(s) 425, 911, 1173, 1793, 2774
XcmI CCANNNNNNNNNTGG 1 cut(s) 1477
XmaI CCCGGG 1 cut(s) 550
XmiI GTMKAC 4 cut(s) 123, 1338, 2257, 3070
XmnI GAANNNNTTC 3 cut(s) 1352, 1671, 1694
XspI CTAG 4 cut(s) 471, 1241, 1860, 3767
ZraI GACGTC 1 cut(s) 2349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.