pycom13g18630

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
14683953 .. 14692837
8885 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g18630.10

Sequence Viewer

Length: 7074 bp
ATGAGGGTGTGTTACAACTTTATAAGAGGTTGTTCTTTGATTGAAGCTCCTGCGAGAGGCAGAAGAATATTGGATTTTTTGGATAGGAAGATTGTATATGTGTTGACCTTCAAAATTACAAAGCCTACGCGGTGCGCAGGCCGAATAACTAATAGGCTAACTAAGTCCTTCGGAGTAAAATTTGTTGATGTTGCGTTGAGCGCGTTGCTCACTTCTTTATCTTGCGACTGCGACCGAGAAAGGAACACTTTCAGTCTTTGGGTTCTAGAGCCTGAAGACGAGGATGCTAGTTCTGCGAAGTTCACAAGTCTACAAGCACGTCGAATCGACACCAGACTATACGGACATAAATATTCAAAGGTGATGTATGTCTTGATGGTGAACGTGGTTCGACCGTCAGAATGCCGAACTCTAAAACTCACTTGTGAATATCCAATCATAAAATCACTCGGCGTCCGATACTCTGAATGTCGTAACTCAAGGATTCGAAAACCCTTGTCGGCCGAGACTTGGATAGATAACCAGTCGGCCTCGACGCAGTGCTGTTTATCCAAACTGAAGGTGCTCCTCGGTCGGCTGATTCTACGGCAACAGTGCTGCTTACCCAAACAAAAGGTGTTCGTCGGTTGCCTCCACAGGAAAAATCTCAAGGTATTTGAGAGGTTTTGCGCAGAGCAATTGTATGTTGAATTGAAGGTCCTTCTTTACCGAATTAAACCCCTATCTGGATTGGGAGTCCTTGACTTTGAACTCACCCCCCTTCGAGGCTTTATTCATCGCTGGCCGAGAATCCTAGTTGCACTAGGACTTCCTCGACCCTCTTTGTTTATCTGGACTACTCCTTCTTATGATAGGACTCGACCAACCCTGCTAAATGGCCCGGAATCAATCAGGCAGCCAATAGTATTTGACATAGCTTTGGGCCGAGCACAACCCTATACTCGGCCCAACAATATTATTTCGGGCCCAAACATTGCCCCCTCGCTTCTGAGAAACGGAACCATCTTTTGCTCTTTAGACTTCACTGTTCTTGATAACCATTACTATGCACATTTATGGGATATGATTGCACTATCCTCGTTACTCCCGACCATGGCCCTCGAAAACGTGCACCCACCGAAGCGTCTCTTCCTCATTAATGCATTAAAACCGCCGCCGCACGCAATCGTGCGTCCCGGATCCTTGAAAACCTTGATCCTATCCTTGCAGGTTCCCAAAATATCCGAAATGATTGGGGCCATTTCCCGGTTAAATTTCCCTCCAATTCAAACTCTAGTGCTTTCGAATACCAAACTTCTATCATTTGTATCCCACGCTTTCAGAGATTTTGAAATCTTCCTTTCGTCATTCCTGCTTGCTCAAACTACGCACCCTCAAGCTCATCTTTTCGAAATCCCCTTTTTAACCTATGCACTACTTTATTCCTTACCAATGGCCTCCTTCATCTCCAAGCTTTCCGACGAGTGCAATAAATGCAAGGACTTCATCGACCGGAGTGCCATCAAAATGCTGCGCTTCGAAAATGACCAGGCCCTGGCTAGCGGCCACTCCTTGGCGCTCAGCCCGGTCATCCTTGCCAATCTCTTCCAACGGACCCTCTGGGTATTCCAACTCTGGCTGCAGGTTTACTTCTCCACACTTCGGCCCGAAGTCCCCGCTTTCCAGCGTACCGCAGCGCTTGGTCTCCAACTGGCTTCTCGACTAGCGTCTTCTCACCGGGCTGACAAACTCCTCAAACACTTCTTCGGCCTAAACGTCCTCTTTGACGATGAGTTCCTGGTGTGCCGGGGTCAGGAATACCCCGCCTCGATCAGGCTTCCGACGGCAGCGTGGGCCAAGACCGAAGATGCTCGATCTTCGCCAGCATTGGGGTTCATTCGTATTGACCTGCGACCTTCCCTTGGTTGCGATGCCCGCCGAGCTAGTAAGGAGGTCTATCATCCCCATTTCGTCGCCCGGCAGCTCGGCTACCCCCAAGGTTGCCCCGTACCCCTGACAAGTGTAAAAAATTTCAGCTTCGACCGACCGTTCCTGAATCTCTGGGTACCGACACCTTTGGGGATTGATGGGACGAGTACACCCGTGACTTCTTCGGCGTCTCGACAAGCTTTTGCGGCCCAATCCAAGGAAACAACCCAAGGTACATTGTCCTTTCGTCTGTTGTACTTCAATTACTTGCCCCCTGTTACTGATTATTTCGTTATCTTAGGTGGTCGTGTGTTGAGAAGGGCGGAGGTGGTCGCCGCGGCAGTGGCCAAGAAACAATTGGTCCCCACGAAGAAGACCATTATTACAGGGCGAACGCCGTCGACCAAGTGCCCCCACCGAGACGCCGAGACGGGGGATGACGCTCCTCGCCCTTCCAAACGCGTCAAGAAGTTGGCGAAGAAAGGGGATCGAGAGATTCATGTTGTTCCCAGCGATACCACAGGAACGACTGCTCCTGCCGTTTCTCCTTCCATCCCGGCTGCCCCGGCTTCGACGGACCCCTTTCCTCCGGCCGTCCCCAAGACTGGGGTTATGGCCGATCCGGCCGCTGTACCAGCTGCAGCCTCGGAGCCGGCCATTGCGCCTGCCTTGAGGGTAAAGGCTGCGCCCGTCGAGGCATCCCCCGTCCAGCGACCGACGGTCATTCTGGAAGAGTTTCCTCAGGACGATGAGAGCGAGAGTAACGAGATCCCGCTGAAGCATCGCCCTCGACCAGCCAATTTTCCCCCTACCAATCCTTCCCCTCAGGCCGAGGCAGCCATCCAACGGGCTCCTCCTCTGGCCGATCGTGGGAAGAGACCCCTGGCCGAGCCTGAAGCGATGGCCAAGACACCGCTTCATCTGCAGGATGAAGACCTCAACATTCCTCCACAAGAAATGTCCTCGGACGCACCTGTACTTAAAAGAAATATTAAATGTCAGTTGCCCGAACGTTCATTTCACCGACAATTTTATGCGCCGACATGCGTTGTCTATATTTCCTGGCCACCATCGTGGCTATCAAATGTAGATAACTTCCATTGGCTGCGTGAATTGAGAAGCTGTCTTAGGCATTGGGCTCGACCATTAAGTTCTCTAGGTTTGAGCAATGAACCAGAAGGCATGGCCGAGGTCTCCTCCCGGCAGTCCCTTTGTTATGCATTTCCCATCTTTCCTTTTACTGACGTTTTATTTTCCTGTATAGCCTTCGTAGGAGGTCGAGCTCGACGCCTTGATTATGACGACCTCGGGGGCGGCAGGCTCTTCTACGCCTGCAACAAGAACTTTCGCATCCACGGCCAAACCGAATGCCCTCACCAAGCTCGCCAAGGCCTCGACTCGGTAGGAGCATATTTGAACGATCTTGCGGTTGATGAACGCACTCGGGAGTATTTCAACGTTTTCGAAAGAGCTCTCCGGGCCGAAGATGACCTGAAAGCCGCGATGGTCGCTCAAGAAGCTTTGCGTCCACGGGTCGATATGCTGAAAGCGATAAAAGATGCGCTGGGCGACCTTGACTGTCAAATTTCGGAACTTCAGAATCGTAGGTCGACAGTTGCTTCTAAGCTGGCGAGAGACTTCGAGTCGGGCGGCAAGTCCTGCCTGACTGAATATGCAGCTAGTGTGCGGCATGTTGAGCAGCTGAAGATGGATAAGAGGAATCGGTTGTTCTCGAAACTCTCATTCCCTCCTCACCTTAAAAGTGTTTTAGCAGTAAATAGGTCGATCATATGTACTTGTATGCTCATTTTTATGGGCTTGTTAATGGAACAGTCTATTCTTGCATTTCCCATTCCGATATCTGAGATGATATGCCCCCTTGCCGAGAACTTTGTGAACGATGAACGGTCCTTCCCATTTCGGCGACCATTTGCCGAACCTGGAGTCTTTAATCCCGACAGGCAACACCGTTTGCCAAACCAACTCTCCTTCACCGAACGTTTTTTGTCTAACGCGTTGATTATAAGCTTGCTCGACGATTTTCTTCTGTATTCGGCACTAAATGACATCCACAAACTACTCTGCTCGATCATTCGTAATGAGTTTATACTTAGCTCGACTGGCAACATAGCGTCCGGGGTGAAGTCCTGTATACCCATAATGCTTCGTTTAACTTTAAATGCCACATCCCAGGCCTCTCTCTTACCGTTTTCTCGAGAATGCCGATTAATACTTTATTACTTGCTTCGGCTTGCCTGTTTGCCTGCTTGCCGTGTATTCCCTAAACCTATCGGCCGTGAAGATTGTGCCATTGTCGATTATCGATCGTTTCTGGCACACCAAATCTGGTCACAATATTTTCCTCTACGAAATTGCAAACTTCCTTGTGAAGTAGTTGGTTGCTACTATTATCCACGCATGTTTTGTCGCCCCCAACGATGGCGTGATTTTGCCAATTACGTCCATTTAATTCGGTTGGGGCTCTCTGCACGGGTCCATGAATCTGGCACGGTACGCATCTCCGTGCATATTCAATGCAATCCTTTAATATACTTAGCCAAAAGTAACCGTGTCGTCGAAGCAACCAGCGCATTTTTCATCCTGATTGGTGAGCCCCACAAATTCCTTCATGTACCTCGGTCATCGCTTGGGCAGCTTCTTGTAGGCCAAGGCACAATAGTAGTAACCCGTCCTCGCCCTTTCGGTATAATTCATTTTGGTATGACACGTAATTCGTGGCGAGGACCTTCGTTCTCCGGTCGTGTTTCCCATCGGGGTTATCGAGGTATCGTAACATCATTTTTCTCCAATCGTCTGGTTATACCTCGACGACACATACTTGTACGGGGTTTCCCCGTTCTAGTAACGATGGTAGCGACATCACCCTTGTGCGCTGGGTATGATCGCAGAACTGTGGGTGTTACCCGGCTTAGCTTACCCCCCGTGAATTGTGCTCCGGAGGCGATTTGGGGGAGTTCGCTGCGTCCGTGTTCTGAATACGCGAAATATGGCGCCAAAGTACAACTCATGCAACGGAACACGTCGTTGAGTTGGTTAATCACAAGTTCAGAATCACCGAAGACGAGAACGCGGGATGCTCGTAAATCATGTAAAACGTGGAGGCCGATGATAAGAGCTTCATACTCGACCAGCGGTATTGTCAGGGTGACTGAATGGCAATACCAACACCAGTCGAGGTCGAAGTACTGGAACCATCGAAATTTCGACGTCGCTACCCCCAAAACCATAAGGAGAAGGGTGTTGGGCCAAAAAATCGGCAAGAGCTTGCCCTTTGACGGCCTTTTGGGGGACGTACTGAAGACTGAACTCGGATTACGCGAGCGTCTATTTCCCAATTCGGCCTTTGACGATAGGCCGAGTGAGCATGTAATGAACCACATTTGTTTGGGCAATGACCTGCGTAACATATGGGAGCATGTAGTGCTGAAAATTGAGCTCCGGCGAATTCAGATTACGGCTGAGATAAAAGATAGCTTGTTCACGCCTCACATTGTTATCTTGCGTGAGGAGACAACCAATGGATTCAGCTACTGCCGAAATGTACAGTTTAAGAGGTTTGCTGGGACGAGGTGTTCTTCGCGCCATTCAAACTTGTCGGAATCCTTAGGTTTGAGGAGCGTAGAGAAAGCCTTTATCTTGCCAACCAAATTGGCGATGAAACGGCGGAGAAAATTTATCTTCCCGAGCAATGACTGGAGCTGCTTCTTTGTTGTCGGGGGGTGGAGCGCTAATGATTGCGCGAGCTTTATTTTCGTCGACTTCAATGCTGCGATGGTGCACCAAAAACCCCAAGAAATTACCGACCGATACACCAAAAGCGCACCTGGCCGGGTTTATTTTGAGATTATTCTTGCGCATGCGAAGGAACGCTTGCCGCACATGGATCGATCGATCCAGGTGCATTTGGCGCGTATTCATGGCTCGTTGGTATATGGCGCCGGCGTTCTTGAGGTCAAATGGCATGACTACCTATTCGTACGTACCGAGTGCCCTTGGGCAGCGGAAGGCAGTCTTGTGGACGTCGACTTCAGCGATAAAGATCTGATCATAACCGCATCAATTAGCAAGTCTGAGATTGGCATTGTGTATTCATCCTTGGGAGTGGCCAGATTTAGATTGCGAAAATCGATGCAAATGCGGAGGGCTCCACTTTTCTTTAACATTGGGACGATATTGGCCAACCATTCGACGTACCGAACGGTCCTAATAAACCTGGCTTTTAGAAGCCGAACTAATTCGTCCTTGATGCCAAGTTGTACTTCGGTCGAGAACCGGCGTGGGGGTTGTCGAAAAGGCTTACACTCGTCCTTGATGCGTAACTCATGTTTTACAAGGTTTCGGTTAAGCAATTTACAAAGCTCGACCTTCATAGAAGGTGGTAGTAACGCACTGATAAACAATGGTCGAGGATCATTGGCTGTGCCAACATTGATTTCTTCCAATGGGTCCTTAACCTGGGGCCGATTGTCTTCGAGTTCGGCCGCTGCTTCGGCCAAAAATTTGATTAAGTTTCTGCCGGAATGGGGCTGCTTGGCAATGGCGTACCAATGGGCCAGCAGACATTCCATTGTCGACGAAACCGCGTTAATCTGCCAAGCCGAGTCTCGCCGAATCCTGTTGGACAGTCTCGGCACCTGCCTCGATAGCTTTTTGTACCGAAATTCTCGTCGGCCGTCCATCCTTGTTAAAACCCTGGAGGGTGATATAGCCAACGTGATCGTCATAATAGCGAGCCTGAATCATGTTGGTTTCAAATGGCTGATTATCAGCTGGGTGTACTACAACCGATTTGCCGTCCCAAAAGATGAGAACTTGGTATATATAGTCGGTCTTGGAGTCAATTATAAAGAATGCCGTCATGTGGTGACGATCGACTTGTCGCCGATGAAGCTGCTCATTGTTATTCCTGACGGGATAAGCTCGTCATCAGAACGGCATAAGATCGTCATGAAGGACATCGGCATAATGTTGACTGTGAACGGCTTTAGATTTTGGAGATTAACCGAGGGGGAACGGGGGAATAGTTTGGCCAAAGTTGCCTTAAGGTTGTCGTCGTTTCGGGCTTCCTCATTGTCGTCGTTTACGACAAAATACACTTGTGTTGCTTCTTCAGCAACTACGTCCCCATCCAAGAAATTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

2358

Amino Acids

265.57

Weight (kDa)

9.72

Isoelectric Point (pI)

50.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 23, 3932, 6774
AarI CACCTGC 1 cut(s) 6572
AatII GACGTC 2 cut(s) 5139, 5952
Acc16I TGCGCA 3 cut(s) 136, 670, 5784
Acc36I ACCTGC 5 cut(s) 1198, 1612, 1896, 5334, 6572
Acc65I GGTACC 1 cut(s) 2044
AccB1I GGYRCC 4 cut(s) 2044, 4919, 5864, 6560
AccB7I CCANNNNNTGG 2 cut(s) 1534, 1552
AccI GTMKAC 7 cut(s) 310, 2309, 3518, 4060, 5685, 5952, 6501
AccIII TCCGGA 1 cut(s) 4864
AclI AACGTT 3 cut(s) 2920, 3366, 3907
AclWI GGATC 9 cut(s) 1173, 1186, 1189, 2403, 2522, 2671, 5815, 5820, 6346
AcuI CTGAAG 9 cut(s) 294, 578, 2705, 2823, 3488, 3632, 5246, 5941, 7023
AcyI GRCGYC 8 cut(s) 453, 2096, 2331, 3196, 4920, 5136, 5865, 5949
AfeI AGCGCT 2 cut(s) 1677, 5656
AflII CTTAAG 1 cut(s) 6970
AflIII ACRYGT 4 cut(s) 2368, 3921, 4634, 4947
AhdI GACNNNNNGTC 2 cut(s) 2627, 3550
AjiI CACGTC 2 cut(s) 320, 4950
AjuI GAANNNNNNNTTGG 4 cut(s) 6172, 6204, 6346, 6378
AleI CACNNNNGTG 2 cut(s) 2980, 4795
AloI GAACNNNNNNTCC 6 cut(s) 2425, 2457, 3804, 3836, 5485, 5517
Alw21I GWGCWC 8 cut(s) 567, 931, 1113, 3193, 3382, 4864, 5367, 5709
Alw44I GTGCAC 2 cut(s) 1109, 5705
AlwI GGATC 9 cut(s) 1173, 1186, 1189, 2403, 2522, 2671, 5815, 5820, 6346
AlwNI CAGNNNCTG 2 cut(s) 1534, 5460
Ama87I CYCGRG 4 cut(s) 3215, 3351, 4122, 5611
Aor13HI TCCGGA 1 cut(s) 4864
Aor51HI AGCGCT 2 cut(s) 1677, 5656
ApaI GGGCCC 1 cut(s) 968
ApaLI GTGCAC 2 cut(s) 1109, 5705
ArsI GACNNNNNNTTYG 8 cut(s) 3837, 3869, 4624, 4656, 5885, 5917, 6580, 6612
AseI ATTAAT 2 cut(s) 1137, 4136
Asp700I GAANNNNTTC 3 cut(s) 248, 2643, 6163
Asp718I GGTACC 1 cut(s) 2044
AsuII TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
AsuNHI GCTAGC 1 cut(s) 1538
AvaI CYCGRG 4 cut(s) 3215, 3351, 4122, 5611
AvaII GGWCC 9 cut(s) 697, 1593, 2269, 2485, 3816, 4402, 4652, 6130, 6375
AxyI CCTNAGG 3 cut(s) 2649, 2733, 5533
BaeGI GKGCMC 5 cut(s) 968, 1113, 2321, 5709, 5921
BalI TGGCCA 6 cut(s) 2255, 2813, 2974, 6035, 6107, 6959
BamHI GGATCC 1 cut(s) 1178
BanI GGYRCC 4 cut(s) 2044, 4919, 5864, 6560
BanII GRGCYC 9 cut(s) 968, 2761, 3049, 3193, 3382, 4392, 4524, 5367, 6076
BbsI GAAGAC 7 cut(s) 282, 1701, 2288, 2847, 4994, 5234, 6390
Bbv12I GWGCWC 8 cut(s) 567, 931, 1113, 3193, 3382, 4864, 5367, 5709
BciVI GTATCC 1 cut(s) 1318
BclI TGATCA 1 cut(s) 5973
BfmI CTRYAG 3 cut(s) 1619, 2547, 2831
BfoI RGCGCY 5 cut(s) 1559, 1679, 4923, 5658, 5868
BfrI CTTAAG 1 cut(s) 6970
BfuAI ACCTGC 5 cut(s) 1198, 1612, 1896, 5334, 6572
BfuI GTATCC 1 cut(s) 1318
BglI GCCNNNNNGGC 1 cut(s) 2531
BglII AGATCT 1 cut(s) 5968
BlpI GCTNAGC 2 cut(s) 1559, 4838
BmcAI AGTACT 1 cut(s) 5114
Bme18I GGWCC 9 cut(s) 697, 1593, 2269, 2485, 3816, 4402, 4652, 6130, 6375
BmeRI GACNNNNNGTC 2 cut(s) 2627, 3550
BmeT110I CYCGRG 4 cut(s) 3215, 3351, 4122, 5611
BmgBI CACGTC 2 cut(s) 320, 4950
BmrI ACTGGG 1 cut(s) 2523
BmtI GCTAGC 1 cut(s) 1542
BmuI ACTGGG 1 cut(s) 2523
BoxI GACNNNNGTC 1 cut(s) 1705
BpiI GAAGAC 7 cut(s) 282, 1701, 2288, 2847, 4994, 5234, 6390
BplI GAGNNNNNCTC 2 cut(s) 3089, 3121
BpmI CTGGAG 3 cut(s) 3870, 5644, 6644
Bpu1102I GCTNAGC 2 cut(s) 1559, 4838
Bpu14I TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
BpuEI CTTGAG 6 cut(s) 463, 632, 1359, 2599, 3405, 5897
Bsa29I ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
BsaAI YACGTR 2 cut(s) 4637, 5909
BsaBI GATNNNNATC 1 cut(s) 5967
BsaHI GRCGYC 8 cut(s) 453, 2096, 2331, 3196, 4920, 5136, 5865, 5949
BsaI GGTCTC 3 cut(s) 1688, 2779, 3106
BsaWI WCCGGW 3 cut(s) 1491, 4664, 4864
BsaXI ACNNNNNCTCC 4 cut(s) 2425, 2455, 3878, 3908
Bse118I RCCGGY 3 cut(s) 2560, 5867, 6201
Bse1I ACTGG 7 cut(s) 523, 1695, 2518, 4033, 5098, 5120, 5627
Bse21I CCTNAGG 3 cut(s) 2649, 2733, 5533
Bse3DI GCAATG 6 cut(s) 972, 2565, 3082, 5326, 5623, 6471
Bse8I GATNNNNATC 1 cut(s) 5967
BseAI TCCGGA 1 cut(s) 4864
BseCI ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
BseJI GATNNNNATC 1 cut(s) 5967
BseMI GCAATG 6 cut(s) 972, 2565, 3082, 5326, 5623, 6471
BseMII CTCAG 7 cut(s) 980, 1573, 2663, 2747, 3762, 5379, 5991
BseNI ACTGG 7 cut(s) 523, 1695, 2518, 4033, 5098, 5120, 5627
BseRI GAGGAG 9 cut(s) 557, 1721, 2343, 2751, 2754, 3094, 3648, 5450, 5557
BseSI GKGCMC 5 cut(s) 968, 1113, 2321, 5709, 5921
BseX3I CGGCCG 6 cut(s) 501, 2499, 2532, 4201, 6408, 6599
BseYI CCCAGC 5 cut(s) 2417, 3472, 4802, 5489, 6699
BsgI GTGCAG 1 cut(s) 4380
BshNI GGYRCC 4 cut(s) 2044, 4919, 5864, 6560
BshVI ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
BsiHKAI GWGCWC 8 cut(s) 567, 931, 1113, 3193, 3382, 4864, 5367, 5709
BsiHKCI CYCGRG 4 cut(s) 3215, 3351, 4122, 5611
BsiWI CGTACG 1 cut(s) 5905
BsmBI CGTCTC 4 cut(s) 1130, 2103, 2322, 2330
BsmI GAATGC 4 cut(s) 407, 3281, 4133, 6785
Bso31I GGTCTC 3 cut(s) 1688, 2779, 3106
BsoBI CYCGRG 4 cut(s) 3215, 3351, 4122, 5611
Bsp119I TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
Bsp120I GGGCCC 1 cut(s) 964
Bsp13I TCCGGA 1 cut(s) 4864
Bsp1407I TGTACA 1 cut(s) 5470
Bsp1720I GCTNAGC 2 cut(s) 1559, 4838
Bsp19I CCATGG 1 cut(s) 1092
BspCNI CTCAG 7 cut(s) 981, 1572, 2662, 2746, 3763, 5380, 5992
BspDI ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
BspEI TCCGGA 1 cut(s) 4864
BspHI TCATGA 1 cut(s) 6876
BspMAI CTGCAG 3 cut(s) 1623, 2551, 2835
BspMI ACCTGC 5 cut(s) 1198, 1612, 1896, 5334, 6572
BspOI GCTAGC 1 cut(s) 1542
BspPI GGATC 9 cut(s) 1173, 1186, 1189, 2403, 2522, 2671, 5815, 5820, 6346
BspQI GCTCTTC 1 cut(s) 3236
BspT104I TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
BspT107I GGYRCC 4 cut(s) 2044, 4919, 5864, 6560
BspTI CTTAAG 1 cut(s) 6970
BspTNI GGTCTC 3 cut(s) 1688, 2779, 3106
BsrDI GCAATG 6 cut(s) 972, 2565, 3082, 5326, 5623, 6471
BsrFI RCCGGY 3 cut(s) 2560, 5867, 6201
BsrGI TGTACA 1 cut(s) 5470
BsrI ACTGG 7 cut(s) 523, 1695, 2518, 4033, 5098, 5120, 5627
BssAI RCCGGY 3 cut(s) 2560, 5867, 6201
BssNAI GTATAC 1 cut(s) 4061
BssNI GRCGYC 8 cut(s) 453, 2096, 2331, 3196, 4920, 5136, 5865, 5949
Bst1107I GTATAC 1 cut(s) 4061
Bst6I CTCTTC 5 cut(s) 1133, 1589, 2634, 2777, 3236
BstACI GRCGYC 8 cut(s) 453, 2096, 2331, 3196, 4920, 5136, 5865, 5949
BstAFI CTTAAG 1 cut(s) 6970
BstAPI GCANNNNNTGC 3 cut(s) 1473, 3567, 5350
BstAUI TGTACA 1 cut(s) 5470
BstBAI YACGTR 2 cut(s) 4637, 5909
BstBI TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
BstDSI CCRYGG 4 cut(s) 1092, 2244, 3262, 3437
BstENI CCTNNNNNAGG 2 cut(s) 54, 1810
BstH2I RGCGCY 5 cut(s) 1559, 1679, 4923, 5658, 5868
BstNSI RCATGY 6 cut(s) 2955, 3602, 4330, 5297, 5348, 5789
BstPAI GACNNNNGTC 1 cut(s) 1705
BstSFI CTRYAG 3 cut(s) 1619, 2547, 2831
BstSLI GKGCMC 5 cut(s) 968, 1113, 2321, 5709, 5921
BstSNI TACGTA 1 cut(s) 5909
BstV2I GAAGAC 7 cut(s) 282, 1701, 2288, 2847, 4994, 5234, 6390
BstX2I RGATCY 3 cut(s) 1178, 2676, 5968
BstXI CCANNNNNNTGG 3 cut(s) 2982, 4412, 4723
BstYI RGATCY 3 cut(s) 1178, 2676, 5968
BstZ17I GTATAC 1 cut(s) 4061
BstZI CGGCCG 6 cut(s) 501, 2499, 2532, 4201, 6408, 6599
Bsu15I ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
Bsu36I CCTNAGG 3 cut(s) 2649, 2733, 5533
BsuI GTATCC 1 cut(s) 1318
BsuTUI ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
BtgI CCRYGG 4 cut(s) 1092, 2244, 3262, 3437
BtgZI GCGATG 8 cut(s) 761, 1923, 2675, 2822, 3425, 4536, 5597, 5714
BtrI CACGTC 2 cut(s) 320, 4950
BtsI GCAGTG 2 cut(s) 545, 2256
BtsIMutI CAGTG 5 cut(s) 545, 599, 1023, 2256, 6317
BveI ACCTGC 5 cut(s) 1198, 1612, 1896, 5334, 6572
CaiI CAGNNNCTG 2 cut(s) 1534, 5460
CciI TCATGA 1 cut(s) 6876
Cfr10I RCCGGY 3 cut(s) 2560, 5867, 6201
Cfr42I CCGCGG 1 cut(s) 2247
ClaI ATCGAT 4 cut(s) 4231, 5815, 5819, 6056
DinI GGCGCC 2 cut(s) 4921, 5866
DraI TTTAAA 1 cut(s) 4086
DriI GACNNNNNGTC 2 cut(s) 2627, 3550
EagI CGGCCG 6 cut(s) 501, 2499, 2532, 4201, 6408, 6599
Eam1104I CTCTTC 5 cut(s) 1133, 1589, 2634, 2777, 3236
Eam1105I GACNNNNNGTC 2 cut(s) 2627, 3550
EarI CTCTTC 5 cut(s) 1133, 1589, 2634, 2777, 3236
EciI GGCGGA 2 cut(s) 2246, 5608
Ecl136II GAGCTC 3 cut(s) 3191, 3380, 5365
EclXI CGGCCG 6 cut(s) 501, 2499, 2532, 4201, 6408, 6599
Eco105I TACGTA 1 cut(s) 5909
Eco147I AGGCCT 2 cut(s) 3300, 4103
Eco24I GRGCYC 9 cut(s) 968, 2761, 3049, 3193, 3382, 4392, 4524, 5367, 6076
Eco31I GGTCTC 3 cut(s) 1688, 2779, 3106
Eco32I GATATC 1 cut(s) 3768
Eco47I GGWCC 9 cut(s) 697, 1593, 2269, 2485, 3816, 4402, 4652, 6130, 6375
Eco47III AGCGCT 2 cut(s) 1677, 5656
Eco52I CGGCCG 6 cut(s) 501, 2499, 2532, 4201, 6408, 6599
Eco53kI GAGCTC 3 cut(s) 3191, 3380, 5365
Eco57I CTGAAG 9 cut(s) 294, 578, 2705, 2823, 3488, 3632, 5246, 5941, 7023
Eco81I CCTNAGG 3 cut(s) 2649, 2733, 5533
Eco88I CYCGRG 4 cut(s) 3215, 3351, 4122, 5611
EcoICRI GAGCTC 3 cut(s) 3191, 3380, 5365
EcoNI CCTNNNNNAGG 2 cut(s) 54, 1810
EcoO109I RGGNCCY 4 cut(s) 697, 1531, 4652, 6375
EcoRI GAATTC 1 cut(s) 5373
EcoRV GATATC 1 cut(s) 3768
EcoT22I ATGCAT 2 cut(s) 1144, 3130
EcoT38I GRGCYC 9 cut(s) 968, 2761, 3049, 3193, 3382, 4392, 4524, 5367, 6076
EgeI GGCGCC 2 cut(s) 4921, 5866
EheI GGCGCC 2 cut(s) 4921, 5866
Esp3I CGTCTC 4 cut(s) 1130, 2103, 2322, 2330
FauI CCCGC 5 cut(s) 1663, 1810, 1922, 2688, 4992
FauNDI CATATG 2 cut(s) 3698, 5336
FbaI TGATCA 1 cut(s) 5973
FblI GTMKAC 7 cut(s) 310, 2309, 3518, 4060, 5685, 5952, 6501
FriOI GRGCYC 9 cut(s) 968, 2761, 3049, 3193, 3382, 4392, 4524, 5367, 6076
FspI TGCGCA 3 cut(s) 136, 670, 5784
GsaI CCCAGC 5 cut(s) 2421, 3476, 4806, 5493, 6703
GsuI CTGGAG 3 cut(s) 3870, 5644, 6644
HaeII RGCGCY 5 cut(s) 1559, 1679, 4923, 5658, 5868
Hin1I GRCGYC 8 cut(s) 453, 2096, 2331, 3196, 4920, 5136, 5865, 5949
HincII GTYRAC 7 cut(s) 105, 2310, 3519, 5686, 5953, 6502, 6900
HindII GTYRAC 7 cut(s) 105, 2310, 3519, 5686, 5953, 6502, 6900
HindIII AAGCTT 4 cut(s) 1451, 2106, 3426, 3934
Hsp92I GRCGYC 8 cut(s) 453, 2096, 2331, 3196, 4920, 5136, 5865, 5949
KasI GGCGCC 2 cut(s) 4919, 5864
Kpn2I TCCGGA 1 cut(s) 4864
KpnI GGTACC 1 cut(s) 2048
KroI GCCGGC 2 cut(s) 2560, 5867
KroNI GCCGGC 2 cut(s) 2562, 5869
Ksp22I TGATCA 1 cut(s) 5973
KspI CCGCGG 1 cut(s) 2247
LguI GCTCTTC 1 cut(s) 3236
MfeI CAATTG 2 cut(s) 677, 2264
MflI RGATCY 3 cut(s) 1178, 2676, 5968
MlsI TGGCCA 6 cut(s) 2255, 2813, 2974, 6035, 6107, 6959
MluI ACGCGT 2 cut(s) 2368, 3921
MluNI TGGCCA 6 cut(s) 2255, 2813, 2974, 6035, 6107, 6959
Mly113I GGCGCC 2 cut(s) 4920, 5865
MlyI GAGTC 7 cut(s) 744, 850, 3299, 3560, 3861, 6539, 6774
MmeI TCCRAC 8 cut(s) 1482, 1612, 1633, 1711, 1844, 2776, 5505, 6528
Mox20I TGGCCA 6 cut(s) 2255, 2813, 2974, 6035, 6107, 6959
Mph1103I ATGCAT 2 cut(s) 1144, 3130
MreI CGCCGGCG 1 cut(s) 5867
MroI TCCGGA 1 cut(s) 4864
MroNI GCCGGC 2 cut(s) 2560, 5867
MroXI GAANNNNTTC 3 cut(s) 248, 2643, 6163
MscI TGGCCA 6 cut(s) 2255, 2813, 2974, 6035, 6107, 6959
MslI CAYNNNNRTG 7 cut(s) 1044, 1054, 1505, 2980, 3719, 4430, 4795
Msp20I TGGCCA 6 cut(s) 2255, 2813, 2974, 6035, 6107, 6959
MspA1I CMGCKG 9 cut(s) 2246, 2537, 2546, 2683, 3610, 5061, 5930, 6413, 6699
MspCI CTTAAG 1 cut(s) 6970
MunI CAATTG 2 cut(s) 677, 2264
Mva1269I GAATGC 4 cut(s) 407, 3281, 4133, 6785
NaeI GCCGGC 2 cut(s) 2562, 5869
NarI GGCGCC 2 cut(s) 4920, 5865
NcoI CCATGG 1 cut(s) 1092
NdeI CATATG 2 cut(s) 3698, 5336
NgoMIV GCCGGC 2 cut(s) 2560, 5867
NheI GCTAGC 1 cut(s) 1538
NmuCI GTSAC 4 cut(s) 2083, 4257, 5074, 6793
NsbI TGCGCA 3 cut(s) 136, 670, 5784
NsiI ATGCAT 2 cut(s) 1144, 3130
NspI RCATGY 6 cut(s) 2955, 3602, 4330, 5297, 5348, 5789
NspV TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
OliI CACNNNNGTG 2 cut(s) 2980, 4795
PaeI GCATGC 1 cut(s) 5789
PaeR7I CTCGAG 1 cut(s) 4122
PagI TCATGA 1 cut(s) 6876
PaqCI CACCTGC 1 cut(s) 6572
PceI AGGCCT 2 cut(s) 3300, 4103
PciSI GCTCTTC 1 cut(s) 3236
PctI GAATGC 4 cut(s) 407, 3281, 4133, 6785
PdiI GCCGGC 2 cut(s) 2562, 5869
PdmI GAANNNNTTC 3 cut(s) 248, 2643, 6163
Pfl23II CGTACG 1 cut(s) 5905
PflMI CCANNNNNTGG 2 cut(s) 1534, 1552
PfoI TCCNGGA 1 cut(s) 1174
Ple19I CGATCG 4 cut(s) 2776, 4235, 5819, 6801
PleI GAGTC 7 cut(s) 743, 850, 3299, 3559, 3860, 6538, 6773
PluTI GGCGCC 2 cut(s) 4923, 5868
PpsI GAGTC 7 cut(s) 743, 850, 3299, 3559, 3860, 6538, 6773
Ppu21I YACGTR 2 cut(s) 4637, 5909
PpuMI RGGWCCY 3 cut(s) 697, 4652, 6375
PshAI GACNNNNGTC 1 cut(s) 1705
PshBI ATTAAT 2 cut(s) 1137, 4136
PsiI TTATAA 3 cut(s) 23, 3932, 6774
Psp124BI GAGCTC 3 cut(s) 3193, 3382, 5367
Psp1406I AACGTT 3 cut(s) 2920, 3366, 3907
Psp5II RGGWCCY 3 cut(s) 697, 4652, 6375
PspFI CCCAGC 5 cut(s) 2417, 3472, 4802, 5489, 6699
PspLI CGTACG 1 cut(s) 5905
PspOMI GGGCCC 1 cut(s) 964
PspPPI RGGWCCY 3 cut(s) 697, 4652, 6375
PsrI GAACNNNNNNTAC 2 cut(s) 5226, 5258
PstI CTGCAG 3 cut(s) 1623, 2551, 2835
PstNI CAGNNNCTG 2 cut(s) 1534, 5460
PsuI RGATCY 3 cut(s) 1178, 2676, 5968
PvuI CGATCG 4 cut(s) 2776, 4235, 5819, 6801
PvuII CAGCTG 3 cut(s) 2546, 3610, 6699
RseI CAYNNNNRTG 7 cut(s) 1044, 1054, 1505, 2980, 3719, 4430, 4795
SacI GAGCTC 3 cut(s) 3193, 3382, 5367
SacII CCGCGG 1 cut(s) 2247
SalI GTCGAC 5 cut(s) 2308, 3517, 5684, 5951, 6500
SapI GCTCTTC 1 cut(s) 3236
ScaI AGTACT 1 cut(s) 5114
SchI GAGTC 7 cut(s) 744, 850, 3299, 3560, 3861, 6539, 6774
SfcI CTRYAG 3 cut(s) 1619, 2547, 2831
SfiI GGCCNNNNNGGCC 1 cut(s) 2531
SfoI GGCGCC 2 cut(s) 4921, 5866
Sfr274I CTCGAG 1 cut(s) 4122
Sfr303I CCGCGG 1 cut(s) 2247
SfuI TTCGAA 5 cut(s) 487, 1283, 1389, 1518, 3372
SgrAI CRCCGGYG 1 cut(s) 5867
SgrBI CCGCGG 1 cut(s) 2247
SinI GGWCC 9 cut(s) 697, 1593, 2269, 2485, 3816, 4402, 4652, 6130, 6375
SlaI CTCGAG 1 cut(s) 4122
SmiMI CAYNNNNRTG 7 cut(s) 1044, 1054, 1505, 2980, 3719, 4430, 4795
SmlI CTYRAG 8 cut(s) 478, 647, 1374, 2578, 3420, 4122, 5876, 6970
SmoI CTYRAG 8 cut(s) 478, 647, 1374, 2578, 3420, 4122, 5876, 6970
SnaBI TACGTA 1 cut(s) 5909
SphI GCATGC 1 cut(s) 5789
SseBI AGGCCT 2 cut(s) 3300, 4103
SspDI GGCGCC 2 cut(s) 4919, 5864
SspI AATATT 5 cut(s) 69, 353, 955, 2899, 4265
SstI GAGCTC 3 cut(s) 3193, 3382, 5367
StuI AGGCCT 2 cut(s) 3300, 4103
TaqII GACCGA 9 cut(s) 249, 560, 1856, 2037, 2638, 4536, 5748, 6181, 6746
TatI WGTACW 9 cut(s) 2075, 2163, 2884, 3701, 4927, 5112, 5470, 6185, 6705
TscAI CASTG 5 cut(s) 545, 599, 1030, 2256, 6324
TseFI GTSAC 4 cut(s) 2083, 4257, 5074, 6793
Tsp45I GTSAC 4 cut(s) 2083, 4257, 5074, 6793
TspGWI ACGGA 7 cut(s) 357, 1011, 1606, 2498, 4420, 4884, 4957
TspRI CASTG 5 cut(s) 545, 599, 1030, 2256, 6324
Van91I CCANNNNNTGG 2 cut(s) 1534, 1552
Vha464I CTTAAG 1 cut(s) 6970
VneI GTGCAC 2 cut(s) 1109, 5705
VpaK11BI GGWCC 9 cut(s) 697, 1593, 2269, 2485, 3816, 4402, 4652, 6130, 6375
VspI ATTAAT 2 cut(s) 1137, 4136
XagI CCTNNNNNAGG 2 cut(s) 54, 1810
XbaI TCTAGA 1 cut(s) 265
XceI RCATGY 6 cut(s) 2955, 3602, 4330, 5297, 5348, 5789
XcmI CCANNNNNNNNNTGG 1 cut(s) 2263
XhoI CTCGAG 1 cut(s) 4122
XmiI GTMKAC 7 cut(s) 310, 2309, 3518, 4060, 5685, 5952, 6501
XmnI GAANNNNTTC 3 cut(s) 248, 2643, 6163
ZraI GACGTC 2 cut(s) 5137, 5950
ZrmI AGTACT 1 cut(s) 5114
Zsp2I ATGCAT 2 cut(s) 1144, 3130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.