pycom12g19320

Kelch motif

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
21200738 .. 21203014
2277 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g19320.4

Sequence Viewer

Length: 1383 bp
ATGGGGAAGAAGCTTCTTGTGTATGGTGGGGACCGTGGTGATAGGTATTATGGTGGTGTAGATGTGCTTGACATGAACACACTGACTTGGTCGAGGTTGGCTGTTCAAGGATCATCACCGGGTGCCAGGGCAGGTCATGCAACTGTTAGTATCGGGACAAAGGTTTATGTCATTGGAGGGGTTGGAGACAAACATTATTACAACGATGTTTGGGTCCTAGATGTGATTACTTGTTCATGGACTCAACTTGAAATATGTGGCCAACATCCACAAGGACGGTTCTCTCATACTGCTGTTGTTACAGATTCTGATATTGCCGTCTACGGAGGGTGTGGTGAGGACGAGCGCCCTCTGAATGAGTTGTTGGTGTTGCATCTTGGAGCAGAACATCTCAATGGTCGTTACAATGTTTCCATGTGCAAAATTTTTGGAAGCCACTGGAACCAAGAGAGGCGGAGGATCTCAAAGGGAACAGATTTTAACACGAAAACTATGCTAATGGGGAATCATGTAGTAGTACGACAGACAACCCACGGACCAGAATCAGAAGCAAGACGGTCTCTTCAGTTCAAATCAGATACTTTACATCCAAAGAGGAGAAGAACCGCAAGTACAAAATCAATAGACCTCGAATCAGAACAAGAGGAGCATTCTCTATCACTCTCCCAGCATTCATCACCATCACACTCAGATCAAGAGCAGATCCCGAATCCTAATATGGTTGATTCCAACCCAGGTTCTCGAGGTTTTCATTTGTTTAAGAAATTCAATCATAGTCCGAGCAATGGTCAATCTCCCAATGTCACAAGCAGCCATAAAGCTAATAGAAATTCTGGACAAAGATCTCCAGACCTTAACTTGTTAGGAGAGTGTCACACCGAACCAAAACGAGAACAGTATCATCATGTCAACATTGGTAGACCAAGTGTGCAATTTCAAGCAGTAGAACAAAAACACTTCGAGGCAGGGTCTATTCAGAACATGATGGGTGCTGAGGTTCAAGGCAAAGTTGATGGAGCATTCGACTCAGGTTTCCTAATGACTGCGATGGTTAATGGAAAGATATATAGAGGAGTCTTATTTGCACCAATGATCTCAAGACGGCCAGCTTTCGTGCAAAATCCTTCGTCTTCAACAAGCCAAATTCCCATTTCTGGAGCAAAACCATTTCCAAACTCGAATCATCCAGAGCCACCCTTGAAGCTATCTGAGCAACCAATGAGGAATTCCATGCCGGAGTCTGGCCTGGGCCTCGTGCAACCTCAGGTTGCTCGACCATTTTCGGTCATTCGAGCCAATCCATCTGTAGCCAAAGAAAGAAGTGATCTTCCTGGTGTGTTTTTAACACTTGGGGGACCAGGAAGTCCACCTGGTGGATCTTAG

Protein Analysis

461

Amino Acids

50.37

Weight (kDa)

8.97

Isoelectric Point (pI)

46.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1362
Acc36I ACCTGC 1 cut(s) 122
AccB1I GGYRCC 1 cut(s) 122
AccB7I CCANNNNNTGG 1 cut(s) 1373
AccI GTMKAC 2 cut(s) 321, 919
AciI CCGC 2 cut(s) 454, 606
AclWI GGATC 3 cut(s) 118, 467, 697
AcoI YGGCCR 2 cut(s) 259, 1103
AcsI RAATTY 5 cut(s) 423, 764, 829, 1143, 1225
AcuI CTGAAG 1 cut(s) 548
AdeI CACNNNGTG 2 cut(s) 122, 1373
AfaI GTAC 2 cut(s) 519, 613
AfiI CCNNNNNNNGG 4 cut(s) 785, 1154, 1241, 1373
AgsI TTSAA 8 cut(s) 107, 251, 571, 769, 938, 1001, 1134, 1201
AjnI CCWGG 6 cut(s) 125, 733, 1245, 1330, 1357, 1369
AjuI GAANNNNNNNTTGG 4 cut(s) 347, 379, 1210, 1242
AluBI AGCT 4 cut(s) 13, 821, 1109, 1204
AluI AGCT 4 cut(s) 13, 821, 1109, 1204
Alw26I GTCTC 2 cut(s) 180, 564
AlwI GGATC 3 cut(s) 118, 467, 697
AlwNI CAGNNNCTG 1 cut(s) 308
Ama87I CYCGRG 1 cut(s) 741
AoxI GGCC 4 cut(s) 259, 1103, 1243, 1249
ApeKI GCWGC 1 cut(s) 810
ApoI RAATTY 5 cut(s) 423, 764, 829, 1143, 1225
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 5 cut(s) 31, 214, 536, 1249, 1355
AsuC2I CCSGG 1 cut(s) 120
AsuHPI GGTGA 4 cut(s) 50, 108, 347, 669
AvaI CYCGRG 1 cut(s) 741
AvaII GGWCC 4 cut(s) 31, 214, 536, 1355
AxyI CCTNAGG 1 cut(s) 1263
BalI TGGCCA 1 cut(s) 261
BanI GGYRCC 1 cut(s) 122
BauI CACGAG 1 cut(s) 1253
BbsI GAAGAC 1 cut(s) 1122
BbvCI CCTCAGC 1 cut(s) 993
BbvI GCAGC 1 cut(s) 822
BccI CCATC 5 cut(s) 688, 979, 1007, 1042, 1309
BceAI ACGGC 2 cut(s) 302, 1118
BcgI CGANNNNNNTGC 2 cut(s) 475, 509
BciT130I CCWGG 6 cut(s) 127, 735, 1247, 1332, 1359, 1371
BcnI CCSGG 1 cut(s) 120
BcoDI GTCTC 2 cut(s) 180, 564
BfaI CTAG 1 cut(s) 218
BfmI CTRYAG 1 cut(s) 1305
BfoI RGCGCY 1 cut(s) 349
BfuAI ACCTGC 1 cut(s) 122
BglII AGATCT 1 cut(s) 842
BisI GCNGC 1 cut(s) 811
BlsI GCNGC 1 cut(s) 812
Bme1390I CCNGG 7 cut(s) 120, 127, 735, 1247, 1332, 1359, 1371
Bme18I GGWCC 4 cut(s) 31, 214, 536, 1355
BmeT110I CYCGRG 1 cut(s) 741
BmgT120I GGNCC 5 cut(s) 31, 214, 536, 1249, 1355
BmiI GGNNCC 5 cut(s) 32, 124, 215, 443, 1356
BmrFI CCNGG 7 cut(s) 120, 127, 735, 1247, 1332, 1359, 1371
BmsI GCATC 1 cut(s) 382
BpiI GAAGAC 1 cut(s) 1122
BpmI CTGGAG 2 cut(s) 831, 1176
Bpu10I CCTNAGC 1 cut(s) 993
BpuEI CTTGAG 1 cut(s) 1081
BpuMI CCSGG 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 5 cut(s) 34, 126, 532, 733, 1246
Bsc4I CCNNNNNNNGG 4 cut(s) 785, 1154, 1241, 1373
Bse1I ACTGG 1 cut(s) 443
Bse21I CCTNAGG 1 cut(s) 1263
Bse3DI GCAATG 1 cut(s) 790
BseBI CCWGG 6 cut(s) 127, 735, 1247, 1332, 1359, 1371
BseDI CCNNGG 5 cut(s) 34, 126, 532, 733, 1246
BseGI GGATG 3 cut(s) 265, 586, 1183
BseLI CCNNNNNNNGG 4 cut(s) 785, 1154, 1241, 1373
BseMI GCAATG 1 cut(s) 790
BseMII CTCAG 5 cut(s) 702, 984, 1041, 1200, 1277
BseNI ACTGG 1 cut(s) 443
BseRI GAGGAG 3 cut(s) 610, 659, 1086
BseXI GCAGC 1 cut(s) 822
BseYI CCCAGC 1 cut(s) 666
BshFI GGCC 4 cut(s) 261, 1105, 1245, 1251
BshNI GGYRCC 1 cut(s) 122
BsiHKCI CYCGRG 1 cut(s) 741
BsiSI CCGG 2 cut(s) 119, 1235
BslFI GGGAC 3 cut(s) 44, 169, 1368
BslI CCNNNNNNNGG 4 cut(s) 785, 1154, 1241, 1373
BsmAI GTCTC 2 cut(s) 180, 564
BsmFI GGGAC 3 cut(s) 44, 169, 1368
BsmI GAATGC 3 cut(s) 649, 670, 1019
BsnI GGCC 4 cut(s) 261, 1105, 1245, 1251
Bso31I GGTCTC 1 cut(s) 564
BsoBI CYCGRG 1 cut(s) 741
Bsp143I GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
BspACI CCGC 2 cut(s) 454, 606
BspANI GGCC 4 cut(s) 261, 1105, 1245, 1251
BspCNI CTCAG 5 cut(s) 701, 985, 1040, 1201, 1276
BspLI GGNNCC 5 cut(s) 32, 124, 215, 443, 1356
BspMI ACCTGC 1 cut(s) 122
BspPI GGATC 3 cut(s) 118, 467, 697
BspT107I GGYRCC 1 cut(s) 122
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 1 cut(s) 790
BsrI ACTGG 1 cut(s) 443
BssECI CCNNGG 5 cut(s) 34, 126, 532, 733, 1246
BssMI GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
BssSI CACGAG 1 cut(s) 1253
Bst2BI CACGAG 1 cut(s) 1253
Bst2UI CCWGG 6 cut(s) 127, 735, 1247, 1332, 1359, 1371
Bst4CI ACNGT 5 cut(s) 35, 145, 279, 558, 897
Bst6I CTCTTC 1 cut(s) 567
BstAPI GCANNNNNTGC 1 cut(s) 137
BstC8I GCNNGC 1 cut(s) 1107
BstDEI CTNAG 6 cut(s) 688, 993, 1027, 1209, 1263, 1380
BstDSI CCRYGG 2 cut(s) 34, 532
BstF5I GGATG 3 cut(s) 265, 586, 1183
BstH2I RGCGCY 1 cut(s) 349
BstHHI GCGC 1 cut(s) 348
BstKTI GATC 8 cut(s) 113, 462, 694, 705, 845, 1095, 1327, 1379
BstMAI GTCTC 2 cut(s) 180, 564
BstMBI GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
BstMWI GCNNNNNNNGC 2 cut(s) 137, 1210
BstNI CCWGG 6 cut(s) 127, 735, 1247, 1332, 1359, 1371
BstSCI CCNGG 7 cut(s) 118, 125, 733, 1245, 1330, 1357, 1369
BstSFI CTRYAG 1 cut(s) 1305
BstV1I GCAGC 1 cut(s) 822
BstV2I GAAGAC 1 cut(s) 1122
BstX2I RGATCY 4 cut(s) 459, 702, 842, 1376
BstYI RGATCY 4 cut(s) 459, 702, 842, 1376
Bsu36I CCTNAGG 1 cut(s) 1263
BsuRI GGCC 4 cut(s) 261, 1105, 1245, 1251
BtgI CCRYGG 2 cut(s) 34, 532
BtgZI GCGATG 1 cut(s) 1061
BtsCI GGATG 3 cut(s) 265, 586, 1183
BtsIMutI CAGTG 2 cut(s) 80, 436
BveI ACCTGC 1 cut(s) 122
Cac8I GCNNGC 1 cut(s) 1107
CaiI CAGNNNCTG 1 cut(s) 308
CfoI GCGC 1 cut(s) 348
Cfr13I GGNCC 5 cut(s) 31, 214, 536, 1249, 1355
CsiI ACCWGGT 1 cut(s) 1369
Csp6I GTAC 2 cut(s) 518, 612
CviAII CATG 8 cut(s) 73, 137, 237, 415, 509, 905, 982, 1231
CviQI GTAC 2 cut(s) 518, 612
DdeI CTNAG 6 cut(s) 688, 993, 1027, 1209, 1263, 1380
DpnI GATC 8 cut(s) 112, 461, 693, 704, 844, 1094, 1326, 1378
DpnII GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
DraIII CACNNNGTG 2 cut(s) 122, 1373
DrdI GACNNNNNNGTC 1 cut(s) 1362
DseDI GACNNNNNNGTC 1 cut(s) 1362
EaeI YGGCCR 2 cut(s) 259, 1103
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
EciI GGCGGA 1 cut(s) 469
Eco31I GGTCTC 1 cut(s) 564
Eco47I GGWCC 4 cut(s) 31, 214, 536, 1355
Eco57I CTGAAG 1 cut(s) 548
Eco81I CCTNAGG 1 cut(s) 1263
Eco88I CYCGRG 1 cut(s) 741
EcoO109I RGGNCCY 1 cut(s) 214
EcoRI GAATTC 1 cut(s) 1225
EcoRII CCWGG 6 cut(s) 125, 733, 1245, 1330, 1357, 1369
FaeI CATG 8 cut(s) 76, 140, 240, 418, 512, 908, 985, 1234
FaqI GGGAC 3 cut(s) 44, 169, 1368
FatI CATG 8 cut(s) 72, 136, 236, 414, 508, 904, 981, 1230
FblI GTMKAC 2 cut(s) 321, 919
Fnu4HI GCNGC 1 cut(s) 811
FokI GGATG 3 cut(s) 252, 573, 1170
Fsp4HI GCNGC 1 cut(s) 811
FspBI CTAG 1 cut(s) 218
GlaI GCGC 1 cut(s) 347
GluI GCNGC 1 cut(s) 811
GsaI CCCAGC 1 cut(s) 670
GsuI CTGGAG 2 cut(s) 831, 1176
HaeII RGCGCY 1 cut(s) 349
HaeIII GGCC 4 cut(s) 261, 1105, 1245, 1251
HapII CCGG 2 cut(s) 119, 1235
HhaI GCGC 1 cut(s) 348
Hin1II CATG 8 cut(s) 76, 140, 240, 418, 512, 908, 985, 1234
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 1 cut(s) 11
HpaII CCGG 2 cut(s) 119, 1235
HphI GGTGA 4 cut(s) 50, 108, 347, 669
Hpy166II GTNNAC 4 cut(s) 322, 910, 920, 1367
Hpy188I TCNGA 9 cut(s) 310, 354, 547, 577, 637, 691, 780, 978, 1210
Hpy188III TCNNGA 9 cut(s) 154, 695, 706, 741, 834, 848, 1098, 1155, 1187
Hpy8I GTNNAC 4 cut(s) 322, 910, 920, 1367
HpyAV CCTTC 1 cut(s) 1134
HpyCH4III ACNGT 5 cut(s) 35, 145, 279, 558, 897
HpyCH4V TGCA 7 cut(s) 140, 373, 420, 931, 1085, 1117, 1258
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 1210
HpyF3I CTNAG 6 cut(s) 688, 993, 1027, 1209, 1263, 1380
Hsp92II CATG 8 cut(s) 76, 140, 240, 418, 512, 908, 985, 1234
HspAI GCGC 1 cut(s) 346
Kzo9I GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
LmnI GCTCC 4 cut(s) 380, 646, 1016, 1157
Lsp1109I GCAGC 1 cut(s) 822
LweI GCATC 1 cut(s) 382
MabI ACCWGGT 1 cut(s) 1369
MaeI CTAG 1 cut(s) 218
MaeIII GTNAC 4 cut(s) 298, 401, 802, 872
MalI GATC 8 cut(s) 112, 461, 693, 704, 844, 1094, 1326, 1378
MboI GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
MboII GAAGA 5 cut(s) 19, 554, 612, 1122, 1319
MflI RGATCY 4 cut(s) 459, 702, 842, 1376
MlsI TGGCCA 1 cut(s) 261
MluCI AATT 6 cut(s) 423, 764, 829, 932, 1143, 1225
MluNI TGGCCA 1 cut(s) 261
MlyI GAGTC 4 cut(s) 235, 1019, 1083, 1247
MmeI TCCRAC 2 cut(s) 163, 753
Mox20I TGGCCA 1 cut(s) 261
MscI TGGCCA 1 cut(s) 261
MseI TTAA 5 cut(s) 480, 759, 855, 1053, 1343
MslI CAYNNNNRTG 1 cut(s) 393
Msp20I TGGCCA 1 cut(s) 261
MspI CCGG 2 cut(s) 119, 1235
MspR9I CCNGG 7 cut(s) 120, 127, 735, 1247, 1332, 1359, 1371
Mva1269I GAATGC 3 cut(s) 649, 670, 1019
MvaI CCWGG 6 cut(s) 127, 735, 1247, 1332, 1359, 1371
MwoI GCNNNNNNNGC 2 cut(s) 137, 1210
NciI CCSGG 1 cut(s) 120
NdeII GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
NlaIII CATG 8 cut(s) 76, 140, 240, 418, 512, 908, 985, 1234
NlaIV GGNNCC 5 cut(s) 32, 124, 215, 443, 1356
NmuCI GTSAC 2 cut(s) 802, 872
PaeR7I CTCGAG 1 cut(s) 741
PctI GAATGC 3 cut(s) 649, 670, 1019
PfeI GAWTC 7 cut(s) 305, 505, 542, 632, 709, 725, 1180
PflFI GACNNNGTC 1 cut(s) 88
PflMI CCANNNNNTGG 1 cut(s) 1373
PkrI GCNGC 1 cut(s) 812
PleI GAGTC 4 cut(s) 235, 1019, 1082, 1246
PpsI GAGTC 4 cut(s) 235, 1019, 1082, 1246
PpuMI RGGWCCY 1 cut(s) 214
Psp5II RGGWCCY 1 cut(s) 214
Psp6I CCWGG 6 cut(s) 125, 733, 1245, 1330, 1357, 1369
PspFI CCCAGC 1 cut(s) 666
PspGI CCWGG 6 cut(s) 125, 733, 1245, 1330, 1357, 1369
PspN4I GGNNCC 5 cut(s) 32, 124, 215, 443, 1356
PspPI GGNCC 5 cut(s) 31, 214, 536, 1249, 1355
PspPPI RGGWCCY 1 cut(s) 214
PsrI GAACNNNNNNTAC 2 cut(s) 595, 627
PstNI CAGNNNCTG 1 cut(s) 308
PsuI RGATCY 4 cut(s) 459, 702, 842, 1376
PsyI GACNNNGTC 1 cut(s) 88
RsaI GTAC 2 cut(s) 519, 613
RsaNI GTAC 2 cut(s) 518, 612
RseI CAYNNNNRTG 1 cut(s) 393
SaqAI TTAA 5 cut(s) 480, 759, 855, 1053, 1343
SatI GCNGC 1 cut(s) 811
Sau3AI GATC 8 cut(s) 110, 459, 691, 702, 842, 1092, 1324, 1376
Sau96I GGNCC 5 cut(s) 31, 214, 536, 1249, 1355
SchI GAGTC 4 cut(s) 235, 1019, 1083, 1247
ScrFI CCNGG 7 cut(s) 120, 127, 735, 1247, 1332, 1359, 1371
SexAI ACCWGGT 1 cut(s) 1369
SfaNI GCATC 1 cut(s) 382
SfcI CTRYAG 1 cut(s) 1305
Sfr274I CTCGAG 1 cut(s) 741
SinI GGWCC 4 cut(s) 31, 214, 536, 1355
SlaI CTCGAG 1 cut(s) 741
SmiMI CAYNNNNRTG 1 cut(s) 393
SmlI CTYRAG 2 cut(s) 741, 1096
SmoI CTYRAG 2 cut(s) 741, 1096
Sse9I AATT 6 cut(s) 423, 764, 829, 932, 1143, 1225
SsiI CCGC 2 cut(s) 454, 606
SspMI CTAG 1 cut(s) 218
StyD4I CCNGG 7 cut(s) 118, 125, 733, 1245, 1330, 1357, 1369
TaaI ACNGT 5 cut(s) 35, 145, 279, 558, 897
TaqI TCGA 8 cut(s) 92, 630, 742, 960, 1023, 1178, 1273, 1291
TaqII GACCGA 1 cut(s) 1273
TasI AATT 6 cut(s) 423, 764, 829, 932, 1143, 1225
TatI WGTACW 1 cut(s) 611
TfiI GAWTC 7 cut(s) 305, 505, 542, 632, 709, 725, 1180
Tru1I TTAA 5 cut(s) 480, 759, 855, 1053, 1343
Tru9I TTAA 5 cut(s) 480, 759, 855, 1053, 1343
TscAI CASTG 2 cut(s) 87, 443
TseFI GTSAC 2 cut(s) 802, 872
TseI GCWGC 1 cut(s) 810
Tsp45I GTSAC 2 cut(s) 802, 872
TspDTI ATGAA 4 cut(s) 89, 225, 663, 740
TspGWI ACGGA 2 cut(s) 339, 549
TspRI CASTG 2 cut(s) 87, 443
Tth111I GACNNNGTC 1 cut(s) 88
Van91I CCANNNNNTGG 1 cut(s) 1373
VpaK11BI GGWCC 4 cut(s) 31, 214, 536, 1355
XapI RAATTY 5 cut(s) 423, 764, 829, 1143, 1225
XhoI CTCGAG 1 cut(s) 741
XmiI GTMKAC 2 cut(s) 321, 919
XspI CTAG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.