Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005975

Physical Location & Seq

Genomic Coordinates Reverse (-)

1524710 .. 1530688

Gene Structure 5979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0019400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGTGTGCTATTACCCAGATTGTTGCTGTGGCAAATTTGATGCCAGCTGATGATTCGGTGGACGAGCTTGATAGTTACATGTATCAAACTGTTGGGCACCAGATAGTTATCAGCTATGCAGAATGCATGGGAGTGCCATTGTTCAGAAGGCGAATACAAGGATCCACAAGGCATCAGAAGCTTAGCTATAGAATGACTCCTGGCGATGAAGTCGAAGATATGTTTATTTTGTTAAATGAAGTGAAACGACAGATTCCTTCTGTCACTGCTGTATCTTCTGGTGCTATTGCATCAGACTACCAAAGGCTGCGGGTGGAAAGTGTCTGTTCAAGGTTAGGTCTTGTTTCTCTAGCATACTTGTGGAAACAAGATCAGTCTTTGCTCCTTCAAGAAATGATAACTAGTGGGATTGTGGCGATTACAGTGAAGGTTGCTGCCATGGGTTTGGACCCCTCAAAGCACTTGGGCAAAGAAATGTCAGTGTTGCAGCCGTATCTGCATAAGTTGAAAGAGTTATATGGTATTAATGTATGTGGTGAAGGAGGGGAATATGAAACGTTAACACTGGATTGCCCTCTCTTTGTTAATGCTCGAATCATGCTTGATGAGTCTCGAGTAGTAATGCACTCTTCTGATTCCATAGCTCCAGTTGGGGTGCTTCATCCGGTGGCTTTTCATTTGCAAAGTAAGGCAGAGTCCCATTCTTTGGAGAGCAATGACAATGCTCATGAGATCTGTGAAGAGAAGGTGGGTTCTCTATTTGAAGTGCAAGGAGACACACAAGCATGTGATGCCATTTGCCAGGCTGATGCTGCAGTGGATGTCTTAGTTAAACTTCCTGAACATAAACTTCACATTTCAAGAACACAAAAGGACGATACATTTTCTATTTGTTGCTGGTTGCAAGATTCTTGTACAACTTCTGCAGGTTTGCAAGAAGACCTGGAGGCTGTTCTGAAGAAAATTGAATCGCTACTCGTGGAATATGGTTTTGGTTGGGAATATGTGCTCTACATTCATCTTTATATTGCTGATATGGGTGGGTTTTCTTCAGCAAATGATACATATGTGAGATATATAACCCAGGAGAAGTGCCCGTTTGGTGTTCCATCTCGCAGTACAGTTGAACTACCTTTGTTGCAAGTGGGTTTAGGTAATGCATACATGGAAGTTCTAGTTGCTAATGACCACACCAAAAGAGTTCTGCATGTACAAAGTATATCTTGTTGGGCACCCAGTTGTATTGGACCTTATAGCCAGGCAACTTTGCATAAGGAGATACTTCACATGGCTGGACAATTAGGGCTCAACCCTCCCACAATGACTTTATGTGATGGAGGTGTCATGGATGAGCTAGCAAAAGCACTGGACAATAGTGAAGCAGTGGCAAAAAGCTTTAACTGCTCAATATCTAATTCCACTATTATGTTTGTCAACTACTGTTCAACTAAAATTCCGCTGTTGGATAGATTAAATCTTCATGACAAGCATAAAGCTTTCCTTAAACAAACGAGGGACTTCAATTCGGATAAAGGAAGCAATTCTGAAGCATTGGAACCCATTTTCTTATATGTCCTTCTCCCGGATCTGCCAAAAGGGGCGCTTGTAGAAGTTAAGCCTGTTCTATTTGTTGCAGAAGATATTGAAGCAACAATTAGGGATGTGAAAGACCAATCTCACTCAAGATCCACTGGTTACTGGGGTTTTCAACATGCAAATTGGCATGATTCCTGCATTCAAAAGTGCATTGTTCCTGAAAAGTTATGTGCAGTTGTTTTGTCTGTGAGTAGCGCACTTGCTGCCATGATCTGTGACAAGGACAAAGGGGATCATCAAAATTCTGTCATAGGAAGGCAGATGGATAGAGTATTAAGATTTTGCTTATATCTTCTTGATAAGATTATCATGGAGAATGATTTTGGTTGGGAAGACACTATGTATTTGAGGTTCTACTTTCCAACTAGTCTTCAAGTGACTCTGGATGCACTGTCTTTCATGTTGACCAATGCATTTAGTGAATTTGCTGAGATGAATCGGAATATCAAGATTGGCAAGGACCCCATCTTCAACCTAGTTCCTGTCTTAGGTGCTGGGAAGTCTTCAGCATCAATGAATGATATCATCACCTGTGAACTATTGGCTCGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006873 GO:0006875 GO:0006879 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0019725 GO:0030003 GO:0031967 GO:0031975 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046916 GO:0048878 GO:0050801 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

ko04216 ko04978 map04216 map04978

Pfam Domains

Protein Families

FPN1

Protein Analysis

716

Amino Acids

79.58

Weight (kDa)

5.29

Isoelectric Point (pI)

45.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Diphthami_syn_2	PF01902	22 - 210	2.6e-29	Diphthamide synthase
Ribonuc_L-PSP	PF01042	308 - 381	2.3e-07	Endoribonuclease L-PSP
Ribonuc_L-PSP	PF01042	411 - 477	2.9e-07	Endoribonuclease L-PSP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56460 AT1G56460 AT1G56460
fragaria_vesca	FvH4_6g07480 FvH4_6g07480 FvH4_6g07480 FvH4_6g07480
malus_domestica	MD00G1208200.v1.1 MD04G1214800.v1.1 MD04G1215000.v1.1 MD12G1205400.v1.1
prunus_persica	Prupe.6G312500_v2.0.a1
pyrus_communis	pycom12g19330
rosa_chinensis	RchiOBHm_Chr3g0457151 RchiOBHm_Chr3g0457181
rosa_laevigata	RLG00000025244
rosa_multiflora	Rmu_sc0000488.1_g000012
rosa_roxburghii	Rroxscaffold_6G00422130
rosa_rugosa	Rorug03G0019200 Rorug03G0019300 Rorug03G0019300 Rorug03G0019400
rosa_samantha	Rh3AG079100 Rh3BG080800 Rh3CG080900 Rh3DG082800
rosa_wichuraiana	Rw3G006800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	917
AccB1I	GGYRCC	2 cut(s)	96, 1231
AccB7I	CCANNNNNTGG	1 cut(s)	706
AciI	CCGC	2 cut(s)	310, 1457
AclI	AACGTT	1 cut(s)	557
AclWI	GGATC	5 cut(s)	156, 169, 1593, 1680, 1836
AcsI	RAATTY	4 cut(s)	34, 1452, 1837, 2018
AcuI	CTGAAG	4 cut(s)	977, 1035, 1566, 2085
AfaI	GTAC	3 cut(s)	916, 1120, 1212
AfiI	CCNNNNNNNGG	3 cut(s)	706, 1582, 2084
AflIII	ACRYGT	1 cut(s)	78
AhlI	ACTAGT	2 cut(s)	401, 1961
AjnI	CCWGG	5 cut(s)	199, 801, 942, 1083, 1257
AjuI	GAANNNNNNNTTGG	2 cut(s)	975, 1007
AluBI	AGCT	9 cut(s)	47, 67, 114, 181, 186, 644, 1354, 1395, 1496
AluI	AGCT	9 cut(s)	47, 67, 114, 181, 186, 644, 1354, 1395, 1496
Alw21I	GWGCWC	1 cut(s)	1011
Alw26I	GTCTC	2 cut(s)	615, 768
AlwI	GGATC	5 cut(s)	156, 169, 1593, 1680, 1836
Ama87I	CYCGRG	1 cut(s)	612
ApeKI	GCWGC	5 cut(s)	307, 434, 487, 812, 1799
ApoI	RAATTY	4 cut(s)	34, 1452, 1837, 2018
AseI	ATTAAT	1 cut(s)	525
Asp700I	GAANNNNTTC	1 cut(s)	1540
AspLEI	GCGC	2 cut(s)	1603, 1793
AspS9I	GGNCC	3 cut(s)	448, 1247, 2056
AsuC2I	CCSGG	1 cut(s)	1583
AsuHPI	GGTGA	2 cut(s)	548, 2116
AsuNHI	GCTAGC	1 cut(s)	1354
AvaI	CYCGRG	1 cut(s)	612
AvaII	GGWCC	3 cut(s)	448, 1247, 2056
BaeGI	GKGCMC	3 cut(s)	99, 1097, 1234
BaeI	ACNNNNGTAYC	4 cut(s)	255, 288, 1053, 1086
BamHI	GGATCC	1 cut(s)	161
BanI	GGYRCC	2 cut(s)	96, 1231
BanII	GRGCYC	1 cut(s)	1308
BauI	CACGAG	1 cut(s)	977
BbsI	GAAGAC	4 cut(s)	945, 1935, 1958, 2091
Bbv12I	GWGCWC	1 cut(s)	1011
BbvI	GCAGC	5 cut(s)	294, 421, 499, 799, 1786
BccI	CCATC	4 cut(s)	1117, 1328, 1852, 2069
BceAI	ACGGC	1 cut(s)	475
BciT130I	CCWGG	5 cut(s)	201, 803, 944, 1085, 1259
BcnI	CCSGG	1 cut(s)	1583
BcoDI	GTCTC	2 cut(s)	615, 768
BcuI	ACTAGT	2 cut(s)	401, 1961
BfaI	CTAG	6 cut(s)	350, 402, 1175, 1355, 1962, 2072
BfmI	CTRYAG	3 cut(s)	187, 813, 924
BfoI	RGCGCY	1 cut(s)	1604
BfuAI	ACCTGC	1 cut(s)	917
BglII	AGATCT	1 cut(s)	732
BisI	GCNGC	5 cut(s)	308, 435, 488, 813, 1800
BlpI	GCTNAGC	1 cut(s)	182
BlsI	GCNGC	5 cut(s)	309, 436, 489, 814, 1801
Bme1390I	CCNGG	6 cut(s)	201, 803, 944, 1085, 1259, 1583
Bme18I	GGWCC	3 cut(s)	448, 1247, 2056
BmeT110I	CYCGRG	1 cut(s)	612
BmgT120I	GGNCC	3 cut(s)	448, 1247, 2056
BmiI	GGNNCC	6 cut(s)	98, 163, 450, 1233, 1557, 2058
BmrFI	CCNGG	6 cut(s)	201, 803, 944, 1085, 1259, 1583
BmrI	ACTGGG	2 cut(s)	1230, 1708
BmsI	GCATC	7 cut(s)	30, 181, 299, 781, 799, 1972, 2114
BmtI	GCTAGC	1 cut(s)	1358
BmuI	ACTGGG	2 cut(s)	1230, 1708
BpiI	GAAGAC	4 cut(s)	945, 1935, 1958, 2091
BpmI	CTGGAG	2 cut(s)	630, 965
Bpu1102I	GCTNAGC	1 cut(s)	182
BpuEI	CTTGAG	1 cut(s)	1666
BpuMI	CCSGG	1 cut(s)	1583
BsaBI	GATNNNNATC	1 cut(s)	107
BsaJI	CCNNGG	2 cut(s)	438, 1083
BsaWI	WCCGGW	1 cut(s)	664
Bsc4I	CCNNNNNNNGG	3 cut(s)	706, 1582, 2084
Bse1I	ACTGG	6 cut(s)	570, 647, 1236, 1371, 1696, 1703
Bse3DI	GCAATG	1 cut(s)	721
Bse8I	GATNNNNATC	1 cut(s)	107
BseBI	CCWGG	5 cut(s)	201, 803, 944, 1085, 1259
BseDI	CCNNGG	2 cut(s)	438, 1083
BseGI	GGATG	5 cut(s)	661, 826, 1354, 1666, 1987
BseJI	GATNNNNATC	1 cut(s)	107
BseLI	CCNNNNNNNGG	3 cut(s)	706, 1582, 2084
BseMI	GCAATG	1 cut(s)	721
BseMII	CTCAG	1 cut(s)	2016
BseNI	ACTGG	6 cut(s)	570, 647, 1236, 1371, 1696, 1703
BseSI	GKGCMC	3 cut(s)	99, 1097, 1234
BseXI	GCAGC	5 cut(s)	294, 421, 499, 799, 1786
BseYI	CCCAGC	1 cut(s)	2090
BsgI	GTGCAG	1 cut(s)	1788
BshNI	GGYRCC	2 cut(s)	96, 1231
BsiHKAI	GWGCWC	1 cut(s)	1011
BsiHKCI	CYCGRG	1 cut(s)	612
BsiSI	CCGG	2 cut(s)	665, 1583
BslFI	GGGAC	2 cut(s)	682, 1529
BslI	CCNNNNNNNGG	3 cut(s)	706, 1582, 2084
BsmAI	GTCTC	2 cut(s)	615, 768
BsmFI	GGGAC	2 cut(s)	682, 1529
BsmI	GAATGC	2 cut(s)	128, 1734
BsoBI	CYCGRG	1 cut(s)	612
Bsp1286I	GDGCHC	5 cut(s)	99, 1011, 1097, 1234, 1308
Bsp1407I	TGTACA	2 cut(s)	914, 1210
Bsp143I	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
Bsp1720I	GCTNAGC	1 cut(s)	182
Bsp19I	CCATGG	1 cut(s)	438
BspACI	CCGC	2 cut(s)	310, 1457
BspCNI	CTCAG	1 cut(s)	2017
BspHI	TCATGA	2 cut(s)	727, 1480
BspLI	GGNNCC	6 cut(s)	98, 163, 450, 1233, 1557, 2058
BspMAI	CTGCAG	2 cut(s)	817, 928
BspMI	ACCTGC	1 cut(s)	917
BspOI	GCTAGC	1 cut(s)	1358
BspPI	GGATC	5 cut(s)	156, 169, 1593, 1680, 1836
BspT107I	GGYRCC	2 cut(s)	96, 1231
BsrDI	GCAATG	1 cut(s)	721
BsrGI	TGTACA	2 cut(s)	914, 1210
BsrI	ACTGG	6 cut(s)	570, 647, 1236, 1371, 1696, 1703
BssECI	CCNNGG	2 cut(s)	438, 1083
BssMI	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
BssSI	CACGAG	1 cut(s)	977
BssT1I	CCWWGG	1 cut(s)	438
Bst2BI	CACGAG	1 cut(s)	977
Bst2UI	CCWGG	5 cut(s)	201, 803, 944, 1085, 1259
Bst4CI	ACNGT	5 cut(s)	91, 424, 1123, 1442, 1989
Bst6I	CTCTTC	2 cut(s)	634, 735
BstAPI	GCANNNNNTGC	2 cut(s)	791, 1799
BstAUI	TGTACA	2 cut(s)	914, 1210
BstC8I	GCNNGC	3 cut(s)	45, 1356, 2143
BstDEI	CTNAG	4 cut(s)	182, 826, 2025, 2083
BstDSI	CCRYGG	1 cut(s)	438
BstENI	CCTNNNNNAGG	1 cut(s)	2082
BstF5I	GGATG	5 cut(s)	661, 826, 1354, 1666, 1987
BstH2I	RGCGCY	1 cut(s)	1604
BstHHI	GCGC	2 cut(s)	1603, 1793
BstKTI	GATC	7 cut(s)	164, 373, 735, 1588, 1688, 1809, 1831
BstMAI	GTCTC	2 cut(s)	615, 768
BstMBI	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
BstMWI	GCNNNNNNNGC	6 cut(s)	178, 496, 791, 812, 1401, 1799
BstNI	CCWGG	5 cut(s)	201, 803, 944, 1085, 1259
BstNSI	RCATGY	4 cut(s)	82, 789, 1211, 1715
BstSCI	CCNGG	6 cut(s)	199, 801, 942, 1083, 1257, 1581
BstSFI	CTRYAG	3 cut(s)	187, 813, 924
BstSLI	GKGCMC	3 cut(s)	99, 1097, 1234
BstV1I	GCAGC	5 cut(s)	294, 421, 499, 799, 1786
BstV2I	GAAGAC	4 cut(s)	945, 1935, 1958, 2091
BstX2I	RGATCY	4 cut(s)	161, 732, 1585, 1685
BstXI	CCANNNNNNTGG	1 cut(s)	445
BstYI	RGATCY	4 cut(s)	161, 732, 1585, 1685
BtgI	CCRYGG	1 cut(s)	438
BtgZI	GCGATG	1 cut(s)	219
BtsCI	GGATG	5 cut(s)	661, 826, 1354, 1666, 1987
BtsI	GCAGTG	3 cut(s)	264, 822, 1389
BtsIMutI	CAGTG	9 cut(s)	264, 429, 486, 563, 822, 1364, 1389, 1689, 1985
BveI	ACCTGC	1 cut(s)	917
Cac8I	GCNNGC	3 cut(s)	45, 1356, 2143
CciI	TCATGA	2 cut(s)	727, 1480
CfoI	GCGC	2 cut(s)	1603, 1793
Cfr13I	GGNCC	3 cut(s)	448, 1247, 2056
Csp6I	GTAC	3 cut(s)	915, 1119, 1211
CviQI	GTAC	3 cut(s)	915, 1119, 1211
DdeI	CTNAG	4 cut(s)	182, 826, 2025, 2083
DpnI	GATC	7 cut(s)	163, 372, 734, 1587, 1687, 1808, 1830
DpnII	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
Eam1104I	CTCTTC	2 cut(s)	634, 735
EarI	CTCTTC	2 cut(s)	634, 735
Eco130I	CCWWGG	1 cut(s)	438
Eco24I	GRGCYC	1 cut(s)	1308
Eco32I	GATATC	1 cut(s)	2119
Eco47I	GGWCC	3 cut(s)	448, 1247, 2056
Eco57I	CTGAAG	4 cut(s)	977, 1035, 1566, 2085
Eco88I	CYCGRG	1 cut(s)	612
EcoNI	CCTNNNNNAGG	1 cut(s)	2082
EcoO109I	RGGNCCY	1 cut(s)	2056
EcoRII	CCWGG	5 cut(s)	199, 801, 942, 1083, 1257
EcoRV	GATATC	1 cut(s)	2119
EcoT14I	CCWWGG	1 cut(s)	438
EcoT22I	ATGCAT	3 cut(s)	128, 1162, 2011
EcoT38I	GRGCYC	1 cut(s)	1308
ErhI	CCWWGG	1 cut(s)	438
FalI	AAGNNNNNCTT	6 cut(s)	1207, 1239, 1485, 1517, 1587, 1619
FaqI	GGGAC	2 cut(s)	682, 1529
FauI	CCCGC	1 cut(s)	303
FauNDI	CATATG	1 cut(s)	1066
Fnu4HI	GCNGC	5 cut(s)	308, 435, 488, 813, 1800
FokI	GGATG	5 cut(s)	648, 833, 1361, 1673, 1994
FriOI	GRGCYC	1 cut(s)	1308
Fsp4HI	GCNGC	5 cut(s)	308, 435, 488, 813, 1800
FspBI	CTAG	6 cut(s)	350, 402, 1175, 1355, 1962, 2072
GlaI	GCGC	2 cut(s)	1602, 1792
GluI	GCNGC	5 cut(s)	308, 435, 488, 813, 1800
GsaI	CCCAGC	1 cut(s)	2094
GsuI	CTGGAG	2 cut(s)	630, 965
HaeII	RGCGCY	1 cut(s)	1604
HapII	CCGG	2 cut(s)	665, 1583
HhaI	GCGC	2 cut(s)	1603, 1793
Hin6I	GCGC	2 cut(s)	1601, 1791
HinP1I	GCGC	2 cut(s)	1601, 1791
HincII	GTYRAC	3 cut(s)	561, 1435, 2001
HindII	GTYRAC	3 cut(s)	561, 1435, 2001
HindIII	AAGCTT	3 cut(s)	179, 1393, 1494
HpaI	GTTAAC	1 cut(s)	561
HpaII	CCGG	2 cut(s)	665, 1583
HphI	GGTGA	2 cut(s)	548, 2116
Hpy166II	GTNNAC	5 cut(s)	61, 561, 1435, 2001, 2132
Hpy188I	TCNGA	8 cut(s)	146, 177, 295, 634, 957, 1528, 1546, 2037
Hpy8I	GTNNAC	5 cut(s)	61, 561, 1435, 2001, 2132
HpyAV	CCTTC	8 cut(s)	141, 267, 395, 421, 533, 739, 1586, 1845
HpyCH4III	ACNGT	5 cut(s)	91, 424, 1123, 1442, 1989
HpyCH4IV	ACGT	1 cut(s)	557
HpyF10VI	GCNNNNNNNGC	6 cut(s)	178, 496, 791, 812, 1401, 1799
HpyF3I	CTNAG	4 cut(s)	182, 826, 2025, 2083
HpySE526I	ACGT	1 cut(s)	557
HspAI	GCGC	2 cut(s)	1601, 1791
KspAI	GTTAAC	1 cut(s)	561
Kzo9I	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
LmnI	GCTCC	2 cut(s)	387, 649
Lsp1109I	GCAGC	5 cut(s)	294, 421, 499, 799, 1786
LweI	GCATC	7 cut(s)	30, 181, 299, 781, 799, 1972, 2114
MaeI	CTAG	6 cut(s)	350, 402, 1175, 1355, 1962, 2072
MaeII	ACGT	1 cut(s)	557
MaeIII	GTNAC	5 cut(s)	74, 262, 1694, 1811, 1972
MalI	GATC	7 cut(s)	163, 372, 734, 1587, 1687, 1808, 1830
MboI	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
MflI	RGATCY	4 cut(s)	161, 732, 1585, 1685
MhlI	GDGCHC	5 cut(s)	99, 1011, 1097, 1234, 1308
MlyI	GAGTC	4 cut(s)	190, 617, 704, 1969
MmeI	TCCRAC	2 cut(s)	1443, 1982
MnlI	CCTC	8 cut(s)	463, 536, 585, 940, 1323, 1331, 1506, 1938
Mph1103I	ATGCAT	3 cut(s)	128, 1162, 2011
MroXI	GAANNNNTTC	1 cut(s)	1540
MslI	CAYNNNNRTG	4 cut(s)	131, 358, 784, 1424
MspA1I	CMGCKG	2 cut(s)	47, 1459
MspI	CCGG	2 cut(s)	665, 1583
MspR9I	CCNGG	6 cut(s)	201, 803, 944, 1085, 1259, 1583
Mva1269I	GAATGC	2 cut(s)	128, 1734
MvaI	CCWGG	5 cut(s)	201, 803, 944, 1085, 1259
MwoI	GCNNNNNNNGC	6 cut(s)	178, 496, 791, 812, 1401, 1799
NciI	CCSGG	1 cut(s)	1583
NcoI	CCATGG	1 cut(s)	438
NdeI	CATATG	1 cut(s)	1066
NdeII	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
NheI	GCTAGC	1 cut(s)	1354
NlaIV	GGNNCC	6 cut(s)	98, 163, 450, 1233, 1557, 2058
NmuCI	GTSAC	3 cut(s)	262, 1811, 1972
NsiI	ATGCAT	3 cut(s)	128, 1162, 2011
NspI	RCATGY	4 cut(s)	82, 789, 1211, 1715
PaeR7I	CTCGAG	1 cut(s)	612
PagI	TCATGA	2 cut(s)	727, 1480
PciI	ACATGT	1 cut(s)	78
PctI	GAATGC	2 cut(s)	128, 1734
PdmI	GAANNNNTTC	1 cut(s)	1540
PfeI	GAWTC	8 cut(s)	53, 253, 594, 635, 908, 968, 1727, 2032
PflMI	CCANNNNNTGG	1 cut(s)	706
PfoI	TCCNGGA	1 cut(s)	1581
PkrI	GCNGC	5 cut(s)	309, 436, 489, 814, 1801
PleI	GAGTC	4 cut(s)	190, 616, 703, 1969
PpsI	GAGTC	4 cut(s)	190, 616, 703, 1969
PpuMI	RGGWCCY	1 cut(s)	2056
PscI	ACATGT	1 cut(s)	78
PshBI	ATTAAT	1 cut(s)	525
Psp1406I	AACGTT	1 cut(s)	557
Psp5II	RGGWCCY	1 cut(s)	2056
Psp6I	CCWGG	5 cut(s)	199, 801, 942, 1083, 1257
PspFI	CCCAGC	1 cut(s)	2090
PspGI	CCWGG	5 cut(s)	199, 801, 942, 1083, 1257
PspN4I	GGNNCC	6 cut(s)	98, 163, 450, 1233, 1557, 2058
PspPI	GGNCC	3 cut(s)	448, 1247, 2056
PspPPI	RGGWCCY	1 cut(s)	2056
PsrI	GAACNNNNNNTAC	2 cut(s)	1931, 1963
PstI	CTGCAG	2 cut(s)	817, 928
PsuI	RGATCY	4 cut(s)	161, 732, 1585, 1685
PvuII	CAGCTG	1 cut(s)	47
RsaI	GTAC	3 cut(s)	916, 1120, 1212
RsaNI	GTAC	3 cut(s)	915, 1119, 1211
RseI	CAYNNNNRTG	4 cut(s)	131, 358, 784, 1424
SatI	GCNGC	5 cut(s)	308, 435, 488, 813, 1800
Sau3AI	GATC	7 cut(s)	161, 370, 732, 1585, 1685, 1806, 1828
Sau96I	GGNCC	3 cut(s)	448, 1247, 2056
SchI	GAGTC	4 cut(s)	190, 617, 704, 1969
ScrFI	CCNGG	6 cut(s)	201, 803, 944, 1085, 1259, 1583
SduI	GDGCHC	5 cut(s)	99, 1011, 1097, 1234, 1308
SfaNI	GCATC	7 cut(s)	30, 181, 299, 781, 799, 1972, 2114
SfcI	CTRYAG	3 cut(s)	187, 813, 924
Sfr274I	CTCGAG	1 cut(s)	612
SinI	GGWCC	3 cut(s)	448, 1247, 2056
SlaI	CTCGAG	1 cut(s)	612
SmiMI	CAYNNNNRTG	4 cut(s)	131, 358, 784, 1424
SmlI	CTYRAG	2 cut(s)	612, 1681
SmoI	CTYRAG	2 cut(s)	612, 1681
SpeI	ACTAGT	2 cut(s)	401, 1961
SsiI	CCGC	2 cut(s)	310, 1457
SspMI	CTAG	6 cut(s)	350, 402, 1175, 1355, 1962, 2072
StyD4I	CCNGG	6 cut(s)	199, 801, 942, 1083, 1257, 1581
StyI	CCWWGG	1 cut(s)	438
TaaI	ACNGT	5 cut(s)	91, 424, 1123, 1442, 1989
TaiI	ACGT	1 cut(s)	560
TaqI	TCGA	3 cut(s)	213, 592, 613
TatI	WGTACW	3 cut(s)	914, 1118, 1210
TfiI	GAWTC	8 cut(s)	53, 253, 594, 635, 908, 968, 1727, 2032
TscAI	CASTG	9 cut(s)	271, 429, 486, 570, 822, 1371, 1389, 1696, 1992
TseFI	GTSAC	3 cut(s)	262, 1811, 1972
TseI	GCWGC	5 cut(s)	307, 434, 487, 812, 1799
Tsp45I	GTSAC	3 cut(s)	262, 1811, 1972
TspRI	CASTG	9 cut(s)	271, 429, 486, 570, 822, 1371, 1389, 1696, 1992
Van91I	CCANNNNNTGG	1 cut(s)	706
VpaK11BI	GGWCC	3 cut(s)	448, 1247, 2056
VspI	ATTAAT	1 cut(s)	525
XagI	CCTNNNNNAGG	1 cut(s)	2082
XapI	RAATTY	4 cut(s)	34, 1452, 1837, 2018
XceI	RCATGY	4 cut(s)	82, 789, 1211, 1715
XhoI	CTCGAG	1 cut(s)	612
XmnI	GAANNNNTTC	1 cut(s)	1540
XspI	CTAG	6 cut(s)	350, 402, 1175, 1355, 1962, 2072
Zsp2I	ATGCAT	3 cut(s)	128, 1162, 2011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.