Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005975

Physical Location & Seq

Genomic Coordinates Forward (+)

27978345 .. 27984650

Gene Structure 6306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G312500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2826 bp

ATGGAGGGTTTTGGAGGCTTGGGATTCAGTGATGTAACCAATGCTGTGAGGAAGAAAAGGAGTAACACATCTCGTCGTCCTCGGAATGATTCACCGCTGCCTTTCGATAATCGAGATACCATGTCATCAACGCCTCCTTCAGAAGATGTAAGCAAATTGTCAAGTGATGATAATAATGATTATGGTTCAATTACTCAAAAGAGGGATATCAACCTGAACCTATGTAGTGCAAGGGCTTCATTTAGTAACATTATTGAAGCTGAATCTGCCCAGAATATGAATAAAAGTGAAGGAGGAGGATCCGGAGAATCTGATGAAGCTTCCAATGATGGTTCTTTTCGAGGCAGTAACGACCATAGGCATAGGGAGATTGATTCACAAAGGTCCAGCAAGGGTGCCCTTGCACCTGCTAATTGGAAAGGTACAAACAAGGTTGCTCCTTTTGGAGTTGTTTCAGATTGCTCAGAGAATGAGAATAAAGTGAAAATGGTTAAGCTTAAAGTTGGTAATGTTACACGCACAATTCAGCCAAGTCTACGTCTGATGGAGAACTCAGATGACAATCGTTCCTTTAGTTCAGATAAAGGAAGTGGGTTACGAGGAGTCCCATGGAAGGATTTATCTAAAAGCGTCACTGATGTTGGGAAGGCTGATTCTTCAAGGGGTGGGATGCCTGAAGAACCTGTTCGCAAGAGCAAACGTGTCCTTAAGAGACGCTTGTTGGATGCAGTTGATGATGGAGATGATGATGACGTGGAAGTTCGATACCTTGAAAAACTCAAAACATCTAAGATTACTTCAGATCACAGTGTGGAATACAATGAAGATGAGGAAAGAAAAAGCAGAAAAGAAAGGAAGATTTCAACGGTGATGAAGGGAAGTGGTGTTGGCCAGTTCAGTGTAGATTTGGGAGGTTATGGCATCTCAAAATCAGGCAAGGAGAGTAGGAAGTCTAGAGGAGGAAGAGTATCTGATGATACTGATTATGAAGAAGAGGAAGAACCTGTCTCTGATGGCGAGCCCAGTACTAAGAGGAAAAAATTGAGAAAGGAGTTTGTTGAATCATCCTCATATAATAAGGAGATGACAGTCACTACTCGTCAAAGGGCTCTTAAAACTGGAAATAATGTCGCTTCCAGCTTAGGTGCAAGTCCAATTGAGTTCCCCAACGGGTTGCCCCCTGCTCCACCAAGAAAGCAAAAAGAGAAACTCTGTGCACTGGAGCAGCAAATCAAGAAAGCAGAGGCTGCTGAGAGACGTAGGATGCAAGTAGAGAAGGCAGCTAGAGAATCTGAGGCTGAGGCAATCAGAAAGATTTTGGGCCAAGATTCAAGTAGGAAGAAACGAGAAGACAAGATAAAGAAACGGCAAGAAGATCTGGCACATGAAAGGGCTGCAAATGCTTTCATACTTCCATCAGATTCTGTTCGATGGGTGATGGGTCCATCAGGATCGGTCGTCACTTTCCCTGATGAAATGGGCTTGCCAGCTATATTCGACTCCAAGCCTTGCAGTTACCCTCCTCCTCGTGAGAAGTGCGCAGGGCCATATTGTAGAAATCCATACAAGTACCGTGATTCGCAGTCAAAGCTCCCTCTGTGCAGTCTCCAGTGCTACAAGGCGATACATGAGAAAACGGCCCCTCTATCTGCCTTCGTTCTTTCTTCCAGAAGCATCGGGTGCCCGCGGTCCATGGCCAGAGCTCCAAATAAGCACGGTCGCGATCAAGCTCTGGATTTCCAGGGGTTTTTGAGTGACTTGCAGGACTGGGAGCTTTCTCTCAAGGACAAGGACAAAAAAATGAGGCCAAAAGATTCACACCAGGAAAAGCTGACTAGAGATTTAGGAACTAGTTCGGGGAATTATGACTACTCGAGGAATTTAGATTCAATCAATACAATGTCAAGTAGTTTCATTTCGGAAGATAGTCTTCCCGATGCTGCTTCAGAGAAAGAATTGGGTAATGAGTATTTTAAGCAGAAGAAGTTTAGAGAAGCTATTGACTGCTATTCAAGAAGCATTGCTTTGTCTCCGTCTGCAGTAGCTTATGCAAATAGAGCAATGGCATATATAAAAATCAAAAGTTTCCAGGAAGCTGAGGATGACTGTACTGAGGCCTTGAATTTGGATGATCGTTATATAAAAGCATACTCACGACGTGCAACGGCTAGAAAAGAACTTGGAAAACTTAAAGAATCAATTGAGGATGCTGAGTTTGCCCTGAGGTTGGAGCCTCAGAACCAAGAAATCAAGAAACAATACACTGAGGCCAAATCTTTGTATGATAAAACAATTCTTCAGAAGGCATCTGGAGCGCAGAAAAATTCTGTACAAGAAATGCGGAAAGTGGGAAAGTTGGATACCAAAGTGAACGGACAAAGCATCCAGCCTGCCTCCAGCAGTGCTCAAATAACAGAAATGACTGCAGTTCAAGATCACACTAAGAGAAATAACACAACTAGGAATCCAGAGGTGAAGGCATCGGTACAAGAGCTTGCATCTCGAGCTGCTTCCCGAGTCAAGGCTGTGGCTGCGGAAAAGATCAAACCACCAAATTCGGCATATCAATTTGAGGTTTCTTGGCGAGGATTCTCTGGAGATAATGCTCGACAGACTAGCCTGTTGAAGGTCTGCAAAAGTATTCATGTGGTTTACTTTAAAAAATCTGCCAAAATGCAAGATTCATATGTTCGTTGTCATCCCAAAGTAGGTGACCATGAATGTGTTCTTTTTGCATGGTGGTCATCCTTGTGGTTGACCACTGCAAAGATTCTATTAGTCTCATCTATTGTCCTCTTTGGATGGTTGCCAGAAGTATACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAPA-1 zf-HIT

Protein Analysis

942

Amino Acids

105.05

Weight (kDa)

9.19

Isoelectric Point (pI)

51.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56460 AT1G56460 AT1G56460
fragaria_vesca	FvH4_6g07480 FvH4_6g07480 FvH4_6g07480 FvH4_6g07480
malus_domestica	MD00G1208200.v1.1 MD04G1214800.v1.1 MD04G1215000.v1.1 MD12G1205400.v1.1
prunus_persica	Prupe.6G312500_v2.0.a1
pyrus_communis	pycom12g19330
rosa_chinensis	RchiOBHm_Chr3g0457151 RchiOBHm_Chr3g0457181
rosa_laevigata	RLG00000025244
rosa_multiflora	Rmu_sc0000488.1_g000012
rosa_roxburghii	Rroxscaffold_6G00422130
rosa_rugosa	Rorug03G0019200 Rorug03G0019300 Rorug03G0019300 Rorug03G0019400
rosa_samantha	Rh3AG079100 Rh3BG080800 Rh3CG080900 Rh3DG082800
rosa_wichuraiana	Rw3G006800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	415
Acc16I	TGCGCA	1 cut(s)	1540
Acc36I	ACCTGC	1 cut(s)	415
AccB1I	GGYRCC	2 cut(s)	395, 1680
AccI	GTMKAC	2 cut(s)	535, 2817
AccII	CGCG	2 cut(s)	1687, 1722
AccIII	TCCGGA	1 cut(s)	302
AciI	CCGC	5 cut(s)	95, 1685, 1687, 2341, 2534
AclWI	GGATC	3 cut(s)	294, 307, 1459
AcoI	YGGCCR	2 cut(s)	889, 1695
AcsI	RAATTY	4 cut(s)	1879, 2122, 2323, 2554
AcuI	CTGAAG	5 cut(s)	123, 696, 783, 1929, 2282
AdeI	CACNNNGTG	2 cut(s)	811, 2159
AfaI	GTAC	6 cut(s)	424, 1027, 1571, 2110, 2331, 2487
AfiI	CCNNNNNNNGG	5 cut(s)	613, 2227, 2521, 2626, 2708
AflII	CTTAAG	1 cut(s)	707
AflIII	ACRYGT	1 cut(s)	700
AhlI	ACTAGT	1 cut(s)	1850
AjiI	CACGTC	2 cut(s)	754, 2159
AjnI	CCWGG	3 cut(s)	1740, 1821, 2088
Alw21I	GWGCWC	3 cut(s)	1219, 1705, 2407
Alw26I	GTCTC	6 cut(s)	706, 1012, 1249, 1610, 2034, 2785
Alw44I	GTGCAC	1 cut(s)	1215
AlwI	GGATC	3 cut(s)	294, 307, 1459
AlwNI	CAGNNNCTG	2 cut(s)	1247, 1424
Ama87I	CYCGRG	3 cut(s)	1873, 2502, 2514
Aor13HI	TCCGGA	1 cut(s)	302
AoxI	GGCC	8 cut(s)	889, 1321, 1544, 1638, 1695, 1805, 2115, 2268
ApaLI	GTGCAC	1 cut(s)	1215
ApeKI	GCWGC	8 cut(s)	97, 1225, 1247, 1280, 1394, 1940, 2507, 2531
ApoI	RAATTY	4 cut(s)	1879, 2122, 2323, 2554
Asp700I	GAANNNNTTC	3 cut(s)	684, 1852, 2724
AspLEI	GCGC	2 cut(s)	1541, 2317
AspS9I	GGNCC	6 cut(s)	384, 1321, 1442, 1544, 1639, 1689
AsuHPI	GGTGA	5 cut(s)	84, 880, 1447, 2485, 2723
AvaI	CYCGRG	3 cut(s)	1873, 2502, 2514
AvaII	GGWCC	3 cut(s)	384, 1442, 1689
AxyI	CCTNAGG	1 cut(s)	2222
BaeGI	GKGCMC	3 cut(s)	400, 1219, 1685
BaeI	ACNNNNGTAYC	2 cut(s)	2352, 2385
BalI	TGGCCA	2 cut(s)	891, 1697
BamHI	GGATCC	1 cut(s)	299
BanI	GGYRCC	2 cut(s)	395, 1680
BanII	GRGCYC	3 cut(s)	1023, 1111, 1705
BauI	CACGAG	1 cut(s)	1527
BbsI	GAAGAC	2 cut(s)	1356, 1922
Bbv12I	GWGCWC	3 cut(s)	1219, 1705, 2407
BbvCI	CCTCAGC	2 cut(s)	1299, 2097
BbvI	GCAGC	8 cut(s)	84, 1234, 1237, 1292, 1381, 1927, 2494, 2518
BccI	CCATC	9 cut(s)	323, 538, 731, 1007, 1423, 1425, 1432, 1453, 2796
BceAI	ACGGC	3 cut(s)	1382, 1653, 2181
BciT130I	CCWGG	3 cut(s)	1742, 1823, 2090
BciVI	GTATCC	1 cut(s)	2353
BcoDI	GTCTC	6 cut(s)	706, 1012, 1249, 1610, 2034, 2785
BcuI	ACTAGT	1 cut(s)	1850
BfaI	CTAG	7 cut(s)	954, 1284, 1836, 1851, 2169, 2460, 2616
BfmI	CTRYAG	2 cut(s)	2037, 2424
BfrI	CTTAAG	1 cut(s)	707
BfuAI	ACCTGC	1 cut(s)	415
BfuI	GTATCC	1 cut(s)	2353
BglII	AGATCT	1 cut(s)	1375
BisI	GCNGC	8 cut(s)	98, 1226, 1248, 1281, 1395, 1941, 2508, 2532
BlsI	GCNGC	8 cut(s)	99, 1227, 1249, 1282, 1396, 1942, 2509, 2533
BmcAI	AGTACT	1 cut(s)	1027
Bme1390I	CCNGG	3 cut(s)	1742, 1823, 2090
Bme18I	GGWCC	3 cut(s)	384, 1442, 1689
BmeT110I	CYCGRG	3 cut(s)	1873, 2502, 2514
BmgBI	CACGTC	2 cut(s)	754, 2159
BmgT120I	GGNCC	6 cut(s)	384, 1321, 1442, 1544, 1639, 1689
BmiI	GGNNCC	6 cut(s)	301, 397, 1443, 1641, 1682, 2232
BmrFI	CCNGG	3 cut(s)	1742, 1823, 2090
BmrI	ACTGGG	2 cut(s)	1017, 1777
BmuI	ACTGGG	2 cut(s)	1017, 1777
BpiI	GAAGAC	2 cut(s)	1356, 1922
BpmI	CTGGAG	5 cut(s)	1241, 1592, 2331, 2380, 2616
Bpu10I	CCTNAGC	3 cut(s)	1141, 1299, 2097
BpuEI	CTTGAG	1 cut(s)	1766
BsaBI	GATNNNNATC	1 cut(s)	561
BsaJI	CCNNGG	5 cut(s)	80, 608, 1685, 1692, 1741
BsaWI	WCCGGW	1 cut(s)	302
BsaXI	ACNNNNNCTCC	2 cut(s)	951, 981
Bsc4I	CCNNNNNNNGG	5 cut(s)	613, 2227, 2521, 2626, 2708
Bse1I	ACTGG	7 cut(s)	892, 1023, 1123, 1224, 1609, 1772, 2821
Bse21I	CCTNAGG	1 cut(s)	2222
Bse3DI	GCAATG	2 cut(s)	2019, 2067
Bse8I	GATNNNNATC	1 cut(s)	561
BseAI	TCCGGA	1 cut(s)	302
BseBI	CCWGG	3 cut(s)	1742, 1823, 2090
BseDI	CCNNGG	5 cut(s)	80, 608, 1685, 1692, 1741
BseJI	GATNNNNATC	1 cut(s)	561
BseLI	CCNNNNNNNGG	5 cut(s)	613, 2227, 2521, 2626, 2708
BseMI	GCAATG	2 cut(s)	2019, 2067
BseNI	ACTGG	7 cut(s)	892, 1023, 1123, 1224, 1609, 1772, 2821
BseRI	GAGGAG	5 cut(s)	309, 615, 972, 1512, 1515
BseSI	GKGCMC	3 cut(s)	400, 1219, 1685
BseXI	GCAGC	8 cut(s)	84, 1234, 1237, 1292, 1381, 1927, 2494, 2518
BsgI	GTGCAG	1 cut(s)	1621
Bsh1236I	CGCG	2 cut(s)	1687, 1722
Bsh1285I	CGRYCG	2 cut(s)	1458, 1720
BshFI	GGCC	8 cut(s)	891, 1323, 1546, 1640, 1697, 1807, 2117, 2270
BshNI	GGYRCC	2 cut(s)	395, 1680
BsiEI	CGRYCG	2 cut(s)	1458, 1720
BsiHKAI	GWGCWC	3 cut(s)	1219, 1705, 2407
BsiHKCI	CYCGRG	3 cut(s)	1873, 2502, 2514
BsiSI	CCGG	1 cut(s)	303
BslFI	GGGAC	1 cut(s)	590
BslI	CCNNNNNNNGG	5 cut(s)	613, 2227, 2521, 2626, 2708
BsmAI	GTCTC	6 cut(s)	706, 1012, 1249, 1610, 2034, 2785
BsmBI	CGTCTC	2 cut(s)	706, 1249
BsmFI	GGGAC	1 cut(s)	590
BsnI	GGCC	8 cut(s)	891, 1323, 1546, 1640, 1697, 1807, 2117, 2270
BsoBI	CYCGRG	3 cut(s)	1873, 2502, 2514
Bsp1286I	GDGCHC	7 cut(s)	400, 1023, 1111, 1219, 1685, 1705, 2407
Bsp13I	TCCGGA	1 cut(s)	302
Bsp1407I	TGTACA	1 cut(s)	2329
Bsp143I	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
Bsp19I	CCATGG	2 cut(s)	608, 1692
Bsp68I	TCGCGA	1 cut(s)	1722
BspACI	CCGC	5 cut(s)	95, 1685, 1687, 2341, 2534
BspANI	GGCC	8 cut(s)	891, 1323, 1546, 1640, 1697, 1807, 2117, 2270
BspEI	TCCGGA	1 cut(s)	302
BspFNI	CGCG	2 cut(s)	1687, 1722
BspLI	GGNNCC	6 cut(s)	301, 397, 1443, 1641, 1682, 2232
BspMAI	CTGCAG	2 cut(s)	2041, 2428
BspMI	ACCTGC	1 cut(s)	415
BspPI	GGATC	3 cut(s)	294, 307, 1459
BspT107I	GGYRCC	2 cut(s)	395, 1680
BspTI	CTTAAG	1 cut(s)	707
BsrDI	GCAATG	2 cut(s)	2019, 2067
BsrGI	TGTACA	1 cut(s)	2329
BsrI	ACTGG	7 cut(s)	892, 1023, 1123, 1224, 1609, 1772, 2821
BssECI	CCNNGG	5 cut(s)	80, 608, 1685, 1692, 1741
BssMI	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
BssNAI	GTATAC	1 cut(s)	2818
BssSI	CACGAG	1 cut(s)	1527
BssT1I	CCWWGG	2 cut(s)	608, 1692
Bst1107I	GTATAC	1 cut(s)	2818
Bst2BI	CACGAG	1 cut(s)	1527
Bst2UI	CCWGG	3 cut(s)	1742, 1823, 2090
Bst4CI	ACNGT	6 cut(s)	809, 868, 1090, 1574, 1718, 2108
Bst6I	CTCTTC	2 cut(s)	958, 987
BstAFI	CTTAAG	1 cut(s)	707
BstAPI	GCANNNNNTGC	2 cut(s)	1247, 1680
BstAUI	TGTACA	1 cut(s)	2329
BstC8I	GCNNGC	6 cut(s)	1019, 1484, 1488, 1685, 2391, 2496
BstDSI	CCRYGG	3 cut(s)	608, 1685, 1692
BstEII	GGTNACC	1 cut(s)	2711
BstENI	CCTNNNNNAGG	1 cut(s)	2624
BstFNI	CGCG	2 cut(s)	1687, 1722
BstHHI	GCGC	2 cut(s)	1541, 2317
BstKTI	GATC	8 cut(s)	302, 805, 1378, 1454, 1726, 2134, 2437, 2544
BstMAI	GTCTC	6 cut(s)	706, 1012, 1249, 1610, 2034, 2785
BstMBI	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
BstMCI	CGRYCG	2 cut(s)	1458, 1720
BstNI	CCWGG	3 cut(s)	1742, 1823, 2090
BstPI	GGTNACC	1 cut(s)	2711
BstSCI	CCNGG	3 cut(s)	1740, 1821, 2088
BstSFI	CTRYAG	2 cut(s)	2037, 2424
BstSLI	GKGCMC	3 cut(s)	400, 1219, 1685
BstUI	CGCG	2 cut(s)	1687, 1722
BstV1I	GCAGC	8 cut(s)	84, 1234, 1237, 1292, 1381, 1927, 2494, 2518
BstV2I	GAAGAC	2 cut(s)	1356, 1922
BstX2I	RGATCY	2 cut(s)	299, 1375
BstYI	RGATCY	2 cut(s)	299, 1375
BstZ17I	GTATAC	1 cut(s)	2818
Bsu36I	CCTNAGG	1 cut(s)	2222
BsuI	GTATCC	1 cut(s)	2353
BsuRI	GGCC	8 cut(s)	891, 1323, 1546, 1640, 1697, 1807, 2117, 2270
BtgI	CCRYGG	3 cut(s)	608, 1685, 1692
BtrI	CACGTC	2 cut(s)	754, 2159
BtsI	GCAGTG	2 cut(s)	2407, 2760
BtsIMutI	CAGTG	9 cut(s)	34, 633, 814, 904, 1217, 1616, 2262, 2407, 2760
BtuMI	TCGCGA	1 cut(s)	1722
BveI	ACCTGC	1 cut(s)	415
Cac8I	GCNNGC	6 cut(s)	1019, 1484, 1488, 1685, 2391, 2496
CaiI	CAGNNNCTG	2 cut(s)	1247, 1424
CfoI	GCGC	2 cut(s)	1541, 2317
Cfr13I	GGNCC	6 cut(s)	384, 1321, 1442, 1544, 1639, 1689
Cfr42I	CCGCGG	1 cut(s)	1688
CseI	GACGC	2 cut(s)	619, 723
Csp6I	GTAC	6 cut(s)	423, 1026, 1570, 2109, 2330, 2486
CviAII	CATG	8 cut(s)	121, 609, 1385, 1628, 1693, 2645, 2717, 2736
CviQI	GTAC	6 cut(s)	423, 1026, 1570, 2109, 2330, 2486
DpnI	GATC	8 cut(s)	301, 804, 1377, 1453, 1725, 2133, 2436, 2543
DpnII	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
DraI	TTTAAA	1 cut(s)	2659
DraIII	CACNNNGTG	2 cut(s)	811, 2159
EaeI	YGGCCR	2 cut(s)	889, 1695
Eam1104I	CTCTTC	2 cut(s)	958, 987
EarI	CTCTTC	2 cut(s)	958, 987
Ecl136II	GAGCTC	1 cut(s)	1703
Eco130I	CCWWGG	2 cut(s)	608, 1692
Eco147I	AGGCCT	1 cut(s)	2117
Eco24I	GRGCYC	3 cut(s)	1023, 1111, 1705
Eco32I	GATATC	1 cut(s)	208
Eco47I	GGWCC	3 cut(s)	384, 1442, 1689
Eco53kI	GAGCTC	1 cut(s)	1703
Eco57I	CTGAAG	5 cut(s)	123, 696, 783, 1929, 2282
Eco81I	CCTNAGG	1 cut(s)	2222
Eco88I	CYCGRG	3 cut(s)	1873, 2502, 2514
Eco91I	GGTNACC	1 cut(s)	2711
EcoICRI	GAGCTC	1 cut(s)	1703
EcoNI	CCTNNNNNAGG	1 cut(s)	2624
EcoO65I	GGTNACC	1 cut(s)	2711
EcoRII	CCWGG	3 cut(s)	1740, 1821, 2088
EcoRV	GATATC	1 cut(s)	208
EcoT14I	CCWWGG	2 cut(s)	608, 1692
EcoT38I	GRGCYC	3 cut(s)	1023, 1111, 1705
ErhI	CCWWGG	2 cut(s)	608, 1692
Esp3I	CGTCTC	2 cut(s)	706, 1249
FaeI	CATG	8 cut(s)	124, 612, 1388, 1631, 1696, 2648, 2720, 2739
FalI	AAGNNNNNCTT	6 cut(s)	701, 733, 1914, 1946, 2008, 2040
FaqI	GGGAC	1 cut(s)	590
FatI	CATG	8 cut(s)	120, 608, 1384, 1627, 1692, 2644, 2716, 2735
FauI	CCCGC	1 cut(s)	1692
FauNDI	CATATG	1 cut(s)	2686
FblI	GTMKAC	2 cut(s)	535, 2817
Fnu4HI	GCNGC	8 cut(s)	98, 1226, 1248, 1281, 1395, 1941, 2508, 2532
FriOI	GRGCYC	3 cut(s)	1023, 1111, 1705
Fsp4HI	GCNGC	8 cut(s)	98, 1226, 1248, 1281, 1395, 1941, 2508, 2532
FspBI	CTAG	7 cut(s)	954, 1284, 1836, 1851, 2169, 2460, 2616
FspI	TGCGCA	1 cut(s)	1540
GlaI	GCGC	2 cut(s)	1540, 2316
GluI	GCNGC	8 cut(s)	98, 1226, 1248, 1281, 1395, 1941, 2508, 2532
GsuI	CTGGAG	5 cut(s)	1241, 1592, 2331, 2380, 2616
HaeIII	GGCC	8 cut(s)	891, 1323, 1546, 1640, 1697, 1807, 2117, 2270
HapII	CCGG	1 cut(s)	303
HgaI	GACGC	2 cut(s)	619, 723
HhaI	GCGC	2 cut(s)	1541, 2317
Hin1II	CATG	8 cut(s)	124, 612, 1388, 1631, 1696, 2648, 2720, 2739
Hin6I	GCGC	2 cut(s)	1539, 2315
HinP1I	GCGC	2 cut(s)	1539, 2315
HincII	GTYRAC	1 cut(s)	2757
HindII	GTYRAC	1 cut(s)	2757
HindIII	AAGCTT	2 cut(s)	318, 494
HpaII	CCGG	1 cut(s)	303
HphI	GGTGA	5 cut(s)	84, 880, 1447, 2485, 2723
Hpy166II	GTNNAC	6 cut(s)	536, 1217, 2371, 2653, 2757, 2818
Hpy8I	GTNNAC	6 cut(s)	536, 1217, 2371, 2653, 2757, 2818
Hpy99I	CGWCG	2 cut(s)	78, 2160
HpyCH4III	ACNGT	6 cut(s)	809, 868, 1090, 1574, 1718, 2108
HpyCH4IV	ACGT	5 cut(s)	538, 700, 753, 1258, 2158
HpySE526I	ACGT	5 cut(s)	538, 700, 753, 1258, 2158
Hsp92II	CATG	8 cut(s)	124, 612, 1388, 1631, 1696, 2648, 2720, 2739
HspAI	GCGC	2 cut(s)	1539, 2315
Kpn2I	TCCGGA	1 cut(s)	302
KspI	CCGCGG	1 cut(s)	1688
Kzo9I	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
LmnI	GCTCC	8 cut(s)	442, 1189, 1222, 1596, 1708, 1771, 2230, 2312
Lsp1109I	GCAGC	8 cut(s)	84, 1234, 1237, 1292, 1381, 1927, 2494, 2518
MaeI	CTAG	7 cut(s)	954, 1284, 1836, 1851, 2169, 2460, 2616
MaeII	ACGT	5 cut(s)	538, 700, 753, 1258, 2158
MalI	GATC	8 cut(s)	301, 804, 1377, 1453, 1725, 2133, 2436, 2543
MboI	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
MfeI	CAATTG	2 cut(s)	1155, 2199
MflI	RGATCY	2 cut(s)	299, 1375
MhlI	GDGCHC	7 cut(s)	400, 1023, 1111, 1219, 1685, 1705, 2407
MlsI	TGGCCA	2 cut(s)	891, 1697
MluNI	TGGCCA	2 cut(s)	891, 1697
MlyI	GAGTC	3 cut(s)	612, 1493, 2526
MmeI	TCCRAC	3 cut(s)	702, 2208, 2337
Mox20I	TGGCCA	2 cut(s)	891, 1697
MroI	TCCGGA	1 cut(s)	302
MroXI	GAANNNNTTC	3 cut(s)	684, 1852, 2724
MscI	TGGCCA	2 cut(s)	891, 1697
MseI	TTAA	7 cut(s)	492, 498, 708, 1113, 1974, 2190, 2658
MslI	CAYNNNNRTG	2 cut(s)	2721, 2749
Msp20I	TGGCCA	2 cut(s)	891, 1697
MspA1I	CMGCKG	2 cut(s)	97, 1687
MspCI	CTTAAG	1 cut(s)	707
MspI	CCGG	1 cut(s)	303
MspR9I	CCNGG	3 cut(s)	1742, 1823, 2090
MunI	CAATTG	2 cut(s)	1155, 2199
MvaI	CCWGG	3 cut(s)	1742, 1823, 2090
MvnI	CGCG	2 cut(s)	1687, 1722
NcoI	CCATGG	2 cut(s)	608, 1692
NdeI	CATATG	1 cut(s)	2686
NdeII	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
NlaIII	CATG	8 cut(s)	124, 612, 1388, 1631, 1696, 2648, 2720, 2739
NlaIV	GGNNCC	6 cut(s)	301, 397, 1443, 1641, 1682, 2232
NmuCI	GTSAC	5 cut(s)	631, 1090, 1459, 1754, 2711
NruI	TCGCGA	1 cut(s)	1722
NsbI	TGCGCA	1 cut(s)	1540
PaeR7I	CTCGAG	2 cut(s)	1873, 2502
PaqCI	CACCTGC	1 cut(s)	415
PceI	AGGCCT	1 cut(s)	2117
PdmI	GAANNNNTTC	3 cut(s)	684, 1852, 2724
PfoI	TCCNGGA	1 cut(s)	2088
PkrI	GCNGC	8 cut(s)	99, 1227, 1249, 1282, 1396, 1942, 2509, 2533
PleI	GAGTC	3 cut(s)	611, 1493, 2525
PpsI	GAGTC	3 cut(s)	611, 1493, 2525
Psp124BI	GAGCTC	1 cut(s)	1705
Psp6I	CCWGG	3 cut(s)	1740, 1821, 2088
PspEI	GGTNACC	1 cut(s)	2711
PspGI	CCWGG	3 cut(s)	1740, 1821, 2088
PspN4I	GGNNCC	6 cut(s)	301, 397, 1443, 1641, 1682, 2232
PspPI	GGNCC	6 cut(s)	384, 1321, 1442, 1544, 1639, 1689
PspXI	VCTCGAGB	1 cut(s)	1873
PstI	CTGCAG	2 cut(s)	2041, 2428
PstNI	CAGNNNCTG	2 cut(s)	1247, 1424
PsuI	RGATCY	2 cut(s)	299, 1375
RruI	TCGCGA	1 cut(s)	1722
RsaI	GTAC	6 cut(s)	424, 1027, 1571, 2110, 2331, 2487
RsaNI	GTAC	6 cut(s)	423, 1026, 1570, 2109, 2330, 2486
RseI	CAYNNNNRTG	2 cut(s)	2721, 2749
SacI	GAGCTC	1 cut(s)	1705
SacII	CCGCGG	1 cut(s)	1688
SaqAI	TTAA	7 cut(s)	492, 498, 708, 1113, 1974, 2190, 2658
SatI	GCNGC	8 cut(s)	98, 1226, 1248, 1281, 1395, 1941, 2508, 2532
Sau3AI	GATC	8 cut(s)	299, 802, 1375, 1451, 1723, 2131, 2434, 2541
Sau96I	GGNCC	6 cut(s)	384, 1321, 1442, 1544, 1639, 1689
ScaI	AGTACT	1 cut(s)	1027
SchI	GAGTC	3 cut(s)	612, 1493, 2526
ScrFI	CCNGG	3 cut(s)	1742, 1823, 2090
SduI	GDGCHC	7 cut(s)	400, 1023, 1111, 1219, 1685, 1705, 2407
SfcI	CTRYAG	2 cut(s)	2037, 2424
Sfr274I	CTCGAG	2 cut(s)	1873, 2502
Sfr303I	CCGCGG	1 cut(s)	1688
SgrBI	CCGCGG	1 cut(s)	1688
SinI	GGWCC	3 cut(s)	384, 1442, 1689
SlaI	CTCGAG	2 cut(s)	1873, 2502
SmiMI	CAYNNNNRTG	2 cut(s)	2721, 2749
SmlI	CTYRAG	4 cut(s)	707, 1781, 1873, 2502
SmoI	CTYRAG	4 cut(s)	707, 1781, 1873, 2502
SpeI	ACTAGT	1 cut(s)	1850
SseBI	AGGCCT	1 cut(s)	2117
SsiI	CCGC	5 cut(s)	95, 1685, 1687, 2341, 2534
SspMI	CTAG	7 cut(s)	954, 1284, 1836, 1851, 2169, 2460, 2616
SstI	GAGCTC	1 cut(s)	1705
StuI	AGGCCT	1 cut(s)	2117
StyD4I	CCNGG	3 cut(s)	1740, 1821, 2088
StyI	CCWWGG	2 cut(s)	608, 1692
TaaI	ACNGT	6 cut(s)	809, 868, 1090, 1574, 1718, 2108
TaiI	ACGT	5 cut(s)	541, 703, 756, 1261, 2161
TaqI	TCGA	9 cut(s)	105, 112, 340, 763, 1429, 1497, 1874, 2503, 2608
TaqII	GACCGA	1 cut(s)	1444
TatI	WGTACW	3 cut(s)	1025, 2108, 2329
Tru1I	TTAA	7 cut(s)	492, 498, 708, 1113, 1974, 2190, 2658
Tru9I	TTAA	7 cut(s)	492, 498, 708, 1113, 1974, 2190, 2658
TscAI	CASTG	9 cut(s)	34, 640, 814, 904, 1224, 1616, 2269, 2407, 2767
TseFI	GTSAC	5 cut(s)	631, 1090, 1459, 1754, 2711
TseI	GCWGC	8 cut(s)	97, 1225, 1247, 1280, 1394, 1940, 2507, 2531
Tsp45I	GTSAC	5 cut(s)	631, 1090, 1459, 1754, 2711
TspGWI	ACGGA	2 cut(s)	2022, 2388
TspRI	CASTG	9 cut(s)	34, 640, 814, 904, 1224, 1616, 2269, 2407, 2767
Vha464I	CTTAAG	1 cut(s)	707
VneI	GTGCAC	1 cut(s)	1215
VpaK11BI	GGWCC	3 cut(s)	384, 1442, 1689
XagI	CCTNNNNNAGG	1 cut(s)	2624
XapI	RAATTY	4 cut(s)	1879, 2122, 2323, 2554
XbaI	TCTAGA	1 cut(s)	953
XhoI	CTCGAG	2 cut(s)	1873, 2502
XmiI	GTMKAC	2 cut(s)	535, 2817
XmnI	GAANNNNTTC	3 cut(s)	684, 1852, 2724
XspI	CTAG	7 cut(s)	954, 1284, 1836, 1851, 2169, 2460, 2616
ZrmI	AGTACT	1 cut(s)	1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.