Rh3DG082900

Kelch motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0008868
Physical Location & Seq
Reverse (-)
6386839 .. 6391130
4292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG082900.1

Sequence Viewer

Length: 1992 bp
ATGGGGTCTTTGGGAGGTGAAGAAGCTACCAGGAAGAAGGCAATGTGGCTCTACCCAAAGCTTGTGGGATTCAATCCTTCTGAAAGATGGGGGCACTCTGCTTGTTATTTTCAAGGGAATATGTATGTTTTTGGGGGATGTTCTGGAGGTATGCATTACAGTGATGTTCTTGTGCTTAATTATGAAACGATGGCCTGGAACACTCTTGTAACAACTGGTAAAGGGCCTGGTCCTAGGGATAGCCACAGTACCGTTGTTCTGGGTAATAATATGATAGTTTTTGGGGGTACAAGTGGCTCCAAGAAGTGTAATGATCTTCACATTTTAAATCTGATGACCAAAGAATGGACTCGACCAGAATGTTGCGGAACTCCACCTTCGCCCCGAGAAAGTCATTCTGCCACGCTTGTGGATGATGAAGAATTAGTGGTTTTTGGGGGAAGTGGAGAAGGTCAAAGCTTGAATGATCTGCATGTTCTAGACCTCACAACCATGAGATGGACTTCCCCTGAGGTGAAGGGTGATATTCCTGTTCCTAGAGACAGTCATAGTGCTATTGCAATAGGAAAGAAGATGCTTGTGTACGGTGGTGACCGTGGTGATAGGTATTATGGTGATGTTGATATGCTTGACATGGACACAATGACTTGGTCAAGGTTGGCTGTTCAAGGATCTTCACCCGGTGGCAGGGCTGGTCATGCAGCTGTGAGTATTGGCACAAAGGTCTATGTCATTGGAGGGGTTGGACACAAACGGTACTACAATGATGCATGGGTCCTGGATTCAAGTACTTGTTCATGGACCCAACTCGATGTATGCGGCCAACTGCCACAAGGGAGGTTCTCTCACACTGCTGTTGTTACCGACTCTGACATTGCCGTCTATGGAGGGTGTGGGGAGGATGATCGTCCTCTCGATGAGTTGTTGGTGTTGCAGCTTGGAACAGAACTGCCAAATGAGTGTTACAATGTTCCTATGTGCAAAATTTTTGGAAGCCATTTAAACCAAGAGAGGAGAAGGTTCTCTAGGGGAGCTGAATTTAACACGAATGTGAAACCTATGCTTATGGGGAATCCTGTAGTAGTAAGACAGACATCCAAGAGATCAGAATCAGAAACAAAGCGAACCTCTTTAAAATCAGATACTCTGCATCCAAAAAGGAGAAGAAGTACCACTTCGAAAGCATGGGATGTTGAATCAGAACAAGAAGAGCATTCTCTATCTCTGTCCCAGCATTCATCATCATCTCACTCAGACCAAGAACAGCAACAGACCCCAACTCCCAAACTTGAAGATTCTGCCCCACCTTCTAAAGGTTTTCATATCTTTAAGCAATTAAATCAGAGTCCAAACATAAAGATCTTAGAAATTCCAGCCAAAGATCTCAGAATTTCCACGCAAAAAACTCCAGAGGAACTTAGCCACTTATTAGGAGCACATCAAATGAAAGCGAGACGAGAACAGTATCTTCATGGTAGACCAAGCATGCACTTTCAAGCTGCAGGGCCTATGCAGAACCTGATTGGTGCTGAGGTCCATGGCAAAGTTGATGGAGCATTTGACTCCGGTTTCCTAATGACTGCAACTGTTAACGGAAATATATATAGAGGGGTCTTATTTGCACCGGGAGCTGGGATCGTCCCAAGAATGTCAATTCTTCCACAAAATTCTTCATCTTTAACAAGTCAAACTGGCAATCTGGGACCTGGAATCATTGGAAGAGGGTCAATTGTTCCACAAAGTCAAATAGCCAATGCTGTGACACAACCCTTTGCAAACTCAAATCATGCAGAGCCAGCCTCAAAGCTATCCGAGCAGCCAATGAAGAATTCCCTACCAGGGTCTAGTCTAGGCCTCAGACAACCTCAGGTAGCTCGGCCATTTTCAGGAGTTAGTGCTTCATCTTTAGTCAGAGAACCTAATCACCGAAATGATTTTCAAGGTCTGATTCTAACACTCGGAGGATCAGGAAGTGGCTCTGGTGGTTTGTAG

Protein Analysis

663

Amino Acids

71.87

Weight (kDa)

7.35

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_HCF PF13854 12 - 97 1.1e-12 Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 14 - 197 3.7e-60 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 14 - 150 2.8e-34 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 53 - 197 1.5e-22 Attractin/LZTR1 beta-propeller
Beta-prop_TYW4 PF13418 76 - 158 7.3e-06 tRNA wybutosine-synthesizing protein 4, beta-propeller
Kelch_1 PF01344 78 - 118 1.6e-06 Kelch motif
Kelch_HCF PF13854 104 - 197 4.8e-18 Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 141 - 297 6.8e-50 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 143 - 299 6.1e-23 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 152 - 315 5.9e-36 FBX42, beta-propeller domain
NANM PF24996 175 - 299 3.7e-06 N-acetylneuraminate epimerase
Kelch_HCF PF13854 191 - 247 1.7e-09 Host cell factor, Kelch-repeats domain
Beta-prop_TYW4 PF13418 227 - 347 7.3e-06 tRNA wybutosine-synthesizing protein 4, beta-propeller
Kelch_1 PF01344 230 - 270 1.7e-10 Kelch motif
Kelch_FKB95 PF25210 231 - 303 3.7e-06 FKB95, Kelch-repeats domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 878
AccB7I CCANNNNNTGG 2 cut(s) 345, 498
AccI GTMKAC 1 cut(s) 1477
AciI CCGC 2 cut(s) 366, 819
AclWI GGATC 3 cut(s) 679, 1643, 1972
AcoI YGGCCR 2 cut(s) 820, 1877
AcsI RAATTY 6 cut(s) 984, 1037, 1368, 1389, 1666, 1828
AdeI CACNNNGTG 1 cut(s) 683
AfaI GTAC 6 cut(s) 250, 289, 584, 758, 790, 1171
AfiI CCNNNNNNNGG 7 cut(s) 345, 498, 687, 1313, 1631, 1839, 1886
AgsI TTSAA 9 cut(s) 73, 113, 463, 668, 786, 1196, 1292, 1496, 1940
AjnI CCWGG 6 cut(s) 29, 194, 226, 777, 1705, 1837
AjuI GAANNNNNNNTTGG 2 cut(s) 1813, 1845
AleI CACNNNNGTG 2 cut(s) 407, 1049
Alw21I GWGCWC 1 cut(s) 1438
Alw26I GTCTC 2 cut(s) 534, 1447
AlwI GGATC 3 cut(s) 679, 1643, 1972
AlwNI CAGNNNCTG 1 cut(s) 1519
Ama87I CYCGRG 1 cut(s) 384
AoxI GGCC 6 cut(s) 192, 224, 820, 1505, 1852, 1877
ApeKI GCWGC 4 cut(s) 701, 934, 1499, 1816
ApoI RAATTY 6 cut(s) 984, 1037, 1368, 1389, 1666, 1828
AspA2I CCTAGG 1 cut(s) 233
AspS9I GGNCC 7 cut(s) 224, 230, 775, 801, 1505, 1534, 1703
AsuC2I CCSGG 2 cut(s) 681, 1626
AsuHPI GGTGA 8 cut(s) 29, 526, 533, 602, 611, 626, 669, 1916
AsuII TTCGAA 1 cut(s) 1178
AvaI CYCGRG 1 cut(s) 384
AvaII GGWCC 5 cut(s) 230, 775, 801, 1534, 1703
AvrII CCTAGG 1 cut(s) 233
AxyI CCTNAGG 2 cut(s) 510, 1866
BaeGI GKGCMC 1 cut(s) 96
Bbv12I GWGCWC 1 cut(s) 1438
BbvCI CCTCAGC 1 cut(s) 1530
BbvI GCAGC 4 cut(s) 713, 946, 1486, 1828
BccI CCATC 4 cut(s) 81, 184, 492, 1544
BceAI ACGGC 1 cut(s) 863
BciT130I CCWGG 6 cut(s) 31, 196, 228, 779, 1707, 1839
BcnI CCSGG 2 cut(s) 681, 1626
BcoDI GTCTC 2 cut(s) 534, 1447
BfaI CTAG 6 cut(s) 234, 479, 537, 1026, 1845, 1850
BfmI CTRYAG 2 cut(s) 1077, 1500
BglII AGATCT 2 cut(s) 1359, 1381
BisI GCNGC 5 cut(s) 702, 820, 935, 1500, 1817
BlnI CCTAGG 1 cut(s) 233
BlsI GCNGC 5 cut(s) 703, 821, 936, 1501, 1818
BmcAI AGTACT 1 cut(s) 790
Bme1390I CCNGG 8 cut(s) 31, 196, 228, 681, 779, 1626, 1707, 1839
Bme18I GGWCC 5 cut(s) 230, 775, 801, 1534, 1703
BmeT110I CYCGRG 1 cut(s) 384
BmgT120I GGNCC 7 cut(s) 224, 230, 775, 801, 1505, 1534, 1703
BmiI GGNNCC 4 cut(s) 298, 776, 803, 1704
BmrFI CCNGG 8 cut(s) 31, 196, 228, 681, 779, 1626, 1707, 1839
BmsI GCATC 3 cut(s) 564, 757, 1159
BplI GAGNNNNNCTC 4 cut(s) 829, 861, 1784, 1816
BpmI CTGGAG 2 cut(s) 165, 1392
Bpu10I CCTNAGC 1 cut(s) 1530
Bpu14I TTCGAA 1 cut(s) 1178
BpuMI CCSGG 2 cut(s) 681, 1626
BsaBI GATNNNNATC 1 cut(s) 1108
BsaJI CCNNGG 4 cut(s) 233, 595, 1537, 1838
BsaWI WCCGGW 1 cut(s) 1565
BsaXI ACNNNNNCTCC 4 cut(s) 1153, 1183, 1264, 1294
Bsc4I CCNNNNNNNGG 7 cut(s) 345, 498, 687, 1313, 1631, 1839, 1886
Bse1I ACTGG 2 cut(s) 220, 1696
Bse21I CCTNAGG 2 cut(s) 510, 1866
Bse3DI GCAATG 2 cut(s) 48, 873
Bse8I GATNNNNATC 1 cut(s) 1108
BseBI CCWGG 6 cut(s) 31, 196, 228, 779, 1707, 1839
BseDI CCNNGG 4 cut(s) 233, 595, 1537, 1838
BseGI GGATG 6 cut(s) 143, 418, 907, 1094, 1150, 1195
BseJI GATNNNNATC 1 cut(s) 1108
BseLI CCNNNNNNNGG 7 cut(s) 345, 498, 687, 1313, 1631, 1839, 1886
BseMI GCAATG 2 cut(s) 48, 873
BseMII CTCAG 6 cut(s) 501, 1266, 1399, 1521, 1870, 1880
BseNI ACTGG 2 cut(s) 220, 1696
BseRI GAGGAG 1 cut(s) 1027
BseSI GKGCMC 1 cut(s) 96
BseXI GCAGC 4 cut(s) 713, 946, 1486, 1828
BseYI CCCAGC 2 cut(s) 1230, 1631
BshFI GGCC 6 cut(s) 194, 226, 822, 1507, 1854, 1879
BsiHKAI GWGCWC 1 cut(s) 1438
BsiHKCI CYCGRG 1 cut(s) 384
BsiSI CCGG 3 cut(s) 681, 1566, 1625
BslFI GGGAC 3 cut(s) 1213, 1625, 1716
BslI CCNNNNNNNGG 7 cut(s) 345, 498, 687, 1313, 1631, 1839, 1886
BsmAI GTCTC 2 cut(s) 534, 1447
BsmBI CGTCTC 1 cut(s) 1447
BsmFI GGGAC 3 cut(s) 1213, 1625, 1716
BsmI GAATGC 2 cut(s) 1213, 1234
BsnI GGCC 6 cut(s) 194, 226, 822, 1507, 1854, 1879
BsoBI CYCGRG 1 cut(s) 384
Bsp119I TTCGAA 1 cut(s) 1178
Bsp1286I GDGCHC 2 cut(s) 96, 1438
Bsp143I GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
Bsp19I CCATGG 1 cut(s) 1537
BspACI CCGC 2 cut(s) 366, 819
BspANI GGCC 6 cut(s) 194, 226, 822, 1507, 1854, 1879
BspCNI CTCAG 6 cut(s) 502, 1265, 1398, 1522, 1869, 1879
BspLI GGNNCC 4 cut(s) 298, 776, 803, 1704
BspMAI CTGCAG 1 cut(s) 1504
BspPI GGATC 3 cut(s) 679, 1643, 1972
BspQI GCTCTTC 1 cut(s) 1203
BspT104I TTCGAA 1 cut(s) 1178
BsrDI GCAATG 2 cut(s) 48, 873
BsrI ACTGG 2 cut(s) 220, 1696
BssECI CCNNGG 4 cut(s) 233, 595, 1537, 1838
BssMI GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
BssT1I CCWWGG 2 cut(s) 233, 1537
Bst2UI CCWGG 6 cut(s) 31, 196, 228, 779, 1707, 1839
Bst4CI ACNGT 9 cut(s) 161, 248, 253, 545, 587, 596, 756, 1464, 1588
Bst6I CTCTTC 2 cut(s) 1203, 1714
BstBI TTCGAA 1 cut(s) 1178
BstC8I GCNNGC 2 cut(s) 1487, 1797
BstDEI CTNAG 8 cut(s) 510, 1252, 1363, 1385, 1418, 1530, 1856, 1866
BstDSI CCRYGG 2 cut(s) 595, 1537
BstEII GGTNACC 1 cut(s) 590
BstENI CCTNNNNNAGG 1 cut(s) 1311
BstF5I GGATG 6 cut(s) 143, 418, 907, 1094, 1150, 1195
BstKTI GATC 9 cut(s) 316, 469, 674, 907, 1106, 1362, 1384, 1638, 1967
BstMAI GTCTC 2 cut(s) 534, 1447
BstMBI GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
BstMWI GCNNNNNNNGC 4 cut(s) 698, 1628, 1796, 1813
BstNI CCWGG 6 cut(s) 31, 196, 228, 779, 1707, 1839
BstNSI RCATGY 2 cut(s) 476, 1489
BstPI GGTNACC 1 cut(s) 590
BstSCI CCNGG 8 cut(s) 29, 194, 226, 679, 777, 1624, 1705, 1837
BstSFI CTRYAG 2 cut(s) 1077, 1500
BstSLI GKGCMC 1 cut(s) 96
BstV1I GCAGC 4 cut(s) 713, 946, 1486, 1828
BstX2I RGATCY 3 cut(s) 671, 1359, 1381
BstXI CCANNNNNNTGG 1 cut(s) 409
BstYI RGATCY 3 cut(s) 671, 1359, 1381
Bsu36I CCTNAGG 2 cut(s) 510, 1866
BsuRI GGCC 6 cut(s) 194, 226, 822, 1507, 1854, 1879
BtgI CCRYGG 2 cut(s) 595, 1537
BtsCI GGATG 6 cut(s) 143, 418, 907, 1094, 1150, 1195
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 2 cut(s) 166, 849
Cac8I GCNNGC 2 cut(s) 1487, 1797
CaiI CAGNNNCTG 1 cut(s) 1519
Cfr13I GGNCC 7 cut(s) 224, 230, 775, 801, 1505, 1534, 1703
Csp6I GTAC 6 cut(s) 249, 288, 583, 757, 789, 1170
CspCI CAANNNNNGTGG 2 cut(s) 45, 80
CviQI GTAC 6 cut(s) 249, 288, 583, 757, 789, 1170
DdeI CTNAG 8 cut(s) 510, 1252, 1363, 1385, 1418, 1530, 1856, 1866
DpnI GATC 9 cut(s) 315, 468, 673, 906, 1105, 1361, 1383, 1637, 1966
DpnII GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
DraI TTTAAA 3 cut(s) 327, 1002, 1134
DraIII CACNNNGTG 1 cut(s) 683
DrdI GACNNNNNNGTC 1 cut(s) 878
DseDI GACNNNNNNGTC 1 cut(s) 878
EaeI YGGCCR 2 cut(s) 820, 1877
Eam1104I CTCTTC 2 cut(s) 1203, 1714
EarI CTCTTC 2 cut(s) 1203, 1714
Eco130I CCWWGG 2 cut(s) 233, 1537
Eco147I AGGCCT 1 cut(s) 1854
Eco47I GGWCC 5 cut(s) 230, 775, 801, 1534, 1703
Eco81I CCTNAGG 2 cut(s) 510, 1866
Eco88I CYCGRG 1 cut(s) 384
Eco91I GGTNACC 1 cut(s) 590
EcoNI CCTNNNNNAGG 1 cut(s) 1311
EcoO109I RGGNCCY 4 cut(s) 224, 775, 1505, 1703
EcoO65I GGTNACC 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 1828
EcoRII CCWGG 6 cut(s) 29, 194, 226, 777, 1705, 1837
EcoT14I CCWWGG 2 cut(s) 233, 1537
EcoT22I ATGCAT 2 cut(s) 156, 772
ErhI CCWWGG 2 cut(s) 233, 1537
Esp3I CGTCTC 1 cut(s) 1447
FalI AAGNNNNNCTT 2 cut(s) 1159, 1191
FaqI GGGAC 3 cut(s) 1213, 1625, 1716
FblI GTMKAC 1 cut(s) 1477
Fnu4HI GCNGC 5 cut(s) 702, 820, 935, 1500, 1817
FokI GGATG 6 cut(s) 150, 425, 914, 1081, 1137, 1202
Fsp4HI GCNGC 5 cut(s) 702, 820, 935, 1500, 1817
FspBI CTAG 6 cut(s) 234, 479, 537, 1026, 1845, 1850
GluI GCNGC 5 cut(s) 702, 820, 935, 1500, 1817
GsaI CCCAGC 2 cut(s) 1234, 1635
GsuI CTGGAG 2 cut(s) 165, 1392
HaeIII GGCC 6 cut(s) 194, 226, 822, 1507, 1854, 1879
HapII CCGG 3 cut(s) 681, 1566, 1625
HincII GTYRAC 1 cut(s) 1591
HindII GTYRAC 1 cut(s) 1591
HindIII AAGCTT 2 cut(s) 59, 457
HpaI GTTAAC 1 cut(s) 1591
HpaII CCGG 3 cut(s) 681, 1566, 1625
HphI GGTGA 8 cut(s) 29, 526, 533, 602, 611, 626, 669, 1916
Hpy166II GTNNAC 3 cut(s) 583, 1478, 1591
Hpy188III TCNNGA 6 cut(s) 144, 479, 914, 1409, 1887, 1968
Hpy8I GTNNAC 3 cut(s) 583, 1478, 1591
HpyAV CCTTC 7 cut(s) 31, 87, 387, 443, 511, 1011, 1317
HpyCH4III ACNGT 9 cut(s) 161, 248, 253, 545, 587, 596, 756, 1464, 1588
HpyF10VI GCNNNNNNNGC 4 cut(s) 698, 1628, 1796, 1813
HpyF3I CTNAG 8 cut(s) 510, 1252, 1363, 1385, 1418, 1530, 1856, 1866
KspAI GTTAAC 1 cut(s) 1591
Kzo9I GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
LguI GCTCTTC 1 cut(s) 1203
LmnI GCTCC 5 cut(s) 302, 1031, 1433, 1553, 1628
Lsp1109I GCAGC 4 cut(s) 713, 946, 1486, 1828
LweI GCATC 3 cut(s) 564, 757, 1159
MaeI CTAG 6 cut(s) 234, 479, 537, 1026, 1845, 1850
MaeIII GTNAC 5 cut(s) 208, 590, 859, 962, 1759
MalI GATC 9 cut(s) 315, 468, 673, 906, 1105, 1361, 1383, 1637, 1966
MboI GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
MfeI CAATTG 1 cut(s) 1728
MflI RGATCY 3 cut(s) 671, 1359, 1381
MhlI GDGCHC 2 cut(s) 96, 1438
MlyI GAGTC 4 cut(s) 343, 860, 1354, 1556
MmeI TCCRAC 1 cut(s) 724
Mph1103I ATGCAT 2 cut(s) 156, 772
MseI TTAA 9 cut(s) 177, 326, 1001, 1041, 1133, 1329, 1337, 1590, 1679
MslI CAYNNNNRTG 5 cut(s) 159, 407, 491, 1049, 1929
MspA1I CMGCKG 1 cut(s) 704
MspI CCGG 3 cut(s) 681, 1566, 1625
MspR9I CCNGG 8 cut(s) 31, 196, 228, 681, 779, 1626, 1707, 1839
MunI CAATTG 1 cut(s) 1728
Mva1269I GAATGC 2 cut(s) 1213, 1234
MvaI CCWGG 6 cut(s) 31, 196, 228, 779, 1707, 1839
MwoI GCNNNNNNNGC 4 cut(s) 698, 1628, 1796, 1813
NciI CCSGG 2 cut(s) 681, 1626
NcoI CCATGG 1 cut(s) 1537
NdeII GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
NlaIV GGNNCC 4 cut(s) 298, 776, 803, 1704
NmeAIII GCCGAG 1 cut(s) 1855
NmuCI GTSAC 2 cut(s) 590, 1759
NsiI ATGCAT 2 cut(s) 156, 772
NspI RCATGY 2 cut(s) 476, 1489
NspV TTCGAA 1 cut(s) 1178
OliI CACNNNNGTG 2 cut(s) 407, 1049
PaeI GCATGC 1 cut(s) 1489
PceI AGGCCT 1 cut(s) 1854
PciSI GCTCTTC 1 cut(s) 1203
PctI GAATGC 2 cut(s) 1213, 1234
PfeI GAWTC 8 cut(s) 69, 782, 1072, 1109, 1196, 1295, 1710, 1948
PflFI GACNNNGTC 1 cut(s) 649
PflMI CCANNNNNTGG 2 cut(s) 345, 498
PfoI TCCNGGA 1 cut(s) 777
PkrI GCNGC 5 cut(s) 703, 821, 936, 1501, 1818
PleI GAGTC 4 cut(s) 343, 860, 1353, 1556
PpsI GAGTC 4 cut(s) 343, 860, 1353, 1556
PpuMI RGGWCCY 2 cut(s) 775, 1703
Psp5II RGGWCCY 2 cut(s) 775, 1703
Psp6I CCWGG 6 cut(s) 29, 194, 226, 777, 1705, 1837
PspEI GGTNACC 1 cut(s) 590
PspFI CCCAGC 2 cut(s) 1230, 1631
PspGI CCWGG 6 cut(s) 29, 194, 226, 777, 1705, 1837
PspN4I GGNNCC 4 cut(s) 298, 776, 803, 1704
PspPI GGNCC 7 cut(s) 224, 230, 775, 801, 1505, 1534, 1703
PspPPI RGGWCCY 2 cut(s) 775, 1703
PstI CTGCAG 1 cut(s) 1504
PstNI CAGNNNCTG 1 cut(s) 1519
PsuI RGATCY 3 cut(s) 671, 1359, 1381
PsyI GACNNNGTC 1 cut(s) 649
PvuII CAGCTG 1 cut(s) 704
RsaI GTAC 6 cut(s) 250, 289, 584, 758, 790, 1171
RsaNI GTAC 6 cut(s) 249, 288, 583, 757, 789, 1170
RseI CAYNNNNRTG 5 cut(s) 159, 407, 491, 1049, 1929
SapI GCTCTTC 1 cut(s) 1203
SaqAI TTAA 9 cut(s) 177, 326, 1001, 1041, 1133, 1329, 1337, 1590, 1679
SatI GCNGC 5 cut(s) 702, 820, 935, 1500, 1817
Sau3AI GATC 9 cut(s) 313, 466, 671, 904, 1103, 1359, 1381, 1635, 1964
Sau96I GGNCC 7 cut(s) 224, 230, 775, 801, 1505, 1534, 1703
ScaI AGTACT 1 cut(s) 790
SchI GAGTC 4 cut(s) 343, 860, 1354, 1556
ScrFI CCNGG 8 cut(s) 31, 196, 228, 681, 779, 1626, 1707, 1839
SduI GDGCHC 2 cut(s) 96, 1438
SfaNI GCATC 3 cut(s) 564, 757, 1159
SfcI CTRYAG 2 cut(s) 1077, 1500
SfuI TTCGAA 1 cut(s) 1178
SinI GGWCC 5 cut(s) 230, 775, 801, 1534, 1703
SmiMI CAYNNNNRTG 5 cut(s) 159, 407, 491, 1049, 1929
SphI GCATGC 1 cut(s) 1489
SseBI AGGCCT 1 cut(s) 1854
SsiI CCGC 2 cut(s) 366, 819
SspMI CTAG 6 cut(s) 234, 479, 537, 1026, 1845, 1850
StuI AGGCCT 1 cut(s) 1854
StyD4I CCNGG 8 cut(s) 29, 194, 226, 679, 777, 1624, 1705, 1837
StyI CCWWGG 2 cut(s) 233, 1537
TaaI ACNGT 9 cut(s) 161, 248, 253, 545, 587, 596, 756, 1464, 1588
TaqI TCGA 4 cut(s) 352, 810, 915, 1178
TatI WGTACW 1 cut(s) 788
TauI GCSGC 1 cut(s) 822
TfiI GAWTC 8 cut(s) 69, 782, 1072, 1109, 1196, 1295, 1710, 1948
Tru1I TTAA 9 cut(s) 177, 326, 1001, 1041, 1133, 1329, 1337, 1590, 1679
Tru9I TTAA 9 cut(s) 177, 326, 1001, 1041, 1133, 1329, 1337, 1590, 1679
TscAI CASTG 2 cut(s) 166, 856
TseFI GTSAC 2 cut(s) 590, 1759
TseI GCWGC 4 cut(s) 701, 934, 1499, 1816
Tsp45I GTSAC 2 cut(s) 590, 1759
TspGWI ACGGA 1 cut(s) 1608
TspRI CASTG 2 cut(s) 166, 856
Tth111I GACNNNGTC 1 cut(s) 649
Van91I CCANNNNNTGG 2 cut(s) 345, 498
VpaK11BI GGWCC 5 cut(s) 230, 775, 801, 1534, 1703
XagI CCTNNNNNAGG 1 cut(s) 1311
XapI RAATTY 6 cut(s) 984, 1037, 1368, 1389, 1666, 1828
XbaI TCTAGA 1 cut(s) 478
XceI RCATGY 2 cut(s) 476, 1489
XmaJI CCTAGG 1 cut(s) 233
XmiI GTMKAC 1 cut(s) 1477
XspI CTAG 6 cut(s) 234, 479, 537, 1026, 1845, 1850
ZrmI AGTACT 1 cut(s) 790
Zsp2I ATGCAT 2 cut(s) 156, 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.