Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19580 |
| pyrus_communis | pycom12g21330 |
| rosa_laevigata | RLG00000019785 |
| rosa_multiflora | Rmu_sc0000329.1_g000015 Rmu_sc0002451.1_g000012 Rmu_sc0002451.1_g000013 Rmu_sc0027429.1_g000001 |
| rosa_samantha | Rh2CG421300 Rh4CG122800 Rh4DG108400 Rh5BG315200 Rh6AG163300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 484 |
| AciI | CCGC | 3 cut(s) | 119, 125, 447 |
| AcuI | CTGAAG | 1 cut(s) | 543 |
| AfaI | GTAC | 2 cut(s) | 397, 626 |
| AfeI | AGCGCT | 1 cut(s) | 179 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 248, 494 |
| AflIII | ACRYGT | 1 cut(s) | 317 |
| AgsI | TTSAA | 4 cut(s) | 196, 402, 552, 669 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 321 |
| AjnI | CCWGG | 2 cut(s) | 28, 351 |
| AluBI | AGCT | 3 cut(s) | 76, 206, 236 |
| AluI | AGCT | 3 cut(s) | 76, 206, 236 |
| Alw21I | GWGCWC | 2 cut(s) | 208, 338 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 348 |
| Aor51HI | AGCGCT | 1 cut(s) | 179 |
| AoxI | GGCC | 1 cut(s) | 78 |
| ApeKI | GCWGC | 3 cut(s) | 407, 470, 503 |
| AspLEI | GCGC | 1 cut(s) | 180 |
| AspS9I | GGNCC | 1 cut(s) | 530 |
| AsuHPI | GGTGA | 1 cut(s) | 219 |
| AvaII | GGWCC | 1 cut(s) | 530 |
| BanI | GGYRCC | 1 cut(s) | 484 |
| BanII | GRGCYC | 1 cut(s) | 208 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 608, 640 |
| Bbv12I | GWGCWC | 2 cut(s) | 208, 338 |
| BbvI | GCAGC | 3 cut(s) | 419, 482, 490 |
| BccI | CCATC | 3 cut(s) | 154, 238, 448 |
| BciT130I | CCWGG | 2 cut(s) | 30, 353 |
| BfoI | RGCGCY | 1 cut(s) | 181 |
| BisI | GCNGC | 4 cut(s) | 126, 408, 471, 504 |
| BlsI | GCNGC | 4 cut(s) | 127, 409, 472, 505 |
| Bme1390I | CCNGG | 2 cut(s) | 30, 353 |
| Bme18I | GGWCC | 1 cut(s) | 530 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 321 |
| BmgT120I | GGNCC | 1 cut(s) | 530 |
| BmiI | GGNNCC | 3 cut(s) | 296, 486, 594 |
| BmrFI | CCNGG | 2 cut(s) | 30, 353 |
| BpuEI | CTTGAG | 1 cut(s) | 192 |
| BsaAI | YACGTR | 2 cut(s) | 186, 628 |
| BsaJI | CCNNGG | 3 cut(s) | 28, 29, 543 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 248, 494 |
| Bse1I | ACTGG | 3 cut(s) | 223, 436, 596 |
| BseBI | CCWGG | 2 cut(s) | 30, 353 |
| BseDI | CCNNGG | 3 cut(s) | 28, 29, 543 |
| BseGI | GGATG | 2 cut(s) | 338, 440 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 248, 494 |
| BseMII | CTCAG | 1 cut(s) | 299 |
| BseNI | ACTGG | 3 cut(s) | 223, 436, 596 |
| BseRI | GAGGAG | 1 cut(s) | 273 |
| BseXI | GCAGC | 3 cut(s) | 419, 482, 490 |
| BshFI | GGCC | 1 cut(s) | 80 |
| BshNI | GGYRCC | 1 cut(s) | 484 |
| BsiHKAI | GWGCWC | 2 cut(s) | 208, 338 |
| BsiSI | CCGG | 1 cut(s) | 482 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 248, 494 |
| BsnI | GGCC | 1 cut(s) | 80 |
| Bsp1286I | GDGCHC | 2 cut(s) | 208, 338 |
| Bsp143I | GATC | 1 cut(s) | 138 |
| BspACI | CCGC | 3 cut(s) | 119, 125, 447 |
| BspANI | GGCC | 1 cut(s) | 80 |
| BspCNI | CTCAG | 1 cut(s) | 298 |
| BspLI | GGNNCC | 3 cut(s) | 296, 486, 594 |
| BspT107I | GGYRCC | 1 cut(s) | 484 |
| BsrI | ACTGG | 3 cut(s) | 223, 436, 596 |
| BssECI | CCNNGG | 3 cut(s) | 28, 29, 543 |
| BssMI | GATC | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 1 cut(s) | 543 |
| Bst2UI | CCWGG | 2 cut(s) | 30, 353 |
| Bst4CI | ACNGT | 2 cut(s) | 294, 656 |
| Bst6I | CTCTTC | 1 cut(s) | 29 |
| BstBAI | YACGTR | 2 cut(s) | 186, 628 |
| BstC8I | GCNNGC | 1 cut(s) | 78 |
| BstDEI | CTNAG | 1 cut(s) | 285 |
| BstF5I | GGATG | 2 cut(s) | 338, 440 |
| BstH2I | RGCGCY | 1 cut(s) | 181 |
| BstHHI | GCGC | 1 cut(s) | 180 |
| BstKTI | GATC | 1 cut(s) | 141 |
| BstMBI | GATC | 1 cut(s) | 138 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 125, 170 |
| BstNI | CCWGG | 2 cut(s) | 30, 353 |
| BstSCI | CCNGG | 2 cut(s) | 28, 351 |
| BstSNI | TACGTA | 1 cut(s) | 186 |
| BstV1I | GCAGC | 3 cut(s) | 419, 482, 490 |
| BsuRI | GGCC | 1 cut(s) | 80 |
| BtsCI | GGATG | 2 cut(s) | 338, 440 |
| BtsIMutI | CAGTG | 3 cut(s) | 429, 603, 652 |
| Cac8I | GCNNGC | 1 cut(s) | 78 |
| CaiI | CAGNNNCTG | 1 cut(s) | 348 |
| CfoI | GCGC | 1 cut(s) | 180 |
| Cfr13I | GGNCC | 1 cut(s) | 530 |
| Csp6I | GTAC | 2 cut(s) | 396, 625 |
| CviAII | CATG | 1 cut(s) | 568 |
| CviJI | RGCY | 9 cut(s) | 5, 34, 76, 80, 128, 206, 236, 410, 473 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 34, 76, 80, 128, 206, 236, 410, 473 |
| CviQI | GTAC | 2 cut(s) | 396, 625 |
| DdeI | CTNAG | 1 cut(s) | 285 |
| DpnI | GATC | 1 cut(s) | 140 |
| DpnII | GATC | 1 cut(s) | 138 |
| DriI | GACNNNNNGTC | 1 cut(s) | 321 |
| Eam1104I | CTCTTC | 1 cut(s) | 29 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 321 |
| EarI | CTCTTC | 1 cut(s) | 29 |
| Ecl136II | GAGCTC | 1 cut(s) | 206 |
| Eco105I | TACGTA | 1 cut(s) | 186 |
| Eco130I | CCWWGG | 1 cut(s) | 543 |
| Eco24I | GRGCYC | 1 cut(s) | 208 |
| Eco47I | GGWCC | 1 cut(s) | 530 |
| Eco47III | AGCGCT | 1 cut(s) | 179 |
| Eco53kI | GAGCTC | 1 cut(s) | 206 |
| Eco57I | CTGAAG | 1 cut(s) | 543 |
| EcoICRI | GAGCTC | 1 cut(s) | 206 |
| EcoRII | CCWGG | 2 cut(s) | 28, 351 |
| EcoT14I | CCWWGG | 1 cut(s) | 543 |
| EcoT38I | GRGCYC | 1 cut(s) | 208 |
| ErhI | CCWWGG | 1 cut(s) | 543 |
| FaeI | CATG | 1 cut(s) | 571 |
| FaiI | YATR | 2 cut(s) | 189, 569 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 65, 97 |
| FatI | CATG | 1 cut(s) | 567 |
| Fnu4HI | GCNGC | 4 cut(s) | 126, 408, 471, 504 |
| FokI | GGATG | 2 cut(s) | 325, 427 |
| FriOI | GRGCYC | 1 cut(s) | 208 |
| Fsp4HI | GCNGC | 4 cut(s) | 126, 408, 471, 504 |
| GlaI | GCGC | 1 cut(s) | 179 |
| GluI | GCNGC | 4 cut(s) | 126, 408, 471, 504 |
| HaeII | RGCGCY | 1 cut(s) | 181 |
| HaeIII | GGCC | 1 cut(s) | 80 |
| HapII | CCGG | 1 cut(s) | 482 |
| HhaI | GCGC | 1 cut(s) | 180 |
| Hin1II | CATG | 1 cut(s) | 571 |
| Hin6I | GCGC | 1 cut(s) | 178 |
| HinP1I | GCGC | 1 cut(s) | 178 |
| HincII | GTYRAC | 1 cut(s) | 607 |
| HindII | GTYRAC | 1 cut(s) | 607 |
| HinfI | GANTC | 2 cut(s) | 21, 345 |
| HpaII | CCGG | 1 cut(s) | 482 |
| HphI | GGTGA | 1 cut(s) | 219 |
| Hpy166II | GTNNAC | 1 cut(s) | 607 |
| Hpy188III | TCNNGA | 5 cut(s) | 95, 265, 313, 342, 561 |
| Hpy8I | GTNNAC | 1 cut(s) | 607 |
| HpyAV | CCTTC | 3 cut(s) | 336, 582, 610 |
| HpyCH4III | ACNGT | 2 cut(s) | 294, 656 |
| HpyCH4IV | ACGT | 3 cut(s) | 185, 319, 627 |
| HpyCH4V | TGCA | 2 cut(s) | 407, 692 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 125, 170 |
| HpyF3I | CTNAG | 1 cut(s) | 285 |
| HpySE526I | ACGT | 3 cut(s) | 185, 319, 627 |
| Hsp92II | CATG | 1 cut(s) | 571 |
| HspAI | GCGC | 1 cut(s) | 178 |
| Kzo9I | GATC | 1 cut(s) | 138 |
| Lsp1109I | GCAGC | 3 cut(s) | 419, 482, 490 |
| MaeII | ACGT | 3 cut(s) | 185, 319, 627 |
| MaeIII | GTNAC | 2 cut(s) | 84, 288 |
| MalI | GATC | 1 cut(s) | 140 |
| MboI | GATC | 1 cut(s) | 138 |
| MboII | GAAGA | 2 cut(s) | 16, 216 |
| MhlI | GDGCHC | 2 cut(s) | 208, 338 |
| MluCI | AATT | 2 cut(s) | 50, 680 |
| MlyI | GAGTC | 1 cut(s) | 15 |
| MnlI | CCTC | 5 cut(s) | 115, 294, 454, 484, 578 |
| MseI | TTAA | 5 cut(s) | 132, 456, 513, 579, 648 |
| MspI | CCGG | 1 cut(s) | 482 |
| MspR9I | CCNGG | 2 cut(s) | 30, 353 |
| MvaI | CCWGG | 2 cut(s) | 30, 353 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 125, 170 |
| NdeII | GATC | 1 cut(s) | 138 |
| NlaIII | CATG | 1 cut(s) | 571 |
| NlaIV | GGNNCC | 3 cut(s) | 296, 486, 594 |
| NmuCI | GTSAC | 1 cut(s) | 288 |
| PasI | CCCWGGG | 1 cut(s) | 29 |
| PfeI | GAWTC | 1 cut(s) | 345 |
| PkrI | GCNGC | 4 cut(s) | 127, 409, 472, 505 |
| PleI | GAGTC | 1 cut(s) | 15 |
| PpsI | GAGTC | 1 cut(s) | 15 |
| Ppu21I | YACGTR | 2 cut(s) | 186, 628 |
| Psp124BI | GAGCTC | 1 cut(s) | 208 |
| Psp6I | CCWGG | 2 cut(s) | 28, 351 |
| PspGI | CCWGG | 2 cut(s) | 28, 351 |
| PspN4I | GGNNCC | 3 cut(s) | 296, 486, 594 |
| PspPI | GGNCC | 1 cut(s) | 530 |
| PstNI | CAGNNNCTG | 1 cut(s) | 348 |
| RsaI | GTAC | 2 cut(s) | 397, 626 |
| RsaNI | GTAC | 2 cut(s) | 396, 625 |
| SacI | GAGCTC | 1 cut(s) | 208 |
| SaqAI | TTAA | 5 cut(s) | 132, 456, 513, 579, 648 |
| SatI | GCNGC | 4 cut(s) | 126, 408, 471, 504 |
| Sau3AI | GATC | 1 cut(s) | 138 |
| Sau96I | GGNCC | 1 cut(s) | 530 |
| SchI | GAGTC | 1 cut(s) | 15 |
| ScrFI | CCNGG | 2 cut(s) | 30, 353 |
| SduI | GDGCHC | 2 cut(s) | 208, 338 |
| SetI | ASST | 8 cut(s) | 78, 188, 208, 238, 322, 385, 495, 630 |
| SinI | GGWCC | 1 cut(s) | 530 |
| SmlI | CTYRAG | 1 cut(s) | 207 |
| SmoI | CTYRAG | 1 cut(s) | 207 |
| SnaBI | TACGTA | 1 cut(s) | 186 |
| Sse9I | AATT | 2 cut(s) | 50, 680 |
| SsiI | CCGC | 3 cut(s) | 119, 125, 447 |
| SspI | AATATT | 1 cut(s) | 577 |
| SstI | GAGCTC | 1 cut(s) | 208 |
| StyD4I | CCNGG | 2 cut(s) | 28, 351 |
| StyI | CCWWGG | 1 cut(s) | 543 |
| TaaI | ACNGT | 2 cut(s) | 294, 656 |
| TaiI | ACGT | 3 cut(s) | 188, 322, 630 |
| TasI | AATT | 2 cut(s) | 50, 680 |
| TauI | GCSGC | 1 cut(s) | 128 |
| TfiI | GAWTC | 1 cut(s) | 345 |
| Tru1I | TTAA | 5 cut(s) | 132, 456, 513, 579, 648 |
| Tru9I | TTAA | 5 cut(s) | 132, 456, 513, 579, 648 |
| TscAI | CASTG | 3 cut(s) | 436, 603, 659 |
| TseFI | GTSAC | 1 cut(s) | 288 |
| TseI | GCWGC | 3 cut(s) | 407, 470, 503 |
| Tsp45I | GTSAC | 1 cut(s) | 288 |
| TspDTI | ATGAA | 2 cut(s) | 80, 584 |
| TspGWI | ACGGA | 1 cut(s) | 477 |
| TspRI | CASTG | 3 cut(s) | 436, 603, 659 |
| VpaK11BI | GGWCC | 1 cut(s) | 530 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 309, 349 |