pycom12g21520

Exportin 1-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
22675780 .. 22683254
7475 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3606 bp
ATGGAAGAGAGCAGCAACAGCGTGGCTACCAACGTCGCCCAAGCCATTGCCGTAGCTCTCGACTGGAGCTCCACTCCCGACGCCCGCAAAGCAGCCGTTGCATTCCTCGAGTCGATTAAAAACGGAGATGTGCGGATTTTGGCAAACACTGCGTTTCTTCTGGTGAAGAAGGATTGGTCTTCCGAAATTCGGTTGCATGCATTTAAAATGTTACAGCATTTGGTGCGATTGCGGTGGGAAGAACTAAGCTCTACAGAGCGTAGAAACTTTGCAAATATCACTGTTGGTTTAATGTCTGATATTGCAAGTCCTAGTGAGGAGTGGGCATTAAAAAGTCAGACAGCAGCCCTTGTTGCCGAGATGGTTAGAAGGGAAGGACTAAATCTATGGCAAGAACTGTTTCCAACTCTGGTTTCATTATCCTACAAGGGTCCTATTCAAGCCGAGTTAGTCTCCATGACGCTAAGGTGGCTTCCTGAAGATATTACTGTTCACAATGAAGATTTGGAAGGAGATCGGAGAAGGCTATTGCTGCGGGGGCTGACCCAATCTTTACCTGAAATTTTGCCTTTATTATACACTTTACTAGAGAGGCACTTCGGAGCTGCGTTGAGTGAGGCAGGTAAACAACAATTCGACCTTGCAAAGCAACATGCAGCAACAGTAACAGCTACTTTGAATGCTGTGAATGCATACTCTGAATGGGCTCCATTGCCTGATCTATCTAAATCTGGTATAATTCATGGGTGTGGTTTCTTACTTTCTTCACCTGACTTTCGTCTTCATGCTTGTGAGTTTTTCAAATTTGTTTCCCAAAGGAAGAGACCTATTGATGATACCTCTGTTCCTGAATTTGATTCTGCAATGAGTAATATCTTTCAAATATTGATGAATGTCTCCAAAGAATTTTTGTACAGATCTAGCCCCGGTGCTGGGCTTATTGATGAAAGCGATATTGAGTTTGCGGAATATATATGTGAAAGTATGGTGTCTTTGGGTTCCACAAACTTGCAATGTATTGCTGGTGGTAGCGCTGTGCTACCTCTTTATTTACAACAGATGCTGGGGTTTTTCCAACATTTTAAGCTAGCTCTTCATTTTCAATCTCTGAACTTTTGGCTGGCACTAATGAGAGACTTGATGTCAAAGACAAAGGCTGTTGCTCACTCAGCTGGAGATGGTTCTGATCCAGTCGATATTGAAAAGAGAAAAATCTTAAGTTTTTTGAATGATGATATATGTAGTGCAATTCTGGATGTATCTTTCCAACACATGCTCAAGAGAGAAAAGGTAATTCACGGGACAGCATTTTCTTTAGGGCAATTGGAATTATGGAGTGATGATGTTGAGGACAAGGGGACTTTTGGCCAGTATCGTTCAAAGTTGTTAGAACTGATCAAGCTGGTTGCTTTATACAAGCCTCTTATAGCTGGTTCTAAAGTTTCTGAAAGAATTGATACAATCATCAAAACCCTCTTGCTTTCTCCAATGCCTGCTCAGGACTTAGTTGTGATGGAAAGCATGCAGTTGGCTTTAGAAAATGTTGTAAGCGCTATTTTCGATGGATCCAATGAAATTCCTGGGGGTCATTCAGAAGTTCAACTTGAACTATGCAGAATGTTTGAAGGTTTGCTTCAGCAGCTTCTTTCTTTGAAGTGGACTGAGCCAGCCCTTGTGGAAGTACTTGGGCACTACTTGGATGCAATGGGTTCATTTTTGAAGTATTTTCCAGATGCAGTGGGCAGTGTTATTAATAAATTATTTGAGCTCCTAAACTCGCTTCCTTTTGTTGTTAAGGATCCATCTACAAGTAGTGCACGGTATGCAAGGTTGCAGATTTGTACGTCGTTTATTCGTATAGCCAAAACTGCTGACACAAGTGTTCTGCCTCACATGAAGGCTATAGCCGACACCATGGCTTATATGAAAAGAGAAGGTTCTTTACTTCGTGGTGAACACAATCTTCTAGGTGAAGCGTTTCTTGTCATGGCTTCTGCTGCTGGAATTCAGCAGCAACAAGAAGTTCTGGCCTGGTTACTAGAACCTTTAAGCCAGCAATGGACACAAATTGAGTGGCAAAATAATTATCTATCTGAACCACTTGGTCTTGTTCGCTTGTGCTCCGAGACCCCAGTTATGTGGTCAGTTTTCCACACTGTCACATTCTTTGAGAAGGCACTTAAGAGAAGTGGAACCAGAAAATCCCAGTCAAATCTACAAAGCAACTCAACAGAAAGTTCTATGCCCTTGCACCCTATGGCTTCTCATCTATCATGGATGCTGCCACCTCTTCCAAAACTATTTCGTGCCTTACATTCCCTTTGGTCTCCAACTGTATACCAAATACTACCTGGGGAGATTAGAGCTGCAATGACCATGAGTGATGTTGAGCAATTCAGTCTGCTTGGTGAAGGAAACCCTAAATTGCCAAAGGGTAACATAGCCTTTACCAATGGATCCCATATTAGTGCAAGTAAGGAAGGATATGTGGAGCCAAATGAATCAGACATACGAAATTGGTTGAAAGGTATCAGAGACAGTGGGTACAATGTATTGGGCCTGGCAACCACTGTTGGGGACTCATTTTACAAATGTTTGGATAGTCAATCTGTTGCTCTAGCTCTAGTGGAGAATATACATTCAATGGAATTCAGGCATATCCGGCTGCTTGTTCATTCAGTTTTGATTCCTTTGGTTAAATTTTGTCCTGTGGATTTGTGGGAGGCATGGTTCGAAAAGCTCTTGCTCCCATTATTCCAACACTCCCAACAGGCTCTTAGTTGCTCCTGGTCCAGTCTTCTACATGAAGGGAGAGCAAAGGTCCCAGATGCCCGTGCCATACTTGCTGGTTTGGACTTAAAAGTGGAAGTAATGGAAGAAAAGCTACTTAGGGATCTAACTCGGGAGATTTGTTCACTCCTCTCTGTTATAGCTTCGCCACAGCTAAATGCTGGGCTTCCTTCCTTGGAGCACTCTGGGCATGTTCATCGTGTTGACGTATCTTCGCTCAAAGATTTGGATGCATTTGCATCAAGCTCCATGGTCGGTTTCCTTTTGAAGCTCAAAGGTCTTGCCCTTCCAGTGCTGCAGATATGTTTAGAAGCTTTTACATGGACGGATGGTGAAGCTATGACAAAAGTTTCTTCCTTTTGTTCTGCTTTGATTGGTTTAGCAGTGTCGACAAATAGTATGGAGCTCCTACAATTTGTTTCTAAGGATCTCTTTTCTGCAATTATCCAAGGTTTAGCTCTTGAGTCAAATGCTTTCATCAGTGCTGATTTGATTGGTCACTGTCGTGATATATACATACATCTTTGTGATAGAGATCCAACTCCTAGGCAGATTCTGCTCTCTCTCCCTTGTATCAAACAGCATGATTTGCTTGCTTTTGAAGAAGCTTTGACGAAGACATCTAGTCCCAAAGAACAAAAGCAACATATGAAAAGCTTGCTCGTATTAGCCACTGGTAACAAGTTAAAAGCGCTTGCTGTTCAGAAAAGCGTAAATGTCATAACAAATGTATCAATGAGGCCTCGCAGCACGGCCAACACCACAGAAACCAGAGCGGACGATGGAGAGACTGTTGGACTGGCGGCCATATTGTGA

Protein Analysis

1202

Amino Acids

133.31

Weight (kDa)

5.88

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xpo1 PF08389 108 - 266 1.2e-25 Exportin 1-like protein
Exportin-5 PF19273 316 - 1166 0.0 Exportin-5 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 611
AccBSI CCGCTC 1 cut(s) 3566
AccI GTMKAC 2 cut(s) 2337, 3179
AciI CCGC 7 cut(s) 85, 133, 232, 535, 965, 3566, 3593
AcoI YGGCCR 3 cut(s) 1366, 3543, 3594
AcsI RAATTY 9 cut(s) 186, 561, 803, 851, 905, 1575, 2004, 2648, 2699
AcuI CTGAAG 2 cut(s) 498, 1619
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 4 cut(s) 914, 1683, 1843, 2546
AfeI AGCGCT 3 cut(s) 1033, 1552, 3483
AfiI CCNNNNNNNGG 4 cut(s) 189, 932, 933, 2574
AflII CTTAAG 2 cut(s) 1216, 2180
AhdI GACNNNNNGTC 2 cut(s) 1141, 3414
AjnI CCWGG 5 cut(s) 1579, 2030, 2350, 2559, 2786
AjuI GAANNNNNNNTTGG 2 cut(s) 397, 429
AleI CACNNNNGTG 1 cut(s) 3294
AloI GAACNNNNNNTCC 2 cut(s) 2714, 2746
Alw21I GWGCWC 6 cut(s) 71, 1770, 1819, 2123, 2973, 3198
Alw26I GTCTC 8 cut(s) 457, 817, 901, 1128, 2120, 2331, 2529, 3572
Alw44I GTGCAC 1 cut(s) 1815
AlwNI CAGNNNCTG 2 cut(s) 1063, 3346
Ama87I CYCGRG 2 cut(s) 107, 2901
Aor51HI AGCGCT 3 cut(s) 1033, 1552, 3483
AoxI GGCC 6 cut(s) 1366, 2028, 2557, 3530, 3543, 3594
ApaLI GTGCAC 1 cut(s) 1815
ApoI RAATTY 9 cut(s) 186, 561, 803, 851, 905, 1575, 2004, 2648, 2699
AseI ATTAAT 1 cut(s) 1752
Asp700I GAANNNNTTC 2 cut(s) 399, 1977
AspA2I CCTAGG 1 cut(s) 3335
AspLEI GCGC 3 cut(s) 1034, 1553, 3484
AspS9I GGNCC 4 cut(s) 431, 2557, 2790, 2821
AsuC2I CCSGG 1 cut(s) 927
AsuHPI GGTGA 6 cut(s) 175, 759, 1964, 1982, 2420, 3134
AsuII TTCGAA 1 cut(s) 2733
AsuNHI GCTAGC 1 cut(s) 1087
AvaI CYCGRG 2 cut(s) 107, 2901
AvaII GGWCC 3 cut(s) 431, 2790, 2821
AvrII CCTAGG 1 cut(s) 3335
BaeGI GKGCMC 2 cut(s) 1692, 1819
BaeI ACNNNNGTAYC 4 cut(s) 828, 861, 3504, 3537
BalI TGGCCA 1 cut(s) 1368
BamHI GGATCC 3 cut(s) 1565, 1798, 2456
BanII GRGCYC 4 cut(s) 71, 709, 1770, 3198
BarI GAAGNNNNNNTAC 4 cut(s) 1926, 1958, 2868, 2900
BbsI GAAGAC 4 cut(s) 171, 773, 2789, 3413
Bbv12I GWGCWC 6 cut(s) 71, 1770, 1819, 2123, 2973, 3198
BccI CCATC 7 cut(s) 355, 1172, 1507, 1556, 1810, 3113, 3566
BceAI ACGGC 3 cut(s) 35, 80, 3558
BcgI CGANNNNNNTGC 2 cut(s) 2969, 3003
BciT130I CCWGG 5 cut(s) 1581, 2032, 2352, 2561, 2788
BclI TGATCA 1 cut(s) 1395
BcnI CCSGG 1 cut(s) 927
BcoDI GTCTC 8 cut(s) 457, 817, 901, 1128, 2120, 2331, 2529, 3572
BfmI CTRYAG 3 cut(s) 252, 1902, 3086
BfoI RGCGCY 3 cut(s) 1035, 1554, 3485
BfrI CTTAAG 2 cut(s) 1216, 2180
BfuAI ACCTGC 1 cut(s) 611
BglII AGATCT 1 cut(s) 917
BlnI CCTAGG 1 cut(s) 3335
BmcAI AGTACT 1 cut(s) 1683
Bme1390I CCNGG 6 cut(s) 927, 1581, 2032, 2352, 2561, 2788
Bme18I GGWCC 3 cut(s) 431, 2790, 2821
BmeRI GACNNNNNGTC 2 cut(s) 1141, 3414
BmeT110I CYCGRG 2 cut(s) 107, 2901
BmgT120I GGNCC 4 cut(s) 431, 2557, 2790, 2821
BmiI GGNNCC 9 cut(s) 432, 708, 1000, 1567, 1800, 2194, 2458, 2493, 2823
BmrFI CCNGG 6 cut(s) 927, 1581, 2032, 2352, 2561, 2788
BmrI ACTGGG 2 cut(s) 2126, 2200
BmsI GCATC 7 cut(s) 1050, 1690, 1723, 2268, 2818, 3010, 3038
BmtI GCTAGC 1 cut(s) 1091
BmuI ACTGGG 2 cut(s) 2126, 2200
BoxI GACNNNNGTC 1 cut(s) 777
BpiI GAAGAC 4 cut(s) 171, 773, 2789, 3413
BplI GAGNNNNNCTC 4 cut(s) 58, 90, 437, 469
BpmI CTGGAG 2 cut(s) 85, 1194
Bpu10I CCTNAGC 2 cut(s) 464, 1497
Bpu14I TTCGAA 1 cut(s) 2733
BpuEI CTTGAG 2 cut(s) 1262, 3272
BpuMI CCSGG 1 cut(s) 927
BsaBI GATNNNNATC 1 cut(s) 3324
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 3 cut(s) 817, 2120, 2331
BsaJI CCNNGG 8 cut(s) 925, 1580, 1914, 2351, 2964, 3039, 3238, 3335
BsaXI ACNNNNNCTCC 6 cut(s) 53, 83, 2714, 2744, 3567, 3597
Bsc4I CCNNNNNNNGG 4 cut(s) 189, 932, 933, 2574
Bse1I ACTGG 9 cut(s) 68, 1190, 1369, 2132, 2206, 2793, 3080, 3469, 3594
Bse3DI GCAATG 7 cut(s) 45, 710, 870, 1019, 1710, 2063, 2376
Bse8I GATNNNNATC 1 cut(s) 3324
BseBI CCWGG 5 cut(s) 1581, 2032, 2352, 2561, 2788
BseDI CCNNGG 8 cut(s) 925, 1580, 1914, 2351, 2964, 3039, 3238, 3335
BseGI GGATG 5 cut(s) 1261, 1705, 2283, 3025, 3124
BseJI GATNNNNATC 1 cut(s) 3324
BseLI CCNNNNNNNGG 4 cut(s) 189, 932, 933, 2574
BseMI GCAATG 7 cut(s) 45, 710, 870, 1019, 1710, 2063, 2376
BseMII CTCAG 3 cut(s) 1182, 1511, 1653
BseNI ACTGG 9 cut(s) 68, 1190, 1369, 2132, 2206, 2793, 3080, 3469, 3594
BseRI GAGGAG 2 cut(s) 332, 2909
BseSI GKGCMC 2 cut(s) 1692, 1819
BseYI CCCAGC 3 cut(s) 932, 1063, 2951
BshFI GGCC 6 cut(s) 1368, 2030, 2559, 3532, 3545, 3596
BsiHKAI GWGCWC 6 cut(s) 71, 1770, 1819, 2123, 2973, 3198
BsiHKCI CYCGRG 2 cut(s) 107, 2901
BsiSI CCGG 2 cut(s) 927, 2662
BslFI GGGAC 5 cut(s) 1315, 1372, 2591, 2807, 3402
BslI CCNNNNNNNGG 4 cut(s) 189, 932, 933, 2574
BsmAI GTCTC 8 cut(s) 457, 817, 901, 1128, 2120, 2331, 2529, 3572
BsmFI GGGAC 5 cut(s) 1315, 1372, 2591, 2807, 3402
BsmI GAATGC 3 cut(s) 101, 685, 694
BsnI GGCC 6 cut(s) 1368, 2030, 2559, 3532, 3545, 3596
Bso31I GGTCTC 3 cut(s) 817, 2120, 2331
BsoBI CYCGRG 2 cut(s) 107, 2901
Bsp119I TTCGAA 1 cut(s) 2733
Bsp1286I GDGCHC 8 cut(s) 71, 709, 1692, 1770, 1819, 2123, 2973, 3198
Bsp1407I TGTACA 1 cut(s) 912
Bsp19I CCATGG 2 cut(s) 1914, 3039
BspACI CCGC 7 cut(s) 85, 133, 232, 535, 965, 3566, 3593
BspANI GGCC 6 cut(s) 1368, 2030, 2559, 3532, 3545, 3596
BspCNI CTCAG 3 cut(s) 1181, 1510, 1654
BspLI GGNNCC 9 cut(s) 432, 708, 1000, 1567, 1800, 2194, 2458, 2493, 2823
BspMAI CTGCAG 1 cut(s) 3090
BspMI ACCTGC 1 cut(s) 611
BspOI GCTAGC 1 cut(s) 1091
BspQI GCTCTTC 1 cut(s) 1098
BspT104I TTCGAA 1 cut(s) 2733
BspTI CTTAAG 2 cut(s) 1216, 2180
BspTNI GGTCTC 3 cut(s) 817, 2120, 2331
BsrBI CCGCTC 1 cut(s) 3566
BsrDI GCAATG 7 cut(s) 45, 710, 870, 1019, 1710, 2063, 2376
BsrGI TGTACA 1 cut(s) 912
BsrI ACTGG 9 cut(s) 68, 1190, 1369, 2132, 2206, 2793, 3080, 3469, 3594
BssECI CCNNGG 8 cut(s) 925, 1580, 1914, 2351, 2964, 3039, 3238, 3335
BssNAI GTATAC 1 cut(s) 2338
BssNI GRCGYC 1 cut(s) 81
BssT1I CCWWGG 5 cut(s) 1914, 2964, 3039, 3238, 3335
Bst1107I GTATAC 1 cut(s) 2338
Bst2UI CCWGG 5 cut(s) 1581, 2032, 2352, 2561, 2788
Bst6I CTCTTC 3 cut(s) 815, 1098, 2295
BstACI GRCGYC 1 cut(s) 81
BstAFI CTTAAG 2 cut(s) 1216, 2180
BstAPI GCANNNNNTGC 6 cut(s) 98, 149, 223, 1823, 3346, 3379
BstAUI TGTACA 1 cut(s) 912
BstBI TTCGAA 1 cut(s) 2733
BstDEI CTNAG 9 cut(s) 245, 464, 1168, 1497, 1504, 1662, 2777, 2888, 3213
BstDSI CCRYGG 2 cut(s) 1914, 3039
BstF5I GGATG 5 cut(s) 1261, 1705, 2283, 3025, 3124
BstH2I RGCGCY 3 cut(s) 1035, 1554, 3485
BstHHI GCGC 3 cut(s) 1034, 1553, 3484
BstMAI GTCTC 8 cut(s) 457, 817, 901, 1128, 2120, 2331, 2529, 3572
BstNI CCWGG 5 cut(s) 1581, 2032, 2352, 2561, 2788
BstNSI RCATGY 5 cut(s) 200, 656, 1276, 1525, 2984
BstPAI GACNNNNGTC 1 cut(s) 777
BstSCI CCNGG 6 cut(s) 925, 1579, 2030, 2350, 2559, 2786
BstSFI CTRYAG 3 cut(s) 252, 1902, 3086
BstSLI GKGCMC 2 cut(s) 1692, 1819
BstV2I GAAGAC 4 cut(s) 171, 773, 2789, 3413
BstX2I RGATCY 7 cut(s) 917, 1565, 1798, 2456, 2893, 3217, 3325
BstXI CCANNNNNNTGG 1 cut(s) 2139
BstYI RGATCY 7 cut(s) 917, 1565, 1798, 2456, 2893, 3217, 3325
BstZ17I GTATAC 1 cut(s) 2338
BsuRI GGCC 6 cut(s) 1368, 2030, 2559, 3532, 3545, 3596
BtgI CCRYGG 2 cut(s) 1914, 3039
BtsCI GGATG 5 cut(s) 1261, 1705, 2283, 3025, 3124
BtsI GCAGTG 4 cut(s) 147, 1743, 1750, 3180
BveI ACCTGC 1 cut(s) 611
CaiI CAGNNNCTG 2 cut(s) 1063, 3346
CfoI GCGC 3 cut(s) 1034, 1553, 3484
Cfr13I GGNCC 4 cut(s) 431, 2557, 2790, 2821
CseI GACGC 2 cut(s) 89, 469
Csp6I GTAC 4 cut(s) 913, 1682, 1842, 2545
CspCI CAANNNNNGTGG 2 cut(s) 2054, 2089
CviQI GTAC 4 cut(s) 913, 1682, 1842, 2545
DdeI CTNAG 9 cut(s) 245, 464, 1168, 1497, 1504, 1662, 2777, 2888, 3213
DraI TTTAAA 1 cut(s) 205
DriI GACNNNNNGTC 2 cut(s) 1141, 3414
EaeI YGGCCR 3 cut(s) 1366, 3543, 3594
Eam1104I CTCTTC 3 cut(s) 815, 1098, 2295
Eam1105I GACNNNNNGTC 2 cut(s) 1141, 3414
EarI CTCTTC 3 cut(s) 815, 1098, 2295
Ecl136II GAGCTC 3 cut(s) 69, 1768, 3196
Eco130I CCWWGG 5 cut(s) 1914, 2964, 3039, 3238, 3335
Eco147I AGGCCT 1 cut(s) 3532
Eco24I GRGCYC 4 cut(s) 71, 709, 1770, 3198
Eco31I GGTCTC 3 cut(s) 817, 2120, 2331
Eco47I GGWCC 3 cut(s) 431, 2790, 2821
Eco47III AGCGCT 3 cut(s) 1033, 1552, 3483
Eco53kI GAGCTC 3 cut(s) 69, 1768, 3196
Eco57I CTGAAG 2 cut(s) 498, 1619
Eco88I CYCGRG 2 cut(s) 107, 2901
EcoICRI GAGCTC 3 cut(s) 69, 1768, 3196
EcoO109I RGGNCCY 2 cut(s) 431, 2821
EcoRI GAATTC 2 cut(s) 2004, 2648
EcoRII CCWGG 5 cut(s) 1579, 2030, 2350, 2559, 2786
EcoT14I CCWWGG 5 cut(s) 1914, 2964, 3039, 3238, 3335
EcoT22I ATGCAT 3 cut(s) 202, 694, 3025
EcoT38I GRGCYC 4 cut(s) 71, 709, 1770, 3198
ErhI CCWWGG 5 cut(s) 1914, 2964, 3039, 3238, 3335
FalI AAGNNNNNCTT 8 cut(s) 1587, 1619, 1617, 1649, 1965, 1997, 3206, 3238
FaqI GGGAC 5 cut(s) 1315, 1372, 2591, 2807, 3402
FauI CCCGC 2 cut(s) 92, 528
FauNDI CATATG 1 cut(s) 3438
FbaI TGATCA 1 cut(s) 1395
FblI GTMKAC 2 cut(s) 2337, 3179
FokI GGATG 5 cut(s) 1268, 1712, 2290, 3032, 3131
FriOI GRGCYC 4 cut(s) 71, 709, 1770, 3198
GlaI GCGC 3 cut(s) 1033, 1552, 3483
GsaI CCCAGC 3 cut(s) 936, 1067, 2955
GsuI CTGGAG 2 cut(s) 85, 1194
HaeII RGCGCY 3 cut(s) 1035, 1554, 3485
HaeIII GGCC 6 cut(s) 1368, 2030, 2559, 3532, 3545, 3596
HapII CCGG 2 cut(s) 927, 2662
HgaI GACGC 2 cut(s) 89, 469
HhaI GCGC 3 cut(s) 1034, 1553, 3484
Hin1I GRCGYC 1 cut(s) 81
Hin6I GCGC 3 cut(s) 1032, 1551, 3482
HinP1I GCGC 3 cut(s) 1032, 1551, 3482
HincII GTYRAC 2 cut(s) 2995, 3180
HindII GTYRAC 2 cut(s) 2995, 3180
HindIII AAGCTT 3 cut(s) 3102, 3396, 3445
HinfI GANTC 7 cut(s) 110, 857, 2501, 2579, 2686, 3254, 3343
HpaII CCGG 2 cut(s) 927, 2662
HphI GGTGA 6 cut(s) 175, 759, 1964, 1982, 2420, 3134
Hpy166II GTNNAC 9 cut(s) 493, 626, 1659, 1817, 1955, 2338, 2915, 2995, 3180
Hpy8I GTNNAC 9 cut(s) 493, 626, 1659, 1817, 1955, 2338, 2915, 2995, 3180
Hpy99I CGWCG 3 cut(s) 38, 83, 1849
HpyCH4IV ACGT 3 cut(s) 33, 1844, 2997
HpyF3I CTNAG 9 cut(s) 245, 464, 1168, 1497, 1504, 1662, 2777, 2888, 3213
HpySE526I ACGT 3 cut(s) 33, 1844, 2997
Hsp92I GRCGYC 1 cut(s) 81
HspAI GCGC 3 cut(s) 1032, 1551, 3482
Ksp22I TGATCA 1 cut(s) 1395
LguI GCTCTTC 1 cut(s) 1098
LweI GCATC 7 cut(s) 1050, 1690, 1723, 2268, 2818, 3010, 3038
MaeII ACGT 3 cut(s) 33, 1844, 2997
MaeIII GTNAC 7 cut(s) 210, 664, 2034, 2158, 2435, 3287, 3467
MbiI CCGCTC 1 cut(s) 3566
MfeI CAATTG 1 cut(s) 1322
MflI RGATCY 7 cut(s) 917, 1565, 1798, 2456, 2893, 3217, 3325
MhlI GDGCHC 8 cut(s) 71, 709, 1692, 1770, 1819, 2123, 2973, 3198
MlsI TGGCCA 1 cut(s) 1368
MluNI TGGCCA 1 cut(s) 1368
MlyI GAGTC 3 cut(s) 119, 2573, 3263
MmeI TCCRAC 7 cut(s) 428, 1099, 1291, 2354, 2782, 3353, 3565
Mox20I TGGCCA 1 cut(s) 1368
Mph1103I ATGCAT 3 cut(s) 202, 694, 3025
MroXI GAANNNNTTC 2 cut(s) 399, 1977
MscI TGGCCA 1 cut(s) 1368
MslI CAYNNNNRTG 5 cut(s) 747, 789, 2466, 3294, 3315
Msp20I TGGCCA 1 cut(s) 1368
MspA1I CMGCKG 1 cut(s) 1172
MspCI CTTAAG 2 cut(s) 1216, 2180
MspI CCGG 2 cut(s) 927, 2662
MspR9I CCNGG 6 cut(s) 927, 1581, 2032, 2352, 2561, 2788
MunI CAATTG 1 cut(s) 1322
Mva1269I GAATGC 3 cut(s) 101, 685, 694
MvaI CCWGG 5 cut(s) 1581, 2032, 2352, 2561, 2788
NciI CCSGG 1 cut(s) 927
NcoI CCATGG 2 cut(s) 1914, 3039
NdeI CATATG 1 cut(s) 3438
NheI GCTAGC 1 cut(s) 1087
NlaIV GGNNCC 9 cut(s) 432, 708, 1000, 1567, 1800, 2194, 2458, 2493, 2823
NmeAIII GCCGAG 2 cut(s) 382, 469
NmuCI GTSAC 2 cut(s) 2158, 3287
NsiI ATGCAT 3 cut(s) 202, 694, 3025
NspI RCATGY 5 cut(s) 200, 656, 1276, 1525, 2984
NspV TTCGAA 1 cut(s) 2733
OliI CACNNNNGTG 1 cut(s) 3294
PaeI GCATGC 2 cut(s) 200, 1525
PaeR7I CTCGAG 1 cut(s) 107
PceI AGGCCT 1 cut(s) 3532
PciSI GCTCTTC 1 cut(s) 1098
PctI GAATGC 3 cut(s) 101, 685, 694
PdmI GAANNNNTTC 2 cut(s) 399, 1977
PfeI GAWTC 4 cut(s) 857, 2501, 2686, 3343
PleI GAGTC 3 cut(s) 118, 2573, 3262
PpsI GAGTC 3 cut(s) 118, 2573, 3262
PpuMI RGGWCCY 2 cut(s) 431, 2821
PshAI GACNNNNGTC 1 cut(s) 777
PshBI ATTAAT 1 cut(s) 1752
Psp124BI GAGCTC 3 cut(s) 71, 1770, 3198
Psp5II RGGWCCY 2 cut(s) 431, 2821
Psp6I CCWGG 5 cut(s) 1579, 2030, 2350, 2559, 2786
PspFI CCCAGC 3 cut(s) 932, 1063, 2951
PspGI CCWGG 5 cut(s) 1579, 2030, 2350, 2559, 2786
PspN4I GGNNCC 9 cut(s) 432, 708, 1000, 1567, 1800, 2194, 2458, 2493, 2823
PspPI GGNCC 4 cut(s) 431, 2557, 2790, 2821
PspPPI RGGWCCY 2 cut(s) 431, 2821
PspXI VCTCGAGB 1 cut(s) 107
PstI CTGCAG 1 cut(s) 3090
PstNI CAGNNNCTG 2 cut(s) 1063, 3346
PsuI RGATCY 7 cut(s) 917, 1565, 1798, 2456, 2893, 3217, 3325
PvuII CAGCTG 1 cut(s) 1172
RsaI GTAC 4 cut(s) 914, 1683, 1843, 2546
RsaNI GTAC 4 cut(s) 913, 1682, 1842, 2545
RseI CAYNNNNRTG 5 cut(s) 747, 789, 2466, 3294, 3315
SacI GAGCTC 3 cut(s) 71, 1770, 3198
SalI GTCGAC 1 cut(s) 3178
SapI GCTCTTC 1 cut(s) 1098
Sau96I GGNCC 4 cut(s) 431, 2557, 2790, 2821
ScaI AGTACT 1 cut(s) 1683
SchI GAGTC 3 cut(s) 119, 2573, 3263
ScrFI CCNGG 6 cut(s) 927, 1581, 2032, 2352, 2561, 2788
SduI GDGCHC 8 cut(s) 71, 709, 1692, 1770, 1819, 2123, 2973, 3198
SfaNI GCATC 7 cut(s) 1050, 1690, 1723, 2268, 2818, 3010, 3038
SfcI CTRYAG 3 cut(s) 252, 1902, 3086
Sfr274I CTCGAG 1 cut(s) 107
SfuI TTCGAA 1 cut(s) 2733
SinI GGWCC 3 cut(s) 431, 2790, 2821
SlaI CTCGAG 1 cut(s) 107
SmiMI CAYNNNNRTG 5 cut(s) 747, 789, 2466, 3294, 3315
SmlI CTYRAG 5 cut(s) 107, 1216, 1277, 2180, 3251
SmoI CTYRAG 5 cut(s) 107, 1216, 1277, 2180, 3251
SphI GCATGC 2 cut(s) 200, 1525
SseBI AGGCCT 1 cut(s) 3532
SsiI CCGC 7 cut(s) 85, 133, 232, 535, 965, 3566, 3593
SspI AATATT 1 cut(s) 885
SstI GAGCTC 3 cut(s) 71, 1770, 3198
StuI AGGCCT 1 cut(s) 3532
StyD4I CCNGG 6 cut(s) 925, 1579, 2030, 2350, 2559, 2786
StyI CCWWGG 5 cut(s) 1914, 2964, 3039, 3238, 3335
TaiI ACGT 3 cut(s) 36, 1847, 3000
TaqI TCGA 8 cut(s) 60, 108, 113, 636, 1194, 1560, 2733, 3179
TatI WGTACW 2 cut(s) 912, 1681
TauI GCSGC 1 cut(s) 3596
TfiI GAWTC 4 cut(s) 857, 2501, 2686, 3343
TseFI GTSAC 2 cut(s) 2158, 3287
Tsp45I GTSAC 2 cut(s) 2158, 3287
TspGWI ACGGA 2 cut(s) 138, 3131
Vha464I CTTAAG 2 cut(s) 1216, 2180
VneI GTGCAC 1 cut(s) 1815
VpaK11BI GGWCC 3 cut(s) 431, 2790, 2821
VspI ATTAAT 1 cut(s) 1752
XapI RAATTY 9 cut(s) 186, 561, 803, 851, 905, 1575, 2004, 2648, 2699
XceI RCATGY 5 cut(s) 200, 656, 1276, 1525, 2984
XcmI CCANNNNNNNNNTGG 1 cut(s) 2348
XhoI CTCGAG 1 cut(s) 107
XmaJI CCTAGG 1 cut(s) 3335
XmiI GTMKAC 2 cut(s) 2337, 3179
XmnI GAANNNNTTC 2 cut(s) 399, 1977
ZrmI AGTACT 1 cut(s) 1683
Zsp2I ATGCAT 3 cut(s) 202, 694, 3025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.