pycom13g02840

Plays an essential role in chain termination during de novo fatty acid synthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0014724
Physical Location & Seq
Forward (+)
1943103 .. 1944973
1871 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g02840.6

Sequence Viewer

Length: 1278 bp
ATGGCCACCTTCTCTCATCTTGCCTACTTCCCTGTAAGGTGTTCTTCCTGCAGAGATAGCTATGATCCCAATAAGCAAAACCTGAGCAATATCAAGATCGATGGAACTTCCAAGAAACCCGCAACCAAAGTTGAAATGGCCGGTGTGGCAACGACTTCCATTTCCATGACTTTAGTAGTAAATGACTACGTGACTGAGCAGCAAGCCCGACAGAACATTCCGACAACCAAGCAGTCCGTTGATCATTTCCGACAAGGGTTCAGCATCGAAGGTGGCGTGGGGTACAGGCAGGGGGTTGTCATCAGGTCCTATGAGGTCGGGCCGGATAAAACTGCAACACTTGAGAGCGTCCTCAATCTGCTGCAGGAAACTGCATTGAACCATGTGTGGATGTCTGGACTCCTGAGTGATGGATTTGGAGCAACACATGAAATGATGAGGAATGATCTTATTTGGGTTGTGTCCAGAATGCAAGTTCAAGTTGACCAGTATCCAATCTGGTATGTCCAATCATCGCCTTTTCTTTTGATTAGATATGAAACAAATTTCAAGCCAAAAAATGTGACAATCACATCCTGCAGGGGAGAGGTACTGGAAATCGACACTTGGGTTCAAGCATCAGGGAAGAATGGTATGAAGCGAGACTGGTTGATCCGAAGCCAAGCCACGGGCCATGTTTTCGCTCGTGCGACCAGCACCTGGGTGATGATGAACCGGAAAACTAGGCGCCTTTCGAAAATGCCAGAGGGAGTGAGGGGTGAGATTGCACCTTGGTTCATAGAGAAGCAGGCAATCACAGACGATGTCCCTGAGAAAATCGTCAAGTTGGACAACAATGCTAAGTATGTCAACAGCGATCTGAAGCCCAAGAGAAGTGATTTGGACATGAACCACCATGTCAACAATGTCAAGTATGTAAGATGGATGCTTGAGACGATTCCTGACGATATTTTGGAGTCTCACCAACTGACTGGAATCACACTAGAATACAGAAAGGAATGTGGGAGTTCAGATATAGTTCAATCGCTTTGCGATCCAGAAGATGGAATGTTCATAGAGAGACTCAAACAAGAGAATCAAGATACAGGTTTACCGGATGGATTTTCTCTGGCAGCTGGAATTCTTGAGAACGGCGGGTTTTTGGGCTCCTTTGAGAAGCAACAATTGAGATATACACATCTCCTCCAAACAAATGGGAACCTTAAAGATGAAGAGATTGTTCGAGGACGGACTGTTTGGAAGAAAAAACCAGAGCCCTCCCCATTTGCTTCTATGTAG

Protein Analysis

426

Amino Acids

48.23

Weight (kDa)

7.12

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g26420
malus_domestica MD13G1032900.v1.1 MD16G1034900.v1.1
prunus_persica Prupe.1G319800_v2.0.a1
pyrus_communis pycom13g02840 pycom16g02970
rosa_chinensis RchiOBHm_Chr4g0434051
rosa_laevigata RLG00000006705
rosa_multiflora Rmu_sc0000352.1_g000027 Rmu_sc0000352.1_g000028
rosa_roxburghii Rroxscaffold_5G00375460
rosa_rugosa Rorug04G0273000
rosa_samantha Rh4AG328700 Rh4BG336000 Rh4CG351500 Rh4DG332400
rosa_wichuraiana Rw4G028500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 726
AccB7I CCANNNNNTGG 2 cut(s) 699, 1043
AciI CCGC 2 cut(s) 120, 1134
AclWI GGATC 3 cut(s) 59, 646, 1028
AcoI YGGCCR 2 cut(s) 3, 138
AcsI RAATTY 2 cut(s) 544, 1119
AcuI CTGAAG 1 cut(s) 881
AcyI GRCGYC 1 cut(s) 727
AfaI GTAC 2 cut(s) 284, 591
AfiI CCNNNNNNNGG 3 cut(s) 667, 699, 1043
AgsI TTSAA 6 cut(s) 134, 379, 479, 550, 614, 1022
AjnI CCWGG 1 cut(s) 698
AleI CACNNNNGTG 1 cut(s) 701
AluBI AGCT 2 cut(s) 60, 1115
AluI AGCT 2 cut(s) 60, 1115
Alw26I GTCTC 4 cut(s) 636, 926, 963, 1054
AlwI GGATC 3 cut(s) 59, 646, 1028
AlwNI CAGNNNCTG 1 cut(s) 699
AoxI GGCC 4 cut(s) 3, 138, 320, 670
ApeKI GCWGC 3 cut(s) 199, 361, 1112
ApoI RAATTY 2 cut(s) 544, 1119
ArsI GACNNNNNNTTYG 2 cut(s) 1218, 1250
AspLEI GCGC 1 cut(s) 729
AspS9I GGNCC 3 cut(s) 306, 320, 670
AsuHPI GGTGA 3 cut(s) 715, 770, 953
AsuII TTCGAA 1 cut(s) 734
AvaII GGWCC 1 cut(s) 306
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 726
BanII GRGCYC 2 cut(s) 1148, 1257
BauI CACGAG 1 cut(s) 684
BbvI GCAGC 3 cut(s) 211, 348, 1124
BccI CCATC 5 cut(s) 95, 404, 915, 1037, 1091
BceAI ACGGC 1 cut(s) 1147
BciT130I CCWGG 1 cut(s) 700
BciVI GTATCC 1 cut(s) 501
BclI TGATCA 1 cut(s) 241
BcoDI GTCTC 4 cut(s) 636, 926, 963, 1054
BfaI CTAG 2 cut(s) 723, 983
BfmI CTRYAG 3 cut(s) 49, 362, 577
BfoI RGCGCY 1 cut(s) 730
BfuI GTATCC 1 cut(s) 501
BglI GCCNNNNNGGC 1 cut(s) 146
BisI GCNGC 3 cut(s) 200, 362, 1113
BlsI GCNGC 3 cut(s) 201, 363, 1114
Bme1390I CCNGG 1 cut(s) 700
Bme18I GGWCC 1 cut(s) 306
BmgT120I GGNCC 3 cut(s) 306, 320, 670
BmiI GGNNCC 3 cut(s) 728, 1147, 1199
BmrFI CCNGG 1 cut(s) 700
BmsI GCATC 3 cut(s) 273, 626, 915
Bpu10I CCTNAGC 1 cut(s) 83
Bpu14I TTCGAA 1 cut(s) 734
BpuEI CTTGAG 3 cut(s) 362, 950, 1145
Bsa29I ATCGAT 1 cut(s) 99
BsaAI YACGTR 1 cut(s) 190
BsaHI GRCGYC 1 cut(s) 727
BsaJI CCNNGG 3 cut(s) 666, 699, 770
BsaWI WCCGGW 2 cut(s) 714, 1093
BsaXI ACNNNNNCTCC 2 cut(s) 1167, 1197
Bsc4I CCNNNNNNNGG 3 cut(s) 667, 699, 1043
Bse118I RCCGGY 1 cut(s) 140
Bse1I ACTGG 4 cut(s) 487, 597, 650, 976
BseBI CCWGG 1 cut(s) 700
BseCI ATCGAT 1 cut(s) 99
BseDI CCNNGG 3 cut(s) 666, 699, 770
BseGI GGATG 4 cut(s) 396, 572, 930, 1102
BseLI CCNNNNNNNGG 3 cut(s) 667, 699, 1043
BseMII CTCAG 4 cut(s) 74, 186, 395, 801
BseNI ACTGG 4 cut(s) 487, 597, 650, 976
BseRI GAGGAG 1 cut(s) 1172
BseXI GCAGC 3 cut(s) 211, 348, 1124
BshFI GGCC 4 cut(s) 5, 140, 322, 672
BshNI GGYRCC 1 cut(s) 726
BshVI ATCGAT 1 cut(s) 99
BsiSI CCGG 4 cut(s) 141, 323, 715, 1094
BslFI GGGAC 1 cut(s) 791
BslI CCNNNNNNNGG 3 cut(s) 667, 699, 1043
BsmAI GTCTC 4 cut(s) 636, 926, 963, 1054
BsmBI CGTCTC 1 cut(s) 926
BsmFI GGGAC 1 cut(s) 791
BsmI GAATGC 1 cut(s) 474
BsnI GGCC 4 cut(s) 5, 140, 322, 672
Bsp119I TTCGAA 1 cut(s) 734
Bsp1286I GDGCHC 2 cut(s) 1148, 1257
Bsp143I GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
BspACI CCGC 2 cut(s) 120, 1134
BspANI GGCC 4 cut(s) 5, 140, 322, 672
BspCNI CTCAG 4 cut(s) 75, 187, 396, 802
BspDI ATCGAT 1 cut(s) 99
BspLI GGNNCC 3 cut(s) 728, 1147, 1199
BspMAI CTGCAG 3 cut(s) 53, 366, 581
BspPI GGATC 3 cut(s) 59, 646, 1028
BspT104I TTCGAA 1 cut(s) 734
BspT107I GGYRCC 1 cut(s) 726
BsrFI RCCGGY 1 cut(s) 140
BsrI ACTGG 4 cut(s) 487, 597, 650, 976
BssAI RCCGGY 1 cut(s) 140
BssECI CCNNGG 3 cut(s) 666, 699, 770
BssMI GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
BssNI GRCGYC 1 cut(s) 727
BssSI CACGAG 1 cut(s) 684
BssT1I CCWWGG 1 cut(s) 770
Bst2BI CACGAG 1 cut(s) 684
Bst2UI CCWGG 1 cut(s) 700
Bst4CI ACNGT 1 cut(s) 1234
Bst6I CTCTTC 1 cut(s) 1206
BstACI GRCGYC 1 cut(s) 727
BstBAI YACGTR 1 cut(s) 190
BstBI TTCGAA 1 cut(s) 734
BstC8I GCNNGC 2 cut(s) 204, 789
BstDEI CTNAG 5 cut(s) 83, 195, 404, 810, 840
BstDSI CCRYGG 1 cut(s) 666
BstF5I GGATG 4 cut(s) 396, 572, 930, 1102
BstH2I RGCGCY 1 cut(s) 730
BstHHI GCGC 1 cut(s) 729
BstKTI GATC 7 cut(s) 67, 99, 244, 448, 654, 859, 1036
BstMAI GTCTC 4 cut(s) 636, 926, 963, 1054
BstMBI GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
BstMWI GCNNNNNNNGC 2 cut(s) 57, 146
BstNI CCWGG 1 cut(s) 700
BstSCI CCNGG 1 cut(s) 698
BstSFI CTRYAG 3 cut(s) 49, 362, 577
BstV1I GCAGC 3 cut(s) 211, 348, 1124
BstXI CCANNNNNNTGG 2 cut(s) 971, 1193
Bsu15I ATCGAT 1 cut(s) 99
BsuI GTATCC 1 cut(s) 501
BsuRI GGCC 4 cut(s) 5, 140, 322, 672
BsuTUI ATCGAT 1 cut(s) 99
BtgI CCRYGG 1 cut(s) 666
BtgZI GCGATG 1 cut(s) 498
BtsCI GGATG 4 cut(s) 396, 572, 930, 1102
Cac8I GCNNGC 2 cut(s) 204, 789
CaiI CAGNNNCTG 1 cut(s) 699
CfoI GCGC 1 cut(s) 729
Cfr10I RCCGGY 1 cut(s) 140
Cfr13I GGNCC 3 cut(s) 306, 320, 670
ClaI ATCGAT 1 cut(s) 99
CseI GACGC 1 cut(s) 337
Csp6I GTAC 2 cut(s) 283, 590
CviAII CATG 6 cut(s) 166, 383, 428, 674, 886, 896
CviQI GTAC 2 cut(s) 283, 590
DdeI CTNAG 5 cut(s) 83, 195, 404, 810, 840
DinI GGCGCC 1 cut(s) 728
DpnI GATC 7 cut(s) 66, 98, 243, 447, 653, 858, 1035
DpnII GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
EaeI YGGCCR 2 cut(s) 3, 138
Eam1104I CTCTTC 1 cut(s) 1206
EarI CTCTTC 1 cut(s) 1206
Eco130I CCWWGG 1 cut(s) 770
Eco24I GRGCYC 2 cut(s) 1148, 1257
Eco47I GGWCC 1 cut(s) 306
Eco57I CTGAAG 1 cut(s) 881
EcoO109I RGGNCCY 1 cut(s) 306
EcoRI GAATTC 1 cut(s) 1119
EcoRII CCWGG 1 cut(s) 698
EcoT14I CCWWGG 1 cut(s) 770
EcoT38I GRGCYC 2 cut(s) 1148, 1257
EgeI GGCGCC 1 cut(s) 728
EheI GGCGCC 1 cut(s) 728
ErhI CCWWGG 1 cut(s) 770
Esp3I CGTCTC 1 cut(s) 926
FaeI CATG 6 cut(s) 169, 386, 431, 677, 889, 899
FalI AAGNNNNNCTT 2 cut(s) 28, 60
FaqI GGGAC 1 cut(s) 791
FatI CATG 6 cut(s) 165, 382, 427, 673, 885, 895
FauI CCCGC 2 cut(s) 127, 1127
FbaI TGATCA 1 cut(s) 241
Fnu4HI GCNGC 3 cut(s) 200, 362, 1113
FokI GGATG 4 cut(s) 403, 559, 937, 1109
FriOI GRGCYC 2 cut(s) 1148, 1257
Fsp4HI GCNGC 3 cut(s) 200, 362, 1113
FspBI CTAG 2 cut(s) 723, 983
GlaI GCGC 1 cut(s) 728
GluI GCNGC 3 cut(s) 200, 362, 1113
HaeII RGCGCY 1 cut(s) 730
HaeIII GGCC 4 cut(s) 5, 140, 322, 672
HapII CCGG 4 cut(s) 141, 323, 715, 1094
HgaI GACGC 1 cut(s) 337
HhaI GCGC 1 cut(s) 729
Hin1I GRCGYC 1 cut(s) 727
Hin1II CATG 6 cut(s) 169, 386, 431, 677, 889, 899
Hin6I GCGC 1 cut(s) 727
HinP1I GCGC 1 cut(s) 727
HincII GTYRAC 3 cut(s) 484, 850, 901
HindII GTYRAC 3 cut(s) 484, 850, 901
HinfI GANTC 6 cut(s) 399, 937, 956, 975, 1062, 1075
HpaII CCGG 4 cut(s) 141, 323, 715, 1094
HphI GGTGA 3 cut(s) 715, 770, 953
Hpy166II GTNNAC 4 cut(s) 484, 850, 901, 1091
Hpy188I TCNGA 5 cut(s) 222, 251, 656, 861, 1012
Hpy188III TCNNGA 8 cut(s) 94, 396, 403, 465, 941, 1037, 1079, 1124
Hpy8I GTNNAC 4 cut(s) 484, 850, 901, 1091
HpyAV CCTTC 2 cut(s) 19, 263
HpyCH4III ACNGT 1 cut(s) 1234
HpyCH4IV ACGT 1 cut(s) 189
HpyCH4V TGCA 7 cut(s) 51, 335, 364, 374, 472, 579, 767
HpyF10VI GCNNNNNNNGC 2 cut(s) 57, 146
HpyF3I CTNAG 5 cut(s) 83, 195, 404, 810, 840
HpySE526I ACGT 1 cut(s) 189
Hsp92I GRCGYC 1 cut(s) 727
Hsp92II CATG 6 cut(s) 169, 386, 431, 677, 889, 899
HspAI GCGC 1 cut(s) 727
KasI GGCGCC 1 cut(s) 726
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
LmnI GCTCC 2 cut(s) 419, 1151
Lsp1109I GCAGC 3 cut(s) 211, 348, 1124
LweI GCATC 3 cut(s) 273, 626, 915
MaeI CTAG 2 cut(s) 723, 983
MaeII ACGT 1 cut(s) 189
MaeIII GTNAC 2 cut(s) 190, 562
MalI GATC 7 cut(s) 66, 98, 243, 447, 653, 858, 1035
MboI GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
MboII GAAGA 5 cut(s) 36, 637, 1052, 1223, 1252
MfeI CAATTG 1 cut(s) 1163
MhlI GDGCHC 2 cut(s) 1148, 1257
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 544, 1119, 1163
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 727
MlyI GAGTC 3 cut(s) 393, 965, 1056
MmeI TCCRAC 3 cut(s) 245, 274, 807
MnlI CCTC 9 cut(s) 307, 362, 432, 580, 739, 747, 1193, 1217, 1267
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 1203
MslI CAYNNNNRTG 2 cut(s) 164, 701
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1115
MspI CCGG 4 cut(s) 141, 323, 715, 1094
MspR9I CCNGG 1 cut(s) 700
MunI CAATTG 1 cut(s) 1163
Mva1269I GAATGC 1 cut(s) 474
MvaI CCWGG 1 cut(s) 700
MwoI GCNNNNNNNGC 2 cut(s) 57, 146
NarI GGCGCC 1 cut(s) 727
NdeII GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
NlaIII CATG 6 cut(s) 169, 386, 431, 677, 889, 899
NlaIV GGNNCC 3 cut(s) 728, 1147, 1199
NmuCI GTSAC 2 cut(s) 190, 562
NspV TTCGAA 1 cut(s) 734
OliI CACNNNNGTG 1 cut(s) 701
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PctI GAATGC 1 cut(s) 474
PfeI GAWTC 3 cut(s) 937, 975, 1075
PflFI GACNNNGTC 1 cut(s) 803
PflMI CCANNNNNTGG 2 cut(s) 699, 1043
PkrI GCNGC 3 cut(s) 201, 363, 1114
PleI GAGTC 3 cut(s) 393, 964, 1056
PluTI GGCGCC 1 cut(s) 730
PpsI GAGTC 3 cut(s) 393, 964, 1056
Ppu21I YACGTR 1 cut(s) 190
PpuMI RGGWCCY 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 306
Psp6I CCWGG 1 cut(s) 698
PspGI CCWGG 1 cut(s) 698
PspN4I GGNNCC 3 cut(s) 728, 1147, 1199
PspPI GGNCC 3 cut(s) 306, 320, 670
PspPPI RGGWCCY 1 cut(s) 306
PstI CTGCAG 3 cut(s) 53, 366, 581
PstNI CAGNNNCTG 1 cut(s) 699
PsyI GACNNNGTC 1 cut(s) 803
PvuII CAGCTG 1 cut(s) 1115
RsaI GTAC 2 cut(s) 284, 591
RsaNI GTAC 2 cut(s) 283, 590
RseI CAYNNNNRTG 2 cut(s) 164, 701
SaqAI TTAA 1 cut(s) 1203
SatI GCNGC 3 cut(s) 200, 362, 1113
Sau3AI GATC 7 cut(s) 64, 96, 241, 445, 651, 856, 1033
Sau96I GGNCC 3 cut(s) 306, 320, 670
SbfI CCTGCAGG 1 cut(s) 581
SchI GAGTC 3 cut(s) 393, 965, 1056
ScrFI CCNGG 1 cut(s) 700
SdaI CCTGCAGG 1 cut(s) 581
SduI GDGCHC 2 cut(s) 1148, 1257
SfaNI GCATC 3 cut(s) 273, 626, 915
SfcI CTRYAG 3 cut(s) 49, 362, 577
SfoI GGCGCC 1 cut(s) 728
SfuI TTCGAA 1 cut(s) 734
SinI GGWCC 1 cut(s) 306
SmiMI CAYNNNNRTG 2 cut(s) 164, 701
SmlI CTYRAG 3 cut(s) 341, 929, 1124
SmoI CTYRAG 3 cut(s) 341, 929, 1124
Sse8387I CCTGCAGG 1 cut(s) 581
Sse9I AATT 3 cut(s) 544, 1119, 1163
SsiI CCGC 2 cut(s) 120, 1134
SspDI GGCGCC 1 cut(s) 726
SspMI CTAG 2 cut(s) 723, 983
StyD4I CCNGG 1 cut(s) 698
StyI CCWWGG 1 cut(s) 770
TaaI ACNGT 1 cut(s) 1234
TaiI ACGT 1 cut(s) 192
TaqI TCGA 5 cut(s) 99, 267, 600, 734, 1222
TasI AATT 3 cut(s) 544, 1119, 1163
TfiI GAWTC 3 cut(s) 937, 975, 1075
Tru1I TTAA 1 cut(s) 1203
Tru9I TTAA 1 cut(s) 1203
TseFI GTSAC 2 cut(s) 190, 562
TseI GCWGC 3 cut(s) 199, 361, 1112
Tsp45I GTSAC 2 cut(s) 190, 562
TspDTI ATGAA 8 cut(s) 444, 552, 650, 725, 766, 902, 1042, 1224
TspGWI ACGGA 2 cut(s) 226, 1243
Tth111I GACNNNGTC 1 cut(s) 803
Van91I CCANNNNNTGG 2 cut(s) 699, 1043
VpaK11BI GGWCC 1 cut(s) 306
XapI RAATTY 2 cut(s) 544, 1119
XcmI CCANNNNNNNNNTGG 1 cut(s) 133
XspI CTAG 2 cut(s) 723, 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.