Rmu_sc0000352.1_g000027

Plays an essential role in chain termination during de novo fatty acid synthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000352.1
OG0014724
Physical Location & Seq
Forward (+)
109238 .. 110675
1438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000352.1_g000027.1.cds

Sequence Viewer

Length: 873 bp
atggccaccttctcaactctagcctacttccccattacaattaggttatcctggaatagggccagttatgatccgaacaagaagagcccgagcagcatcaagattaatggtacttcaacaaagtccacaaccaagcttgacatggcaagcgctttaacctcagttgcttatattagtgaacagcaagttcgacagaatattccgacaaccaagcagtttgtcgatcattatcgccaagggatgatcatcgaaggtggtgtagggtacagacagagggtggttattaggtcttatgaagtcggtcctgataaaactgtaacattggagagcatccttaatcttctgcaggaaacagcattgaatcatgtgtggatgtcaggactcctcagtgatgggtttggagcaactcatggaatgatgaagcatgatctcatatgggttgtgtcaagaatgcaagttgaagttgatcactatccaatctggggagaagtattggaaattgacacttgggttggggcatcagggaagaatggtatgcgtcgagactggttaatccgaagtgaagccacaggtcatgtttttgctagtgcaaccaggtatcctctagcctcttgctatcgcttcctcctctccatagatgccgtcacaacaatctttgctgcccctcttgctctcgcagcgggtggtagcaccccggatctgggaaagattggcggtggtcctatgtgcaggtcctctcaatcttttctacttggcatacctttgatcgaggatgactatgatgtgcctcttgtcactctgaagaagaagacgggtagaccgtcggaagtaagaacaagagccaacgtcccagtaactacaattggaggttag

Protein Analysis

290

Amino Acids

31.85

Weight (kDa)

9.15

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g26420
malus_domestica MD13G1032900.v1.1 MD16G1034900.v1.1
prunus_persica Prupe.1G319800_v2.0.a1
pyrus_communis pycom13g02840 pycom16g02970
rosa_chinensis RchiOBHm_Chr4g0434051
rosa_laevigata RLG00000006705
rosa_multiflora Rmu_sc0000352.1_g000027 Rmu_sc0000352.1_g000028
rosa_roxburghii Rroxscaffold_5G00375460
rosa_rugosa Rorug04G0273000
rosa_samantha Rh4AG328700 Rh4BG336000 Rh4CG351500 Rh4DG332400
rosa_wichuraiana Rw4G028500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 720
AccI GTMKAC 1 cut(s) 817
AciI CCGC 2 cut(s) 680, 714
AclWI GGATC 2 cut(s) 65, 705
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 821
AfaI GTAC 2 cut(s) 112, 266
AfeI AGCGCT 1 cut(s) 151
AfiI CCNNNNNNNGG 4 cut(s) 57, 482, 700, 701
AgsI TTSAA 3 cut(s) 117, 361, 461
AjnI CCWGG 2 cut(s) 50, 593
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Alw26I GTCTC 1 cut(s) 537
AlwI GGATC 2 cut(s) 65, 705
Ama87I CYCGRG 1 cut(s) 88
Aor51HI AGCGCT 1 cut(s) 151
AoxI GGCC 2 cut(s) 3, 60
ApeKI GCWGC 3 cut(s) 93, 659, 677
AseI ATTAAT 1 cut(s) 105
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 4 cut(s) 60, 302, 719, 732
AsuC2I CCSGG 1 cut(s) 695
AvaI CYCGRG 1 cut(s) 88
AvaII GGWCC 3 cut(s) 302, 719, 732
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 89
BbsI GAAGAC 1 cut(s) 815
BbvI GCAGC 3 cut(s) 105, 646, 689
BccI CCATC 1 cut(s) 386
BceAI ACGGC 1 cut(s) 626
BciT130I CCWGG 2 cut(s) 52, 595
BciVI GTATCC 1 cut(s) 609
BclI TGATCA 2 cut(s) 243, 466
BcnI CCSGG 1 cut(s) 695
BcoDI GTCTC 1 cut(s) 537
BfaI CTAG 3 cut(s) 20, 585, 605
BfmI CTRYAG 1 cut(s) 344
BfoI RGCGCY 1 cut(s) 153
BfuAI ACCTGC 1 cut(s) 720
BfuI GTATCC 1 cut(s) 609
BisI GCNGC 3 cut(s) 94, 660, 678
BlsI GCNGC 3 cut(s) 95, 661, 679
Bme1390I CCNGG 3 cut(s) 52, 595, 695
Bme18I GGWCC 3 cut(s) 302, 719, 732
BmeT110I CYCGRG 1 cut(s) 88
BmgT120I GGNCC 4 cut(s) 60, 302, 719, 732
BmrFI CCNGG 3 cut(s) 52, 595, 695
BmrI ACTGGG 1 cut(s) 845
BmsI GCATC 4 cut(s) 105, 339, 527, 628
BmuI ACTGGG 1 cut(s) 845
BpiI GAAGAC 1 cut(s) 815
BpuMI CCSGG 1 cut(s) 695
BsaBI GATNNNNATC 3 cut(s) 228, 245, 471
BsaJI CCNNGG 2 cut(s) 235, 693
Bsc4I CCNNNNNNNGG 4 cut(s) 57, 482, 700, 701
Bse1I ACTGG 3 cut(s) 63, 551, 851
Bse8I GATNNNNATC 3 cut(s) 228, 245, 471
BseBI CCWGG 2 cut(s) 52, 595
BseDI CCNNGG 2 cut(s) 235, 693
BseGI GGATG 4 cut(s) 246, 330, 378, 778
BseJI GATNNNNATC 3 cut(s) 228, 245, 471
BseLI CCNNNNNNNGG 4 cut(s) 57, 482, 700, 701
BseMII CTCAG 2 cut(s) 174, 400
BseNI ACTGG 3 cut(s) 63, 551, 851
BseRI GAGGAG 2 cut(s) 374, 617
BseXI GCAGC 3 cut(s) 105, 646, 689
BsgI GTGCAG 1 cut(s) 748
BshFI GGCC 2 cut(s) 5, 62
BsiHKCI CYCGRG 1 cut(s) 88
BsiSI CCGG 1 cut(s) 695
BslFI GGGAC 1 cut(s) 833
BslI CCNNNNNNNGG 4 cut(s) 57, 482, 700, 701
BsmAI GTCTC 1 cut(s) 537
BsmFI GGGAC 1 cut(s) 833
BsmI GAATGC 1 cut(s) 456
BsnI GGCC 2 cut(s) 5, 62
BsoBI CYCGRG 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 89
Bsp143I GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
BspACI CCGC 2 cut(s) 680, 714
BspANI GGCC 2 cut(s) 5, 62
BspCNI CTCAG 2 cut(s) 173, 399
BspMAI CTGCAG 1 cut(s) 348
BspMI ACCTGC 1 cut(s) 720
BspPI GGATC 2 cut(s) 65, 705
BspQI GCTCTTC 1 cut(s) 77
BsrI ACTGG 3 cut(s) 63, 551, 851
BssECI CCNNGG 2 cut(s) 235, 693
BssMI GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
BssT1I CCWWGG 1 cut(s) 235
Bst2UI CCWGG 2 cut(s) 52, 595
Bst4CI ACNGT 2 cut(s) 316, 822
Bst6I CTCTTC 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 148
BstDEI CTNAG 2 cut(s) 160, 386
BstENI CCTNNNNNAGG 1 cut(s) 55
BstF5I GGATG 4 cut(s) 246, 330, 378, 778
BstH2I RGCGCY 1 cut(s) 153
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 7 cut(s) 73, 226, 246, 430, 469, 700, 768
BstMAI GTCTC 1 cut(s) 537
BstMBI GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
BstMWI GCNNNNNNNGC 3 cut(s) 93, 668, 677
BstNI CCWGG 2 cut(s) 52, 595
BstSCI CCNGG 3 cut(s) 50, 593, 693
BstSFI CTRYAG 1 cut(s) 344
BstV1I GCAGC 3 cut(s) 105, 646, 689
BstV2I GAAGAC 1 cut(s) 815
BstX2I RGATCY 1 cut(s) 697
BstYI RGATCY 1 cut(s) 697
BsuI GTATCC 1 cut(s) 609
BsuRI GGCC 2 cut(s) 5, 62
BtsCI GGATG 4 cut(s) 246, 330, 378, 778
BtsIMutI CAGTG 1 cut(s) 394
BveI ACCTGC 1 cut(s) 720
Cac8I GCNNGC 1 cut(s) 148
CfoI GCGC 1 cut(s) 152
Cfr13I GGNCC 4 cut(s) 60, 302, 719, 732
CseI GACGC 1 cut(s) 527
CsiI ACCWGGT 1 cut(s) 593
Csp6I GTAC 2 cut(s) 111, 265
CviAII CATG 5 cut(s) 142, 365, 410, 425, 575
CviJI RGCY 8 cut(s) 5, 23, 62, 87, 136, 566, 608, 842
CviKI_1 RGCY 8 cut(s) 5, 23, 62, 87, 136, 566, 608, 842
CviQI GTAC 2 cut(s) 111, 265
DdeI CTNAG 2 cut(s) 160, 386
DpnI GATC 7 cut(s) 72, 225, 245, 429, 468, 699, 767
DpnII GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
Eco130I CCWWGG 1 cut(s) 235
Eco24I GRGCYC 1 cut(s) 89
Eco47I GGWCC 3 cut(s) 302, 719, 732
Eco47III AGCGCT 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 821
Eco88I CYCGRG 1 cut(s) 88
EcoNI CCTNNNNNAGG 1 cut(s) 55
EcoO109I RGGNCCY 1 cut(s) 732
EcoRII CCWGG 2 cut(s) 50, 593
EcoT14I CCWWGG 1 cut(s) 235
EcoT38I GRGCYC 1 cut(s) 89
ErhI CCWWGG 1 cut(s) 235
FaeI CATG 5 cut(s) 145, 368, 413, 428, 578
FaqI GGGAC 1 cut(s) 833
FatI CATG 5 cut(s) 141, 364, 409, 424, 574
FauI CCCGC 1 cut(s) 673
FauNDI CATATG 1 cut(s) 434
FbaI TGATCA 2 cut(s) 243, 466
FblI GTMKAC 1 cut(s) 817
Fnu4HI GCNGC 3 cut(s) 94, 660, 678
FokI GGATG 4 cut(s) 253, 317, 385, 785
FriOI GRGCYC 1 cut(s) 89
Fsp4HI GCNGC 3 cut(s) 94, 660, 678
FspBI CTAG 3 cut(s) 20, 585, 605
GlaI GCGC 1 cut(s) 151
GluI GCNGC 3 cut(s) 94, 660, 678
HaeII RGCGCY 1 cut(s) 153
HaeIII GGCC 2 cut(s) 5, 62
HapII CCGG 1 cut(s) 695
HgaI GACGC 1 cut(s) 527
HhaI GCGC 1 cut(s) 152
Hin1II CATG 5 cut(s) 145, 368, 413, 428, 578
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HindIII AAGCTT 1 cut(s) 134
HinfI GANTC 2 cut(s) 361, 381
HpaII CCGG 1 cut(s) 695
Hpy166II GTNNAC 3 cut(s) 126, 179, 818
Hpy188I TCNGA 5 cut(s) 75, 204, 557, 801, 826
Hpy188III TCNNGA 5 cut(s) 100, 305, 378, 447, 542
Hpy8I GTNNAC 3 cut(s) 126, 179, 818
Hpy99I CGWCG 2 cut(s) 543, 826
HpyAV CCTTC 2 cut(s) 19, 245
HpyCH4III ACNGT 2 cut(s) 316, 822
HpyCH4IV ACGT 1 cut(s) 846
HpyCH4V TGCA 4 cut(s) 346, 454, 590, 729
HpyF10VI GCNNNNNNNGC 3 cut(s) 93, 668, 677
HpyF3I CTNAG 2 cut(s) 160, 386
HpySE526I ACGT 1 cut(s) 846
Hsp92II CATG 5 cut(s) 145, 368, 413, 428, 578
HspAI GCGC 1 cut(s) 150
Ksp22I TGATCA 2 cut(s) 243, 466
Kzo9I GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
LguI GCTCTTC 1 cut(s) 77
LmnI GCTCC 1 cut(s) 401
Lsp1109I GCAGC 3 cut(s) 105, 646, 689
LweI GCATC 4 cut(s) 105, 339, 527, 628
MabI ACCWGGT 1 cut(s) 593
MaeI CTAG 3 cut(s) 20, 585, 605
MaeII ACGT 1 cut(s) 846
MaeIII GTNAC 4 cut(s) 316, 643, 793, 853
MalI GATC 7 cut(s) 72, 225, 245, 429, 468, 699, 767
MboI GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
MboII GAAGA 6 cut(s) 94, 332, 538, 814, 817, 820
MfeI CAATTG 1 cut(s) 861
MflI RGATCY 1 cut(s) 697
MhlI GDGCHC 1 cut(s) 89
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 39, 498, 861
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 375
MmeI TCCRAC 2 cut(s) 227, 804
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 105, 155, 336, 551
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 680
MspI CCGG 1 cut(s) 695
MspR9I CCNGG 3 cut(s) 52, 595, 695
MunI CAATTG 1 cut(s) 861
Mva1269I GAATGC 1 cut(s) 456
MvaI CCWGG 2 cut(s) 52, 595
MwoI GCNNNNNNNGC 3 cut(s) 93, 668, 677
NciI CCSGG 1 cut(s) 695
NdeI CATATG 1 cut(s) 434
NdeII GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
NlaIII CATG 5 cut(s) 145, 368, 413, 428, 578
NmuCI GTSAC 2 cut(s) 643, 793
PciSI GCTCTTC 1 cut(s) 77
PcsI WCGNNNNNNNCGW 1 cut(s) 818
PctI GAATGC 1 cut(s) 456
PfeI GAWTC 1 cut(s) 361
PfoI TCCNGGA 1 cut(s) 50
PkrI GCNGC 3 cut(s) 95, 661, 679
PleI GAGTC 1 cut(s) 375
PpsI GAGTC 1 cut(s) 375
PpuMI RGGWCCY 1 cut(s) 732
PshBI ATTAAT 1 cut(s) 105
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 2 cut(s) 50, 593
PspGI CCWGG 2 cut(s) 50, 593
PspPI GGNCC 4 cut(s) 60, 302, 719, 732
PspPPI RGGWCCY 1 cut(s) 732
PstI CTGCAG 1 cut(s) 348
PsuI RGATCY 1 cut(s) 697
RsaI GTAC 2 cut(s) 112, 266
RsaNI GTAC 2 cut(s) 111, 265
SapI GCTCTTC 1 cut(s) 77
SaqAI TTAA 4 cut(s) 105, 155, 336, 551
SatI GCNGC 3 cut(s) 94, 660, 678
Sau3AI GATC 7 cut(s) 70, 223, 243, 427, 466, 697, 765
Sau96I GGNCC 4 cut(s) 60, 302, 719, 732
SchI GAGTC 1 cut(s) 375
ScrFI CCNGG 3 cut(s) 52, 595, 695
SduI GDGCHC 1 cut(s) 89
SexAI ACCWGGT 1 cut(s) 593
SfaNI GCATC 4 cut(s) 105, 339, 527, 628
SfcI CTRYAG 1 cut(s) 344
SinI GGWCC 3 cut(s) 302, 719, 732
Sse9I AATT 3 cut(s) 39, 498, 861
SsiI CCGC 2 cut(s) 680, 714
SspI AATATT 1 cut(s) 199
SspMI CTAG 3 cut(s) 20, 585, 605
StyD4I CCNGG 3 cut(s) 50, 593, 693
StyI CCWWGG 1 cut(s) 235
TaaI ACNGT 2 cut(s) 316, 822
TaiI ACGT 1 cut(s) 849
TaqI TCGA 5 cut(s) 190, 222, 249, 541, 768
TaqII GACCGA 1 cut(s) 290
TasI AATT 3 cut(s) 39, 498, 861
TfiI GAWTC 1 cut(s) 361
Tru1I TTAA 4 cut(s) 105, 155, 336, 551
Tru9I TTAA 4 cut(s) 105, 155, 336, 551
TscAI CASTG 1 cut(s) 394
TseFI GTSAC 2 cut(s) 643, 793
TseI GCWGC 3 cut(s) 93, 659, 677
Tsp45I GTSAC 2 cut(s) 643, 793
TspDTI ATGAA 2 cut(s) 309, 434
TspRI CASTG 1 cut(s) 394
VpaK11BI GGWCC 3 cut(s) 302, 719, 732
VspI ATTAAT 1 cut(s) 105
XagI CCTNNNNNAGG 1 cut(s) 55
XcmI CCANNNNNNNNNTGG 1 cut(s) 139
XmiI GTMKAC 1 cut(s) 817
XspI CTAG 3 cut(s) 20, 585, 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.