Squamosa promoter-binding-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43270 AT5G43270 AT5G43270 |
| fragaria_vesca | FvH4_4g23650 FvH4_4g23650 FvH4_4g23650 FvH4_4g23650 FvH4_4g23650 |
| malus_domestica | MD13G1120300.v1.1 MD16G1120300.v1.1 |
| prunus_persica | Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 |
| pyrus_communis | pycom13g10470 pycom16g10280 |
| rosa_chinensis | RchiOBHm_Chr4g0430121 |
| rosa_laevigata | RLG00000007002 |
| rosa_multiflora | Rmu_co8521931.1_g000002 Rmu_ssc0000150.1_g000023 |
| rosa_roxburghii | Rroxscaffold_5G00371930 |
| rosa_rugosa | Rorug04G0240300 Rorug04G0240400 Rorug04G0240400 Rorug04G0240500 Rorug04G0240600 |
| rosa_samantha | Rh4AG297400 Rh4BG303800 Rh4CG319400 Rh4DG301300 |
| rosa_wichuraiana | Rw4G025790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 720, 1348 |
| AciI | CCGC | 3 cut(s) | 427, 724, 1031 |
| AclWI | GGATC | 2 cut(s) | 367, 1338 |
| AcsI | RAATTY | 3 cut(s) | 4, 853, 949 |
| AcuI | CTGAAG | 4 cut(s) | 321, 363, 1077, 1227 |
| AcyI | GRCGYC | 2 cut(s) | 721, 1349 |
| AfaI | GTAC | 2 cut(s) | 434, 1250 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1205, 1327 |
| AflIII | ACRYGT | 1 cut(s) | 1288 |
| AgsI | TTSAA | 7 cut(s) | 131, 148, 286, 566, 852, 1078, 1345 |
| AjnI | CCWGG | 3 cut(s) | 938, 970, 1080 |
| AluBI | AGCT | 6 cut(s) | 242, 341, 347, 418, 946, 1182 |
| AluI | AGCT | 6 cut(s) | 242, 341, 347, 418, 946, 1182 |
| Alw21I | GWGCWC | 1 cut(s) | 1111 |
| Alw26I | GTCTC | 5 cut(s) | 369, 461, 742, 1243, 1297 |
| AlwI | GGATC | 2 cut(s) | 367, 1338 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 245 |
| AoxI | GGCC | 1 cut(s) | 351 |
| ApeKI | GCWGC | 2 cut(s) | 570, 943 |
| ApoI | RAATTY | 3 cut(s) | 4, 853, 949 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 65 |
| AspLEI | GCGC | 2 cut(s) | 723, 1351 |
| AspS9I | GGNCC | 2 cut(s) | 352, 824 |
| AsuHPI | GGTGA | 4 cut(s) | 36, 188, 1005, 1361 |
| AsuII | TTCGAA | 2 cut(s) | 233, 438 |
| AvaII | GGWCC | 1 cut(s) | 824 |
| BanI | GGYRCC | 2 cut(s) | 720, 1348 |
| BanII | GRGCYC | 1 cut(s) | 402 |
| BauI | CACGAG | 1 cut(s) | 871 |
| BbsI | GAAGAC | 3 cut(s) | 288, 447, 759 |
| Bbv12I | GWGCWC | 1 cut(s) | 1111 |
| BbvCI | CCTCAGC | 2 cut(s) | 348, 1035 |
| BbvI | GCAGC | 2 cut(s) | 557, 955 |
| BccI | CCATC | 8 cut(s) | 13, 173, 209, 612, 653, 860, 1024, 1276 |
| BceAI | ACGGC | 1 cut(s) | 1336 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 967, 1001 |
| BciT130I | CCWGG | 3 cut(s) | 940, 972, 1082 |
| BclI | TGATCA | 1 cut(s) | 706 |
| BcoDI | GTCTC | 5 cut(s) | 369, 461, 742, 1243, 1297 |
| BfoI | RGCGCY | 2 cut(s) | 724, 1352 |
| BisI | GCNGC | 4 cut(s) | 571, 724, 944, 1032 |
| BlsI | GCNGC | 4 cut(s) | 572, 725, 945, 1033 |
| BmcAI | AGTACT | 1 cut(s) | 1250 |
| Bme1390I | CCNGG | 3 cut(s) | 940, 972, 1082 |
| Bme18I | GGWCC | 1 cut(s) | 824 |
| BmgT120I | GGNCC | 2 cut(s) | 352, 824 |
| BmiI | GGNNCC | 2 cut(s) | 722, 1350 |
| BmrFI | CCNGG | 3 cut(s) | 940, 972, 1082 |
| BmrI | ACTGGG | 2 cut(s) | 130, 180 |
| BmsI | GCATC | 4 cut(s) | 557, 1075, 1200, 1273 |
| BmuI | ACTGGG | 2 cut(s) | 130, 180 |
| BoxI | GACNNNNGTC | 1 cut(s) | 822 |
| BpiI | GAAGAC | 3 cut(s) | 288, 447, 759 |
| BpmI | CTGGAG | 1 cut(s) | 954 |
| Bpu10I | CCTNAGC | 2 cut(s) | 348, 1035 |
| Bpu14I | TTCGAA | 2 cut(s) | 233, 438 |
| BpuEI | CTTGAG | 2 cut(s) | 866, 1209 |
| BsaBI | GATNNNNATC | 3 cut(s) | 603, 1101, 1335 |
| BsaHI | GRCGYC | 2 cut(s) | 721, 1349 |
| BsaI | GGTCTC | 2 cut(s) | 461, 1243 |
| BsaJI | CCNNGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1205, 1327 |
| Bse118I | RCCGGY | 2 cut(s) | 672, 1234 |
| Bse1I | ACTGG | 4 cut(s) | 125, 175, 1002, 1256 |
| Bse3DI | GCAATG | 2 cut(s) | 940, 1224 |
| Bse8I | GATNNNNATC | 3 cut(s) | 603, 1101, 1335 |
| BseBI | CCWGG | 3 cut(s) | 940, 972, 1082 |
| BseDI | CCNNGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| BseGI | GGATG | 6 cut(s) | 435, 871, 1090, 1215, 1264, 1268 |
| BseJI | GATNNNNATC | 3 cut(s) | 603, 1101, 1335 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1205, 1327 |
| BseMI | GCAATG | 2 cut(s) | 940, 1224 |
| BseMII | CTCAG | 5 cut(s) | 339, 421, 548, 1011, 1026 |
| BseNI | ACTGG | 4 cut(s) | 125, 175, 1002, 1256 |
| BseXI | GCAGC | 2 cut(s) | 557, 955 |
| BseYI | CCCAGC | 1 cut(s) | 754 |
| BsgI | GTGCAG | 1 cut(s) | 471 |
| Bsh1285I | CGRYCG | 1 cut(s) | 261 |
| BshFI | GGCC | 1 cut(s) | 353 |
| BshNI | GGYRCC | 2 cut(s) | 720, 1348 |
| BsiEI | CGRYCG | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1111 |
| BsiSI | CCGG | 3 cut(s) | 198, 673, 1235 |
| BslFI | GGGAC | 1 cut(s) | 511 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1205, 1327 |
| BsmAI | GTCTC | 5 cut(s) | 369, 461, 742, 1243, 1297 |
| BsmBI | CGTCTC | 1 cut(s) | 369 |
| BsmFI | GGGAC | 1 cut(s) | 511 |
| BsnI | GGCC | 1 cut(s) | 353 |
| Bso31I | GGTCTC | 2 cut(s) | 461, 1243 |
| Bsp119I | TTCGAA | 2 cut(s) | 233, 438 |
| Bsp1286I | GDGCHC | 2 cut(s) | 402, 1111 |
| Bsp143I | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| Bsp19I | CCATGG | 1 cut(s) | 47 |
| BspACI | CCGC | 3 cut(s) | 427, 724, 1031 |
| BspANI | GGCC | 1 cut(s) | 353 |
| BspCNI | CTCAG | 5 cut(s) | 340, 420, 547, 1012, 1027 |
| BspHI | TCATGA | 2 cut(s) | 373, 463 |
| BspLI | GGNNCC | 2 cut(s) | 722, 1350 |
| BspPI | GGATC | 2 cut(s) | 367, 1338 |
| BspT104I | TTCGAA | 2 cut(s) | 233, 438 |
| BspT107I | GGYRCC | 2 cut(s) | 720, 1348 |
| BspTNI | GGTCTC | 2 cut(s) | 461, 1243 |
| BsrDI | GCAATG | 2 cut(s) | 940, 1224 |
| BsrFI | RCCGGY | 2 cut(s) | 672, 1234 |
| BsrI | ACTGG | 4 cut(s) | 125, 175, 1002, 1256 |
| BssAI | RCCGGY | 2 cut(s) | 672, 1234 |
| BssECI | CCNNGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| BssMI | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| BssNI | GRCGYC | 2 cut(s) | 721, 1349 |
| BssSI | CACGAG | 1 cut(s) | 871 |
| BssT1I | CCWWGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| Bst2BI | CACGAG | 1 cut(s) | 871 |
| Bst2UI | CCWGG | 3 cut(s) | 940, 972, 1082 |
| Bst4CI | ACNGT | 2 cut(s) | 777, 1307 |
| Bst6I | CTCTTC | 3 cut(s) | 478, 1122, 1246 |
| BstACI | GRCGYC | 2 cut(s) | 721, 1349 |
| BstBI | TTCGAA | 2 cut(s) | 233, 438 |
| BstC8I | GCNNGC | 7 cut(s) | 388, 398, 683, 695, 728, 846, 1215 |
| BstDEI | CTNAG | 6 cut(s) | 99, 348, 407, 534, 1020, 1035 |
| BstDSI | CCRYGG | 1 cut(s) | 47 |
| BstF5I | GGATG | 6 cut(s) | 435, 871, 1090, 1215, 1264, 1268 |
| BstH2I | RGCGCY | 2 cut(s) | 724, 1352 |
| BstHHI | GCGC | 2 cut(s) | 723, 1351 |
| BstKTI | GATC | 4 cut(s) | 362, 583, 709, 1333 |
| BstMAI | GTCTC | 5 cut(s) | 369, 461, 742, 1243, 1297 |
| BstMBI | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| BstMCI | CGRYCG | 1 cut(s) | 261 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 424, 539, 678, 727, 1261 |
| BstNI | CCWGG | 3 cut(s) | 940, 972, 1082 |
| BstNSI | RCATGY | 3 cut(s) | 848, 1217, 1292 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 822 |
| BstSCI | CCNGG | 3 cut(s) | 938, 970, 1080 |
| BstV1I | GCAGC | 2 cut(s) | 557, 955 |
| BstV2I | GAAGAC | 3 cut(s) | 288, 447, 759 |
| BstX2I | RGATCY | 1 cut(s) | 1330 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 120 |
| BstYI | RGATCY | 1 cut(s) | 1330 |
| BsuRI | GGCC | 1 cut(s) | 353 |
| BtgI | CCRYGG | 1 cut(s) | 47 |
| BtgZI | GCGATG | 1 cut(s) | 590 |
| BtsCI | GGATG | 6 cut(s) | 435, 871, 1090, 1215, 1264, 1268 |
| BtsI | GCAGTG | 3 cut(s) | 553, 692, 1026 |
| BtsIMutI | CAGTG | 4 cut(s) | 553, 692, 773, 1026 |
| Cac8I | GCNNGC | 7 cut(s) | 388, 398, 683, 695, 728, 846, 1215 |
| CaiI | CAGNNNCTG | 1 cut(s) | 245 |
| CciI | TCATGA | 2 cut(s) | 373, 463 |
| CfoI | GCGC | 2 cut(s) | 723, 1351 |
| Cfr10I | RCCGGY | 2 cut(s) | 672, 1234 |
| Cfr13I | GGNCC | 2 cut(s) | 352, 824 |
| Csp6I | GTAC | 2 cut(s) | 433, 1249 |
| CviAII | CATG | 9 cut(s) | 48, 70, 374, 464, 845, 861, 985, 1214, 1289 |
| CviQI | GTAC | 2 cut(s) | 433, 1249 |
| DdeI | CTNAG | 6 cut(s) | 99, 348, 407, 534, 1020, 1035 |
| DinI | GGCGCC | 2 cut(s) | 722, 1350 |
| DpnI | GATC | 4 cut(s) | 361, 582, 708, 1332 |
| DpnII | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| Eam1104I | CTCTTC | 3 cut(s) | 478, 1122, 1246 |
| EarI | CTCTTC | 3 cut(s) | 478, 1122, 1246 |
| Eco130I | CCWWGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| Eco24I | GRGCYC | 1 cut(s) | 402 |
| Eco31I | GGTCTC | 2 cut(s) | 461, 1243 |
| Eco47I | GGWCC | 1 cut(s) | 824 |
| Eco57I | CTGAAG | 4 cut(s) | 321, 363, 1077, 1227 |
| EcoO109I | RGGNCCY | 1 cut(s) | 352 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 3 cut(s) | 938, 970, 1080 |
| EcoT14I | CCWWGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| EcoT22I | ATGCAT | 1 cut(s) | 1215 |
| EcoT38I | GRGCYC | 1 cut(s) | 402 |
| EgeI | GGCGCC | 2 cut(s) | 722, 1350 |
| EheI | GGCGCC | 2 cut(s) | 722, 1350 |
| ErhI | CCWWGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| Esp3I | CGTCTC | 1 cut(s) | 369 |
| FaeI | CATG | 9 cut(s) | 51, 73, 377, 467, 848, 864, 988, 1217, 1292 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 305, 337 |
| FaqI | GGGAC | 1 cut(s) | 511 |
| FatI | CATG | 9 cut(s) | 47, 69, 373, 463, 844, 860, 984, 1213, 1288 |
| FauNDI | CATATG | 1 cut(s) | 829 |
| FbaI | TGATCA | 1 cut(s) | 706 |
| Fnu4HI | GCNGC | 4 cut(s) | 571, 724, 944, 1032 |
| FokI | GGATG | 6 cut(s) | 442, 878, 1097, 1222, 1251, 1255 |
| FriOI | GRGCYC | 1 cut(s) | 402 |
| Fsp4HI | GCNGC | 4 cut(s) | 571, 724, 944, 1032 |
| GlaI | GCGC | 2 cut(s) | 722, 1350 |
| GluI | GCNGC | 4 cut(s) | 571, 724, 944, 1032 |
| GsaI | CCCAGC | 1 cut(s) | 758 |
| GsuI | CTGGAG | 1 cut(s) | 954 |
| HaeII | RGCGCY | 2 cut(s) | 724, 1352 |
| HaeIII | GGCC | 1 cut(s) | 353 |
| HapII | CCGG | 3 cut(s) | 198, 673, 1235 |
| HhaI | GCGC | 2 cut(s) | 723, 1351 |
| Hin1I | GRCGYC | 2 cut(s) | 721, 1349 |
| Hin1II | CATG | 9 cut(s) | 51, 73, 377, 467, 848, 864, 988, 1217, 1292 |
| Hin6I | GCGC | 2 cut(s) | 721, 1349 |
| HinP1I | GCGC | 2 cut(s) | 721, 1349 |
| HincII | GTYRAC | 1 cut(s) | 1125 |
| HindII | GTYRAC | 1 cut(s) | 1125 |
| HindIII | AAGCTT | 1 cut(s) | 416 |
| HinfI | GANTC | 7 cut(s) | 155, 293, 335, 998, 1061, 1148, 1222 |
| HpaII | CCGG | 3 cut(s) | 198, 673, 1235 |
| HphI | GGTGA | 4 cut(s) | 36, 188, 1005, 1361 |
| Hpy166II | GTNNAC | 2 cut(s) | 835, 1125 |
| Hpy188I | TCNGA | 8 cut(s) | 154, 205, 301, 537, 645, 706, 1021, 1246 |
| Hpy188III | TCNNGA | 5 cut(s) | 374, 464, 578, 995, 1328 |
| Hpy8I | GTNNAC | 2 cut(s) | 835, 1125 |
| HpyAV | CCTTC | 5 cut(s) | 51, 296, 560, 640, 1084 |
| HpyCH4III | ACNGT | 2 cut(s) | 777, 1307 |
| HpyCH4IV | ACGT | 1 cut(s) | 444 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 424, 539, 678, 727, 1261 |
| HpyF3I | CTNAG | 6 cut(s) | 99, 348, 407, 534, 1020, 1035 |
| HpySE526I | ACGT | 1 cut(s) | 444 |
| Hsp92I | GRCGYC | 2 cut(s) | 721, 1349 |
| Hsp92II | CATG | 9 cut(s) | 51, 73, 377, 467, 848, 864, 988, 1217, 1292 |
| HspAI | GCGC | 2 cut(s) | 721, 1349 |
| KasI | GGCGCC | 2 cut(s) | 720, 1348 |
| Ksp22I | TGATCA | 1 cut(s) | 706 |
| Kzo9I | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| Lsp1109I | GCAGC | 2 cut(s) | 557, 955 |
| LweI | GCATC | 4 cut(s) | 557, 1075, 1200, 1273 |
| MaeII | ACGT | 1 cut(s) | 444 |
| MaeIII | GTNAC | 2 cut(s) | 85, 1011 |
| MalI | GATC | 4 cut(s) | 361, 582, 708, 1332 |
| MboI | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| MboII | GAAGA | 9 cut(s) | 246, 288, 452, 465, 759, 1070, 1109, 1233, 1325 |
| MflI | RGATCY | 1 cut(s) | 1330 |
| MhlI | GDGCHC | 2 cut(s) | 402, 1111 |
| MluCI | AATT | 7 cut(s) | 4, 104, 250, 280, 853, 949, 1379 |
| Mly113I | GGCGCC | 2 cut(s) | 721, 1349 |
| MlyI | GAGTC | 3 cut(s) | 302, 1157, 1216 |
| MmeI | TCCRAC | 1 cut(s) | 392 |
| Mph1103I | ATGCAT | 1 cut(s) | 1215 |
| MroXI | GAANNNNTTC | 1 cut(s) | 65 |
| MseI | TTAA | 2 cut(s) | 857, 1387 |
| MslI | CAYNNNNRTG | 2 cut(s) | 226, 1308 |
| MspA1I | CMGCKG | 1 cut(s) | 341 |
| MspI | CCGG | 3 cut(s) | 198, 673, 1235 |
| MspR9I | CCNGG | 3 cut(s) | 940, 972, 1082 |
| MvaI | CCWGG | 3 cut(s) | 940, 972, 1082 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 424, 539, 678, 727, 1261 |
| NarI | GGCGCC | 2 cut(s) | 721, 1349 |
| NcoI | CCATGG | 1 cut(s) | 47 |
| NdeI | CATATG | 1 cut(s) | 829 |
| NdeII | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| NlaIII | CATG | 9 cut(s) | 51, 73, 377, 467, 848, 864, 988, 1217, 1292 |
| NlaIV | GGNNCC | 2 cut(s) | 722, 1350 |
| NmuCI | GTSAC | 1 cut(s) | 1011 |
| NsiI | ATGCAT | 1 cut(s) | 1215 |
| NspI | RCATGY | 3 cut(s) | 848, 1217, 1292 |
| NspV | TTCGAA | 2 cut(s) | 233, 438 |
| PaeI | GCATGC | 2 cut(s) | 848, 1217 |
| PagI | TCATGA | 2 cut(s) | 373, 463 |
| PciI | ACATGT | 1 cut(s) | 1288 |
| PdmI | GAANNNNTTC | 1 cut(s) | 65 |
| PfeI | GAWTC | 4 cut(s) | 155, 335, 998, 1061 |
| PkrI | GCNGC | 4 cut(s) | 572, 725, 945, 1033 |
| PleI | GAGTC | 3 cut(s) | 301, 1156, 1216 |
| PluTI | GGCGCC | 2 cut(s) | 724, 1352 |
| PpsI | GAGTC | 3 cut(s) | 301, 1156, 1216 |
| PscI | ACATGT | 1 cut(s) | 1288 |
| PshAI | GACNNNNGTC | 1 cut(s) | 822 |
| Psp6I | CCWGG | 3 cut(s) | 938, 970, 1080 |
| PspFI | CCCAGC | 1 cut(s) | 754 |
| PspGI | CCWGG | 3 cut(s) | 938, 970, 1080 |
| PspN4I | GGNNCC | 2 cut(s) | 722, 1350 |
| PspPI | GGNCC | 2 cut(s) | 352, 824 |
| PstNI | CAGNNNCTG | 1 cut(s) | 245 |
| PsuI | RGATCY | 1 cut(s) | 1330 |
| PvuII | CAGCTG | 1 cut(s) | 341 |
| RsaI | GTAC | 2 cut(s) | 434, 1250 |
| RsaNI | GTAC | 2 cut(s) | 433, 1249 |
| RseI | CAYNNNNRTG | 2 cut(s) | 226, 1308 |
| SaqAI | TTAA | 2 cut(s) | 857, 1387 |
| SatI | GCNGC | 4 cut(s) | 571, 724, 944, 1032 |
| Sau3AI | GATC | 4 cut(s) | 359, 580, 706, 1330 |
| Sau96I | GGNCC | 2 cut(s) | 352, 824 |
| ScaI | AGTACT | 1 cut(s) | 1250 |
| SchI | GAGTC | 3 cut(s) | 302, 1157, 1216 |
| ScrFI | CCNGG | 3 cut(s) | 940, 972, 1082 |
| SduI | GDGCHC | 2 cut(s) | 402, 1111 |
| SfaNI | GCATC | 4 cut(s) | 557, 1075, 1200, 1273 |
| SfoI | GGCGCC | 2 cut(s) | 722, 1350 |
| SfuI | TTCGAA | 2 cut(s) | 233, 438 |
| SinI | GGWCC | 1 cut(s) | 824 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 226, 1308 |
| SmlI | CTYRAG | 2 cut(s) | 881, 1224 |
| SmoI | CTYRAG | 2 cut(s) | 881, 1224 |
| SphI | GCATGC | 2 cut(s) | 848, 1217 |
| Sse9I | AATT | 7 cut(s) | 4, 104, 250, 280, 853, 949, 1379 |
| SsiI | CCGC | 3 cut(s) | 427, 724, 1031 |
| SspDI | GGCGCC | 2 cut(s) | 720, 1348 |
| StyD4I | CCNGG | 3 cut(s) | 938, 970, 1080 |
| StyI | CCWWGG | 5 cut(s) | 47, 355, 820, 1048, 1133 |
| TaaI | ACNGT | 2 cut(s) | 777, 1307 |
| TaiI | ACGT | 1 cut(s) | 447 |
| TaqI | TCGA | 6 cut(s) | 167, 233, 438, 977, 1151, 1275 |
| TaqII | GACCGA | 1 cut(s) | 247 |
| TasI | AATT | 7 cut(s) | 4, 104, 250, 280, 853, 949, 1379 |
| TatI | WGTACW | 2 cut(s) | 432, 1248 |
| TauI | GCSGC | 2 cut(s) | 726, 1034 |
| TfiI | GAWTC | 4 cut(s) | 155, 335, 998, 1061 |
| Tru1I | TTAA | 2 cut(s) | 857, 1387 |
| Tru9I | TTAA | 2 cut(s) | 857, 1387 |
| TscAI | CASTG | 4 cut(s) | 560, 692, 780, 1033 |
| TseFI | GTSAC | 1 cut(s) | 1011 |
| TseI | GCWGC | 2 cut(s) | 570, 943 |
| Tsp45I | GTSAC | 1 cut(s) | 1011 |
| TspRI | CASTG | 4 cut(s) | 560, 692, 780, 1033 |
| VpaK11BI | GGWCC | 1 cut(s) | 824 |
| XapI | RAATTY | 3 cut(s) | 4, 853, 949 |
| XceI | RCATGY | 3 cut(s) | 848, 1217, 1292 |
| XmnI | GAANNNNTTC | 1 cut(s) | 65 |
| ZrmI | AGTACT | 1 cut(s) | 1250 |
| Zsp2I | ATGCAT | 1 cut(s) | 1215 |