Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004097

Physical Location & Seq

Genomic Coordinates Forward (+)

40918905 .. 40922132

Gene Structure 3228 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0240600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGCAGCGTCTGAAACTTCCACTACGGTTTCCCAAATCCATTTCCTATGGTTACAGAGCCTTCCACGATAAGACGCAGCTGGAGAATGTCGGGCCGCTGGCTTCAATCCTCAATTCCCGGGCAGTGGTTCGGTTCCGAGGTCCAGATACAGTTAAGTTCCTTCAGGGGCTGTTGACGAATGATGTAAGGAGGTTCGGTGAACCCTTGAGTGAGAAGACCTCAACATTGGTCACACCCAATTTATCCTCCGAGTCCATACCACCTATGTATGCCGCGCTATTAACGCCTCAGGGAAGATTCTTATATGATTTTGTCTTGTATGGCCTGCCTAGGCCGGATGCCAAGCTTAATAGGGCTGGGTCGGGACCTGGGGCAGACCCAGATGAGCCGTTGGAGGTCTTTGCTGACGTAGATGCTTCAGTCTTGGACGAACTCTTGAGCACCTTAAAGAAATACCGTTTGAGGGCTAAGGTGGACATTGAGAATGTGGCAGACGAGTTACATTGCTGGCAGCGTTATGGGGGAAAGCTATCTGAGAAGGACTCCTCTGTAGAAGAACCAGAAGCTGCTAGTGTTGGCTGGGGTGCTGGTGTTGATCGCTTAGGCATGTCAACTTCACGTGGAGAGCCTTGTGGATGGCAGTGGTTTAAGGATCCGAGATTGGATTGCCTTGGTTTCAGGGGGATCTTCCCGTCTAATACAACACCACCTTTGGTTGAAGCTGACAAAGAAACAGATGAACAAAACTACCTTCTATGGAGAATAGAAAATGGTGTTGCAGAAGGATCAACCGAGATCCCTAAAGGTGAGGCAATTCCTCTAGAATATAACCTGGTGGCTCTAAATGCAATTAGCTTTGACAAAGGGTGTTATGTGGGCCAAGAGCTTGTTGCTCGAACACACCACAGAGGGGTCATTCGCAAACGCCTGCTTCCTCTAAAATTTCTCAAGGATAGCGGAGAAGAAGCAGAGCAGAAGGTTGCCCCTGGCTCCGAGGTGATTGATAGTGTTTCTGACAAGAAAATTGGTACTGTCACAACTCAACTTGGATGTCGTGGACTTGGTGTCTTGCGTTTGGATGAAGCTTTTAAAGGATCAAGTACGCTAACCATACGAAGCCAGGACGATGTGAAGGTCGAGCCTATTAGACCCGATTGGTGGCCGCCTGAATGGTTGCAAGGACATCAGCGTCGAAGTGCAGCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009965 GO:0010016 GO:0010358 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048366 GO:0048367 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048532 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

402

Amino Acids

44.65

Weight (kDa)

5.91

Isoelectric Point (pI)

31.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-barrel_CAF17_C	PF25455	307 - 388	3.5e-19	CAF17, C-terminal beta-barrel domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43270 AT5G43270 AT5G43270
fragaria_vesca	FvH4_4g23650 FvH4_4g23650 FvH4_4g23650 FvH4_4g23650 FvH4_4g23650
malus_domestica	MD13G1120300.v1.1 MD16G1120300.v1.1
prunus_persica	Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1 Prupe.1G224900_v2.0.a1
pyrus_communis	pycom13g10470 pycom16g10280
rosa_chinensis	RchiOBHm_Chr4g0430121
rosa_laevigata	RLG00000007002
rosa_multiflora	Rmu_co8521931.1_g000002 Rmu_ssc0000150.1_g000023
rosa_roxburghii	Rroxscaffold_5G00371930
rosa_rugosa	Rorug04G0240300 Rorug04G0240400 Rorug04G0240400 Rorug04G0240500 Rorug04G0240600
rosa_samantha	Rh4AG297400 Rh4BG303800 Rh4CG319400 Rh4DG301300
rosa_wichuraiana	Rw4G025790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1188
AccII	CGCG	1 cut(s)	275
AciI	CCGC	4 cut(s)	95, 273, 957, 1163
AclWI	GGATC	6 cut(s)	647, 660, 692, 790, 793, 1102
AcoI	YGGCCR	1 cut(s)	1160
AcsI	RAATTY	1 cut(s)	941
AcuI	CTGAAG	2 cut(s)	146, 402
AcvI	CACGTG	1 cut(s)	620
AfaI	GTAC	2 cut(s)	1030, 1102
AfiI	CCNNNNNNNGG	4 cut(s)	124, 463, 910, 1158
AgsI	TTSAA	2 cut(s)	105, 719
AhdI	GACNNNNNGTC	1 cut(s)	1064
AjnI	CCWGG	4 cut(s)	367, 831, 985, 1119
AluBI	AGCT	9 cut(s)	79, 346, 529, 566, 722, 855, 886, 1085, 1202
AluI	AGCT	9 cut(s)	79, 346, 529, 566, 722, 855, 886, 1085, 1202
Alw21I	GWGCWC	1 cut(s)	443
AlwI	GGATC	6 cut(s)	647, 660, 692, 790, 793, 1102
AlwNI	CAGNNNCTG	3 cut(s)	10, 169, 566
Ama87I	CYCGRG	1 cut(s)	117
AoxI	GGCC	5 cut(s)	92, 322, 332, 877, 1160
ApeKI	GCWGC	6 cut(s)	4, 76, 511, 566, 1199, 1202
ApoI	RAATTY	1 cut(s)	941
AspA2I	CCTAGG	1 cut(s)	329
AspLEI	GCGC	1 cut(s)	277
AspS9I	GGNCC	4 cut(s)	92, 140, 365, 877
AsuC2I	CCSGG	2 cut(s)	118, 119
AsuHPI	GGTGA	3 cut(s)	209, 818, 1009
AvaI	CYCGRG	1 cut(s)	117
AvaII	GGWCC	2 cut(s)	140, 365
AvrII	CCTAGG	1 cut(s)	329
AxyI	CCTNAGG	1 cut(s)	288
BamHI	GGATCC	1 cut(s)	652
BbrPI	CACGTG	1 cut(s)	620
BbsI	GAAGAC	1 cut(s)	221
Bbv12I	GWGCWC	1 cut(s)	443
BbvI	GCAGC	5 cut(s)	16, 88, 523, 553, 1189
BccI	CCATC	1 cut(s)	630
BceAI	ACGGC	1 cut(s)	373
BciT130I	CCWGG	4 cut(s)	369, 833, 987, 1121
BcnI	CCSGG	2 cut(s)	118, 119
BfaI	CTAG	3 cut(s)	330, 570, 821
BfmI	CTRYAG	1 cut(s)	549
BisI	GCNGC	9 cut(s)	5, 77, 95, 273, 512, 567, 1163, 1200, 1203
BlnI	CCTAGG	1 cut(s)	329
BlsI	GCNGC	9 cut(s)	6, 78, 96, 274, 513, 568, 1164, 1201, 1204
Bme1390I	CCNGG	6 cut(s)	118, 119, 369, 833, 987, 1121
Bme18I	GGWCC	2 cut(s)	140, 365
BmeRI	GACNNNNNGTC	1 cut(s)	1064
BmeT110I	CYCGRG	1 cut(s)	117
BmgT120I	GGNCC	4 cut(s)	92, 140, 365, 877
BmiI	GGNNCC	4 cut(s)	134, 366, 654, 991
BmrFI	CCNGG	6 cut(s)	118, 119, 369, 833, 987, 1121
BmsI	GCATC	2 cut(s)	328, 403
BpiI	GAAGAC	1 cut(s)	221
BplI	GAGNNNNNCTC	4 cut(s)	203, 235, 527, 559
BpmI	CTGGAG	1 cut(s)	101
Bpu10I	CCTNAGC	2 cut(s)	468, 601
BpuEI	CTTGAG	3 cut(s)	226, 457, 932
BpuMI	CCSGG	2 cut(s)	118, 119
BsaAI	YACGTR	1 cut(s)	620
BsaJI	CCNNGG	7 cut(s)	117, 136, 329, 368, 670, 985, 993
BsaXI	ACNNNNNCTCC	2 cut(s)	181, 211
Bsc4I	CCNNNNNNNGG	4 cut(s)	124, 463, 910, 1158
Bse21I	CCTNAGG	1 cut(s)	288
Bse3DI	GCAATG	1 cut(s)	502
BseBI	CCWGG	4 cut(s)	369, 833, 987, 1121
BseDI	CCNNGG	7 cut(s)	117, 136, 329, 368, 670, 985, 993
BseGI	GGATG	4 cut(s)	343, 641, 1055, 1084
BseLI	CCNNNNNNNGG	4 cut(s)	124, 463, 910, 1158
BseMI	GCAATG	1 cut(s)	502
BseMII	CTCAG	2 cut(s)	302, 525
BseRI	GAGGAG	1 cut(s)	535
BseXI	GCAGC	5 cut(s)	16, 88, 523, 553, 1189
BseYI	CCCAGC	2 cut(s)	356, 579
Bsh1236I	CGCG	1 cut(s)	275
BshFI	GGCC	5 cut(s)	94, 324, 334, 879, 1162
BsiHKAI	GWGCWC	1 cut(s)	443
BsiHKCI	CYCGRG	1 cut(s)	117
BsiSI	CCGG	2 cut(s)	118, 335
BslFI	GGGAC	1 cut(s)	378
BslI	CCNNNNNNNGG	4 cut(s)	124, 463, 910, 1158
BsmFI	GGGAC	1 cut(s)	378
BsnI	GGCC	5 cut(s)	94, 324, 334, 879, 1162
BsoBI	CYCGRG	1 cut(s)	117
Bsp1286I	GDGCHC	1 cut(s)	443
Bsp143I	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
BspACI	CCGC	4 cut(s)	95, 273, 957, 1163
BspANI	GGCC	5 cut(s)	94, 324, 334, 879, 1162
BspCNI	CTCAG	2 cut(s)	301, 526
BspFNI	CGCG	1 cut(s)	275
BspLI	GGNNCC	4 cut(s)	134, 366, 654, 991
BspPI	GGATC	6 cut(s)	647, 660, 692, 790, 793, 1102
BsrDI	GCAATG	1 cut(s)	502
BssECI	CCNNGG	7 cut(s)	117, 136, 329, 368, 670, 985, 993
BssMI	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
BssT1I	CCWWGG	2 cut(s)	329, 670
Bst2UI	CCWGG	4 cut(s)	369, 833, 987, 1121
Bst4CI	ACNGT	4 cut(s)	27, 151, 458, 1033
BstBAI	YACGTR	1 cut(s)	620
BstC8I	GCNNGC	4 cut(s)	99, 326, 509, 929
BstDEI	CTNAG	4 cut(s)	288, 468, 534, 601
BstF5I	GGATG	4 cut(s)	343, 641, 1055, 1084
BstFNI	CGCG	1 cut(s)	275
BstHHI	GCGC	1 cut(s)	277
BstKTI	GATC	6 cut(s)	598, 655, 687, 788, 798, 1097
BstMBI	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
BstMWI	GCNNNNNNNGC	2 cut(s)	283, 845
BstNI	CCWGG	4 cut(s)	369, 833, 987, 1121
BstNSI	RCATGY	1 cut(s)	610
BstSCI	CCNGG	6 cut(s)	116, 117, 367, 831, 985, 1119
BstSFI	CTRYAG	1 cut(s)	549
BstUI	CGCG	1 cut(s)	275
BstV1I	GCAGC	5 cut(s)	16, 88, 523, 553, 1189
BstV2I	GAAGAC	1 cut(s)	221
BstX2I	RGATCY	3 cut(s)	652, 684, 795
BstYI	RGATCY	3 cut(s)	652, 684, 795
Bsu36I	CCTNAGG	1 cut(s)	288
BsuRI	GGCC	5 cut(s)	94, 324, 334, 879, 1162
BtsCI	GGATG	4 cut(s)	343, 641, 1055, 1084
BtsI	GCAGTG	2 cut(s)	129, 647
BtsIMutI	CAGTG	2 cut(s)	129, 647
Cac8I	GCNNGC	4 cut(s)	99, 326, 509, 929
CaiI	CAGNNNCTG	3 cut(s)	10, 169, 566
CfoI	GCGC	1 cut(s)	277
Cfr13I	GGNCC	4 cut(s)	92, 140, 365, 877
Cfr9I	CCCGGG	1 cut(s)	117
CseI	GACGC	2 cut(s)	82, 1178
CsiI	ACCWGGT	1 cut(s)	831
Csp6I	GTAC	2 cut(s)	1029, 1101
CviAII	CATG	1 cut(s)	607
CviQI	GTAC	2 cut(s)	1029, 1101
DdeI	CTNAG	4 cut(s)	288, 468, 534, 601
DpnI	GATC	6 cut(s)	597, 654, 686, 787, 797, 1096
DpnII	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
DraI	TTTAAA	1 cut(s)	1090
DrdI	GACNNNNNNGTC	1 cut(s)	1188
DriI	GACNNNNNGTC	1 cut(s)	1064
DseDI	GACNNNNNNGTC	1 cut(s)	1188
EaeI	YGGCCR	1 cut(s)	1160
Eam1105I	GACNNNNNGTC	1 cut(s)	1064
Eco130I	CCWWGG	2 cut(s)	329, 670
Eco47I	GGWCC	2 cut(s)	140, 365
Eco57I	CTGAAG	2 cut(s)	146, 402
Eco72I	CACGTG	1 cut(s)	620
Eco81I	CCTNAGG	1 cut(s)	288
Eco88I	CYCGRG	1 cut(s)	117
EcoO109I	RGGNCCY	1 cut(s)	365
EcoRII	CCWGG	4 cut(s)	367, 831, 985, 1119
EcoT14I	CCWWGG	2 cut(s)	329, 670
ErhI	CCWWGG	2 cut(s)	329, 670
FaeI	CATG	1 cut(s)	610
FaqI	GGGAC	1 cut(s)	378
FatI	CATG	1 cut(s)	606
Fnu4HI	GCNGC	9 cut(s)	5, 77, 95, 273, 512, 567, 1163, 1200, 1203
FokI	GGATG	4 cut(s)	350, 648, 1062, 1091
Fsp4HI	GCNGC	9 cut(s)	5, 77, 95, 273, 512, 567, 1163, 1200, 1203
FspBI	CTAG	3 cut(s)	330, 570, 821
GlaI	GCGC	1 cut(s)	276
GluI	GCNGC	9 cut(s)	5, 77, 95, 273, 512, 567, 1163, 1200, 1203
GsaI	CCCAGC	2 cut(s)	360, 583
GsuI	CTGGAG	1 cut(s)	101
HaeIII	GGCC	5 cut(s)	94, 324, 334, 879, 1162
HapII	CCGG	2 cut(s)	118, 335
HgaI	GACGC	2 cut(s)	82, 1178
HhaI	GCGC	1 cut(s)	277
Hin1II	CATG	1 cut(s)	610
Hin6I	GCGC	1 cut(s)	275
HinP1I	GCGC	1 cut(s)	275
HincII	GTYRAC	2 cut(s)	174, 612
HindII	GTYRAC	2 cut(s)	174, 612
HindIII	AAGCTT	2 cut(s)	344, 1083
HinfI	GANTC	3 cut(s)	251, 297, 542
HpaII	CCGG	2 cut(s)	118, 335
HphI	GGTGA	3 cut(s)	209, 818, 1009
Hpy166II	GTNNAC	5 cut(s)	174, 200, 475, 612, 1058
Hpy188I	TCNGA	7 cut(s)	12, 137, 250, 535, 657, 994, 1015
Hpy188III	TCNNGA	4 cut(s)	143, 363, 436, 821
Hpy8I	GTNNAC	5 cut(s)	174, 200, 475, 612, 1058
Hpy99I	CGWCG	1 cut(s)	1194
HpyAV	CCTTC	7 cut(s)	70, 170, 532, 761, 776, 970, 1126
HpyCH4III	ACNGT	4 cut(s)	27, 151, 458, 1033
HpyCH4IV	ACGT	2 cut(s)	408, 619
HpyCH4V	TGCA	5 cut(s)	4, 779, 848, 1177, 1199
HpyF10VI	GCNNNNNNNGC	2 cut(s)	283, 845
HpyF3I	CTNAG	4 cut(s)	288, 468, 534, 601
HpySE526I	ACGT	2 cut(s)	408, 619
Hsp92II	CATG	1 cut(s)	610
HspAI	GCGC	1 cut(s)	275
Kzo9I	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
LmnI	GCTCC	1 cut(s)	995
Lsp1109I	GCAGC	5 cut(s)	16, 88, 523, 553, 1189
LweI	GCATC	2 cut(s)	328, 403
MabI	ACCWGGT	1 cut(s)	831
MaeI	CTAG	3 cut(s)	330, 570, 821
MaeII	ACGT	2 cut(s)	408, 619
MaeIII	GTNAC	4 cut(s)	50, 229, 498, 1033
MalI	GATC	6 cut(s)	597, 654, 686, 787, 797, 1096
MboI	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
MboII	GAAGA	5 cut(s)	226, 306, 566, 679, 974
MflI	RGATCY	3 cut(s)	652, 684, 795
MhlI	GDGCHC	1 cut(s)	443
MluCI	AATT	6 cut(s)	112, 238, 813, 849, 941, 1023
MlyI	GAGTC	2 cut(s)	260, 536
MmeI	TCCRAC	1 cut(s)	372
MseI	TTAA	7 cut(s)	153, 281, 348, 446, 648, 1089, 1207
MspA1I	CMGCKG	3 cut(s)	79, 97, 1202
MspI	CCGG	2 cut(s)	118, 335
MspR9I	CCNGG	6 cut(s)	118, 119, 369, 833, 987, 1121
MvaI	CCWGG	4 cut(s)	369, 833, 987, 1121
MvnI	CGCG	1 cut(s)	275
MwoI	GCNNNNNNNGC	2 cut(s)	283, 845
NciI	CCSGG	2 cut(s)	118, 119
NdeII	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
NlaIII	CATG	1 cut(s)	610
NlaIV	GGNNCC	4 cut(s)	134, 366, 654, 991
NmuCI	GTSAC	2 cut(s)	229, 1033
NspI	RCATGY	1 cut(s)	610
PfeI	GAWTC	1 cut(s)	297
PkrI	GCNGC	9 cut(s)	6, 78, 96, 274, 513, 568, 1164, 1201, 1204
PleI	GAGTC	2 cut(s)	259, 536
PmaCI	CACGTG	1 cut(s)	620
PmlI	CACGTG	1 cut(s)	620
PpsI	GAGTC	2 cut(s)	259, 536
Ppu21I	YACGTR	1 cut(s)	620
PpuMI	RGGWCCY	1 cut(s)	365
Psp5II	RGGWCCY	1 cut(s)	365
Psp6I	CCWGG	4 cut(s)	367, 831, 985, 1119
PspCI	CACGTG	1 cut(s)	620
PspFI	CCCAGC	2 cut(s)	356, 579
PspGI	CCWGG	4 cut(s)	367, 831, 985, 1119
PspN4I	GGNNCC	4 cut(s)	134, 366, 654, 991
PspPI	GGNCC	4 cut(s)	92, 140, 365, 877
PspPPI	RGGWCCY	1 cut(s)	365
PstNI	CAGNNNCTG	3 cut(s)	10, 169, 566
PsuI	RGATCY	3 cut(s)	652, 684, 795
PvuII	CAGCTG	2 cut(s)	79, 1202
RsaI	GTAC	2 cut(s)	1030, 1102
RsaNI	GTAC	2 cut(s)	1029, 1101
SaqAI	TTAA	7 cut(s)	153, 281, 348, 446, 648, 1089, 1207
SatI	GCNGC	9 cut(s)	5, 77, 95, 273, 512, 567, 1163, 1200, 1203
Sau3AI	GATC	6 cut(s)	595, 652, 684, 785, 795, 1094
Sau96I	GGNCC	4 cut(s)	92, 140, 365, 877
SchI	GAGTC	2 cut(s)	260, 536
ScrFI	CCNGG	6 cut(s)	118, 119, 369, 833, 987, 1121
SduI	GDGCHC	1 cut(s)	443
SexAI	ACCWGGT	1 cut(s)	831
SfaNI	GCATC	2 cut(s)	328, 403
SfcI	CTRYAG	1 cut(s)	549
SinI	GGWCC	2 cut(s)	140, 365
SmaI	CCCGGG	1 cut(s)	119
SmlI	CTYRAG	3 cut(s)	205, 436, 947
SmoI	CTYRAG	3 cut(s)	205, 436, 947
Sse9I	AATT	6 cut(s)	112, 238, 813, 849, 941, 1023
SsiI	CCGC	4 cut(s)	95, 273, 957, 1163
SspMI	CTAG	3 cut(s)	330, 570, 821
StyD4I	CCNGG	6 cut(s)	116, 117, 367, 831, 985, 1119
StyI	CCWWGG	2 cut(s)	329, 670
TaaI	ACNGT	4 cut(s)	27, 151, 458, 1033
TaiI	ACGT	2 cut(s)	411, 622
TaqI	TCGA	3 cut(s)	895, 1137, 1192
TasI	AATT	6 cut(s)	112, 238, 813, 849, 941, 1023
TauI	GCSGC	3 cut(s)	97, 275, 1165
TfiI	GAWTC	1 cut(s)	297
Tru1I	TTAA	7 cut(s)	153, 281, 348, 446, 648, 1089, 1207
Tru9I	TTAA	7 cut(s)	153, 281, 348, 446, 648, 1089, 1207
TscAI	CASTG	2 cut(s)	129, 647
TseFI	GTSAC	2 cut(s)	229, 1033
TseI	GCWGC	6 cut(s)	4, 76, 511, 566, 1199, 1202
Tsp45I	GTSAC	2 cut(s)	229, 1033
TspDTI	ATGAA	2 cut(s)	753, 1095
TspMI	CCCGGG	1 cut(s)	117
TspRI	CASTG	2 cut(s)	129, 647
VpaK11BI	GGWCC	2 cut(s)	140, 365
XapI	RAATTY	1 cut(s)	941
XbaI	TCTAGA	1 cut(s)	820
XceI	RCATGY	1 cut(s)	610
XmaI	CCCGGG	1 cut(s)	117
XmaJI	CCTAGG	1 cut(s)	329
XspI	CTAG	3 cut(s)	330, 570, 821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.