ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06145 |
| fragaria_vesca | FvH4_4g14500 |
| malus_domestica | MD13G1183200.v1.1 MD16G1184100.v1.1 |
| prunus_persica | Prupe.1G151500_v2.0.a1 |
| pyrus_communis | pycom13g15850 pycom16g15460 |
| rosa_chinensis | RchiOBHm_Chr4g0418331 |
| rosa_laevigata | RLG00000007875 |
| rosa_multiflora | Rmu_sc0011505.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00361520 |
| rosa_rugosa | Rorug04G0152200 |
| rosa_samantha | Rh4AG213800 Rh4BG216600 Rh4CG225400 Rh4DG212300 |
| rosa_wichuraiana | Rw4G018160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 9, 21, 27, 30 |
| AclWI | GGATC | 1 cut(s) | 195 |
| AlwI | GGATC | 1 cut(s) | 195 |
| AoxI | GGCC | 1 cut(s) | 227 |
| ApeKI | GCWGC | 4 cut(s) | 24, 36, 130, 201 |
| AspS9I | GGNCC | 1 cut(s) | 151 |
| AsuC2I | CCSGG | 1 cut(s) | 6 |
| AsuHPI | GGTGA | 1 cut(s) | 119 |
| AvaII | GGWCC | 1 cut(s) | 151 |
| AxyI | CCTNAGG | 1 cut(s) | 155 |
| BbvI | GCAGC | 4 cut(s) | 36, 48, 142, 188 |
| BccI | CCATC | 1 cut(s) | 115 |
| BcnI | CCSGG | 1 cut(s) | 6 |
| BisI | GCNGC | 6 cut(s) | 22, 25, 28, 37, 131, 202 |
| BlsI | GCNGC | 6 cut(s) | 23, 26, 29, 38, 132, 203 |
| Bme1390I | CCNGG | 1 cut(s) | 6 |
| Bme18I | GGWCC | 1 cut(s) | 151 |
| BmgT120I | GGNCC | 1 cut(s) | 151 |
| BmrFI | CCNGG | 1 cut(s) | 6 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BpuMI | CCSGG | 1 cut(s) | 6 |
| BsaJI | CCNNGG | 1 cut(s) | 224 |
| Bse1I | ACTGG | 1 cut(s) | 106 |
| Bse21I | CCTNAGG | 1 cut(s) | 155 |
| BseDI | CCNNGG | 1 cut(s) | 224 |
| BseGI | GGATG | 1 cut(s) | 126 |
| BseMII | CTCAG | 1 cut(s) | 169 |
| BseNI | ACTGG | 1 cut(s) | 106 |
| BseXI | GCAGC | 4 cut(s) | 36, 48, 142, 188 |
| BshFI | GGCC | 1 cut(s) | 229 |
| BsiSI | CCGG | 2 cut(s) | 6, 230 |
| BsnI | GGCC | 1 cut(s) | 229 |
| Bsp143I | GATC | 2 cut(s) | 171, 187 |
| BspACI | CCGC | 4 cut(s) | 9, 21, 27, 30 |
| BspANI | GGCC | 1 cut(s) | 229 |
| BspCNI | CTCAG | 1 cut(s) | 168 |
| BspHI | TCATGA | 1 cut(s) | 94 |
| BspPI | GGATC | 1 cut(s) | 195 |
| BsrI | ACTGG | 1 cut(s) | 106 |
| BssECI | CCNNGG | 1 cut(s) | 224 |
| BssMI | GATC | 2 cut(s) | 171, 187 |
| BstC8I | GCNNGC | 1 cut(s) | 50 |
| BstDEI | CTNAG | 1 cut(s) | 155 |
| BstF5I | GGATG | 1 cut(s) | 126 |
| BstKTI | GATC | 2 cut(s) | 174, 190 |
| BstMBI | GATC | 2 cut(s) | 171, 187 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 27, 33, 36, 45 |
| BstSCI | CCNGG | 1 cut(s) | 4 |
| BstV1I | GCAGC | 4 cut(s) | 36, 48, 142, 188 |
| Bsu36I | CCTNAGG | 1 cut(s) | 155 |
| BsuRI | GGCC | 1 cut(s) | 229 |
| BtsCI | GGATG | 1 cut(s) | 126 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 1 cut(s) | 50 |
| CciI | TCATGA | 1 cut(s) | 94 |
| Cfr13I | GGNCC | 1 cut(s) | 151 |
| CviAII | CATG | 2 cut(s) | 40, 95 |
| CviJI | RGCY | 3 cut(s) | 48, 201, 229 |
| CviKI_1 | RGCY | 3 cut(s) | 48, 201, 229 |
| DdeI | CTNAG | 1 cut(s) | 155 |
| DpnI | GATC | 2 cut(s) | 173, 189 |
| DpnII | GATC | 2 cut(s) | 171, 187 |
| EciI | GGCGGA | 1 cut(s) | 24 |
| Eco47I | GGWCC | 1 cut(s) | 151 |
| Eco81I | CCTNAGG | 1 cut(s) | 155 |
| EcoO109I | RGGNCCY | 1 cut(s) | 151 |
| FaeI | CATG | 2 cut(s) | 43, 98 |
| FaiI | YATR | 4 cut(s) | 41, 63, 96, 138 |
| FatI | CATG | 2 cut(s) | 39, 94 |
| Fnu4HI | GCNGC | 6 cut(s) | 22, 25, 28, 37, 131, 202 |
| FokI | GGATG | 1 cut(s) | 133 |
| Fsp4HI | GCNGC | 6 cut(s) | 22, 25, 28, 37, 131, 202 |
| GluI | GCNGC | 6 cut(s) | 22, 25, 28, 37, 131, 202 |
| HaeIII | GGCC | 1 cut(s) | 229 |
| HapII | CCGG | 2 cut(s) | 6, 230 |
| Hin1II | CATG | 2 cut(s) | 43, 98 |
| HinfI | GANTC | 1 cut(s) | 91 |
| HpaII | CCGG | 2 cut(s) | 6, 230 |
| HphI | GGTGA | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 2 cut(s) | 195, 216 |
| Hpy188III | TCNNGA | 3 cut(s) | 95, 146, 175 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 27, 33, 36, 45 |
| HpyF3I | CTNAG | 1 cut(s) | 155 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Hsp92II | CATG | 2 cut(s) | 43, 98 |
| Kzo9I | GATC | 2 cut(s) | 171, 187 |
| LpnPI | CCDG | 5 cut(s) | 19, 87, 142, 160, 169 |
| Lsp1109I | GCAGC | 4 cut(s) | 36, 48, 142, 188 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MalI | GATC | 2 cut(s) | 173, 189 |
| MboI | GATC | 2 cut(s) | 171, 187 |
| MboII | GAAGA | 1 cut(s) | 229 |
| MnlI | CCTC | 7 cut(s) | 7, 36, 111, 142, 164, 189, 219 |
| MspA1I | CMGCKG | 1 cut(s) | 27 |
| MspI | CCGG | 2 cut(s) | 6, 230 |
| MspR9I | CCNGG | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 27, 33, 36, 45 |
| NciI | CCSGG | 1 cut(s) | 6 |
| NdeII | GATC | 2 cut(s) | 171, 187 |
| NlaIII | CATG | 2 cut(s) | 43, 98 |
| PagI | TCATGA | 1 cut(s) | 94 |
| PfeI | GAWTC | 1 cut(s) | 91 |
| PkrI | GCNGC | 6 cut(s) | 23, 26, 29, 38, 132, 203 |
| PpuMI | RGGWCCY | 1 cut(s) | 151 |
| Psp5II | RGGWCCY | 1 cut(s) | 151 |
| PspPI | GGNCC | 1 cut(s) | 151 |
| PspPPI | RGGWCCY | 1 cut(s) | 151 |
| SatI | GCNGC | 6 cut(s) | 22, 25, 28, 37, 131, 202 |
| Sau3AI | GATC | 2 cut(s) | 171, 187 |
| Sau96I | GGNCC | 1 cut(s) | 151 |
| ScrFI | CCNGG | 1 cut(s) | 6 |
| SetI | ASST | 2 cut(s) | 87, 156 |
| SinI | GGWCC | 1 cut(s) | 151 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| SsiI | CCGC | 4 cut(s) | 9, 21, 27, 30 |
| StyD4I | CCNGG | 1 cut(s) | 4 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TauI | GCSGC | 2 cut(s) | 24, 30 |
| TfiI | GAWTC | 1 cut(s) | 91 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseI | GCWGC | 4 cut(s) | 24, 36, 130, 201 |
| TspDTI | ATGAA | 1 cut(s) | 83 |
| TspRI | CASTG | 1 cut(s) | 106 |
| VpaK11BI | GGWCC | 1 cut(s) | 151 |