Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0003796

Physical Location & Seq

Genomic Coordinates Reverse (-)

12374673 .. 12381257

Gene Structure 6585 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGGAAGTGGAGTATGATCGGGATGACTCTCCAATGAGGGAGCACCGGGATGAGGGGACAAATGATGATTTAGACGGGGCTGACAAATCAAGCAGGCACCGGAGCAAGGATAGGAAGAAGAGTAGCCGAGGGGAAGAGAAGGATGCCAGAAGTAAAGACCGAGAGCAGTCGAGGAGTGATGTTGTGAAGGAAAGAGAGAAAGAATCTAAAGATTTGGAAAAGGATCGAGTATATGGCAGGGAAAAGAGGAAGGATGATAGAGATGACCGGTATAAGGATAAGAGTAGAGATAATAAGGTGAAGGAGAAAGATTATGATCGAGAGAGTCATAGAGAAAAGGAGCATGATAGGGGGAAAGATAGAAAGGACAGAGGGAAGGAAAAAGAGCGGGAGAAGGAGAGAGAGGCAGAGAAGGATAGTGATCGAGGACGAGAGAAAGAGAGGGGGAATAGGGATAAGGACAGGGAAAGGGAAAAGGAAAGGGACCGGGCAAAAGAAAAGGAAAGAGAAAAAGAGAGAGAAAAACATAAAGATCGAGAGAAAGGGAGGGAAATCTATAAAGATACCGATAGGGAGAGGGTGAAAGACAAGTACAGGGAAAAAGAGAGGGAGGTGGATCAAGATAAGGATAAATCAAGAGACAGAGGAAGCAGGAGAAGCGTTGAAAGAGATGATAAGTTGAAGCTAAATGGTGATGATAACAGGGATAAAGACATTCTTAAGCAAGGGAAGGTTTCCCATAATGCTGAGGATGAACGGCATGCTGATGGCTTATCAAGTGGAACACATCTATCATCATCGGAGCTTGAGGAACGCATCTTGAAGACGAAGGAAGAGAGATTAAAGAAGAAAACAGAAGATGTTCCTGAGGTTTTAGCATGGGTTAGTAGGAGTCGTAAGATCGAGGAGAAAAGGAATGCAGAAAAGCAGAAAGCTTTCCAGCTTTCTAAGATTTTCGAGGAACAGGACAATATTGGTCAAGGAGAAAGTGAAGATGAGGAGACAGCCCAGGATCCCACTCATGATCGATCTCGTGTTAAAGTTCTTCATGGCCTTGACAAAGTAATGGAAGGTGGGGCAGTTGTTTTAACACTCAAAGATCAGAATATTCTAGCTGATGGTGACATTAATGAAGACATTGATATGCTTGAGAATGTGGAAATTGGAGAGCAGAAGCAGCGAGACGATGCTTACAAGGCAGCAAAGAAAAAAAGGGGGGTTTATGTCGATAAGTTTAATGACGACCCTGGCGCTGAGAAGAAAATGCTTCCACAGTATGATGATCCAACCCCAGATGAGGGGTTAACCTTAGATGAAAGAGGACGCTTTACTGGCGAAGCAGAGAAGAAACTTGAAGAGCTACGTAAGAGGATACAGGGTGTTCCCACAAAGGACCGCTTTGAAGATCTCAACATGTCTGGGAAGATCTCATCTGATTTCTATACTCAAGATGAAATGCTTCAGTTTAAAAAACCTAAGAAAAAGAAATCCTTGCGGAAGAGGGAGAAGCTAGACTTAGATGCCCTTGAAGCAGAAGCAGTATCTGCAGGGTTGGGTGTTGAAGACCTTGGTTCTAGGAATGATGCAAAGAGGCAGGCCAGTAAAGAGGAGCAAGAAAGATTGGAAGCTGAAAGGAGAAATAGTGCATACCAGCTGGCTTATGCTAGAGCTGACGAGGCATCTAAATCATTGCGACTGGAACAAACTCTTTCTGTTAAACGAGAGGAAAATGAAAATCCTGTCTTCGCAGATGATGACGATGATCTGTATAAATCCTTAGAGAAAGCAAGGAAATTGGCTCTTAAAAAGAAAGAGGAGGAAAAAACTGTATCTGGTCCACAAGCGATTGCTCTCCTTGCCACCACCACTGGCAGTAGTCAGACTGCAGATGATCAAATCCCCTCAACTGGAGAGTCACAGGATAACAAGGTTGTCTTCACTGAGATGGAAGAGTTTGTCTGGGGCCTCCAGCTTGATGAAGAATCCCACAAGCCTGAAAGTGAAGATGTTTTTATGCAAGAAGATGAACCCGAAGTTCCCCATGAAGAAAAAATGGATGAACCTGGTGGATGGACTGAAGTTAATGATATGGATGAAGACAAACAGCCTGATAATGAGGATAAGGAGGAGGTAGTTCCTGATGAAACAATTCATGAAGTTGCGGTCGGGAAGGGCTTATCAGGTGTACTGAAGCTGCTTAAAGATCGAGGAACCCTTAAAGAAGGTATTGACTGGGGTGGCAGAAACATGGACAAGAAAAAGAGCAAACTTTTTGGTATTGTAGATGATGATGAGGAGGAGCAGCCAAAGGAGACCCATACATCACGTCAAAAAAAGGATGAACCAAGGGATACTCGTTCATCCTCTTCCAGCCATCAAAAGGATACTCGTGCACCTAAAGTCTATCAGGAAAAGGATATTCGCATTGAGAGAACCGATGAATTTGGCAGAACTTTGACGCCCAAGGAAGCCTTTAGGATACTTTCTCATAAGTTCCATGGGAAGGGGCCTGGAAAGATGAAGCAAGAAAAGCGCATGAAGCAATACCAGGAAGAACTAAAGTTGAAGCAGATGAAGAGTTCAGATACACCATCACTGTCTGCGGAGAGGATGAGGGACACTCAAGCTCGCTTGCAGACACCATATCTTGTCCTCAGTGGCCATGTTAAACCAGGGCAAACTAGCGATCCCAGAAGTGGTTTTGCAACGGTTGAGAGGGATCTCCCCGGGGGCTTGACACCCATGCTTGGTGACAGAAAGGTTGAACATTTCCTAGGGATAAAGCGCAAAGCTGAGCCTGAAAAGCCGTGGAGAGAATTTTCGAGGGTGTTGTATTTGCCGTCCGAGGATTTCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000481 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008380 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009933 GO:0009965 GO:0009987 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010467 GO:0010588 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0022622 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048528 GO:0048532 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0061458 GO:0065003 GO:0070013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090567 GO:0090696 GO:0090698 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1901360 GO:1905392 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SART-1

Protein Analysis

953

Amino Acids

110.84

Weight (kDa)

5.6

Isoelectric Point (pI)

41.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SART-1	PF03343	288 - 852	3.6e-69	SART-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16780 AT5G16780 AT5G16780
fragaria_vesca	FvH4_4g15641 FvH4_4g15641 FvH4_4g15641 FvH4_4g15641
malus_domestica	MD13G1193700.v1.1 MD16G1194300.v1.1
prunus_persica	Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1
pyrus_communis	pycom13g16590 pycom16g16410
rosa_chinensis	RchiOBHm_Chr1g0362521 RchiOBHm_Chr4g0416151 RchiOBHm_Chr4g0416161
rosa_laevigata	RLG00000008010
rosa_multiflora	Rmu_co8134734.1_g000001 Rmu_sc0031164.1_g000005 Rmu_sc0034372.1_g000002 Rmu_sc0035291.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360010
rosa_rugosa	Rorug04G0139200 Rorug04G0139300 Rorug04G0139300
rosa_samantha	Rh4AG201400 Rh4BG198700 Rh4BG198900 Rh4CG212600 Rh4CG212700 Rh4CG214400 Rh4DG198800
rosa_wichuraiana	Rw4G017030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	96
AccBSI	CCGCTC	1 cut(s)	388
AciI	CCGC	5 cut(s)	388, 1396, 1495, 2162, 2603
AclWI	GGATC	7 cut(s)	231, 624, 1007, 1020, 1277, 2681, 2727
AcoI	YGGCCR	1 cut(s)	2659
AcsI	RAATTY	2 cut(s)	2441, 2816
AcuI	CTGAAG	3 cut(s)	1445, 2097, 2210
AcyI	GRCGYC	1 cut(s)	2459
AfaI	GTAC	2 cut(s)	593, 2187
AflII	CTTAAG	1 cut(s)	719
AflIII	ACRYGT	1 cut(s)	1413
AgeI	ACCGGT	1 cut(s)	267
AgsI	TTSAA	9 cut(s)	665, 682, 823, 1355, 1403, 1529, 1562, 2566, 2765
AjiI	CACGTC	1 cut(s)	2327
AjnI	CCWGG	6 cut(s)	1008, 1246, 2062, 2509, 2547, 2671
Alw21I	GWGCWC	2 cut(s)	45, 2395
Alw26I	GTCTC	4 cut(s)	633, 995, 1176, 2306
Alw44I	GTGCAC	1 cut(s)	2391
AlwI	GGATC	7 cut(s)	231, 624, 1007, 1020, 1277, 2681, 2727
AlwNI	CAGNNNCTG	1 cut(s)	1544
Ama87I	CYCGRG	1 cut(s)	2726
AoxI	GGCC	5 cut(s)	1051, 1596, 1963, 2507, 2659
ApaLI	GTGCAC	1 cut(s)	2391
ApeKI	GCWGC	4 cut(s)	1177, 1199, 2194, 2302
ApoI	RAATTY	2 cut(s)	2441, 2816
AseI	ATTAAT	1 cut(s)	1128
AsiGI	ACCGGT	1 cut(s)	267
Asp700I	GAANNNNTTC	4 cut(s)	861, 935, 1458, 2148
AspA2I	CCTAGG	1 cut(s)	2773
AspLEI	GCGC	3 cut(s)	1253, 2535, 2787
AspS9I	GGNCC	5 cut(s)	484, 1393, 1835, 1963, 2507
AsuC2I	CCSGG	4 cut(s)	47, 488, 2727, 2728
AsuHPI	GGTGA	5 cut(s)	310, 592, 704, 1133, 2762
AvaI	CYCGRG	1 cut(s)	2726
AvaII	GGWCC	3 cut(s)	484, 1393, 1835
AvrII	CCTAGG	1 cut(s)	2773
AxyI	CCTNAGG	1 cut(s)	867
BaeGI	GKGCMC	1 cut(s)	2395
BalI	TGGCCA	1 cut(s)	2661
BamHI	GGATCC	1 cut(s)	1012
BanI	GGYRCC	1 cut(s)	96
BauI	CACGAG	2 cut(s)	1032, 2388
BbsI	GAAGAC	6 cut(s)	830, 1140, 1569, 1735, 1927, 2103
Bbv12I	GWGCWC	2 cut(s)	45, 2395
BbvCI	CCTCAGC	1 cut(s)	747
BbvI	GCAGC	4 cut(s)	1189, 1211, 2181, 2314
BccI	CCATC	6 cut(s)	761, 1112, 1939, 2064, 2382, 2599
BceAI	ACGGC	3 cut(s)	773, 2791, 2824
BciT130I	CCWGG	6 cut(s)	1010, 1248, 2064, 2511, 2549, 2673
BciVI	GTATCC	4 cut(s)	1365, 2344, 2377, 2472
BclI	TGATCA	1 cut(s)	1891
BcnI	CCSGG	4 cut(s)	47, 488, 2727, 2728
BcoDI	GTCTC	4 cut(s)	633, 995, 1176, 2306
BfaI	CTAG	6 cut(s)	1112, 1511, 1575, 1665, 2682, 2774
BfmI	CTRYAG	2 cut(s)	1545, 1884
BfoI	RGCGCY	1 cut(s)	1254
BfrI	CTTAAG	1 cut(s)	719
BfuI	GTATCC	4 cut(s)	1365, 2344, 2377, 2472
BglII	AGATCT	2 cut(s)	1405, 1425
BisI	GCNGC	4 cut(s)	1178, 1200, 2195, 2303
BlnI	CCTAGG	1 cut(s)	2773
BlpI	GCTNAGC	1 cut(s)	2793
BlsI	GCNGC	4 cut(s)	1179, 1201, 2196, 2304
Bme18I	GGWCC	3 cut(s)	484, 1393, 1835
BmeT110I	CYCGRG	1 cut(s)	2726
BmgBI	CACGTC	1 cut(s)	2327
BmgT120I	GGNCC	5 cut(s)	484, 1393, 1835, 1963, 2507
BmiI	GGNNCC	6 cut(s)	98, 485, 1014, 1964, 2212, 2508
BmrI	ACTGGG	1 cut(s)	2242
BmsI	GCATC	6 cut(s)	133, 825, 1177, 1510, 1573, 1688
BmuI	ACTGGG	1 cut(s)	2242
BpiI	GAAGAC	6 cut(s)	830, 1140, 1569, 1735, 1927, 2103
BplI	GAGNNNNNCTC	2 cut(s)	2605, 2637
BpmI	CTGGAG	2 cut(s)	1929, 1952
Bpu10I	CCTNAGC	1 cut(s)	747
Bpu1102I	GCTNAGC	1 cut(s)	2793
BpuEI	CTTGAG	4 cut(s)	827, 1169, 1431, 2607
BpuMI	CCSGG	4 cut(s)	47, 488, 2727, 2728
Bsa29I	ATCGAT	1 cut(s)	1027
BsaAI	YACGTR	1 cut(s)	1364
BsaBI	GATNNNNATC	2 cut(s)	315, 420
BsaHI	GRCGYC	1 cut(s)	2459
BsaI	GGTCTC	1 cut(s)	2306
BsaWI	WCCGGW	2 cut(s)	99, 267
BsaXI	ACNNNNNCTCC	2 cut(s)	1627, 1657
Bse118I	RCCGGY	1 cut(s)	267
Bse1I	ACTGG	6 cut(s)	1336, 1599, 1701, 1873, 1912, 2237
Bse21I	CCTNAGG	1 cut(s)	867
Bse3DI	GCAATG	1 cut(s)	1688
Bse8I	GATNNNNATC	2 cut(s)	315, 420
BseBI	CCWGG	6 cut(s)	1010, 1248, 2064, 2511, 2549, 2673
BseCI	ATCGAT	1 cut(s)	1027
BseJI	GATNNNNATC	2 cut(s)	315, 420
BseMI	GCAATG	1 cut(s)	1688
BseMII	CTCAG	6 cut(s)	738, 858, 1245, 1932, 2668, 2784
BseNI	ACTGG	6 cut(s)	1336, 1599, 1701, 1873, 1912, 2237
BseRI	GAGGAG	8 cut(s)	187, 920, 1013, 1622, 1829, 2141, 2309, 2312
BseSI	GKGCMC	1 cut(s)	2395
BseXI	GCAGC	4 cut(s)	1189, 1211, 2181, 2314
Bsh1285I	CGRYCG	1 cut(s)	2166
BshFI	GGCC	5 cut(s)	1053, 1598, 1965, 2509, 2661
BshNI	GGYRCC	1 cut(s)	96
BshTI	ACCGGT	1 cut(s)	267
BshVI	ATCGAT	1 cut(s)	1027
BsiEI	CGRYCG	1 cut(s)	2166
BsiHKAI	GWGCWC	2 cut(s)	45, 2395
BsiHKCI	CYCGRG	1 cut(s)	2726
BsiSI	CCGG	5 cut(s)	46, 100, 268, 487, 2727
BslFI	GGGAC	3 cut(s)	70, 497, 2630
BsmAI	GTCTC	4 cut(s)	633, 995, 1176, 2306
BsmBI	CGTCTC	1 cut(s)	1176
BsmFI	GGGAC	3 cut(s)	70, 497, 2630
BsmI	GAATGC	1 cut(s)	922
BsnI	GGCC	5 cut(s)	1053, 1598, 1965, 2509, 2661
Bso31I	GGTCTC	1 cut(s)	2306
BsoBI	CYCGRG	1 cut(s)	2726
Bsp1286I	GDGCHC	2 cut(s)	45, 2395
Bsp1720I	GCTNAGC	1 cut(s)	2793
Bsp19I	CCATGG	1 cut(s)	2497
BspACI	CCGC	5 cut(s)	388, 1396, 1495, 2162, 2603
BspANI	GGCC	5 cut(s)	1053, 1598, 1965, 2509, 2661
BspCNI	CTCAG	6 cut(s)	739, 859, 1246, 1933, 2667, 2785
BspDI	ATCGAT	1 cut(s)	1027
BspHI	TCATGA	2 cut(s)	1021, 2152
BspLI	GGNNCC	6 cut(s)	98, 485, 1014, 1964, 2212, 2508
BspMAI	CTGCAG	2 cut(s)	1549, 1888
BspPI	GGATC	7 cut(s)	231, 624, 1007, 1020, 1277, 2681, 2727
BspQI	GCTCTTC	1 cut(s)	1350
BspT107I	GGYRCC	1 cut(s)	96
BspTI	CTTAAG	1 cut(s)	719
BspTNI	GGTCTC	1 cut(s)	2306
BsrBI	CCGCTC	1 cut(s)	388
BsrDI	GCAATG	1 cut(s)	1688
BsrFI	RCCGGY	1 cut(s)	267
BsrI	ACTGG	6 cut(s)	1336, 1599, 1701, 1873, 1912, 2237
BssAI	RCCGGY	1 cut(s)	267
BssNI	GRCGYC	1 cut(s)	2459
BssSI	CACGAG	2 cut(s)	1032, 2388
BssT1I	CCWWGG	5 cut(s)	1567, 2345, 2463, 2497, 2773
Bst2BI	CACGAG	2 cut(s)	1032, 2388
Bst2UI	CCWGG	6 cut(s)	1010, 1248, 2064, 2511, 2549, 2673
Bst4CI	ACNGT	4 cut(s)	1275, 1828, 2598, 2710
Bst6I	CTCTTC	8 cut(s)	113, 129, 828, 1350, 1493, 1944, 2371, 2570
BstACI	GRCGYC	1 cut(s)	2459
BstAFI	CTTAAG	1 cut(s)	719
BstAPI	GCANNNNNTGC	1 cut(s)	1544
BstBAI	YACGTR	1 cut(s)	1364
BstC8I	GCNNGC	6 cut(s)	95, 762, 1596, 1656, 2629, 2633
BstDSI	CCRYGG	2 cut(s)	2497, 2807
BstH2I	RGCGCY	1 cut(s)	1254
BstHHI	GCGC	3 cut(s)	1253, 2535, 2787
BstMAI	GTCTC	4 cut(s)	633, 995, 1176, 2306
BstMCI	CGRYCG	1 cut(s)	2166
BstNI	CCWGG	6 cut(s)	1010, 1248, 2064, 2511, 2549, 2673
BstNSI	RCATGY	2 cut(s)	764, 1417
BstSFI	CTRYAG	2 cut(s)	1545, 1884
BstSLI	GKGCMC	1 cut(s)	2395
BstSNI	TACGTA	1 cut(s)	1364
BstV1I	GCAGC	4 cut(s)	1189, 1211, 2181, 2314
BstV2I	GAAGAC	6 cut(s)	830, 1140, 1569, 1735, 1927, 2103
BstX2I	RGATCY	4 cut(s)	1012, 1405, 1425, 2719
BstYI	RGATCY	4 cut(s)	1012, 1405, 1425, 2719
Bsu15I	ATCGAT	1 cut(s)	1027
Bsu36I	CCTNAGG	1 cut(s)	867
BsuI	GTATCC	4 cut(s)	1365, 2344, 2377, 2472
BsuRI	GGCC	5 cut(s)	1053, 1598, 1965, 2509, 2661
BsuTUI	ATCGAT	1 cut(s)	1027
BtgI	CCRYGG	2 cut(s)	2497, 2807
BtrI	CACGTC	1 cut(s)	2327
BtsIMutI	CAGTG	4 cut(s)	1866, 1938, 2594, 2662
Cac8I	GCNNGC	6 cut(s)	95, 762, 1596, 1656, 2629, 2633
CaiI	CAGNNNCTG	1 cut(s)	1544
CciI	TCATGA	2 cut(s)	1021, 2152
CfoI	GCGC	3 cut(s)	1253, 2535, 2787
Cfr10I	RCCGGY	1 cut(s)	267
Cfr13I	GGNCC	5 cut(s)	484, 1393, 1835, 1963, 2507
Cfr9I	CCCGGG	1 cut(s)	2726
ClaI	ATCGAT	1 cut(s)	1027
CseI	GACGC	2 cut(s)	1332, 2467
CsiI	ACCWGGT	1 cut(s)	2062
Csp6I	GTAC	2 cut(s)	592, 2186
CspAI	ACCGGT	1 cut(s)	267
CviQI	GTAC	2 cut(s)	592, 2186
DraI	TTTAAA	1 cut(s)	1468
EaeI	YGGCCR	1 cut(s)	2659
Eam1104I	CTCTTC	8 cut(s)	113, 129, 828, 1350, 1493, 1944, 2371, 2570
EarI	CTCTTC	8 cut(s)	113, 129, 828, 1350, 1493, 1944, 2371, 2570
Eco105I	TACGTA	1 cut(s)	1364
Eco130I	CCWWGG	5 cut(s)	1567, 2345, 2463, 2497, 2773
Eco31I	GGTCTC	1 cut(s)	2306
Eco47I	GGWCC	3 cut(s)	484, 1393, 1835
Eco57I	CTGAAG	3 cut(s)	1445, 2097, 2210
Eco81I	CCTNAGG	1 cut(s)	867
Eco88I	CYCGRG	1 cut(s)	2726
EcoO109I	RGGNCCY	2 cut(s)	1963, 2507
EcoRII	CCWGG	6 cut(s)	1008, 1246, 2062, 2509, 2547, 2671
EcoT14I	CCWWGG	5 cut(s)	1567, 2345, 2463, 2497, 2773
ErhI	CCWWGG	5 cut(s)	1567, 2345, 2463, 2497, 2773
Esp3I	CGTCTC	1 cut(s)	1176
FaqI	GGGAC	3 cut(s)	70, 497, 2630
FauI	CCCGC	1 cut(s)	381
FbaI	TGATCA	1 cut(s)	1891
Fnu4HI	GCNGC	4 cut(s)	1178, 1200, 2195, 2303
Fsp4HI	GCNGC	4 cut(s)	1178, 1200, 2195, 2303
FspBI	CTAG	6 cut(s)	1112, 1511, 1575, 1665, 2682, 2774
GlaI	GCGC	3 cut(s)	1252, 2534, 2786
GluI	GCNGC	4 cut(s)	1178, 1200, 2195, 2303
GsuI	CTGGAG	2 cut(s)	1929, 1952
HaeII	RGCGCY	1 cut(s)	1254
HaeIII	GGCC	5 cut(s)	1053, 1598, 1965, 2509, 2661
HapII	CCGG	5 cut(s)	46, 100, 268, 487, 2727
HgaI	GACGC	2 cut(s)	1332, 2467
HhaI	GCGC	3 cut(s)	1253, 2535, 2787
Hin1I	GRCGYC	1 cut(s)	2459
Hin6I	GCGC	3 cut(s)	1251, 2533, 2785
HinP1I	GCGC	3 cut(s)	1251, 2533, 2785
HincII	GTYRAC	1 cut(s)	1305
HindII	GTYRAC	1 cut(s)	1305
HindIII	AAGCTT	1 cut(s)	933
HinfI	GANTC	6 cut(s)	26, 203, 325, 892, 1913, 1982
HpaI	GTTAAC	1 cut(s)	1305
HpaII	CCGG	5 cut(s)	46, 100, 268, 487, 2727
HphI	GGTGA	5 cut(s)	310, 592, 704, 1133, 2762
Hpy166II	GTNNAC	4 cut(s)	1305, 1838, 2186, 2393
Hpy188I	TCNGA	6 cut(s)	802, 1104, 1435, 1881, 2584, 2845
Hpy8I	GTNNAC	4 cut(s)	1305, 1838, 2186, 2393
HpyCH4III	ACNGT	4 cut(s)	1275, 1828, 2598, 2710
HpyCH4IV	ACGT	2 cut(s)	1363, 2326
HpyCH4V	TGCA	9 cut(s)	920, 1547, 1586, 1646, 1886, 2017, 2393, 2635, 2705
HpySE526I	ACGT	2 cut(s)	1363, 2326
Hsp92I	GRCGYC	1 cut(s)	2459
HspAI	GCGC	3 cut(s)	1251, 2533, 2785
Ksp22I	TGATCA	1 cut(s)	1891
KspAI	GTTAAC	1 cut(s)	1305
LguI	GCTCTTC	1 cut(s)	1350
LmnI	GCTCC	6 cut(s)	40, 102, 340, 802, 1609, 2299
Lsp1109I	GCAGC	4 cut(s)	1189, 1211, 2181, 2314
LweI	GCATC	6 cut(s)	133, 825, 1177, 1510, 1573, 1688
MabI	ACCWGGT	1 cut(s)	2062
MaeI	CTAG	6 cut(s)	1112, 1511, 1575, 1665, 2682, 2774
MaeII	ACGT	2 cut(s)	1363, 2326
MaeIII	GTNAC	3 cut(s)	1121, 1914, 2750
MbiI	CCGCTC	1 cut(s)	388
MflI	RGATCY	4 cut(s)	1012, 1405, 1425, 2719
MhlI	GDGCHC	2 cut(s)	45, 2395
MlsI	TGGCCA	1 cut(s)	2661
MluCI	AATT	5 cut(s)	1161, 1793, 2148, 2441, 2816
MluNI	TGGCCA	1 cut(s)	2661
MlyI	GAGTC	4 cut(s)	20, 334, 901, 1922
MmeI	TCCRAC	1 cut(s)	1310
Mox20I	TGGCCA	1 cut(s)	2661
MroXI	GAANNNNTTC	4 cut(s)	861, 935, 1458, 2148
MscI	TGGCCA	1 cut(s)	2661
MslI	CAYNNNNRTG	4 cut(s)	48, 765, 1142, 1943
Msp20I	TGGCCA	1 cut(s)	2661
MspA1I	CMGCKG	1 cut(s)	1654
MspCI	CTTAAG	1 cut(s)	719
MspI	CCGG	5 cut(s)	46, 100, 268, 487, 2727
Mva1269I	GAATGC	1 cut(s)	922
MvaI	CCWGG	6 cut(s)	1010, 1248, 2064, 2511, 2549, 2673
NciI	CCSGG	4 cut(s)	47, 488, 2727, 2728
NcoI	CCATGG	1 cut(s)	2497
NlaIV	GGNNCC	6 cut(s)	98, 485, 1014, 1964, 2212, 2508
NmeAIII	GCCGAG	1 cut(s)	152
NmuCI	GTSAC	3 cut(s)	1121, 1914, 2750
NspI	RCATGY	2 cut(s)	764, 1417
PaeI	GCATGC	1 cut(s)	764
PagI	TCATGA	2 cut(s)	1021, 2152
PciI	ACATGT	1 cut(s)	1413
PciSI	GCTCTTC	1 cut(s)	1350
PctI	GAATGC	1 cut(s)	922
PdmI	GAANNNNTTC	4 cut(s)	861, 935, 1458, 2148
PfeI	GAWTC	2 cut(s)	203, 1982
PinAI	ACCGGT	1 cut(s)	267
PkrI	GCNGC	4 cut(s)	1179, 1201, 2196, 2304
PleI	GAGTC	4 cut(s)	20, 333, 900, 1921
PpsI	GAGTC	4 cut(s)	20, 333, 900, 1921
Ppu21I	YACGTR	1 cut(s)	1364
PscI	ACATGT	1 cut(s)	1413
PshBI	ATTAAT	1 cut(s)	1128
Psp6I	CCWGG	6 cut(s)	1008, 1246, 2062, 2509, 2547, 2671
PspGI	CCWGG	6 cut(s)	1008, 1246, 2062, 2509, 2547, 2671
PspN4I	GGNNCC	6 cut(s)	98, 485, 1014, 1964, 2212, 2508
PspPI	GGNCC	5 cut(s)	484, 1393, 1835, 1963, 2507
PstI	CTGCAG	2 cut(s)	1549, 1888
PstNI	CAGNNNCTG	1 cut(s)	1544
PsuI	RGATCY	4 cut(s)	1012, 1405, 1425, 2719
PvuII	CAGCTG	1 cut(s)	1654
RsaI	GTAC	2 cut(s)	593, 2187
RsaNI	GTAC	2 cut(s)	592, 2186
RseI	CAYNNNNRTG	4 cut(s)	48, 765, 1142, 1943
SapI	GCTCTTC	1 cut(s)	1350
SatI	GCNGC	4 cut(s)	1178, 1200, 2195, 2303
Sau96I	GGNCC	5 cut(s)	484, 1393, 1835, 1963, 2507
SchI	GAGTC	4 cut(s)	20, 334, 901, 1922
SduI	GDGCHC	2 cut(s)	45, 2395
SexAI	ACCWGGT	1 cut(s)	2062
SfaNI	GCATC	6 cut(s)	133, 825, 1177, 1510, 1573, 1688
SfcI	CTRYAG	2 cut(s)	1545, 1884
SinI	GGWCC	3 cut(s)	484, 1393, 1835
SmaI	CCCGGG	1 cut(s)	2728
SmiMI	CAYNNNNRTG	4 cut(s)	48, 765, 1142, 1943
SmlI	CTYRAG	5 cut(s)	719, 806, 1148, 1446, 2622
SmoI	CTYRAG	5 cut(s)	719, 806, 1148, 1446, 2622
SnaBI	TACGTA	1 cut(s)	1364
SphI	GCATGC	1 cut(s)	764
Sse9I	AATT	5 cut(s)	1161, 1793, 2148, 2441, 2816
SsiI	CCGC	5 cut(s)	388, 1396, 1495, 2162, 2603
SspI	AATATT	2 cut(s)	973, 1108
SspMI	CTAG	6 cut(s)	1112, 1511, 1575, 1665, 2682, 2774
StyI	CCWWGG	5 cut(s)	1567, 2345, 2463, 2497, 2773
TaaI	ACNGT	4 cut(s)	1275, 1828, 2598, 2710
TaiI	ACGT	2 cut(s)	1366, 2329
TaqII	GACCGA	1 cut(s)	174
TasI	AATT	5 cut(s)	1161, 1793, 2148, 2441, 2816
TatI	WGTACW	2 cut(s)	591, 2185
TfiI	GAWTC	2 cut(s)	203, 1982
TscAI	CASTG	4 cut(s)	1873, 1945, 2601, 2662
TseFI	GTSAC	3 cut(s)	1121, 1914, 2750
TseI	GCWGC	4 cut(s)	1177, 1199, 2194, 2302
Tsp45I	GTSAC	3 cut(s)	1121, 1914, 2750
TspMI	CCCGGG	1 cut(s)	2726
TspRI	CASTG	4 cut(s)	1873, 1945, 2601, 2662
Vha464I	CTTAAG	1 cut(s)	719
VneI	GTGCAC	1 cut(s)	2391
VpaK11BI	GGWCC	3 cut(s)	484, 1393, 1835
VspI	ATTAAT	1 cut(s)	1128
XapI	RAATTY	2 cut(s)	2441, 2816
XceI	RCATGY	2 cut(s)	764, 1417
XmaI	CCCGGG	1 cut(s)	2726
XmaJI	CCTAGG	1 cut(s)	2773
XmnI	GAANNNNTTC	4 cut(s)	861, 935, 1458, 2148
XspI	CTAG	6 cut(s)	1112, 1511, 1575, 1665, 2682, 2774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.