U4 U6.U5 tri-snRNP-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16780 AT5G16780 AT5G16780 |
| fragaria_vesca | FvH4_4g15641 FvH4_4g15641 FvH4_4g15641 FvH4_4g15641 |
| malus_domestica | MD13G1193700.v1.1 MD16G1194300.v1.1 |
| prunus_persica | Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1 |
| pyrus_communis | pycom13g16590 pycom16g16410 |
| rosa_chinensis | RchiOBHm_Chr1g0362521 RchiOBHm_Chr4g0416151 RchiOBHm_Chr4g0416161 |
| rosa_laevigata | RLG00000008010 |
| rosa_multiflora | Rmu_co8134734.1_g000001 Rmu_sc0031164.1_g000005 Rmu_sc0034372.1_g000002 Rmu_sc0035291.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00360010 |
| rosa_rugosa | Rorug04G0139200 Rorug04G0139300 Rorug04G0139300 |
| rosa_samantha | Rh4AG201400 Rh4BG198700 Rh4BG198900 Rh4CG212600 Rh4CG212700 Rh4CG214400 Rh4DG198800 |
| rosa_wichuraiana | Rw4G017030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 70 |
| AclWI | GGATC | 2 cut(s) | 264, 393 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| Alw26I | GTCTC | 3 cut(s) | 402, 426, 484 |
| AlwI | GGATC | 2 cut(s) | 264, 393 |
| ApeKI | GCWGC | 1 cut(s) | 67 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AsuC2I | CCSGG | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 4 cut(s) | 70, 218, 340, 431 |
| BbvI | GCAGC | 1 cut(s) | 79 |
| BccI | CCATC | 2 cut(s) | 71, 410 |
| BcnI | CCSGG | 1 cut(s) | 179 |
| BcoDI | GTCTC | 3 cut(s) | 402, 426, 484 |
| BisI | GCNGC | 1 cut(s) | 68 |
| BlsI | GCNGC | 1 cut(s) | 69 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BpuMI | CCSGG | 1 cut(s) | 179 |
| BsaBI | GATNNNNATC | 1 cut(s) | 345 |
| BsaJI | CCNNGG | 1 cut(s) | 145 |
| BsaWI | WCCGGW | 1 cut(s) | 55 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 184, 214 |
| Bse8I | GATNNNNATC | 1 cut(s) | 345 |
| BseDI | CCNNGG | 1 cut(s) | 145 |
| BseGI | GGATG | 5 cut(s) | 10, 82, 289, 298, 421 |
| BseJI | GATNNNNATC | 1 cut(s) | 345 |
| BseRI | GAGGAG | 2 cut(s) | 44, 205 |
| BseXI | GCAGC | 1 cut(s) | 79 |
| BsiSI | CCGG | 2 cut(s) | 56, 178 |
| BsmAI | GTCTC | 3 cut(s) | 402, 426, 484 |
| Bsp143I | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| BspACI | CCGC | 1 cut(s) | 70 |
| BspPI | GGATC | 2 cut(s) | 264, 393 |
| BssECI | CCNNGG | 1 cut(s) | 145 |
| BssMI | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| Bst6I | CTCTTC | 3 cut(s) | 93, 131, 147 |
| BstC8I | GCNNGC | 2 cut(s) | 113, 125 |
| BstDEI | CTNAG | 1 cut(s) | 267 |
| BstF5I | GGATG | 5 cut(s) | 10, 82, 289, 298, 421 |
| BstKTI | GATC | 5 cut(s) | 43, 259, 349, 388, 474 |
| BstMAI | GTCTC | 3 cut(s) | 402, 426, 484 |
| BstMBI | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 1 cut(s) | 79 |
| BtsCI | GGATG | 5 cut(s) | 10, 82, 289, 298, 421 |
| Cac8I | GCNNGC | 2 cut(s) | 113, 125 |
| CviAII | CATG | 1 cut(s) | 362 |
| CviJI | RGCY | 2 cut(s) | 144, 498 |
| CviKI_1 | RGCY | 2 cut(s) | 144, 498 |
| DdeI | CTNAG | 1 cut(s) | 267 |
| DpnI | GATC | 5 cut(s) | 42, 258, 348, 387, 473 |
| DpnII | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| Eam1104I | CTCTTC | 3 cut(s) | 93, 131, 147 |
| EarI | CTCTTC | 3 cut(s) | 93, 131, 147 |
| EcoRI | GAATTC | 1 cut(s) | 82 |
| FaeI | CATG | 1 cut(s) | 365 |
| FaiI | YATR | 7 cut(s) | 18, 39, 117, 129, 303, 345, 363 |
| FatI | CATG | 1 cut(s) | 361 |
| FauI | CCCGC | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 1 cut(s) | 68 |
| FokI | GGATG | 5 cut(s) | 17, 89, 296, 305, 428 |
| Fsp4HI | GCNGC | 1 cut(s) | 68 |
| GluI | GCNGC | 1 cut(s) | 68 |
| HapII | CCGG | 2 cut(s) | 56, 178 |
| Hin1II | CATG | 1 cut(s) | 365 |
| HinfI | GANTC | 2 cut(s) | 50, 236 |
| HpaII | CCGG | 2 cut(s) | 56, 178 |
| HphI | GGTGA | 4 cut(s) | 70, 218, 340, 431 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 2 cut(s) | 44, 350 |
| HpyAV | CCTTC | 4 cut(s) | 274, 349, 388, 470 |
| HpyF3I | CTNAG | 1 cut(s) | 267 |
| Hsp92II | CATG | 1 cut(s) | 365 |
| Kzo9I | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| LmnI | GCTCC | 2 cut(s) | 120, 358 |
| LpnPI | CCDG | 4 cut(s) | 69, 97, 191, 479 |
| Lsp1109I | GCAGC | 1 cut(s) | 79 |
| MalI | GATC | 5 cut(s) | 42, 258, 348, 387, 473 |
| MboI | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| MboII | GAAGA | 5 cut(s) | 110, 145, 148, 164, 466 |
| MluCI | AATT | 1 cut(s) | 82 |
| MlyI | GAGTC | 1 cut(s) | 44 |
| MspA1I | CMGCKG | 1 cut(s) | 70 |
| MspI | CCGG | 2 cut(s) | 56, 178 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| NciI | CCSGG | 1 cut(s) | 179 |
| NdeII | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| NlaIII | CATG | 1 cut(s) | 365 |
| NmeAIII | GCCGAG | 1 cut(s) | 170 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| PkrI | GCNGC | 1 cut(s) | 69 |
| PleI | GAGTC | 1 cut(s) | 44 |
| PpsI | GAGTC | 1 cut(s) | 44 |
| SatI | GCNGC | 1 cut(s) | 68 |
| Sau3AI | GATC | 5 cut(s) | 40, 256, 346, 385, 471 |
| SchI | GAGTC | 1 cut(s) | 44 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SetI | ASST | 3 cut(s) | 17, 188, 330 |
| Sse9I | AATT | 1 cut(s) | 82 |
| SsiI | CCGC | 1 cut(s) | 70 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| TaqI | TCGA | 5 cut(s) | 43, 188, 349, 388, 474 |
| TasI | AATT | 1 cut(s) | 82 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| TseI | GCWGC | 1 cut(s) | 67 |
| TspDTI | ATGAA | 1 cut(s) | 33 |
| XapI | RAATTY | 1 cut(s) | 82 |