Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003796

Physical Location & Seq

Genomic Coordinates Reverse (-)

24229511 .. 24237285

Gene Structure 7775 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008010

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGACATTTGCCTTGAGGGTTGGTCAAGAATGCATCGCTTACAGTGACACCGAAACCTTACGTGAGTTTGGTGTGTTCCGAATGGATGTGGAGAGGTATGAACAGCGTGAGGAGAGATATGATCGAGATGACTCTCCGGTGAGAGAGCAGCGGGAGGATGGGAATTCTGATGATTTAGAAGAGAATGGGAGCAGGCATAGGAGCAAGGATAGGAAGAAGAGTAGCCGAGGGGAAGAGAGGGATAGTAGAAGTAAAGACCGGGATAGGTCGAGGAGAAGTGGTGGTGATGATGTTGTCAAGGAAAGAGAGAAAGAATCTAAAGATTTGGAAAAGGATCGTGTGTCTAAGGAAAGGAGGAAGGATGATAGGGATGAGCGATATAAGGATAGGAGTAGAGATAACAAGGTGAGGGAGAGAGATTATGATCGAGAGAAGGAGCATGAGAGGGGGAAAGACAGAAAGGATCGAGGGAAGGATAGAGAGGGAGAGAAGGATGGTGATAAAGGACGAGACAAAGAGAGAGCGAAAGAGAAGATTAGGGATAGGGAAAAGGAAAGGGAAAGAGAAAAGGAGAGAGAAAAACATAAAGATCGAGAGAAGGGGAGGGAAAACTTGAAGGATACAGATAGGGAGAAGGGGAAAGATAAATATAGGGAAAAGGAGAGGGAGGCAGATCAAGATAAGGAGAAATCAAGAGATAGACAGAGCAGGAGAAGCATGGATGCTTATGAGTCGAGCAAGATTGGGGAAAGGGATGAGAATGCTAAGCTTAATGATGACAATAACAGGGATAAGGACATTATTAAGCAAGGTAAGATGTCCCATAATGCTGCTTATGAACAAAATGCTGAGGGTTTGTCAGGTGGAGCACATCTATCGGCATCCGAGCTTGAGGAACGCATCCTGAAAACGAAGGAAGAGAGGTTAAAGAAGAAAACTGAAGACATTCCTGAGGTTTTAGCTTGGGTTAATAGGAGTCGTAAGCTCGAAGAGAAAAGGAATGCTGAAAAAGAGAAAGCTTTGCAGCTTTCAAAGATCTTTGAGGAACAGGACAATGTTGCCGAAGAAGAAAGTGAAGATGAGGAGGCAGCTCAGGATATGACTAATAATCTAGCTGGGGTTAAAGTTCTTCATGGCATTGATAAAGTGATGGACGGTGGCGCAGTTGTTTTAACACTCAAGGATCAGAACATTCTAGCTGATGGTGACGTTAATGAAGATGTTGATATGCTTGAGAATGTGGAACTTGGTGAGCAGAAGCAGCGAGATGACGCTTACAAGGCAGCAAAGAAAAAAACAGGGATTTATGCTGATAAGTTTAACGATGATCCTACTTTAGAGAAGAAAATTCTTCCACAATATGATGATCCTGCTGCAGATGAGGGGCTAACACTAGATGCAAGAGGACGGTTTACTGGTGAAGCAGAGAAGAAACTTGAAGAGCTACGTATGAGGCTACAGGGTGGTTCCACGAAAAACCGCTCTGAAGATCTCAACACGTCTGGAAAGATCACATCTGATTACTATACAAATGAAGAAATGCTGCAATTTAAAAAGCCCAAGAAAAAGAAAACCTTCAGGAAGAAGGAGAAGCTAGATCTAGATGCCCTTGAAGCAGAAGCCGTATCTGCAGGGCTGGGTGCTGCGGACCTCGGTTCCAGGAAGGATGGAAAGAGGCAGGCCACTAGAGAGGAGCAAGAAAGATTAGAAGCTGAGAAGAGAAATAGTGCATACCAGTTAGCTAAAGATAAAGCAAATGAGGCATCTAAAGCGTTGCGACAGGACACTCAATCTGTTAAGGCAGAGGAAGATGAAACTCCTTACTTTGCTGATGATTATGATGAAATTGATAAAGCCTTGGAGAGATCAAGGAAAATAGCTCTACAAAAGAAAGAGGAGGAGAAAGTCTCCGGTCCAAAGGCAATTGCTCGCCTTGCCACAGCAGCTGCAAGCAGCACAACTGCAGATGATCAATTCTCGTCAACTGGACAGTCACAGGAAAACAAGGTTGTGTTCACAGAGATGGAAGAATTTGTCTTGGGCCTACAGCTTGAAGAAGAATCCCACAAGCCTGAAAGTGAAGATGTGTTTATGCAAGAAGATGAAGAACCAAAAGCTTCTGTAGACGTAGAAATGGGCGAGCCTAGTGGATGGACTGAAGTTAATGAAATTGAAGAGAACAAAGCACAATCTGCTGCTGATGATAATGAGGAAATAGTTCCAGATGAAACTATCCATGAAGTTGCAGTTGGGAAAGGTTTATCAGGTGTGCTAAAACTGCTTAAAGAGCGAGGTAATCTCAAAGAAGGTATTGAATGGGGTGGTAGGAACATGGACAAGAAGAAAAGCAAACTTTTAGGCATCGTAGATGATGACGAGGAGCTAAAGGAGACCCATACAGTGCGTCGGAGAAAGGATGAACAAAATTATACTCGTTCGTCAGGCCATCAAAAGGAGATGCGTCCTCCTAAAGTCTATCAGGAAAAGGATATTCACATTGAGAGAACTGACGAATTTGGTCGAACTTTGACACCAAAGGAAGGCTTTCGGGTACTTTCACATAAATTTCATGGGAAGGGGCCTGGAAAAATGAAGCAAGAAAAGCGCATGAAGCAATACCACGAAGAACTCAAGTTGAAGCAGATGAAGAGTTCAGATACACCATCCCTGTCTGTGGAGAGGATGAGGGAAACTCAAGCTCGGTTACAGACACCCTATCTTGTTCTCAGTGGCCATGTTAAACCAGGGCAAACTAGCGATCCCAGAAGTGGTTTTGCTACTGTGGAGAAGGATCTCCCAGGGGGCTTGACGCCTATGCTTGGTGACAGAAAGGTCGAACATTTTCTGGGGATAAAGCGCAAAGATGAAACTGAAAGTTCAGGCACACCGAAGAAGCCAAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000481 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008380 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009933 GO:0009965 GO:0009987 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010467 GO:0010588 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0022622 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048528 GO:0048532 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0061458 GO:0065003 GO:0070013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090567 GO:0090696 GO:0090698 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1901360 GO:1905392 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SART-1

Protein Analysis

969

Amino Acids

111.64

Weight (kDa)

5.6

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SART-1	PF03343	315 - 876	3.4e-70	SART-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16780 AT5G16780 AT5G16780
fragaria_vesca	FvH4_4g15641 FvH4_4g15641 FvH4_4g15641 FvH4_4g15641
malus_domestica	MD13G1193700.v1.1 MD16G1194300.v1.1
prunus_persica	Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1
pyrus_communis	pycom13g16590 pycom16g16410
rosa_chinensis	RchiOBHm_Chr1g0362521 RchiOBHm_Chr4g0416151 RchiOBHm_Chr4g0416161
rosa_laevigata	RLG00000008010
rosa_multiflora	Rmu_co8134734.1_g000001 Rmu_sc0031164.1_g000005 Rmu_sc0034372.1_g000002 Rmu_sc0035291.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360010
rosa_rugosa	Rorug04G0139200 Rorug04G0139300 Rorug04G0139300
rosa_samantha	Rh4AG201400 Rh4BG198700 Rh4BG198900 Rh4CG212600 Rh4CG212700 Rh4CG214400 Rh4DG198800
rosa_wichuraiana	Rw4G017030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2831
AccBSI	CCGCTC	1 cut(s)	1482
AccI	GTMKAC	1 cut(s)	2124
AciI	CCGC	3 cut(s)	151, 1480, 1646
AclWI	GGATC	7 cut(s)	342, 471, 1191, 1322, 1361, 2753, 2799
AcoI	YGGCCR	1 cut(s)	2731
AcsI	RAATTY	5 cut(s)	163, 1347, 2030, 2513, 2564
AcuI	CTGAAG	4 cut(s)	960, 1506, 1561, 2178
AcyI	GRCGYC	1 cut(s)	2810
AfaI	GTAC	1 cut(s)	2553
AfiI	CCNNNNNNNGG	5 cut(s)	2452, 2540, 2674, 2768, 2819
AflIII	ACRYGT	1 cut(s)	1497
AgsI	TTSAA	8 cut(s)	616, 1032, 1439, 1613, 2054, 2174, 2315, 2638
AjiI	CACGTC	1 cut(s)	1500
AjnI	CCWGG	4 cut(s)	1658, 2581, 2743, 2797
AjuI	GAANNNNNNNTTGG	2 cut(s)	2232, 2264
Alw21I	GWGCWC	1 cut(s)	871
Alw26I	GTCTC	3 cut(s)	504, 1912, 2384
AlwI	GGATC	7 cut(s)	342, 471, 1191, 1322, 1361, 2753, 2799
AlwNI	CAGNNNCTG	1 cut(s)	1946
AoxI	GGCC	5 cut(s)	1680, 2041, 2443, 2579, 2731
ApoI	RAATTY	5 cut(s)	163, 1347, 2030, 2513, 2564
Asp700I	GAANNNNTTC	5 cut(s)	945, 1574, 2217, 2544, 2841
AspLEI	GCGC	3 cut(s)	1163, 2607, 2859
AspS9I	GGNCC	4 cut(s)	1648, 1913, 2041, 2579
AsuC2I	CCSGG	1 cut(s)	260
AsuHPI	GGTGA	8 cut(s)	151, 296, 418, 509, 1217, 1262, 1430, 2834
AvaII	GGWCC	2 cut(s)	1648, 1913
AxyI	CCTNAGG	1 cut(s)	951
BalI	TGGCCA	1 cut(s)	2733
BbsI	GAAGAC	1 cut(s)	948
Bbv12I	GWGCWC	1 cut(s)	871
BbvCI	CCTCAGC	1 cut(s)	849
BccI	CCATC	9 cut(s)	152, 488, 1144, 1196, 1661, 2017, 2145, 2454, 2671
BceAI	ACGGC	1 cut(s)	1607
BcgI	CGANNNNNNTGC	2 cut(s)	858, 892
BciT130I	CCWGG	4 cut(s)	1660, 2583, 2745, 2799
BciVI	GTATCC	1 cut(s)	613
BclI	TGATCA	1 cut(s)	1969
BcnI	CCSGG	1 cut(s)	260
BcoDI	GTCTC	3 cut(s)	504, 1912, 2384
BfaI	CTAG	8 cut(s)	1112, 1196, 1394, 1595, 1601, 1686, 2145, 2754
BfmI	CTRYAG	6 cut(s)	1374, 1457, 1629, 1962, 2045, 2121
BfuI	GTATCC	1 cut(s)	613
BglII	AGATCT	3 cut(s)	1035, 1489, 1597
BlpI	GCTNAGC	1 cut(s)	765
Bme1390I	CCNGG	5 cut(s)	260, 1660, 2583, 2745, 2799
Bme18I	GGWCC	2 cut(s)	1648, 1913
BmgBI	CACGTC	1 cut(s)	1500
BmgT120I	GGNCC	4 cut(s)	1648, 1913, 2041, 2579
BmiI	GGNNCC	3 cut(s)	1468, 1657, 2580
BmrFI	CCNGG	5 cut(s)	260, 1660, 2583, 2745, 2799
BmsI	GCATC	9 cut(s)	42, 712, 890, 909, 1387, 1594, 1772, 2370, 2448
BpiI	GAAGAC	1 cut(s)	948
BplI	GAGNNNNNCTC	6 cut(s)	1892, 1924, 2283, 2315, 2677, 2709
Bpu10I	CCTNAGC	2 cut(s)	849, 1092
Bpu1102I	GCTNAGC	1 cut(s)	765
BpuEI	CTTGAG	6 cut(s)	34, 911, 1163, 1253, 2615, 2679
BpuMI	CCSGG	1 cut(s)	260
BsaAI	YACGTR	2 cut(s)	62, 1448
BsaBI	GATNNNNATC	1 cut(s)	423
BsaHI	GRCGYC	1 cut(s)	2810
BsaI	GGTCTC	1 cut(s)	2384
BsaJI	CCNNGG	6 cut(s)	226, 1651, 1857, 2744, 2797, 2798
BsaWI	WCCGGW	2 cut(s)	136, 1910
BsaXI	ACNNNNNCTCC	2 cut(s)	265, 295
Bsc4I	CCNNNNNNNGG	5 cut(s)	2452, 2540, 2674, 2768, 2819
Bse1I	ACTGG	3 cut(s)	1420, 1735, 1990
Bse21I	CCTNAGG	1 cut(s)	951
Bse8I	GATNNNNATC	1 cut(s)	423
BseBI	CCWGG	4 cut(s)	1660, 2583, 2745, 2799
BseDI	CCNNGG	6 cut(s)	226, 1651, 1857, 2744, 2797, 2798
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	5 cut(s)	2452, 2540, 2674, 2768, 2819
BseMII	CTCAG	5 cut(s)	840, 942, 1106, 1704, 2740
BseNI	ACTGG	3 cut(s)	1420, 1735, 1990
BseRI	GAGGAG	7 cut(s)	125, 286, 1097, 1706, 1910, 1913, 2393
BseYI	CCCAGC	2 cut(s)	1115, 1636
BshFI	GGCC	5 cut(s)	1682, 2043, 2445, 2581, 2733
BsiHKAI	GWGCWC	1 cut(s)	871
BsiSI	CCGG	3 cut(s)	137, 259, 1911
BslFI	GGGAC	1 cut(s)	805
BslI	CCNNNNNNNGG	5 cut(s)	2452, 2540, 2674, 2768, 2819
BsmAI	GTCTC	3 cut(s)	504, 1912, 2384
BsmFI	GGGAC	1 cut(s)	805
BsmI	GAATGC	3 cut(s)	35, 766, 1006
BsnI	GGCC	5 cut(s)	1682, 2043, 2445, 2581, 2733
Bso31I	GGTCTC	1 cut(s)	2384
Bsp1286I	GDGCHC	1 cut(s)	871
Bsp1720I	GCTNAGC	1 cut(s)	765
BspACI	CCGC	3 cut(s)	151, 1480, 1646
BspANI	GGCC	5 cut(s)	1682, 2043, 2445, 2581, 2733
BspCNI	CTCAG	5 cut(s)	841, 943, 1105, 1705, 2739
BspLI	GGNNCC	3 cut(s)	1468, 1657, 2580
BspMAI	CTGCAG	3 cut(s)	1378, 1633, 1966
BspPI	GGATC	7 cut(s)	342, 471, 1191, 1322, 1361, 2753, 2799
BspQI	GCTCTTC	1 cut(s)	1434
BspTNI	GGTCTC	1 cut(s)	2384
BsrBI	CCGCTC	1 cut(s)	1482
BsrI	ACTGG	3 cut(s)	1420, 1735, 1990
BssECI	CCNNGG	6 cut(s)	226, 1651, 1857, 2744, 2797, 2798
BssNI	GRCGYC	1 cut(s)	2810
BssT1I	CCWWGG	1 cut(s)	1857
Bst2UI	CCWGG	4 cut(s)	1660, 2583, 2745, 2799
Bst4CI	ACNGT	6 cut(s)	44, 1157, 1410, 1992, 2401, 2782
Bst6I	CTCTTC	9 cut(s)	174, 212, 228, 912, 984, 1434, 1712, 2169, 2642
BstACI	GRCGYC	1 cut(s)	2810
BstAPI	GCANNNNNTGC	1 cut(s)	2192
BstBAI	YACGTR	2 cut(s)	62, 1448
BstC8I	GCNNGC	5 cut(s)	194, 1680, 1930, 1951, 2141
BstDEI	CTNAG	7 cut(s)	345, 765, 849, 951, 1092, 1713, 2726
BstHHI	GCGC	3 cut(s)	1163, 2607, 2859
BstMAI	GTCTC	3 cut(s)	504, 1912, 2384
BstNI	CCWGG	4 cut(s)	1660, 2583, 2745, 2799
BstSCI	CCNGG	5 cut(s)	258, 1658, 2581, 2743, 2797
BstSFI	CTRYAG	6 cut(s)	1374, 1457, 1629, 1962, 2045, 2121
BstSNI	TACGTA	1 cut(s)	1448
BstV2I	GAAGAC	1 cut(s)	948
BstX2I	RGATCY	4 cut(s)	1035, 1489, 1597, 2791
BstYI	RGATCY	4 cut(s)	1035, 1489, 1597, 2791
Bsu36I	CCTNAGG	1 cut(s)	951
BsuI	GTATCC	1 cut(s)	613
BsuRI	GGCC	5 cut(s)	1682, 2043, 2445, 2581, 2733
BtgZI	GCGATG	1 cut(s)	19
BtrI	CACGTC	1 cut(s)	1500
BtsIMutI	CAGTG	3 cut(s)	49, 2406, 2734
Cac8I	GCNNGC	5 cut(s)	194, 1680, 1930, 1951, 2141
CaiI	CAGNNNCTG	1 cut(s)	1946
CfoI	GCGC	3 cut(s)	1163, 2607, 2859
Cfr13I	GGNCC	4 cut(s)	1648, 1913, 2041, 2579
CseI	GACGC	4 cut(s)	1280, 2393, 2450, 2818
Csp6I	GTAC	1 cut(s)	2552
CviAII	CATG	8 cut(s)	440, 718, 1133, 2237, 2332, 2570, 2608, 2735
CviQI	GTAC	1 cut(s)	2552
DdeI	CTNAG	7 cut(s)	345, 765, 849, 951, 1092, 1713, 2726
DraI	TTTAAA	1 cut(s)	1552
DrdI	GACNNNNNNGTC	1 cut(s)	2831
DseDI	GACNNNNNNGTC	1 cut(s)	2831
EaeI	YGGCCR	1 cut(s)	2731
Eam1104I	CTCTTC	9 cut(s)	174, 212, 228, 912, 984, 1434, 1712, 2169, 2642
EarI	CTCTTC	9 cut(s)	174, 212, 228, 912, 984, 1434, 1712, 2169, 2642
Eco105I	TACGTA	1 cut(s)	1448
Eco130I	CCWWGG	1 cut(s)	1857
Eco31I	GGTCTC	1 cut(s)	2384
Eco47I	GGWCC	2 cut(s)	1648, 1913
Eco57I	CTGAAG	4 cut(s)	960, 1506, 1561, 2178
Eco81I	CCTNAGG	1 cut(s)	951
EcoO109I	RGGNCCY	1 cut(s)	2579
EcoRI	GAATTC	1 cut(s)	163
EcoRII	CCWGG	4 cut(s)	1658, 2581, 2743, 2797
EcoT14I	CCWWGG	1 cut(s)	1857
EcoT22I	ATGCAT	1 cut(s)	35
ErhI	CCWWGG	1 cut(s)	1857
FaeI	CATG	8 cut(s)	443, 721, 1136, 2240, 2335, 2573, 2611, 2738
FalI	AAGNNNNNCTT	4 cut(s)	1559, 1591, 2528, 2560
FaqI	GGGAC	1 cut(s)	805
FatI	CATG	8 cut(s)	439, 717, 1132, 2236, 2331, 2569, 2607, 2734
FauI	CCCGC	1 cut(s)	144
FbaI	TGATCA	1 cut(s)	1969
FblI	GTMKAC	1 cut(s)	2124
FspBI	CTAG	8 cut(s)	1112, 1196, 1394, 1595, 1601, 1686, 2145, 2754
GlaI	GCGC	3 cut(s)	1162, 2606, 2858
GsaI	CCCAGC	2 cut(s)	1119, 1640
HaeIII	GGCC	5 cut(s)	1682, 2043, 2445, 2581, 2733
HapII	CCGG	3 cut(s)	137, 259, 1911
HgaI	GACGC	4 cut(s)	1280, 2393, 2450, 2818
HhaI	GCGC	3 cut(s)	1163, 2607, 2859
Hin1I	GRCGYC	1 cut(s)	2810
Hin1II	CATG	8 cut(s)	443, 721, 1136, 2240, 2335, 2573, 2611, 2738
Hin6I	GCGC	3 cut(s)	1161, 2605, 2857
HinP1I	GCGC	3 cut(s)	1161, 2605, 2857
HincII	GTYRAC	1 cut(s)	1983
HindII	GTYRAC	1 cut(s)	1983
HindIII	AAGCTT	3 cut(s)	767, 1017, 2115
HinfI	GANTC	5 cut(s)	131, 314, 731, 976, 2060
HpaII	CCGG	3 cut(s)	137, 259, 1911
HphI	GGTGA	8 cut(s)	151, 296, 418, 509, 1217, 1262, 1430, 2834
Hpy166II	GTNNAC	4 cut(s)	1413, 1983, 2016, 2125
Hpy188I	TCNGA	8 cut(s)	80, 169, 886, 1188, 1486, 1519, 2409, 2656
Hpy8I	GTNNAC	4 cut(s)	1413, 1983, 2016, 2125
Hpy99I	CGWCG	1 cut(s)	2409
HpyCH4III	ACNGT	6 cut(s)	44, 1157, 1410, 1992, 2401, 2782
HpyCH4IV	ACGT	5 cut(s)	61, 1209, 1447, 1499, 2127
HpyF3I	CTNAG	7 cut(s)	345, 765, 849, 951, 1092, 1713, 2726
HpySE526I	ACGT	5 cut(s)	61, 1209, 1447, 1499, 2127
Hsp92I	GRCGYC	1 cut(s)	2810
Hsp92II	CATG	8 cut(s)	443, 721, 1136, 2240, 2335, 2573, 2611, 2738
HspAI	GCGC	3 cut(s)	1161, 2605, 2857
Ksp22I	TGATCA	1 cut(s)	1969
LguI	GCTCTTC	1 cut(s)	1434
LmnI	GCTCC	6 cut(s)	189, 201, 436, 866, 1693, 2380
LweI	GCATC	9 cut(s)	42, 712, 890, 909, 1387, 1594, 1772, 2370, 2448
MaeI	CTAG	8 cut(s)	1112, 1196, 1394, 1595, 1601, 1686, 2145, 2754
MaeII	ACGT	5 cut(s)	61, 1209, 1447, 1499, 2127
MaeIII	GTNAC	5 cut(s)	44, 1205, 1992, 2703, 2822
MbiI	CCGCTC	1 cut(s)	1482
MfeI	CAATTG	1 cut(s)	1923
MflI	RGATCY	4 cut(s)	1035, 1489, 1597, 2791
MhlI	GDGCHC	1 cut(s)	871
MlsI	TGGCCA	1 cut(s)	2733
MluNI	TGGCCA	1 cut(s)	2733
MlyI	GAGTC	3 cut(s)	125, 740, 985
MmeI	TCCRAC	1 cut(s)	2387
Mox20I	TGGCCA	1 cut(s)	2733
Mph1103I	ATGCAT	1 cut(s)	35
MroXI	GAANNNNTTC	5 cut(s)	945, 1574, 2217, 2544, 2841
MscI	TGGCCA	1 cut(s)	2733
MslI	CAYNNNNRTG	1 cut(s)	2021
Msp20I	TGGCCA	1 cut(s)	2733
MspA1I	CMGCKG	2 cut(s)	151, 1946
MspI	CCGG	3 cut(s)	137, 259, 1911
MspR9I	CCNGG	5 cut(s)	260, 1660, 2583, 2745, 2799
MunI	CAATTG	1 cut(s)	1923
Mva1269I	GAATGC	3 cut(s)	35, 766, 1006
MvaI	CCWGG	4 cut(s)	1660, 2583, 2745, 2799
NciI	CCSGG	1 cut(s)	260
NlaIII	CATG	8 cut(s)	443, 721, 1136, 2240, 2335, 2573, 2611, 2738
NlaIV	GGNNCC	3 cut(s)	1468, 1657, 2580
NmeAIII	GCCGAG	1 cut(s)	251
NmuCI	GTSAC	4 cut(s)	44, 1205, 1992, 2822
NsiI	ATGCAT	1 cut(s)	35
PasI	CCCWGGG	1 cut(s)	2798
PciSI	GCTCTTC	1 cut(s)	1434
PctI	GAATGC	3 cut(s)	35, 766, 1006
PdmI	GAANNNNTTC	5 cut(s)	945, 1574, 2217, 2544, 2841
PfeI	GAWTC	2 cut(s)	314, 2060
PfoI	TCCNGGA	1 cut(s)	1658
PleI	GAGTC	3 cut(s)	125, 739, 984
PpsI	GAGTC	3 cut(s)	125, 739, 984
Ppu21I	YACGTR	2 cut(s)	62, 1448
Psp6I	CCWGG	4 cut(s)	1658, 2581, 2743, 2797
PspFI	CCCAGC	2 cut(s)	1115, 1636
PspGI	CCWGG	4 cut(s)	1658, 2581, 2743, 2797
PspN4I	GGNNCC	3 cut(s)	1468, 1657, 2580
PspPI	GGNCC	4 cut(s)	1648, 1913, 2041, 2579
PstI	CTGCAG	3 cut(s)	1378, 1633, 1966
PstNI	CAGNNNCTG	1 cut(s)	1946
PsuI	RGATCY	4 cut(s)	1035, 1489, 1597, 2791
PvuII	CAGCTG	1 cut(s)	1946
RsaI	GTAC	1 cut(s)	2553
RsaNI	GTAC	1 cut(s)	2552
RseI	CAYNNNNRTG	1 cut(s)	2021
SapI	GCTCTTC	1 cut(s)	1434
Sau96I	GGNCC	4 cut(s)	1648, 1913, 2041, 2579
SchI	GAGTC	3 cut(s)	125, 740, 985
ScrFI	CCNGG	5 cut(s)	260, 1660, 2583, 2745, 2799
SduI	GDGCHC	1 cut(s)	871
SfaNI	GCATC	9 cut(s)	42, 712, 890, 909, 1387, 1594, 1772, 2370, 2448
SfcI	CTRYAG	6 cut(s)	1374, 1457, 1629, 1962, 2045, 2121
SinI	GGWCC	2 cut(s)	1648, 1913
SmiMI	CAYNNNNRTG	1 cut(s)	2021
SmlI	CTYRAG	6 cut(s)	13, 890, 1178, 1232, 2630, 2694
SmoI	CTYRAG	6 cut(s)	13, 890, 1178, 1232, 2630, 2694
SnaBI	TACGTA	1 cut(s)	1448
SsiI	CCGC	3 cut(s)	151, 1480, 1646
SspMI	CTAG	8 cut(s)	1112, 1196, 1394, 1595, 1601, 1686, 2145, 2754
StyD4I	CCNGG	5 cut(s)	258, 1658, 2581, 2743, 2797
StyI	CCWWGG	1 cut(s)	1857
TaaI	ACNGT	6 cut(s)	44, 1157, 1410, 1992, 2401, 2782
TaiI	ACGT	5 cut(s)	64, 1212, 1450, 1502, 2130
TaqI	TCGA	9 cut(s)	124, 269, 427, 466, 592, 734, 987, 2521, 2835
TfiI	GAWTC	2 cut(s)	314, 2060
TscAI	CASTG	3 cut(s)	49, 2406, 2734
TseFI	GTSAC	4 cut(s)	44, 1205, 1992, 2822
Tsp45I	GTSAC	4 cut(s)	44, 1205, 1992, 2822
TspRI	CASTG	3 cut(s)	49, 2406, 2734
VpaK11BI	GGWCC	2 cut(s)	1648, 1913
XapI	RAATTY	5 cut(s)	163, 1347, 2030, 2513, 2564
XbaI	TCTAGA	1 cut(s)	1600
XmiI	GTMKAC	1 cut(s)	2124
XmnI	GAANNNNTTC	5 cut(s)	945, 1574, 2217, 2544, 2841
XspI	CTAG	8 cut(s)	1112, 1196, 1394, 1595, 1601, 1686, 2145, 2754
Zsp2I	ATGCAT	1 cut(s)	35

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.