Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0003796

Physical Location & Seq

Genomic Coordinates Forward (+)

48675477 .. 48695178

Gene Structure 19702 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG201400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGGATGTGGAGAGGTATGAACAGCGTGAGGAGAGATATGATCGAGATGACTCTCCGGTGAGAGAGCAGCGGGAGGATGGGAATTCTGATGATTTAGAAGAGAATGGGAGCAGGCATAGGAGCAAGGATAGGAAGAAGAGTAGCCGAGGGGAAGAGAGGGATAGTAGAAGTAAAGACCGGGATAGGTCGAGGAGAAGTGGTGGTGATGATGTTGTCAAGGAAAGAGAGAAAGAATCTAAAGATTTGGAAAAGGATCGTGTGTCTAAGGAAAGGAGGAAAGATGATAGGGATGAGAGATATAAGGATAGGAGTAGAGATAACAAGGTGAGGGAGAGAGATTATGATCGAGAGAAGGAGCATGAGAGGGGAAAAGACAGAAAGGATCGAGGGAAGGATAGAGAGGGAGAGAAGGATGGTGATAAAGGACGAGACAAAGAGAGGGCGAAAGAGAAGATTAGGGATAGGGAAAAGGAAAGGGAAAGGGACAGGGCTAAAGAAAAAGAAAGAGAAAAGGAGAGAGAAAAGCATAAAGATCGAGAGAAGGGGAGGGAAAGCTTGAAGGATACTGATAGGGAGAAGGGGAAAGATAAATATAGGGAAAAGGAGAGGGAGGCAGATCAAGATAAGGAGAAATCAAGAGACAGACAGAGCAGGAGAAGCGTGGATGCTTATGAGTCGAGCAAGATTGGGGAAAGGGATGAGAGTGCTAAGCTTAATGATGACGATAACAGGGATAAGGACATTATTAAGCAAGGTAAGATGTCCCATAATGCTTCTTATGAACAAAATGCCGAGGGTTTGTCAGGTGGAGCACATCTATCAGCATCCGAGCTTGAGGAACGCATCCTGAAAACGAAGGAAGAGAGGTTAAAGAAGAAAACTGAAGACATTCCTGAGGTTTTAGCTTGGGTTAATAGGAGTCGTAAGCTCGAGGAGAAAAGGTATGCTGAAAAAGAGAAAGCTTTGCAGCTTTCAAAGATCTTTGAGGAACAGGACAATGTTGCCGAAGAAGAAAGTGAAGATGAGGAGGCAGCTCAGGATATGACTCATAATCTAGCTGGGGTTAAAGTCCTTCATGGCATTGATAAAGTGATGGACGGTGGCGCGGTTGTTTTAACACTCAAGGATCAGAACATTCTAGCTGATGGTGACATTAATGAAGATGTTGATATGCTTGAGAATGTGGAGCTTGGTGAGCAGAAGCAGCGAGATGACGCTTACAAGGCAGCAAAGAAAAAAACAGGGATTTATGCTGATAAGTTTAACGATGATCCTACTTTAGAGAAGAAAATTCTTCCACAATATGATGATCCTGCTGCAGATGAGGGGCTAACACTAGATGCAAGAGGAAGCTTTACTGGCGAAGCAGAGAAGAAACTTGAAGAGCTACGTATGAGGCTACAGGGTGGTTTCACGAAAAACTGCTCTGAAGATCTCAACATGTCTGGAAAGATCACATCTGACTACTATACAAATGAAGAAATGCTGCAATTTAAAAAGCCCAAGAAAAAGAAAACCTTCAGGAAGAAGGAGAAGCTAGATCTAGATGCCCATGCCCTTGAAGCAGAAGCCGTATCTGCAGGGCTGGGTGCTGCGGACCTCGGTTCCAGGAAGGATGGAAAGAGGCAGGCCACTAGAGAGGAGCAAGAAAGATTAGAAGCTGAGAAGAGAAATAGTGCATACCAGTTAGCTAAAGATAAAGCAAATGAGGCATCTAAAGCATTGCGACAGGACACTCAATCTGTTAAGGCAGAGGAAGATGAAACTCCTTACTTTGCTGATGATTATGATGAAATTGATAAAGCCTTGGAGAGATCAACGAAAATAGCTCTACAAAAGAAACAGGAGGAGAAAATCTCCGGTCCAAAGGCAATTGCTCGCCTTGCCACAGCAGCTGCAAGCAGCACAACTGCAAATGATCAATTCTCGTCAACTGGACAGTCACAGGAAAACAAGGTTGTGTTCACAGAGATGGAAGAATTTGTCTTGGGCCTACAGCTTGAAGAAGAATCCCACAAACCTGAAAGTGAAGATGTGTTTATGCAAGAAGATGAAGAACCAAAAGCTTCTGTAGACGTAGAAATGGGCGAGCCTAGTGCATGGACTGAAGTTAATGAAATTGAAGAGAACAAAGCACAATCTGCTGCTGATGATAATGAGGAAATAGTTCCAGATGAAACTATCCATGAAGTTGCAGTTGGGAAAGGTTTATCAGGTGTGCTAAAACTGCTTAAAGAGCGAGGTAATCTCAAAGAAGGTATTGAATGGGGTGGCAGGAACATGGACAAGAAGAAAAGCAAACTTTTAGGCATCGTAGATGATGACGAGGAGCCAAAGGAGACCCATACAGTGCGTCGGAGAAAGGATGAACAAAAGGATACTCGTTTGTCAGGCCATCAAAAGGAGATGCGTCCTCCTAAAGTCTATCAGGAAAAGGATATTCACATTGGGAGAACTGACGAATTTGGTCGAACTTTGACACCAAAGGAAGCCTTTCGGGGACTTTCACATAAATTTCATGGGAAGGGGCCTGGAAAAATGAAGCAAGAAAAGCGCATGAAGCAATACCACGAAGAACTCAAGTTGAAGCAGATGAAGAGTTCAGATACACCATCCCTGTCTGTGGAGAGGATGAGGGAAACTCAAGCTCGGTTACAGACACCCTATCTTGTTCTCAGCGGCCATGTTAAACCAGGGTATGCATTATTCAATTTATTTCATTTCACTGTTTCGTTTGACGTTTGGAGCTACTGTTGTGGACCTTTTTATGATGACTGGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000387 GO:0000398 GO:0000481 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008380 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009933 GO:0009965 GO:0009987 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010467 GO:0010588 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0022622 GO:0030532 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0046540 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048528 GO:0048532 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0061458 GO:0065003 GO:0070013 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0090567 GO:0090696 GO:0090698 GO:0097525 GO:0097526 GO:0099402 GO:0120114 GO:1901360 GO:1905392 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SART-1

Protein Analysis

927

Amino Acids

107.43

Weight (kDa)

5.51

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SART-1	PF03343	296 - 859	2.6e-69	SART-1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16780 AT5G16780 AT5G16780
fragaria_vesca	FvH4_4g15641 FvH4_4g15641 FvH4_4g15641 FvH4_4g15641
malus_domestica	MD13G1193700.v1.1 MD16G1194300.v1.1
prunus_persica	Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1 Prupe.1G014100_v2.0.a1
pyrus_communis	pycom13g16590 pycom16g16410
rosa_chinensis	RchiOBHm_Chr1g0362521 RchiOBHm_Chr4g0416151 RchiOBHm_Chr4g0416161
rosa_laevigata	RLG00000008010
rosa_multiflora	Rmu_co8134734.1_g000001 Rmu_sc0031164.1_g000005 Rmu_sc0034372.1_g000002 Rmu_sc0035291.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360010
rosa_rugosa	Rorug04G0139200 Rorug04G0139300 Rorug04G0139300
rosa_samantha	Rh4AG201400 Rh4BG198700 Rh4BG198900 Rh4CG212600 Rh4CG212700 Rh4CG214400 Rh4DG198800
rosa_wichuraiana	Rw4G017030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	2073
AccII	CGCG	1 cut(s)	1106
AciI	CCGC	4 cut(s)	70, 1106, 1595, 2679
AclWI	GGATC	5 cut(s)	261, 390, 1134, 1265, 1304
AcoI	YGGCCR	1 cut(s)	2680
AcsI	RAATTY	5 cut(s)	82, 1290, 1979, 2462, 2513
AcuI	CTGAAG	4 cut(s)	903, 1449, 1504, 2127
AfiI	CCNNNNNNNGG	2 cut(s)	2401, 2623
AflIII	ACRYGT	1 cut(s)	1440
AgsI	TTSAA	9 cut(s)	559, 975, 1382, 1562, 2003, 2123, 2264, 2587, 2710
AjnI	CCWGG	3 cut(s)	1607, 2530, 2692
AjuI	GAANNNNNNNTTGG	2 cut(s)	2181, 2213
Alw21I	GWGCWC	1 cut(s)	814
Alw26I	GTCTC	3 cut(s)	423, 633, 2333
AlwI	GGATC	5 cut(s)	261, 390, 1134, 1265, 1304
AlwNI	CAGNNNCTG	1 cut(s)	1895
Ama87I	CYCGRG	1 cut(s)	929
AoxI	GGCC	5 cut(s)	1629, 1990, 2392, 2528, 2680
ApoI	RAATTY	5 cut(s)	82, 1290, 1979, 2462, 2513
AseI	ATTAAT	1 cut(s)	1155
Asp700I	GAANNNNTTC	4 cut(s)	888, 1517, 2166, 2493
AspLEI	GCGC	2 cut(s)	1106, 2556
AspS9I	GGNCC	5 cut(s)	1597, 1862, 1990, 2528, 2759
AsuC2I	CCSGG	1 cut(s)	179
AsuHPI	GGTGA	6 cut(s)	70, 215, 337, 428, 1160, 1205
AvaI	CYCGRG	1 cut(s)	929
AvaII	GGWCC	3 cut(s)	1597, 1862, 2759
AxyI	CCTNAGG	1 cut(s)	894
BbsI	GAAGAC	1 cut(s)	891
Bbv12I	GWGCWC	1 cut(s)	814
BccI	CCATC	8 cut(s)	71, 407, 1087, 1139, 1610, 1966, 2403, 2620
BceAI	ACGGC	1 cut(s)	1556
BcgI	CGANNNNNNTGC	4 cut(s)	515, 549, 2078, 2112
BciT130I	CCWGG	3 cut(s)	1609, 2532, 2694
BciVI	GTATCC	2 cut(s)	556, 2371
BclI	TGATCA	1 cut(s)	1918
BcnI	CCSGG	1 cut(s)	179
BcoDI	GTCTC	3 cut(s)	423, 633, 2333
BfaI	CTAG	7 cut(s)	1055, 1139, 1337, 1538, 1544, 1635, 2094
BfmI	CTRYAG	5 cut(s)	1317, 1400, 1578, 1994, 2070
BfuI	GTATCC	2 cut(s)	556, 2371
BglII	AGATCT	3 cut(s)	978, 1432, 1540
BlpI	GCTNAGC	1 cut(s)	708
Bme1390I	CCNGG	4 cut(s)	179, 1609, 2532, 2694
Bme18I	GGWCC	3 cut(s)	1597, 1862, 2759
BmeT110I	CYCGRG	1 cut(s)	929
BmgT120I	GGNCC	5 cut(s)	1597, 1862, 1990, 2528, 2759
BmiI	GGNNCC	3 cut(s)	1606, 2331, 2529
BmrFI	CCNGG	4 cut(s)	179, 1609, 2532, 2694
BmsI	GCATC	8 cut(s)	655, 833, 852, 1330, 1537, 1721, 2319, 2397
BpiI	GAAGAC	1 cut(s)	891
BplI	GAGNNNNNCTC	6 cut(s)	1841, 1873, 2232, 2264, 2626, 2658
Bpu10I	CCTNAGC	1 cut(s)	1035
Bpu1102I	GCTNAGC	1 cut(s)	708
BpuEI	CTTGAG	5 cut(s)	854, 1106, 1196, 2564, 2628
BpuMI	CCSGG	1 cut(s)	179
BsaAI	YACGTR	1 cut(s)	1391
BsaBI	GATNNNNATC	1 cut(s)	342
BsaI	GGTCTC	1 cut(s)	2333
BsaJI	CCNNGG	5 cut(s)	145, 792, 1600, 1806, 2693
BsaWI	WCCGGW	2 cut(s)	55, 1859
BsaXI	ACNNNNNCTCC	6 cut(s)	184, 214, 926, 956, 2737, 2767
Bsc4I	CCNNNNNNNGG	2 cut(s)	2401, 2623
Bse1I	ACTGG	4 cut(s)	1363, 1684, 1939, 2780
Bse21I	CCTNAGG	1 cut(s)	894
Bse3DI	GCAATG	1 cut(s)	1721
Bse8I	GATNNNNATC	1 cut(s)	342
BseBI	CCWGG	3 cut(s)	1609, 2532, 2694
BseDI	CCNNGG	5 cut(s)	145, 792, 1600, 1806, 2693
BseJI	GATNNNNATC	1 cut(s)	342
BseLI	CCNNNNNNNGG	2 cut(s)	2401, 2623
BseMI	GCAATG	1 cut(s)	1721
BseMII	CTCAG	4 cut(s)	885, 1049, 1653, 2689
BseNI	ACTGG	4 cut(s)	1363, 1684, 1939, 2780
BseRI	GAGGAG	7 cut(s)	44, 205, 947, 1040, 1655, 1862, 2342
BseYI	CCCAGC	2 cut(s)	1058, 1585
Bsh1236I	CGCG	1 cut(s)	1106
BshFI	GGCC	5 cut(s)	1631, 1992, 2394, 2530, 2682
BsiHKAI	GWGCWC	1 cut(s)	814
BsiHKCI	CYCGRG	1 cut(s)	929
BsiSI	CCGG	3 cut(s)	56, 178, 1860
BslFI	GGGAC	3 cut(s)	497, 748, 2514
BslI	CCNNNNNNNGG	2 cut(s)	2401, 2623
BsmAI	GTCTC	3 cut(s)	423, 633, 2333
BsmFI	GGGAC	3 cut(s)	497, 748, 2514
BsnI	GGCC	5 cut(s)	1631, 1992, 2394, 2530, 2682
Bso31I	GGTCTC	1 cut(s)	2333
BsoBI	CYCGRG	1 cut(s)	929
Bsp1286I	GDGCHC	1 cut(s)	814
Bsp1720I	GCTNAGC	1 cut(s)	708
BspACI	CCGC	4 cut(s)	70, 1106, 1595, 2679
BspANI	GGCC	5 cut(s)	1631, 1992, 2394, 2530, 2682
BspCNI	CTCAG	4 cut(s)	886, 1048, 1654, 2688
BspFNI	CGCG	1 cut(s)	1106
BspLI	GGNNCC	3 cut(s)	1606, 2331, 2529
BspMAI	CTGCAG	2 cut(s)	1321, 1582
BspPI	GGATC	5 cut(s)	261, 390, 1134, 1265, 1304
BspQI	GCTCTTC	1 cut(s)	1377
BspTNI	GGTCTC	1 cut(s)	2333
BsrDI	GCAATG	1 cut(s)	1721
BsrI	ACTGG	4 cut(s)	1363, 1684, 1939, 2780
BssECI	CCNNGG	5 cut(s)	145, 792, 1600, 1806, 2693
BssT1I	CCWWGG	1 cut(s)	1806
Bst2UI	CCWGG	3 cut(s)	1609, 2532, 2694
Bst4CI	ACNGT	5 cut(s)	1100, 1941, 2350, 2728, 2753
Bst6I	CTCTTC	8 cut(s)	93, 131, 147, 855, 1377, 1661, 2118, 2591
BstAPI	GCANNNNNTGC	1 cut(s)	2141
BstBAI	YACGTR	1 cut(s)	1391
BstC8I	GCNNGC	5 cut(s)	113, 1629, 1879, 1900, 2090
BstDEI	CTNAG	6 cut(s)	264, 708, 894, 1035, 1662, 2675
BstFNI	CGCG	1 cut(s)	1106
BstHHI	GCGC	2 cut(s)	1106, 2556
BstMAI	GTCTC	3 cut(s)	423, 633, 2333
BstNI	CCWGG	3 cut(s)	1609, 2532, 2694
BstNSI	RCATGY	1 cut(s)	1444
BstSCI	CCNGG	4 cut(s)	177, 1607, 2530, 2692
BstSFI	CTRYAG	5 cut(s)	1317, 1400, 1578, 1994, 2070
BstSNI	TACGTA	1 cut(s)	1391
BstUI	CGCG	1 cut(s)	1106
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	3 cut(s)	978, 1432, 1540
BstYI	RGATCY	3 cut(s)	978, 1432, 1540
Bsu36I	CCTNAGG	1 cut(s)	894
BsuI	GTATCC	2 cut(s)	556, 2371
BsuRI	GGCC	5 cut(s)	1631, 1992, 2394, 2530, 2682
BtsIMutI	CAGTG	2 cut(s)	2355, 2724
Cac8I	GCNNGC	5 cut(s)	113, 1629, 1879, 1900, 2090
CaiI	CAGNNNCTG	1 cut(s)	1895
CfoI	GCGC	2 cut(s)	1106, 2556
Cfr13I	GGNCC	5 cut(s)	1597, 1862, 1990, 2528, 2759
CseI	GACGC	3 cut(s)	1223, 2342, 2399
DdeI	CTNAG	6 cut(s)	264, 708, 894, 1035, 1662, 2675
DraI	TTTAAA	1 cut(s)	1495
EaeI	YGGCCR	1 cut(s)	2680
Eam1104I	CTCTTC	8 cut(s)	93, 131, 147, 855, 1377, 1661, 2118, 2591
EarI	CTCTTC	8 cut(s)	93, 131, 147, 855, 1377, 1661, 2118, 2591
Eco105I	TACGTA	1 cut(s)	1391
Eco130I	CCWWGG	1 cut(s)	1806
Eco31I	GGTCTC	1 cut(s)	2333
Eco47I	GGWCC	3 cut(s)	1597, 1862, 2759
Eco57I	CTGAAG	4 cut(s)	903, 1449, 1504, 2127
Eco81I	CCTNAGG	1 cut(s)	894
Eco88I	CYCGRG	1 cut(s)	929
EcoO109I	RGGNCCY	1 cut(s)	2528
EcoRI	GAATTC	1 cut(s)	82
EcoRII	CCWGG	3 cut(s)	1607, 2530, 2692
EcoT14I	CCWWGG	1 cut(s)	1806
EcoT22I	ATGCAT	1 cut(s)	2704
ErhI	CCWWGG	1 cut(s)	1806
FalI	AAGNNNNNCTT	4 cut(s)	1502, 1534, 2477, 2509
FaqI	GGGAC	3 cut(s)	497, 748, 2514
FauI	CCCGC	1 cut(s)	63
FbaI	TGATCA	1 cut(s)	1918
FblI	GTMKAC	1 cut(s)	2073
FspBI	CTAG	7 cut(s)	1055, 1139, 1337, 1538, 1544, 1635, 2094
GlaI	GCGC	2 cut(s)	1105, 2555
GsaI	CCCAGC	2 cut(s)	1062, 1589
HaeIII	GGCC	5 cut(s)	1631, 1992, 2394, 2530, 2682
HapII	CCGG	3 cut(s)	56, 178, 1860
HgaI	GACGC	3 cut(s)	1223, 2342, 2399
HhaI	GCGC	2 cut(s)	1106, 2556
Hin6I	GCGC	2 cut(s)	1104, 2554
HinP1I	GCGC	2 cut(s)	1104, 2554
HincII	GTYRAC	1 cut(s)	1932
HindII	GTYRAC	1 cut(s)	1932
HindIII	AAGCTT	5 cut(s)	553, 710, 960, 1351, 2064
HinfI	GANTC	6 cut(s)	50, 233, 674, 919, 1045, 2009
HpaII	CCGG	3 cut(s)	56, 178, 1860
HphI	GGTGA	6 cut(s)	70, 215, 337, 428, 1160, 1205
Hpy166II	GTNNAC	4 cut(s)	1932, 1965, 2074, 2759
Hpy188I	TCNGA	7 cut(s)	88, 829, 1131, 1429, 1462, 2358, 2605
Hpy8I	GTNNAC	4 cut(s)	1932, 1965, 2074, 2759
Hpy99I	CGWCG	1 cut(s)	2358
HpyCH4III	ACNGT	5 cut(s)	1100, 1941, 2350, 2728, 2753
HpyCH4IV	ACGT	3 cut(s)	1390, 2076, 2739
HpyF3I	CTNAG	6 cut(s)	264, 708, 894, 1035, 1662, 2675
HpySE526I	ACGT	3 cut(s)	1390, 2076, 2739
HspAI	GCGC	2 cut(s)	1104, 2554
Ksp22I	TGATCA	1 cut(s)	1918
LguI	GCTCTTC	1 cut(s)	1377
LmnI	GCTCC	8 cut(s)	108, 120, 355, 809, 1186, 1642, 2329, 2745
LweI	GCATC	8 cut(s)	655, 833, 852, 1330, 1537, 1721, 2319, 2397
MaeI	CTAG	7 cut(s)	1055, 1139, 1337, 1538, 1544, 1635, 2094
MaeII	ACGT	3 cut(s)	1390, 2076, 2739
MaeIII	GTNAC	3 cut(s)	1148, 1941, 2652
MfeI	CAATTG	1 cut(s)	1872
MflI	RGATCY	3 cut(s)	978, 1432, 1540
MhlI	GDGCHC	1 cut(s)	814
MlyI	GAGTC	4 cut(s)	44, 683, 928, 1039
MmeI	TCCRAC	1 cut(s)	2336
Mph1103I	ATGCAT	1 cut(s)	2704
MroXI	GAANNNNTTC	4 cut(s)	888, 1517, 2166, 2493
MslI	CAYNNNNRTG	1 cut(s)	1970
MspA1I	CMGCKG	3 cut(s)	70, 1895, 2679
MspI	CCGG	3 cut(s)	56, 178, 1860
MspR9I	CCNGG	4 cut(s)	179, 1609, 2532, 2694
MunI	CAATTG	1 cut(s)	1872
MvaI	CCWGG	3 cut(s)	1609, 2532, 2694
MvnI	CGCG	1 cut(s)	1106
NciI	CCSGG	1 cut(s)	179
NlaIV	GGNNCC	3 cut(s)	1606, 2331, 2529
NmeAIII	GCCGAG	2 cut(s)	170, 817
NmuCI	GTSAC	2 cut(s)	1148, 1941
NsiI	ATGCAT	1 cut(s)	2704
NspI	RCATGY	1 cut(s)	1444
PaeR7I	CTCGAG	1 cut(s)	929
PciI	ACATGT	1 cut(s)	1440
PciSI	GCTCTTC	1 cut(s)	1377
PdmI	GAANNNNTTC	4 cut(s)	888, 1517, 2166, 2493
PfeI	GAWTC	2 cut(s)	233, 2009
PfoI	TCCNGGA	1 cut(s)	1607
PleI	GAGTC	4 cut(s)	44, 682, 927, 1039
PpsI	GAGTC	4 cut(s)	44, 682, 927, 1039
Ppu21I	YACGTR	1 cut(s)	1391
PscI	ACATGT	1 cut(s)	1440
PshBI	ATTAAT	1 cut(s)	1155
Psp6I	CCWGG	3 cut(s)	1607, 2530, 2692
PspFI	CCCAGC	2 cut(s)	1058, 1585
PspGI	CCWGG	3 cut(s)	1607, 2530, 2692
PspN4I	GGNNCC	3 cut(s)	1606, 2331, 2529
PspPI	GGNCC	5 cut(s)	1597, 1862, 1990, 2528, 2759
PspXI	VCTCGAGB	1 cut(s)	929
PstI	CTGCAG	2 cut(s)	1321, 1582
PstNI	CAGNNNCTG	1 cut(s)	1895
PsuI	RGATCY	3 cut(s)	978, 1432, 1540
PvuII	CAGCTG	1 cut(s)	1895
RseI	CAYNNNNRTG	1 cut(s)	1970
SapI	GCTCTTC	1 cut(s)	1377
Sau96I	GGNCC	5 cut(s)	1597, 1862, 1990, 2528, 2759
SchI	GAGTC	4 cut(s)	44, 683, 928, 1039
ScrFI	CCNGG	4 cut(s)	179, 1609, 2532, 2694
SduI	GDGCHC	1 cut(s)	814
SfaNI	GCATC	8 cut(s)	655, 833, 852, 1330, 1537, 1721, 2319, 2397
SfcI	CTRYAG	5 cut(s)	1317, 1400, 1578, 1994, 2070
Sfr274I	CTCGAG	1 cut(s)	929
SinI	GGWCC	3 cut(s)	1597, 1862, 2759
SlaI	CTCGAG	1 cut(s)	929
SmiMI	CAYNNNNRTG	1 cut(s)	1970
SmlI	CTYRAG	6 cut(s)	833, 929, 1121, 1175, 2579, 2643
SmoI	CTYRAG	6 cut(s)	833, 929, 1121, 1175, 2579, 2643
SnaBI	TACGTA	1 cut(s)	1391
SsiI	CCGC	4 cut(s)	70, 1106, 1595, 2679
SspMI	CTAG	7 cut(s)	1055, 1139, 1337, 1538, 1544, 1635, 2094
StyD4I	CCNGG	4 cut(s)	177, 1607, 2530, 2692
StyI	CCWWGG	1 cut(s)	1806
TaaI	ACNGT	5 cut(s)	1100, 1941, 2350, 2728, 2753
TaiI	ACGT	3 cut(s)	1393, 2079, 2742
TaqI	TCGA	8 cut(s)	43, 188, 346, 385, 535, 677, 930, 2470
TauI	GCSGC	1 cut(s)	2682
TfiI	GAWTC	2 cut(s)	233, 2009
TscAI	CASTG	2 cut(s)	2355, 2731
TseFI	GTSAC	2 cut(s)	1148, 1941
Tsp45I	GTSAC	2 cut(s)	1148, 1941
TspRI	CASTG	2 cut(s)	2355, 2731
VpaK11BI	GGWCC	3 cut(s)	1597, 1862, 2759
VspI	ATTAAT	1 cut(s)	1155
XapI	RAATTY	5 cut(s)	82, 1290, 1979, 2462, 2513
XbaI	TCTAGA	1 cut(s)	1543
XceI	RCATGY	1 cut(s)	1444
XhoI	CTCGAG	1 cut(s)	929
XmiI	GTMKAC	1 cut(s)	2073
XmnI	GAANNNNTTC	4 cut(s)	888, 1517, 2166, 2493
XspI	CTAG	7 cut(s)	1055, 1139, 1337, 1538, 1544, 1635, 2094
Zsp2I	ATGCAT	1 cut(s)	2704

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.