pycom13g19000
ERF Family

Transducin WD40 repeat-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0007851
Physical Location & Seq
Forward (+)
15024951 .. 15028702
3752 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2901 bp
ATGTCGGCCTCATCGGCTCCCCGCCTCAAAGACCGCGGCGGCGCTGGCTCCGTCGCAGGGTCCAAAGCCGCTGCCACTCTCAAACCATCCAAGCCCCTCACGCCGGTACCCTTTTCCGACAAGAGGTACTCCAGCGTCGGAAAAGAGAACTCTCTTTCTGGGACCGCCGCTTTCCGGACCTCGGCCGAGAAGCCCACGATCCGGCCCGTTTCACGTGTTGACAAGGCGTCTGTGTCTGTGGCAACCAGAGACCGCGGCGGCGAAACGCGTGCACGGTGGTCCATGCCGTTGGCGCCGAGAGGTAGGAGCTCTAGTCCTTCTGAGTTTACAAGGGTCCTTTGTCATACGGGTAAGGAGCGGAGGGTCTCGGTGGGTCGGGCCAGACCGGGTTCGGGTCTGAGTTCGGTGGGGGAGAGCGATCGAGTGGTGGCGAGTGCAGGGAAGGCTCTGAGTAATGTTAGGGGATCAGCGAGTGGGAAGCAGAGAAAGGGATTTAGGGATTTGGATGTGAAGAAGAGTGAAGTGGGGGCGAATGGGATTAAGGTTTTGAGGGATGTCAAAGAAATTGGTAAAGTTGATGTGAATTTAGAGAAAAGGAATGCAACTTCTGGAGAATTAGAAGTGAAAGGGGTGGGAATTGAGAAAAATTGGGATGGAGTTAGGGTTTCGGGAAGTGGTGGTGGAGTGTGTAAACTTACCTCCGAATTGAAAAACCCAAATGGGGTTGATAAAAAGGATCGAAATTTGGTGAGGGTTGATGATAAGGCTGTGAAATTTGGGAGTGGTGCTGTTTTGGGACTGAAGGAGTCTGGTGAAAAATCTGTGAGTAATGCAAAGGTTTTGGAGGGTTTGAAAGAAAAGAGGCTGAGTGAAGAAGGGCGTAGTGGCAGTCGTTCGGGTATCAAATATCCAAGTAAGCTTCATGAGAAGCTCGCTTTCTTGGAAGGGAAGGTTAAGAGGATTTCCTCGGATATTAAGAAGACAAGGGAGATTCTGGATATGAATACTACAGATACGTCGAAGGTGATACTCTCCGATATTCAGGAAAAGATTTCCGGGATTGAGAAGGCCATGGGACATGTCAATGATTCAAGTGGTAAGATTGGGTTGCCGAAAAGTTCTGAGCATAATGACCGAGATGCCAAAGTAGTTGAGAAGGGCCATATTGAGCCGGTGAGTAATGCTAAGAGTTTTGTAGAACGGTTGAACAGTGAAGACTTGGAAGCTAGGCTCTTTCCTCATCACAAGCTGCTTAAAAACCGTACGGCATTGAAAGGATCATCACAAAGCTCTCAAAGTCATGGGTCCCAAGCTGTTGAAACCAGTTGTGAAGCAAACGTTGAAGAGAAGTCATTGAGCCTTATAGATGATAACCTAATTGCAGTAGAGTTCTTGGCTTCGTTGGACCAAACTAAAGTTTCAACAAGGGATGATGGATGTGAAGATTTGAAATGTTTTGAAGTTCAAGAAGTGGATGGTGTCAATGCTGCAGAAGTTGAAAAATCTTCAAAATTTGTCACTGGCAAGCCGACTTTGGAGCTCATTCTCACAACTGATGAAACACTTGATGAGTTGGATGATCAGGAGAATATACAGGAAACGATCATGGATGAGGAAACTGAGGATACCTGCATTTACCAGCTGAACCAAATAGGCCAAAAAACCTCAACTGGCGGGTGGTTTGTGTCCGAAGGAGAGTCGGTTCTTCTTGCTCATGATGACAGTTCATGCACCTTCTATGATATTGTAAACTGTGAGGAGAAGGTTGTGTATAAACCTCCTGGTGGAGTTTCACCTAATATGTGGAGAGACTGTTGGATAATCCGTGCTCCCAGTGCTGATGGTTGCTCAGGAAAGTACGTTGTGGCTGCATCTGCTGGAAATACAATGGATTCAGGGTTTTGTTCATGGGATTTCTATGCCAAAGATGTGCGTGCTTTCCGGATTGAGGACTGTTCAGCTCCTTCAAGAACAGTGCTTGGTCCCTTACCTAACAGCATTTCATATGGAAGAAATGCTTTGTCTGATCTTCTGGATCCAGAACCTAGACAATGGTGGTATAAACCTTGTGGACCTCTCATTGTCTCGACTGCTAGTTGTCAGAGAGTTGTGAGTATTTATGACATCCGTGATGGCGAACAAGTTATGAAATGGGATGTATCGAAGCCTGTTATAGCAATGGATAATTCAAGTCCCTTGCAGTGGAGAAATAGAGGAAAAGTTGTTGTAGCTGAAGCTGAAACAATTTCCTTTTGGGATGTGAACTCTCTTAACTCTCAGGCTTTACTATCTGTTTCTACTTCTGGTCGGAAAATTTCTGCTCTTCACGTGAATAACACTGATGCTGAACTAGGTGGTGGCGTTCGACAAAGGGTAAGTTCTTCTGAGGCAGAAGGAAATGATGGAGTGTTTTGTACCCAAGATTCTATTAACATTATAGACTTTCGGCATCCTACTGGCGTAGGTCTTAAGATACCAAAACTCGGTGTCAATGTGCAATCAGTTTTCTCCCGTGGGGATTCTGTCTTCCTTGGCTGCCCTAGTGCAAGATTGGGATGGAAAAAACAGTCCTCTTCACAGGTTCAGCAATTCTCAATCCGACAACAAAGGCTATACAGCACTTACGCTTTGCCAGAATCAAATGCTCACAGCCATTACACAGAAATTACGCAAGTTTGGGGGAATTCCAACCTTGTCATGGGTGTTTGTGGATTGGGGCTGTTTGTATTTGATGCGTTGAAGGATGACGGAGTTCCATTGTTGACCAGTGATGATGGGACTCATAAAGCCAGAGAAACTGTTGGTCCAGATGACTTGTACGCTCCTTCTTTTGATTACTTGGGTTCTCGGGCACTTCTCATCTCAAGAGATCGCCCAGCACTGTGGAGGCACTTACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

967

Amino Acids

104.82

Weight (kDa)

7.97

Isoelectric Point (pI)

39.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_At4g14310 PF25465 680 - 961 2.1e-155 At4g14310 8-bladed propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1637
Acc65I GGTACC 1 cut(s) 106
AccB1I GGYRCC 2 cut(s) 106, 292
AccBSI CCGCTC 1 cut(s) 358
AccII CGCG 3 cut(s) 36, 255, 268
AccIII TCCGGA 2 cut(s) 174, 1941
AclI AACGTT 1 cut(s) 1338
AclWI GGATC 6 cut(s) 193, 472, 744, 1285, 2030, 2043
AcoI YGGCCR 1 cut(s) 183
AcsI RAATTY 6 cut(s) 583, 742, 773, 1511, 2313, 2683
AcuI CTGAAG 2 cut(s) 821, 2253
AcvI CACGTG 2 cut(s) 215, 2329
AcyI GRCGYC 2 cut(s) 227, 293
AfaI GTAC 6 cut(s) 108, 128, 1264, 1859, 2416, 2819
AflII CTTAAG 1 cut(s) 2468
AflIII ACRYGT 3 cut(s) 214, 266, 1078
AhdI GACNNNNNGTC 1 cut(s) 226
AjnI CCWGG 1 cut(s) 1780
AloI GAACNNNNNNTCC 2 cut(s) 1686, 1718
Alw21I GWGCWC 4 cut(s) 274, 311, 1542, 1831
Alw26I GTCTC 4 cut(s) 243, 370, 1803, 2089
Alw44I GTGCAC 1 cut(s) 270
AlwI GGATC 6 cut(s) 193, 472, 744, 1285, 2030, 2043
Ama87I CYCGRG 1 cut(s) 2847
Aor13HI TCCGGA 2 cut(s) 174, 1941
AoxI GGCC 7 cut(s) 6, 183, 203, 378, 1068, 1159, 1654
ApaLI GTGCAC 1 cut(s) 270
ApeKI GCWGC 5 cut(s) 71, 1249, 1487, 1868, 2535
ApoI RAATTY 6 cut(s) 583, 742, 773, 1511, 2313, 2683
Asp718I GGTACC 1 cut(s) 106
AspLEI GCGC 2 cut(s) 44, 295
AsuC2I CCSGG 2 cut(s) 387, 1057
AsuHPI GGTGA 5 cut(s) 760, 824, 1036, 1186, 1785
AvaI CYCGRG 1 cut(s) 2847
BaeGI GKGCMC 2 cut(s) 274, 2854
BaeI ACNNNNGTAYC 2 cut(s) 90, 123
BamHI GGATCC 1 cut(s) 2035
BanI GGYRCC 2 cut(s) 106, 292
BanII GRGCYC 2 cut(s) 311, 1542
BbrPI CACGTG 2 cut(s) 215, 2329
BbsI GAAGAC 3 cut(s) 986, 1221, 2518
Bbv12I GWGCWC 4 cut(s) 274, 311, 1542, 1831
BbvI GCAGC 5 cut(s) 58, 1236, 1474, 1855, 2522
BccI CCATC 9 cut(s) 94, 647, 1427, 1469, 1835, 2126, 2396, 2550, 2768
BceAI ACGGC 2 cut(s) 271, 1281
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BciT130I CCWGG 1 cut(s) 1782
BciVI GTATCC 1 cut(s) 1618
BclI TGATCA 1 cut(s) 1579
BcnI CCSGG 2 cut(s) 387, 1057
BcoDI GTCTC 4 cut(s) 243, 370, 1803, 2089
BfaI CTAG 6 cut(s) 312, 1227, 2046, 2094, 2351, 2541
BfmI CTRYAG 2 cut(s) 1008, 1488
BfoI RGCGCY 2 cut(s) 45, 296
BfrI CTTAAG 1 cut(s) 2468
BfuAI ACCTGC 1 cut(s) 1637
BfuI GTATCC 1 cut(s) 1618
BglI GCCNNNNNGGC 1 cut(s) 14
Bme1390I CCNGG 3 cut(s) 387, 1057, 1782
BmeRI GACNNNNNGTC 1 cut(s) 226
BmeT110I CYCGRG 1 cut(s) 2847
BmrFI CCNGG 3 cut(s) 387, 1057, 1782
BmrI ACTGGG 1 cut(s) 1827
BmsI GCATC 5 cut(s) 1129, 1880, 2332, 2458, 2722
BmuI ACTGGG 1 cut(s) 1827
BpiI GAAGAC 3 cut(s) 986, 1221, 2518
BpmI CTGGAG 2 cut(s) 115, 630
Bpu10I CCTNAGC 1 cut(s) 1849
BpuEI CTTGAG 1 cut(s) 2848
BpuMI CCSGG 2 cut(s) 387, 1057
BsaAI YACGTR 2 cut(s) 215, 2329
BsaHI GRCGYC 2 cut(s) 227, 293
BsaI GGTCTC 2 cut(s) 243, 370
BsaJI CCNNGG 7 cut(s) 34, 180, 253, 966, 1071, 2512, 2530
BsaWI WCCGGW 2 cut(s) 174, 1941
BsaXI ACNNNNNCTCC 8 cut(s) 298, 328, 648, 678, 1686, 1716, 1798, 1828
Bse118I RCCGGY 2 cut(s) 103, 1171
Bse1I ACTGG 6 cut(s) 1323, 1525, 1675, 1833, 2461, 2766
Bse3DI GCAATG 1 cut(s) 2184
BseAI TCCGGA 2 cut(s) 174, 1941
BseBI CCWGG 1 cut(s) 1782
BseDI CCNNGG 7 cut(s) 34, 180, 253, 966, 1071, 2512, 2530
BseMI GCAATG 1 cut(s) 2184
BseMII CTCAG 9 cut(s) 312, 389, 440, 857, 1113, 1611, 1863, 2291, 2376
BseNI ACTGG 6 cut(s) 1323, 1525, 1675, 1833, 2461, 2766
BseRI GAGGAG 1 cut(s) 1772
BseSI GKGCMC 2 cut(s) 274, 2854
BseX3I CGGCCG 1 cut(s) 183
BseXI GCAGC 5 cut(s) 58, 1236, 1474, 1855, 2522
BseYI CCCAGC 1 cut(s) 2875
BsgI GTGCAG 1 cut(s) 456
Bsh1236I CGCG 3 cut(s) 36, 255, 268
Bsh1285I CGRYCG 2 cut(s) 186, 421
BshFI GGCC 7 cut(s) 8, 185, 205, 380, 1070, 1161, 1656
BshNI GGYRCC 2 cut(s) 106, 292
BsiEI CGRYCG 2 cut(s) 186, 421
BsiHKAI GWGCWC 4 cut(s) 274, 311, 1542, 1831
BsiHKCI CYCGRG 1 cut(s) 2847
BsiSI CCGG 7 cut(s) 104, 175, 202, 386, 1056, 1172, 1942
BsiWI CGTACG 1 cut(s) 1262
BslFI GGGAC 7 cut(s) 175, 810, 1089, 1291, 1968, 2178, 2791
BsmAI GTCTC 4 cut(s) 243, 370, 1803, 2089
BsmFI GGGAC 7 cut(s) 175, 810, 1089, 1291, 1968, 2178, 2791
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 7 cut(s) 8, 185, 205, 380, 1070, 1161, 1656
Bso31I GGTCTC 2 cut(s) 243, 370
BsoBI CYCGRG 1 cut(s) 2847
Bsp1286I GDGCHC 5 cut(s) 274, 311, 1542, 1831, 2854
Bsp13I TCCGGA 2 cut(s) 174, 1941
Bsp19I CCATGG 1 cut(s) 1071
BspANI GGCC 7 cut(s) 8, 185, 205, 380, 1070, 1161, 1656
BspCNI CTCAG 9 cut(s) 313, 390, 441, 858, 1114, 1612, 1862, 2290, 2377
BspEI TCCGGA 2 cut(s) 174, 1941
BspFNI CGCG 3 cut(s) 36, 255, 268
BspHI TCATGA 2 cut(s) 922, 1714
BspMAI CTGCAG 1 cut(s) 1492
BspMI ACCTGC 1 cut(s) 1637
BspPI GGATC 6 cut(s) 193, 472, 744, 1285, 2030, 2043
BspQI GCTCTTC 1 cut(s) 2328
BspT107I GGYRCC 2 cut(s) 106, 292
BspTI CTTAAG 1 cut(s) 2468
BspTNI GGTCTC 2 cut(s) 243, 370
BsrBI CCGCTC 1 cut(s) 358
BsrDI GCAATG 1 cut(s) 2184
BsrFI RCCGGY 2 cut(s) 103, 1171
BsrI ACTGG 6 cut(s) 1323, 1525, 1675, 1833, 2461, 2766
BssAI RCCGGY 2 cut(s) 103, 1171
BssECI CCNNGG 7 cut(s) 34, 180, 253, 966, 1071, 2512, 2530
BssNI GRCGYC 2 cut(s) 227, 293
BssT1I CCWWGG 2 cut(s) 1071, 2530
Bst2UI CCWGG 1 cut(s) 1782
Bst6I CTCTTC 4 cut(s) 509, 1338, 2328, 2578
BstACI GRCGYC 2 cut(s) 227, 293
BstAFI CTTAAG 1 cut(s) 2468
BstBAI YACGTR 2 cut(s) 215, 2329
BstC8I GCNNGC 5 cut(s) 46, 270, 933, 1526, 1935
BstDSI CCRYGG 4 cut(s) 34, 253, 1071, 2512
BstFNI CGCG 3 cut(s) 36, 255, 268
BstH2I RGCGCY 2 cut(s) 45, 296
BstHHI GCGC 2 cut(s) 44, 295
BstMAI GTCTC 4 cut(s) 243, 370, 1803, 2089
BstMCI CGRYCG 2 cut(s) 186, 421
BstMWI GCNNNNNNNGC 7 cut(s) 14, 45, 100, 292, 443, 1835, 1874
BstNI CCWGG 1 cut(s) 1782
BstNSI RCATGY 1 cut(s) 1082
BstSCI CCNGG 3 cut(s) 385, 1055, 1780
BstSFI CTRYAG 2 cut(s) 1008, 1488
BstSLI GKGCMC 2 cut(s) 274, 2854
BstUI CGCG 3 cut(s) 36, 255, 268
BstV1I GCAGC 5 cut(s) 58, 1236, 1474, 1855, 2522
BstV2I GAAGAC 3 cut(s) 986, 1221, 2518
BstX2I RGATCY 1 cut(s) 2035
BstXI CCANNNNNNTGG 2 cut(s) 289, 2883
BstYI RGATCY 1 cut(s) 2035
BstZI CGGCCG 1 cut(s) 183
BsuI GTATCC 1 cut(s) 1618
BsuRI GGCC 7 cut(s) 8, 185, 205, 380, 1070, 1161, 1656
BtgI CCRYGG 4 cut(s) 34, 253, 1071, 2512
BtsI GCAGTG 1 cut(s) 2207
BtsIMutI CAGTG 8 cut(s) 1216, 1518, 1840, 1980, 2207, 2337, 2773, 2879
BveI ACCTGC 1 cut(s) 1637
Cac8I GCNNGC 5 cut(s) 46, 270, 933, 1526, 1935
CciI TCATGA 2 cut(s) 922, 1714
CfoI GCGC 2 cut(s) 44, 295
Cfr10I RCCGGY 2 cut(s) 103, 1171
Cfr42I CCGCGG 2 cut(s) 37, 256
CseI GACGC 2 cut(s) 124, 216
Csp6I GTAC 6 cut(s) 107, 127, 1263, 1858, 2415, 2818
CviQI GTAC 6 cut(s) 107, 127, 1263, 1858, 2415, 2818
DinI GGCGCC 1 cut(s) 294
DriI GACNNNNNGTC 1 cut(s) 226
EaeI YGGCCR 1 cut(s) 183
EagI CGGCCG 1 cut(s) 183
Eam1104I CTCTTC 4 cut(s) 509, 1338, 2328, 2578
Eam1105I GACNNNNNGTC 1 cut(s) 226
EarI CTCTTC 4 cut(s) 509, 1338, 2328, 2578
Ecl136II GAGCTC 2 cut(s) 309, 1540
EclXI CGGCCG 1 cut(s) 183
Eco130I CCWWGG 2 cut(s) 1071, 2530
Eco24I GRGCYC 2 cut(s) 311, 1542
Eco31I GGTCTC 2 cut(s) 243, 370
Eco52I CGGCCG 1 cut(s) 183
Eco53kI GAGCTC 2 cut(s) 309, 1540
Eco57I CTGAAG 2 cut(s) 821, 2253
Eco72I CACGTG 2 cut(s) 215, 2329
Eco88I CYCGRG 1 cut(s) 2847
EcoICRI GAGCTC 2 cut(s) 309, 1540
EcoO109I RGGNCCY 2 cut(s) 334, 1305
EcoRI GAATTC 1 cut(s) 2683
EcoRII CCWGG 1 cut(s) 1780
EcoT14I CCWWGG 2 cut(s) 1071, 2530
EcoT38I GRGCYC 2 cut(s) 311, 1542
EgeI GGCGCC 1 cut(s) 294
EheI GGCGCC 1 cut(s) 294
ErhI CCWWGG 2 cut(s) 1071, 2530
FalI AAGNNNNNCTT 2 cut(s) 2002, 2034
FaqI GGGAC 7 cut(s) 175, 810, 1089, 1291, 1968, 2178, 2791
FauI CCCGC 2 cut(s) 29, 1667
FauNDI CATATG 1 cut(s) 2005
FbaI TGATCA 1 cut(s) 1579
FriOI GRGCYC 2 cut(s) 311, 1542
FspBI CTAG 6 cut(s) 312, 1227, 2046, 2094, 2351, 2541
GlaI GCGC 2 cut(s) 43, 294
GsaI CCCAGC 1 cut(s) 2879
GsuI CTGGAG 2 cut(s) 115, 630
HaeII RGCGCY 2 cut(s) 45, 296
HaeIII GGCC 7 cut(s) 8, 185, 205, 380, 1070, 1161, 1656
HapII CCGG 7 cut(s) 104, 175, 202, 386, 1056, 1172, 1942
HgaI GACGC 2 cut(s) 124, 216
HhaI GCGC 2 cut(s) 44, 295
Hin1I GRCGYC 2 cut(s) 227, 293
Hin6I GCGC 2 cut(s) 42, 293
HinP1I GCGC 2 cut(s) 42, 293
HincII GTYRAC 2 cut(s) 220, 2763
HindII GTYRAC 2 cut(s) 220, 2763
HindIII AAGCTT 1 cut(s) 917
HinfI GANTC 9 cut(s) 806, 991, 1088, 1697, 1892, 2423, 2519, 2636, 2779
HpaII CCGG 7 cut(s) 104, 175, 202, 386, 1056, 1172, 1942
HphI GGTGA 5 cut(s) 760, 824, 1036, 1186, 1785
Hpy166II GTNNAC 8 cut(s) 220, 272, 327, 692, 1750, 2072, 2263, 2763
Hpy8I GTNNAC 8 cut(s) 220, 272, 327, 692, 1750, 2072, 2263, 2763
Hpy99I CGWCG 3 cut(s) 56, 140, 1021
HpyCH4IV ACGT 5 cut(s) 214, 1016, 1338, 1860, 2328
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 45, 100, 292, 443, 1835, 1874
HpySE526I ACGT 5 cut(s) 214, 1016, 1338, 1860, 2328
Hsp92I GRCGYC 2 cut(s) 227, 293
HspAI GCGC 2 cut(s) 42, 293
KasI GGCGCC 1 cut(s) 292
KflI GGGWCCC 1 cut(s) 1305
Kpn2I TCCGGA 2 cut(s) 174, 1941
KpnI GGTACC 1 cut(s) 110
Ksp22I TGATCA 1 cut(s) 1579
KspI CCGCGG 2 cut(s) 37, 256
LguI GCTCTTC 1 cut(s) 2328
LmnI GCTCC 8 cut(s) 22, 53, 306, 355, 1537, 1834, 1966, 2827
Lsp1109I GCAGC 5 cut(s) 58, 1236, 1474, 1855, 2522
LweI GCATC 5 cut(s) 1129, 1880, 2332, 2458, 2722
MaeI CTAG 6 cut(s) 312, 1227, 2046, 2094, 2351, 2541
MaeII ACGT 5 cut(s) 214, 1016, 1338, 1860, 2328
MaeIII GTNAC 1 cut(s) 1516
MbiI CCGCTC 1 cut(s) 358
MflI RGATCY 1 cut(s) 2035
MhlI GDGCHC 5 cut(s) 274, 311, 1542, 1831, 2854
MluI ACGCGT 1 cut(s) 266
Mly113I GGCGCC 1 cut(s) 293
MlyI GAGTC 3 cut(s) 815, 1706, 2773
MmeI TCCRAC 8 cut(s) 118, 141, 1383, 1554, 1796, 2288, 2623, 2712
MroI TCCGGA 2 cut(s) 174, 1941
MseI TTAA 7 cut(s) 540, 954, 975, 1254, 2271, 2430, 2469
MslI CAYNNNNRTG 1 cut(s) 1083
MspA1I CMGCKG 4 cut(s) 36, 71, 255, 1642
MspCI CTTAAG 1 cut(s) 2468
MspI CCGG 7 cut(s) 104, 175, 202, 386, 1056, 1172, 1942
MspR9I CCNGG 3 cut(s) 387, 1057, 1782
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 1 cut(s) 1782
MvnI CGCG 3 cut(s) 36, 255, 268
MwoI GCNNNNNNNGC 7 cut(s) 14, 45, 100, 292, 443, 1835, 1874
NarI GGCGCC 1 cut(s) 293
NciI CCSGG 2 cut(s) 387, 1057
NcoI CCATGG 1 cut(s) 1071
NdeI CATATG 1 cut(s) 2005
NmeAIII GCCGAG 3 cut(s) 161, 211, 321
NmuCI GTSAC 1 cut(s) 1516
NspI RCATGY 1 cut(s) 1082
PagI TCATGA 2 cut(s) 922, 1714
PciI ACATGT 1 cut(s) 1078
PciSI GCTCTTC 1 cut(s) 2328
PctI GAATGC 1 cut(s) 604
PfeI GAWTC 6 cut(s) 991, 1088, 1892, 2423, 2519, 2636
Pfl23II CGTACG 1 cut(s) 1262
PfoI TCCNGGA 1 cut(s) 1055
Ple19I CGATCG 1 cut(s) 421
PleI GAGTC 3 cut(s) 814, 1705, 2773
PluTI GGCGCC 1 cut(s) 296
PmaCI CACGTG 2 cut(s) 215, 2329
PmlI CACGTG 2 cut(s) 215, 2329
PpsI GAGTC 3 cut(s) 814, 1705, 2773
Ppu21I YACGTR 2 cut(s) 215, 2329
PpuMI RGGWCCY 2 cut(s) 334, 1305
PscI ACATGT 1 cut(s) 1078
Psp124BI GAGCTC 2 cut(s) 311, 1542
Psp1406I AACGTT 1 cut(s) 1338
Psp5II RGGWCCY 2 cut(s) 334, 1305
Psp6I CCWGG 1 cut(s) 1780
PspCI CACGTG 2 cut(s) 215, 2329
PspFI CCCAGC 1 cut(s) 2875
PspGI CCWGG 1 cut(s) 1780
PspLI CGTACG 1 cut(s) 1262
PspPPI RGGWCCY 2 cut(s) 334, 1305
PstI CTGCAG 1 cut(s) 1492
PsuI RGATCY 1 cut(s) 2035
PvuI CGATCG 1 cut(s) 421
PvuII CAGCTG 1 cut(s) 1642
RsaI GTAC 6 cut(s) 108, 128, 1264, 1859, 2416, 2819
RsaNI GTAC 6 cut(s) 107, 127, 1263, 1858, 2415, 2818
RseI CAYNNNNRTG 1 cut(s) 1083
SacI GAGCTC 2 cut(s) 311, 1542
SacII CCGCGG 2 cut(s) 37, 256
SapI GCTCTTC 1 cut(s) 2328
SaqAI TTAA 7 cut(s) 540, 954, 975, 1254, 2271, 2430, 2469
SchI GAGTC 3 cut(s) 815, 1706, 2773
ScrFI CCNGG 3 cut(s) 387, 1057, 1782
SduI GDGCHC 5 cut(s) 274, 311, 1542, 1831, 2854
SfaNI GCATC 5 cut(s) 1129, 1880, 2332, 2458, 2722
SfcI CTRYAG 2 cut(s) 1008, 1488
SfoI GGCGCC 1 cut(s) 294
Sfr303I CCGCGG 2 cut(s) 37, 256
SgrBI CCGCGG 2 cut(s) 37, 256
SmiMI CAYNNNNRTG 1 cut(s) 1083
SmlI CTYRAG 2 cut(s) 2468, 2863
SmoI CTYRAG 2 cut(s) 2468, 2863
SspDI GGCGCC 1 cut(s) 292
SspMI CTAG 6 cut(s) 312, 1227, 2046, 2094, 2351, 2541
SstI GAGCTC 2 cut(s) 311, 1542
StyD4I CCNGG 3 cut(s) 385, 1055, 1780
StyI CCWWGG 2 cut(s) 1071, 2530
TaiI ACGT 5 cut(s) 217, 1019, 1341, 1863, 2331
TaqI TCGA 6 cut(s) 421, 739, 1019, 2087, 2162, 2365
TaqII GACCGA 1 cut(s) 1149
TauI GCSGC 6 cut(s) 39, 42, 71, 170, 258, 261
TfiI GAWTC 6 cut(s) 991, 1088, 1892, 2423, 2519, 2636
Tru1I TTAA 7 cut(s) 540, 954, 975, 1254, 2271, 2430, 2469
Tru9I TTAA 7 cut(s) 540, 954, 975, 1254, 2271, 2430, 2469
TscAI CASTG 8 cut(s) 1216, 1525, 1840, 1980, 2207, 2344, 2773, 2886
TseFI GTSAC 1 cut(s) 1516
TseI GCWGC 5 cut(s) 71, 1249, 1487, 1868, 2535
Tsp45I GTSAC 1 cut(s) 1516
TspDTI ATGAA 7 cut(s) 911, 1016, 1572, 1716, 1896, 1992, 2162
TspGWI ACGGA 4 cut(s) 40, 1814, 2117, 2763
TspRI CASTG 8 cut(s) 1216, 1525, 1840, 1980, 2207, 2344, 2773, 2886
Vha464I CTTAAG 1 cut(s) 2468
VneI GTGCAC 1 cut(s) 270
XapI RAATTY 6 cut(s) 583, 742, 773, 1511, 2313, 2683
XceI RCATGY 1 cut(s) 1082
XcmI CCANNNNNNNNNTGG 1 cut(s) 2695
XspI CTAG 6 cut(s) 312, 1227, 2046, 2094, 2351, 2541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.