pycom14g02060

Protein TERMINAL FLOWER 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
1600552 .. 1600779
228 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g02060.1

Sequence Viewer

Length: 228 bp
ATGGCAAGAGTCCCGGAGCCTCTAGTTGTTGGGAGAGTGATAGGAGATGTTCTTGATTCCTTCACTCCAACAACACACATGTCTGTCACTTACAACACCAAGCTAGTCTGCAATGGACTTGAGCTCTTTCCTTCTGTTGTCACAGCCAAACCTAGAGTTGAGATTCAAGGAGGGGAGTTGAGATCTTTCTTTACTTTGGTATATATTATTCTGTTATTAATGAATTGA

Protein Analysis

76

Amino Acids

8.31

Weight (kDa)

6.53

Isoelectric Point (pI)

36.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015811)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03840
fragaria_vesca FvH4_6g18480
malus_domestica MD12G1023900.v1.1 MD14G1021100.v1.1
prunus_persica Prupe.7G112600_v2.0.a1
pyrus_communis pycom14g02060
rosa_chinensis RchiOBHm_Chr3g0473021
rosa_laevigata RLG00000024037
rosa_multiflora Rmu_sc0010986.1_g000002
rosa_roxburghii Rroxscaffold_6G00408380
rosa_rugosa Rorug03G0130700
rosa_samantha Rh3AG182500 Rh3BG208800 Rh3CG205800
rosa_wichuraiana Rw3G016070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflIII ACRYGT 1 cut(s) 78
AgsI TTSAA 1 cut(s) 167
AluBI AGCT 2 cut(s) 103, 124
AluI AGCT 2 cut(s) 103, 124
Alw21I GWGCWC 1 cut(s) 126
AseI ATTAAT 1 cut(s) 218
AsuC2I CCSGG 1 cut(s) 14
BanII GRGCYC 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 126
BcnI CCSGG 1 cut(s) 14
BfaI CTAG 3 cut(s) 23, 104, 153
BglII AGATCT 1 cut(s) 182
Bme1390I CCNGG 1 cut(s) 14
BmiI GGNNCC 1 cut(s) 18
BmrFI CCNGG 1 cut(s) 14
BpuEI CTTGAG 1 cut(s) 140
BpuMI CCSGG 1 cut(s) 14
Bse3DI GCAATG 1 cut(s) 118
BseMI GCAATG 1 cut(s) 118
BsiHKAI GWGCWC 1 cut(s) 126
BsiSI CCGG 1 cut(s) 14
Bsp1286I GDGCHC 1 cut(s) 126
Bsp143I GATC 1 cut(s) 182
BspLI GGNNCC 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 118
BssMI GATC 1 cut(s) 182
BstKTI GATC 1 cut(s) 185
BstMBI GATC 1 cut(s) 182
BstNSI RCATGY 1 cut(s) 82
BstSCI CCNGG 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 182
BstYI RGATCY 1 cut(s) 182
CviAII CATG 1 cut(s) 79
CviJI RGCY 4 cut(s) 19, 103, 124, 146
CviKI_1 RGCY 4 cut(s) 19, 103, 124, 146
DpnI GATC 1 cut(s) 184
DpnII GATC 1 cut(s) 182
Ecl136II GAGCTC 1 cut(s) 124
Eco24I GRGCYC 1 cut(s) 126
Eco53kI GAGCTC 1 cut(s) 124
EcoICRI GAGCTC 1 cut(s) 124
EcoT38I GRGCYC 1 cut(s) 126
FaeI CATG 1 cut(s) 82
FaiI YATR 3 cut(s) 80, 202, 204
FatI CATG 1 cut(s) 78
FriOI GRGCYC 1 cut(s) 126
FspBI CTAG 3 cut(s) 23, 104, 153
HapII CCGG 1 cut(s) 14
Hin1II CATG 1 cut(s) 82
HinfI GANTC 3 cut(s) 9, 56, 163
HpaII CCGG 1 cut(s) 14
Hpy188III TCNNGA 1 cut(s) 53
HpyAV CCTTC 2 cut(s) 70, 141
HpyCH4V TGCA 1 cut(s) 111
Hsp92II CATG 1 cut(s) 82
Kzo9I GATC 1 cut(s) 182
LmnI GCTCC 1 cut(s) 16
LpnPI CCDG 1 cut(s) 27
MaeI CTAG 3 cut(s) 23, 104, 153
MaeIII GTNAC 2 cut(s) 85, 139
MalI GATC 1 cut(s) 184
MboI GATC 1 cut(s) 182
MflI RGATCY 1 cut(s) 182
MhlI GDGCHC 1 cut(s) 126
MluCI AATT 1 cut(s) 223
MlyI GAGTC 1 cut(s) 18
MmeI TCCRAC 1 cut(s) 92
MnlI CCTC 2 cut(s) 30, 164
MseI TTAA 1 cut(s) 218
MspI CCGG 1 cut(s) 14
MspR9I CCNGG 1 cut(s) 14
NciI CCSGG 1 cut(s) 14
NdeII GATC 1 cut(s) 182
NlaIII CATG 1 cut(s) 82
NlaIV GGNNCC 1 cut(s) 18
NmuCI GTSAC 2 cut(s) 85, 139
NspI RCATGY 1 cut(s) 82
PciI ACATGT 1 cut(s) 78
PfeI GAWTC 2 cut(s) 56, 163
PfoI TCCNGGA 1 cut(s) 12
PleI GAGTC 1 cut(s) 17
PpsI GAGTC 1 cut(s) 17
PscI ACATGT 1 cut(s) 78
PshBI ATTAAT 1 cut(s) 218
Psp124BI GAGCTC 1 cut(s) 126
PspN4I GGNNCC 1 cut(s) 18
PsuI RGATCY 1 cut(s) 182
SacI GAGCTC 1 cut(s) 126
SaqAI TTAA 1 cut(s) 218
Sau3AI GATC 1 cut(s) 182
SchI GAGTC 1 cut(s) 18
ScrFI CCNGG 1 cut(s) 14
SduI GDGCHC 1 cut(s) 126
SetI ASST 3 cut(s) 105, 126, 154
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
Sse9I AATT 1 cut(s) 223
SspMI CTAG 3 cut(s) 23, 104, 153
SstI GAGCTC 1 cut(s) 126
StyD4I CCNGG 1 cut(s) 12
TasI AATT 1 cut(s) 223
TfiI GAWTC 2 cut(s) 56, 163
Tru1I TTAA 1 cut(s) 218
Tru9I TTAA 1 cut(s) 218
TseFI GTSAC 2 cut(s) 85, 139
Tsp45I GTSAC 2 cut(s) 85, 139
VspI ATTAAT 1 cut(s) 218
XceI RCATGY 1 cut(s) 82
XspI CTAG 3 cut(s) 23, 104, 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.