pycom14g05580

Chaperone protein DNAj

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
5383780 .. 5388606
4827 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1473 bp
ATGAAGTATTATCACTCTTTTTCCAGTCAATCAAAATTCTTCCTACTAATTTGTAAATATTACGCGGCAATTGCGCGTCTCCGCGTGGGGACGTGGGAAGGGGAATCTTTTTATTTATTTCGATTATTATTTTCTCTTATCCAACTTTTCTTCTTCCTCGTCCTCTATTTTTCTTCTCTATTTTTATTTTTATTTTTATTATTTTTGGCTCCTCCCTCCAAACTGCGAAGCGAAGATTTTGACCGATCGGAAGAAATGGTCAAGGAAACGGAGTACTACGACGTCCTCGGCGTGAGCCCGTCCGCCACCGAGGCGGAGATCAAGAAAGCTTATTACATGAAGGCAAGGCAGGTTCATCCAGATAAAAACCCAAATGATCCACTTGCAGCACAAAATTTTCAGGTTTTGGGAGAAGCTTACCAAGTGTTAAGCGACCCAAGCCAACGCCAAGCGTATGATGCTAATGGAAAATCAGGGATTTCAACTGACGCAATTATTGATCCTGCAGCGATCTTCGCCATGCTTTTTGGTAGTGAGCTTTTCGAGGAATATATTGGACAGCTAGCCATGGCATCAATGGCTTCCCTAGATATTTTCACAGAAGGCGAACAGTTTGATCCCAAAAAGTTGCAAGAGAAAATGCGGGTTGTTCAAAAGGAAAGAGAAGAAAAGCTTGCAGAAACACTAAAAAATCGACTCAACCAATATGTGCAAGGCAACAAAGAGGAATTTGTTAGTCATGCTGAAGCTGAAGTTGCAAGGCTTTCCAATGCAGCCTATGGTGTTGATATGTTGAATACGATTGGCTACATCTATGCCAGACAATCAGCAAAGGAGCTAGGCAAGAAAGCAATATATTTGGGCGTGCCATTTGTTGCAGAGTGGTTTAGAAATAAAGGGCATTTCATTAAATCCCAAGTAACAGCAGCAACAGGTGCAATTGCTTTGATCCAGCTGCAGGAAGACATGAAAAAGCAGCTAAGTGCAGAAGGAAATTATACAGAGGAAGAGCTCGAAGAATACATGCAATCTCACAAGAAGTTGATGATTGATTCCCTGTGGAAGCTTAATGTGGCTGATATTGAGGCCACTCTTTCTCGTGTTTGTCAGATGGTTCTTCAAGACAGCAATGCCAAGAAAGAGGAACTCCGTGCGCGGGCAAAGGGGTTGAAAACTCTTGGCAGAATCTTCCAGAGAACTAAGTCAACCGGTGGGAATGATGGTGAACCTGCACAAAATAGTAGAGTCCATAAACTGAATGGAAGTGAATCAAGCAATGATACCTCGTCTCCTATAACAACACCAAGGTCCTCATTTCTTGACGAGCCATCTTACACTGCATTTGAGCCACAGGTGTCACAGAGCCCCTATGTGGAAGCCCCCCAAATTGCCGGTGCACAGTTGAACTATCACTTCCCAAGGCCAACTGCACCACCTGGTGCCCAGAGACATTCTTCCATTGGCAGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

491

Amino Acids

55.39

Weight (kDa)

6.02

Isoelectric Point (pI)

49.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 91 - 153 1.5e-25 DnaJ domain
DnaJ-X PF14308 218 - 411 7e-56 X-domain of DnaJ-containing
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 285
Acc36I ACCTGC 2 cut(s) 340, 1237
AccB1I GGYRCC 1 cut(s) 1439
AccII CGCG 4 cut(s) 65, 76, 84, 1156
AciI CCGC 6 cut(s) 65, 82, 303, 314, 643, 1156
AclWI GGATC 4 cut(s) 371, 494, 611, 943
AcsI RAATTY 3 cut(s) 35, 394, 728
AcuI CTGAAG 2 cut(s) 765, 771
AcyI GRCGYC 1 cut(s) 282
AdeI CACNNNGTG 1 cut(s) 1439
AfaI GTAC 1 cut(s) 275
AfiI CCNNNNNNNGG 4 cut(s) 958, 1156, 1372, 1464
AgeI ACCGGT 1 cut(s) 1208
AgsI TTSAA 6 cut(s) 483, 653, 796, 1121, 1171, 1405
AjiI CACGTC 1 cut(s) 93
AjnI CCWGG 1 cut(s) 1435
Alw21I GWGCWC 2 cut(s) 1014, 1399
Alw26I GTCTC 3 cut(s) 83, 1293, 1441
Alw44I GTGCAC 1 cut(s) 1395
AlwI GGATC 4 cut(s) 371, 494, 611, 943
AoxI GGCC 2 cut(s) 1086, 1421
ApaLI GTGCAC 1 cut(s) 1395
ApeKI GCWGC 6 cut(s) 386, 506, 773, 926, 955, 976
ApoI RAATTY 3 cut(s) 35, 394, 728
AsiGI ACCGGT 1 cut(s) 1208
AspLEI GCGC 2 cut(s) 76, 1156
AspS9I GGNCC 1 cut(s) 1308
AsuHPI GGTGA 1 cut(s) 1235
AsuNHI GCTAGC 1 cut(s) 562
AvaII GGWCC 1 cut(s) 1308
BaeGI GKGCMC 2 cut(s) 1399, 1444
BanI GGYRCC 1 cut(s) 1439
BanII GRGCYC 3 cut(s) 299, 1014, 1367
BauI CACGAG 1 cut(s) 1098
BbsI GAAGAC 1 cut(s) 969
Bbv12I GWGCWC 2 cut(s) 1014, 1399
BbvI GCAGC 6 cut(s) 398, 518, 785, 938, 942, 988
BccI CCATC 3 cut(s) 1105, 1214, 1336
BciT130I CCWGG 1 cut(s) 1437
BcoDI GTCTC 3 cut(s) 83, 1293, 1441
BfaI CTAG 3 cut(s) 563, 587, 839
BfmI CTRYAG 2 cut(s) 504, 956
BfuAI ACCTGC 2 cut(s) 340, 1237
BglI GCCNNNNNGGC 1 cut(s) 311
BisI GCNGC 7 cut(s) 66, 387, 507, 774, 927, 956, 977
BlsI GCNGC 7 cut(s) 67, 388, 508, 775, 928, 957, 978
BmcAI AGTACT 1 cut(s) 275
Bme1390I CCNGG 1 cut(s) 1437
Bme18I GGWCC 1 cut(s) 1308
BmgBI CACGTC 1 cut(s) 93
BmgT120I GGNCC 1 cut(s) 1308
BmiI GGNNCC 2 cut(s) 210, 1441
BmrFI CCNGG 1 cut(s) 1437
BmsI GCATC 2 cut(s) 448, 581
BmtI GCTAGC 1 cut(s) 566
BpiI GAAGAC 1 cut(s) 969
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 5 cut(s) 286, 309, 567, 1304, 1418
BsaWI WCCGGW 1 cut(s) 1208
BsaXI ACNNNNNCTCC 2 cut(s) 1273, 1303
Bsc4I CCNNNNNNNGG 4 cut(s) 958, 1156, 1372, 1464
Bse118I RCCGGY 2 cut(s) 1208, 1391
Bse1I ACTGG 1 cut(s) 24
Bse3DI GCAATG 2 cut(s) 1135, 1282
BseBI CCWGG 1 cut(s) 1437
BseDI CCNNGG 5 cut(s) 286, 309, 567, 1304, 1418
BseGI GGATG 1 cut(s) 355
BseLI CCNNNNNNNGG 4 cut(s) 958, 1156, 1372, 1464
BseMI GCAATG 2 cut(s) 1135, 1282
BseNI ACTGG 1 cut(s) 24
BseRI GAGGAG 1 cut(s) 201
BseSI GKGCMC 2 cut(s) 1399, 1444
BseXI GCAGC 6 cut(s) 398, 518, 785, 938, 942, 988
BsgI GTGCAG 3 cut(s) 1005, 1215, 1413
Bsh1236I CGCG 4 cut(s) 65, 76, 84, 1156
Bsh1285I CGRYCG 1 cut(s) 248
BshFI GGCC 2 cut(s) 1088, 1423
BshNI GGYRCC 1 cut(s) 1439
BshTI ACCGGT 1 cut(s) 1208
BsiEI CGRYCG 1 cut(s) 248
BsiHKAI GWGCWC 2 cut(s) 1014, 1399
BsiSI CCGG 2 cut(s) 1209, 1392
BslFI GGGAC 1 cut(s) 103
BslI CCNNNNNNNGG 4 cut(s) 958, 1156, 1372, 1464
BsmAI GTCTC 3 cut(s) 83, 1293, 1441
BsmBI CGTCTC 2 cut(s) 83, 1293
BsmFI GGGAC 1 cut(s) 103
BsnI GGCC 2 cut(s) 1088, 1423
Bsp1286I GDGCHC 5 cut(s) 299, 1014, 1367, 1399, 1444
Bsp143I GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
Bsp19I CCATGG 1 cut(s) 567
BspACI CCGC 6 cut(s) 65, 82, 303, 314, 643, 1156
BspANI GGCC 2 cut(s) 1088, 1423
BspFNI CGCG 4 cut(s) 65, 76, 84, 1156
BspLI GGNNCC 2 cut(s) 210, 1441
BspMAI CTGCAG 2 cut(s) 508, 960
BspMI ACCTGC 2 cut(s) 340, 1237
BspOI GCTAGC 1 cut(s) 566
BspPI GGATC 4 cut(s) 371, 494, 611, 943
BspQI GCTCTTC 1 cut(s) 1002
BspT107I GGYRCC 1 cut(s) 1439
BsrDI GCAATG 2 cut(s) 1135, 1282
BsrFI RCCGGY 2 cut(s) 1208, 1391
BsrI ACTGG 1 cut(s) 24
BssAI RCCGGY 2 cut(s) 1208, 1391
BssECI CCNNGG 5 cut(s) 286, 309, 567, 1304, 1418
BssMI GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
BssNI GRCGYC 1 cut(s) 282
BssSI CACGAG 1 cut(s) 1098
BssT1I CCWWGG 3 cut(s) 567, 1304, 1418
Bst2BI CACGAG 1 cut(s) 1098
Bst2UI CCWGG 1 cut(s) 1437
Bst4CI ACNGT 2 cut(s) 612, 1401
Bst6I CTCTTC 1 cut(s) 1002
BstACI GRCGYC 1 cut(s) 282
BstAPI GCANNNNNTGC 1 cut(s) 935
BstC8I GCNNGC 4 cut(s) 564, 675, 866, 1158
BstDEI CTNAG 2 cut(s) 980, 1200
BstDSI CCRYGG 1 cut(s) 567
BstF5I GGATG 1 cut(s) 355
BstFNI CGCG 4 cut(s) 65, 76, 84, 1156
BstHHI GCGC 2 cut(s) 76, 1156
BstKTI GATC 7 cut(s) 248, 321, 379, 502, 513, 619, 951
BstMAI GTCTC 3 cut(s) 83, 1293, 1441
BstMBI GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
BstMCI CGRYCG 1 cut(s) 248
BstMWI GCNNNNNNNGC 8 cut(s) 71, 311, 438, 458, 515, 578, 755, 935
BstNI CCWGG 1 cut(s) 1437
BstNSI RCATGY 1 cut(s) 1027
BstSCI CCNGG 1 cut(s) 1435
BstSFI CTRYAG 2 cut(s) 504, 956
BstSLI GKGCMC 2 cut(s) 1399, 1444
BstUI CGCG 4 cut(s) 65, 76, 84, 1156
BstV1I GCAGC 6 cut(s) 398, 518, 785, 938, 942, 988
BstV2I GAAGAC 1 cut(s) 969
BsuRI GGCC 2 cut(s) 1088, 1423
BtgI CCRYGG 1 cut(s) 567
BtrI CACGTC 1 cut(s) 93
BtsCI GGATG 1 cut(s) 355
BtsI GCAGTG 1 cut(s) 1335
BtsIMutI CAGTG 1 cut(s) 1335
BveI ACCTGC 2 cut(s) 340, 1237
Cac8I GCNNGC 4 cut(s) 564, 675, 866, 1158
CfoI GCGC 2 cut(s) 76, 1156
Cfr10I RCCGGY 2 cut(s) 1208, 1391
Cfr13I GGNCC 1 cut(s) 1308
CseI GACGC 2 cut(s) 65, 497
CsiI ACCWGGT 1 cut(s) 1435
Csp6I GTAC 1 cut(s) 274
CspAI ACCGGT 1 cut(s) 1208
CviAII CATG 6 cut(s) 337, 520, 568, 740, 967, 1024
CviQI GTAC 1 cut(s) 274
DdeI CTNAG 2 cut(s) 980, 1200
DpnI GATC 7 cut(s) 247, 320, 378, 501, 512, 618, 950
DpnII GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
DraIII CACNNNGTG 1 cut(s) 1439
Eam1104I CTCTTC 1 cut(s) 1002
EarI CTCTTC 1 cut(s) 1002
EciI GGCGGA 2 cut(s) 292, 329
Ecl136II GAGCTC 1 cut(s) 1012
Eco130I CCWWGG 3 cut(s) 567, 1304, 1418
Eco24I GRGCYC 3 cut(s) 299, 1014, 1367
Eco47I GGWCC 1 cut(s) 1308
Eco53kI GAGCTC 1 cut(s) 1012
Eco57I CTGAAG 2 cut(s) 765, 771
EcoICRI GAGCTC 1 cut(s) 1012
EcoO109I RGGNCCY 1 cut(s) 1308
EcoRII CCWGG 1 cut(s) 1435
EcoT14I CCWWGG 3 cut(s) 567, 1304, 1418
EcoT38I GRGCYC 3 cut(s) 299, 1014, 1367
ErhI CCWWGG 3 cut(s) 567, 1304, 1418
Esp3I CGTCTC 2 cut(s) 83, 1293
FaeI CATG 6 cut(s) 340, 523, 571, 743, 970, 1027
FalI AAGNNNNNCTT 2 cut(s) 657, 689
FaqI GGGAC 1 cut(s) 103
FatI CATG 6 cut(s) 336, 519, 567, 739, 966, 1023
FauI CCCGC 2 cut(s) 636, 1149
Fnu4HI GCNGC 7 cut(s) 66, 387, 507, 774, 927, 956, 977
FokI GGATG 1 cut(s) 342
FriOI GRGCYC 3 cut(s) 299, 1014, 1367
Fsp4HI GCNGC 7 cut(s) 66, 387, 507, 774, 927, 956, 977
FspBI CTAG 3 cut(s) 563, 587, 839
GlaI GCGC 2 cut(s) 75, 1155
GluI GCNGC 7 cut(s) 66, 387, 507, 774, 927, 956, 977
HaeIII GGCC 2 cut(s) 1088, 1423
HapII CCGG 2 cut(s) 1209, 1392
HgaI GACGC 2 cut(s) 65, 497
HhaI GCGC 2 cut(s) 76, 1156
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 6 cut(s) 340, 523, 571, 743, 970, 1027
Hin6I GCGC 2 cut(s) 74, 1154
HinP1I GCGC 2 cut(s) 74, 1154
HincII GTYRAC 1 cut(s) 1206
HindII GTYRAC 1 cut(s) 1206
HindIII AAGCTT 4 cut(s) 327, 414, 671, 1064
HinfI GANTC 6 cut(s) 104, 696, 1052, 1185, 1245, 1268
HpaII CCGG 2 cut(s) 1209, 1392
HphI GGTGA 1 cut(s) 1235
Hpy166II GTNNAC 3 cut(s) 1206, 1226, 1397
Hpy188I TCNGA 2 cut(s) 250, 1110
Hpy188III TCNNGA 5 cut(s) 322, 359, 1121, 1192, 1319
Hpy8I GTNNAC 3 cut(s) 1206, 1226, 1397
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 4 cut(s) 92, 334, 596, 983
HpyCH4III ACNGT 2 cut(s) 612, 1401
HpyCH4IV ACGT 2 cut(s) 92, 282
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 311, 438, 458, 515, 578, 755, 935
HpyF3I CTNAG 2 cut(s) 980, 1200
HpySE526I ACGT 2 cut(s) 92, 282
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 6 cut(s) 340, 523, 571, 743, 970, 1027
HspAI GCGC 2 cut(s) 74, 1154
Kzo9I GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
LguI GCTCTTC 1 cut(s) 1002
LmnI GCTCC 2 cut(s) 214, 835
Lsp1109I GCAGC 6 cut(s) 398, 518, 785, 938, 942, 988
LweI GCATC 2 cut(s) 448, 581
MabI ACCWGGT 1 cut(s) 1435
MaeI CTAG 3 cut(s) 563, 587, 839
MaeII ACGT 2 cut(s) 92, 282
MaeIII GTNAC 2 cut(s) 919, 1356
MalI GATC 7 cut(s) 247, 320, 378, 501, 512, 618, 950
MboI GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
MfeI CAATTG 2 cut(s) 69, 939
MhlI GDGCHC 5 cut(s) 299, 1014, 1367, 1399, 1444
MluCI AATT 9 cut(s) 35, 48, 69, 394, 492, 728, 939, 994, 1386
MlyI GAGTC 2 cut(s) 690, 1254
MmeI TCCRAC 1 cut(s) 166
MseI TTAA 3 cut(s) 428, 909, 1068
MspA1I CMGCKG 1 cut(s) 955
MspI CCGG 2 cut(s) 1209, 1392
MspR9I CCNGG 1 cut(s) 1437
MunI CAATTG 2 cut(s) 69, 939
MvaI CCWGG 1 cut(s) 1437
MvnI CGCG 4 cut(s) 65, 76, 84, 1156
MwoI GCNNNNNNNGC 8 cut(s) 71, 311, 438, 458, 515, 578, 755, 935
NcoI CCATGG 1 cut(s) 567
NdeII GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
NheI GCTAGC 1 cut(s) 562
NlaIII CATG 6 cut(s) 340, 523, 571, 743, 970, 1027
NlaIV GGNNCC 2 cut(s) 210, 1441
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 1 cut(s) 1356
NspI RCATGY 1 cut(s) 1027
PciSI GCTCTTC 1 cut(s) 1002
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PfeI GAWTC 4 cut(s) 104, 1052, 1185, 1268
PinAI ACCGGT 1 cut(s) 1208
PkrI GCNGC 7 cut(s) 67, 388, 508, 775, 928, 957, 978
Ple19I CGATCG 1 cut(s) 248
PleI GAGTC 2 cut(s) 690, 1253
PpsI GAGTC 2 cut(s) 690, 1253
PpuMI RGGWCCY 1 cut(s) 1308
Psp124BI GAGCTC 1 cut(s) 1014
Psp5II RGGWCCY 1 cut(s) 1308
Psp6I CCWGG 1 cut(s) 1435
PspGI CCWGG 1 cut(s) 1435
PspN4I GGNNCC 2 cut(s) 210, 1441
PspPI GGNCC 1 cut(s) 1308
PspPPI RGGWCCY 1 cut(s) 1308
PstI CTGCAG 2 cut(s) 508, 960
PvuI CGATCG 1 cut(s) 248
PvuII CAGCTG 1 cut(s) 955
RsaI GTAC 1 cut(s) 275
RsaNI GTAC 1 cut(s) 274
SacI GAGCTC 1 cut(s) 1014
SapI GCTCTTC 1 cut(s) 1002
SaqAI TTAA 3 cut(s) 428, 909, 1068
SatI GCNGC 7 cut(s) 66, 387, 507, 774, 927, 956, 977
Sau3AI GATC 7 cut(s) 245, 318, 376, 499, 510, 616, 948
Sau96I GGNCC 1 cut(s) 1308
ScaI AGTACT 1 cut(s) 275
SchI GAGTC 2 cut(s) 690, 1254
ScrFI CCNGG 1 cut(s) 1437
SduI GDGCHC 5 cut(s) 299, 1014, 1367, 1399, 1444
SexAI ACCWGGT 1 cut(s) 1435
SfaNI GCATC 2 cut(s) 448, 581
SfcI CTRYAG 2 cut(s) 504, 956
SinI GGWCC 1 cut(s) 1308
Sse9I AATT 9 cut(s) 35, 48, 69, 394, 492, 728, 939, 994, 1386
SsiI CCGC 6 cut(s) 65, 82, 303, 314, 643, 1156
SspI AATATT 1 cut(s) 59
SspMI CTAG 3 cut(s) 563, 587, 839
SstI GAGCTC 1 cut(s) 1014
StyD4I CCNGG 1 cut(s) 1435
StyI CCWWGG 3 cut(s) 567, 1304, 1418
TaaI ACNGT 2 cut(s) 612, 1401
TaiI ACGT 2 cut(s) 95, 285
TaqI TCGA 4 cut(s) 121, 543, 694, 1014
TaqII GACCGA 1 cut(s) 258
TasI AATT 9 cut(s) 35, 48, 69, 394, 492, 728, 939, 994, 1386
TatI WGTACW 1 cut(s) 273
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 4 cut(s) 104, 1052, 1185, 1268
Tru1I TTAA 3 cut(s) 428, 909, 1068
Tru9I TTAA 3 cut(s) 428, 909, 1068
TscAI CASTG 1 cut(s) 1342
TseFI GTSAC 1 cut(s) 1356
TseI GCWGC 6 cut(s) 386, 506, 773, 926, 955, 976
Tsp45I GTSAC 1 cut(s) 1356
TspDTI ATGAA 5 cut(s) 17, 344, 353, 895, 983
TspGWI ACGGA 2 cut(s) 284, 1139
TspRI CASTG 1 cut(s) 1342
VneI GTGCAC 1 cut(s) 1395
VpaK11BI GGWCC 1 cut(s) 1308
XapI RAATTY 3 cut(s) 35, 394, 728
XceI RCATGY 1 cut(s) 1027
XcmI CCANNNNNNNNNTGG 2 cut(s) 574, 1256
XspI CTAG 3 cut(s) 563, 587, 839
ZraI GACGTC 1 cut(s) 283
ZrmI AGTACT 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.